AT2G35615

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
14959386 .. 14960828
1443 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G35615.1

Sequence Viewer

Length: 1344 bp
ATGGCAACCCAAATTCTTCTCTGTTTCTTCCTCTTCTTCTCGGTGACTCTCTCTTCATCGGGTCACCCAAAAAACTTCAGTGTTGAGCTGATCCACCGTGACTCTCCCCTTTCCCCAATCTACAACCCACAAATCACCGTCACTGATCGCCTCAACGCTGCTTTCCTCCGCTCAGTCTCTCGTTCCCGCCGCTTCAACCACCAACTATCCCAAACCGATCTCCAATCCGGTTTAATCGGAGCAGACGGCGAGTTTTTCATGAGTATCACCATCGGTACTCCACCAATAAAGGTTTTTGCGATCGCTGACACAGGAAGTGACCTAACTTGGGTCCAATGTAAGCCTTGTCAACAATGTTACAAAGAAAACGGTCCAATCTTCGACAAGAAGAAATCCTCTACTTATAAGAGCGAGCCTTGTGACTCACGTAACTGCCAGGCCTTGTCCAGTACGGAACGGGGATGCGATGAATCCAACAATATATGCAAGTACCGTTACTCTTACGGTGATCAGTCGTTCAGCAAAGGAGACGTTGCCACGGAAACTGTCTCTATTGACTCTGCTTCAGGGTCCCCTGTTTCTTTTCCTGGTACTGTCTTCGGTTGTGGCTACAATAACGGTGGTACCTTCGACGAGACTGGTTCTGGGATTATCGGTCTAGGTGGTGGTCATTTATCACTAATCTCCCAGCTCGGTTCGTCGATTTCGAAGAAATTTTCTTATTGCTTGTCTCACAAGTCAGCTACCACGAATGGCACAAGCGTCATAAACCTAGGCACTAACTCGATTCCTTCAAGTCTAAGCAAAGACTCCGGCGTGGTATCAACTCCGTTGGTCGATAAAGAGCCTCTTACTTACTACTACTTGACGCTTGAAGCCATCTCCGTCGGGAAGAAAAAGATTCCTTACACCGGAAGCTCGTATAACCCAAACGACGACGGAATACTCTCGGAGACATCTGGAAACATCATCATCGACTCTGGAACGACACTGACCCTCCTCGAAGCTGGTTTCTTTGACAAATTTAGCTCGGCGGTGGAGGAATCAGTGACCGGAGCCAAGCGCGTGAGTGATCCACAAGGGCTTTTGTCTCACTGTTTCAAATCCGGAAGTGCAGAGATCGGTTTGCCGGAGATAACGGTGCATTTCACGGGTGCAGATGTGAGGCTGAGTCCGATCAACGCATTCGTGAAACTGAGTGAAGACATGGTTTGCTTGAGTATGGTTCCGACCACCGAGGTTGCCATCTATGGGAACTTTGCTCAGATGGATTTCCTAGTTGGGTATGACTTGGAGACGAGGACGGTGTCGTTTCAACACATGGATTGCTCTGCGAATTTGTGA

Protein Analysis

447

Amino Acids

48.09

Weight (kDa)

5.33

Isoelectric Point (pI)

34.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 85 - 259 2.1e-55 Xylanase inhibitor N-terminal
Asp PF00026 85 - 438 3.4e-15 Eukaryotic aspartyl protease
TAXi_C PF14541 287 - 439 5.6e-25 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 405
Acc65I GGTACC 1 cut(s) 623
AccB1I GGYRCC 1 cut(s) 623
AccBSI CCGCTC 1 cut(s) 171
AccII CGCG 1 cut(s) 1065
AccIII TCCGGA 1 cut(s) 1106
AciI CCGC 4 cut(s) 169, 187, 190, 1034
AclWI GGATC 2 cut(s) 85, 1067
AcsI RAATTY 4 cut(s) 12, 713, 1022, 1336
AcuI CTGAAG 2 cut(s) 61, 549
AfaI GTAC 5 cut(s) 277, 451, 491, 592, 625
AfiI CCNNNNNNNGG 3 cut(s) 328, 911, 1251
AgsI TTSAA 5 cut(s) 196, 795, 875, 1102, 1316
AjnI CCWGG 2 cut(s) 435, 586
AluBI AGCT 6 cut(s) 88, 691, 743, 918, 1007, 1029
AluI AGCT 6 cut(s) 88, 691, 743, 918, 1007, 1029
Alw26I GTCTC 8 cut(s) 181, 522, 553, 629, 735, 947, 1095, 1289
AlwI GGATC 2 cut(s) 85, 1067
Aor13HI TCCGGA 1 cut(s) 1106
AoxI GGCC 1 cut(s) 438
ApeKI GCWGC 1 cut(s) 158
ApoI RAATTY 4 cut(s) 12, 713, 1022, 1336
AsiSI GCGATCGC 1 cut(s) 303
Asp718I GGTACC 1 cut(s) 623
AspA2I CCTAGG 1 cut(s) 772
AspLEI GCGC 1 cut(s) 1065
AspS9I GGNCC 3 cut(s) 331, 371, 570
AsuHPI GGTGA 5 cut(s) 55, 56, 127, 259, 518
AsuII TTCGAA 1 cut(s) 707
AvaII GGWCC 3 cut(s) 331, 371, 570
AvrII CCTAGG 1 cut(s) 772
BaeI ACNNNNGTAYC 2 cut(s) 607, 640
BanI GGYRCC 1 cut(s) 623
BbsI GAAGAC 2 cut(s) 589, 1209
BbvI GCAGC 1 cut(s) 145
BccI CCATC 4 cut(s) 278, 887, 1253, 1261
BceAI ACGGC 1 cut(s) 262
BciT130I CCWGG 2 cut(s) 437, 588
BclI TGATCA 1 cut(s) 508
BcoDI GTCTC 8 cut(s) 181, 522, 553, 629, 735, 947, 1095, 1289
BfaI CTAG 3 cut(s) 659, 773, 1277
BisI GCNGC 2 cut(s) 159, 190
BlnI CCTAGG 1 cut(s) 772
BlsI GCNGC 2 cut(s) 160, 191
Bme1390I CCNGG 2 cut(s) 437, 588
Bme18I GGWCC 3 cut(s) 331, 371, 570
BmgT120I GGNCC 3 cut(s) 331, 371, 570
BmiI GGNNCC 6 cut(s) 332, 571, 572, 625, 1057, 1227
BmrFI CCNGG 2 cut(s) 437, 588
BmsI GCATC 1 cut(s) 452
BpiI GAAGAC 2 cut(s) 589, 1209
Bpu14I TTCGAA 1 cut(s) 707
BpuEI CTTGAG 1 cut(s) 1237
BsaAI YACGTR 1 cut(s) 428
BsaJI CCNNGG 3 cut(s) 537, 772, 1236
BsaWI WCCGGW 4 cut(s) 227, 911, 1052, 1106
BsaXI ACNNNNNCTCC 2 cut(s) 981, 1011
Bsc4I CCNNNNNNNGG 3 cut(s) 328, 911, 1251
Bse1I ACTGG 2 cut(s) 447, 643
BseAI TCCGGA 1 cut(s) 1106
BseBI CCWGG 2 cut(s) 437, 588
BseDI CCNNGG 3 cut(s) 537, 772, 1236
BseGI GGATG 1 cut(s) 467
BseLI CCNNNNNNNGG 3 cut(s) 328, 911, 1251
BseMII CTCAG 4 cut(s) 186, 1160, 1187, 1277
BseNI ACTGG 2 cut(s) 447, 643
BseRI GAGGAG 1 cut(s) 989
BseXI GCAGC 1 cut(s) 145
BseYI CCCAGC 1 cut(s) 687
BsgI GTGCAG 2 cut(s) 1134, 1176
Bsh1236I CGCG 1 cut(s) 1065
Bsh1285I CGRYCG 1 cut(s) 303
BshFI GGCC 1 cut(s) 440
BshNI GGYRCC 1 cut(s) 623
BsiEI CGRYCG 1 cut(s) 303
BsiSI CCGG 6 cut(s) 228, 813, 912, 1053, 1107, 1130
BslFI GGGAC 1 cut(s) 556
BslI CCNNNNNNNGG 3 cut(s) 328, 911, 1251
BsmAI GTCTC 8 cut(s) 181, 522, 553, 629, 735, 947, 1095, 1289
BsmBI CGTCTC 2 cut(s) 522, 1289
BsmFI GGGAC 1 cut(s) 556
BsmI GAATGC 1 cut(s) 1184
BsnI GGCC 1 cut(s) 440
Bsp119I TTCGAA 1 cut(s) 707
Bsp13I TCCGGA 1 cut(s) 1106
Bsp143I GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
BspACI CCGC 4 cut(s) 169, 187, 190, 1034
BspANI GGCC 1 cut(s) 440
BspCNI CTCAG 4 cut(s) 185, 1161, 1188, 1276
BspEI TCCGGA 1 cut(s) 1106
BspFNI CGCG 1 cut(s) 1065
BspHI TCATGA 1 cut(s) 258
BspLI GGNNCC 6 cut(s) 332, 571, 572, 625, 1057, 1227
BspPI GGATC 2 cut(s) 85, 1067
BspT104I TTCGAA 1 cut(s) 707
BspT107I GGYRCC 1 cut(s) 623
BsrBI CCGCTC 1 cut(s) 171
BsrI ACTGG 2 cut(s) 447, 643
BssECI CCNNGG 3 cut(s) 537, 772, 1236
BssMI GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
BssT1I CCWWGG 1 cut(s) 772
Bst2UI CCWGG 2 cut(s) 437, 588
Bst6I CTCTTC 2 cut(s) 38, 58
BstBAI YACGTR 1 cut(s) 428
BstBI TTCGAA 1 cut(s) 707
BstC8I GCNNGC 1 cut(s) 413
BstDEI CTNAG 5 cut(s) 172, 800, 1169, 1196, 1263
BstDSI CCRYGG 1 cut(s) 537
BstEII GGTNACC 1 cut(s) 62
BstF5I GGATG 1 cut(s) 467
BstFNI CGCG 1 cut(s) 1065
BstHHI GCGC 1 cut(s) 1065
BstKTI GATC 8 cut(s) 93, 148, 220, 303, 511, 1075, 1122, 1179
BstMAI GTCTC 8 cut(s) 181, 522, 553, 629, 735, 947, 1095, 1289
BstMBI GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
BstMCI CGRYCG 1 cut(s) 303
BstNI CCWGG 2 cut(s) 437, 588
BstPI GGTNACC 1 cut(s) 62
BstSCI CCNGG 2 cut(s) 435, 586
BstUI CGCG 1 cut(s) 1065
BstV1I GCAGC 1 cut(s) 145
BstV2I GAAGAC 2 cut(s) 589, 1209
BsuRI GGCC 1 cut(s) 440
BtgI CCRYGG 1 cut(s) 537
BtgZI GCGATG 1 cut(s) 480
BtsCI GGATG 1 cut(s) 467
BtsIMutI CAGTG 5 cut(s) 85, 141, 989, 1053, 1093
Cac8I GCNNGC 1 cut(s) 413
CciI TCATGA 1 cut(s) 258
CfoI GCGC 1 cut(s) 1065
Cfr13I GGNCC 3 cut(s) 331, 371, 570
CseI GACGC 2 cut(s) 751, 877
Csp6I GTAC 5 cut(s) 276, 450, 490, 591, 624
CspCI CAANNNNNGTGG 4 cut(s) 601, 636, 1222, 1257
CviAII CATG 3 cut(s) 259, 1207, 1321
CviQI GTAC 5 cut(s) 276, 450, 490, 591, 624
DdeI CTNAG 5 cut(s) 172, 800, 1169, 1196, 1263
DpnI GATC 8 cut(s) 92, 147, 219, 302, 510, 1074, 1121, 1178
DpnII GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
Eam1104I CTCTTC 2 cut(s) 38, 58
EarI CTCTTC 2 cut(s) 38, 58
Eco130I CCWWGG 1 cut(s) 772
Eco147I AGGCCT 1 cut(s) 440
Eco47I GGWCC 3 cut(s) 331, 371, 570
Eco57I CTGAAG 2 cut(s) 61, 549
Eco91I GGTNACC 1 cut(s) 62
EcoO109I RGGNCCY 1 cut(s) 570
EcoO65I GGTNACC 1 cut(s) 62
EcoRII CCWGG 2 cut(s) 435, 586
EcoT14I CCWWGG 1 cut(s) 772
ErhI CCWWGG 1 cut(s) 772
Esp3I CGTCTC 2 cut(s) 522, 1289
FaeI CATG 3 cut(s) 262, 1210, 1324
FalI AAGNNNNNCTT 2 cut(s) 834, 866
FaqI GGGAC 1 cut(s) 556
FatI CATG 3 cut(s) 258, 1206, 1320
FauI CCCGC 1 cut(s) 194
FbaI TGATCA 1 cut(s) 508
Fnu4HI GCNGC 2 cut(s) 159, 190
FokI GGATG 1 cut(s) 474
Fsp4HI GCNGC 2 cut(s) 159, 190
FspBI CTAG 3 cut(s) 659, 773, 1277
GlaI GCGC 1 cut(s) 1064
GluI GCNGC 2 cut(s) 159, 190
GsaI CCCAGC 1 cut(s) 691
HaeIII GGCC 1 cut(s) 440
HapII CCGG 6 cut(s) 228, 813, 912, 1053, 1107, 1130
HgaI GACGC 2 cut(s) 751, 877
HhaI GCGC 1 cut(s) 1065
Hin1II CATG 3 cut(s) 262, 1210, 1324
Hin6I GCGC 1 cut(s) 1063
HinP1I GCGC 1 cut(s) 1063
HincII GTYRAC 1 cut(s) 350
HindII GTYRAC 1 cut(s) 350
HpaII CCGG 6 cut(s) 228, 813, 912, 1053, 1107, 1130
HphI GGTGA 5 cut(s) 55, 56, 127, 259, 518
Hpy166II GTNNAC 1 cut(s) 350
Hpy188I TCNGA 5 cut(s) 239, 952, 1176, 1230, 1266
Hpy188III TCNNGA 6 cut(s) 259, 889, 960, 981, 1107, 1189
Hpy8I GTNNAC 1 cut(s) 350
Hpy99I CGWCG 5 cut(s) 635, 703, 890, 938, 941
HpyAV CCTTC 2 cut(s) 637, 801
HpyCH4IV ACGT 2 cut(s) 427, 531
HpyCH4V TGCA 4 cut(s) 486, 1115, 1144, 1157
HpyF3I CTNAG 5 cut(s) 172, 800, 1169, 1196, 1263
HpySE526I ACGT 2 cut(s) 427, 531
Hsp92II CATG 3 cut(s) 262, 1210, 1324
HspAI GCGC 1 cut(s) 1063
KflI GGGWCCC 1 cut(s) 570
Kpn2I TCCGGA 1 cut(s) 1106
KpnI GGTACC 1 cut(s) 627
Ksp22I TGATCA 1 cut(s) 508
Kzo9I GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
LmnI GCTCC 2 cut(s) 239, 1055
Lsp1109I GCAGC 1 cut(s) 145
LweI GCATC 1 cut(s) 452
MaeI CTAG 3 cut(s) 659, 773, 1277
MaeII ACGT 2 cut(s) 427, 531
MalI GATC 8 cut(s) 92, 147, 219, 302, 510, 1074, 1121, 1178
MbiI CCGCTC 1 cut(s) 171
MboI GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
MluCI AATT 4 cut(s) 12, 713, 1022, 1336
MlyI GAGTC 7 cut(s) 40, 95, 416, 551, 803, 971, 1180
MmeI TCCRAC 2 cut(s) 498, 1253
MroI TCCGGA 1 cut(s) 1106
MseI TTAA 1 cut(s) 233
MspI CCGG 6 cut(s) 228, 813, 912, 1053, 1107, 1130
MspR9I CCNGG 2 cut(s) 437, 588
Mva1269I GAATGC 1 cut(s) 1184
MvaI CCWGG 2 cut(s) 437, 588
MvnI CGCG 1 cut(s) 1065
NdeII GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
NlaIII CATG 3 cut(s) 262, 1210, 1324
NlaIV GGNNCC 6 cut(s) 332, 571, 572, 625, 1057, 1227
NmeAIII GCCGAG 1 cut(s) 1010
NmuCI GTSAC 7 cut(s) 43, 62, 98, 139, 317, 419, 1048
NspV TTCGAA 1 cut(s) 707
PagI TCATGA 1 cut(s) 258
PceI AGGCCT 1 cut(s) 440
PcsI WCGNNNNNNNCGW 1 cut(s) 704
PctI GAATGC 1 cut(s) 1184
PfeI GAWTC 4 cut(s) 470, 787, 901, 1043
PflFI GACNNNGTC 1 cut(s) 1306
PkrI GCNGC 2 cut(s) 160, 191
Ple19I CGATCG 1 cut(s) 303
PleI GAGTC 7 cut(s) 40, 95, 416, 551, 803, 971, 1179
PpsI GAGTC 7 cut(s) 40, 95, 416, 551, 803, 971, 1179
Ppu21I YACGTR 1 cut(s) 428
PpuMI RGGWCCY 1 cut(s) 570
PsiI TTATAA 1 cut(s) 405
Psp5II RGGWCCY 1 cut(s) 570
Psp6I CCWGG 2 cut(s) 435, 586
PspEI GGTNACC 1 cut(s) 62
PspFI CCCAGC 1 cut(s) 687
PspGI CCWGG 2 cut(s) 435, 586
PspN4I GGNNCC 6 cut(s) 332, 571, 572, 625, 1057, 1227
PspPI GGNCC 3 cut(s) 331, 371, 570
PspPPI RGGWCCY 1 cut(s) 570
PsyI GACNNNGTC 1 cut(s) 1306
PvuI CGATCG 1 cut(s) 303
RgaI GCGATCGC 1 cut(s) 303
RsaI GTAC 5 cut(s) 277, 451, 491, 592, 625
RsaNI GTAC 5 cut(s) 276, 450, 490, 591, 624
SaqAI TTAA 1 cut(s) 233
SatI GCNGC 2 cut(s) 159, 190
Sau3AI GATC 8 cut(s) 90, 145, 217, 300, 508, 1072, 1119, 1176
Sau96I GGNCC 3 cut(s) 331, 371, 570
SchI GAGTC 7 cut(s) 40, 95, 416, 551, 803, 971, 1180
ScrFI CCNGG 2 cut(s) 437, 588
SfaAI GCGATCGC 1 cut(s) 303
SfaNI GCATC 1 cut(s) 452
SfuI TTCGAA 1 cut(s) 707
SgfI GCGATCGC 1 cut(s) 303
SinI GGWCC 3 cut(s) 331, 371, 570
SmlI CTYRAG 1 cut(s) 1216
SmoI CTYRAG 1 cut(s) 1216
Sse9I AATT 4 cut(s) 12, 713, 1022, 1336
SseBI AGGCCT 1 cut(s) 440
SsiI CCGC 4 cut(s) 169, 187, 190, 1034
SspMI CTAG 3 cut(s) 659, 773, 1277
StuI AGGCCT 1 cut(s) 440
StyD4I CCNGG 2 cut(s) 435, 586
StyI CCWWGG 1 cut(s) 772
TaiI ACGT 2 cut(s) 430, 534
TaqI TCGA 8 cut(s) 381, 630, 701, 707, 785, 837, 975, 1002
TaqII GACCGA 1 cut(s) 644
TasI AATT 4 cut(s) 12, 713, 1022, 1336
TauI GCSGC 1 cut(s) 192
TfiI GAWTC 4 cut(s) 470, 787, 901, 1043
Tru1I TTAA 1 cut(s) 233
Tru9I TTAA 1 cut(s) 233
TscAI CASTG 5 cut(s) 85, 148, 996, 1053, 1100
TseFI GTSAC 7 cut(s) 43, 62, 98, 139, 317, 419, 1048
TseI GCWGC 1 cut(s) 158
Tsp45I GTSAC 7 cut(s) 43, 62, 98, 139, 317, 419, 1048
TspDTI ATGAA 3 cut(s) 45, 247, 483
TspGWI ACGGA 5 cut(s) 467, 554, 819, 874, 954
TspRI CASTG 5 cut(s) 85, 148, 996, 1053, 1100
Tth111I GACNNNGTC 1 cut(s) 1306
VpaK11BI GGWCC 3 cut(s) 331, 371, 570
XapI RAATTY 4 cut(s) 12, 713, 1022, 1336
XmaJI CCTAGG 1 cut(s) 772
XspI CTAG 3 cut(s) 659, 773, 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.