AT1G52620

pentatricopeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0010927
Physical Location & Seq
Forward (+)
19603796 .. 19606287
2492 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G52620.1

Sequence Viewer

Length: 2460 bp
ATGTCTAAAACCCTTCTCTCTCGCATCAAACCTCTCTCCAATCCTCATGCATCTAATTCCTTCCGATCTCATCTTCCGATTACTCCCCGTATCAAGAAACTAGTCAGCGACACTGTATCCATCCTCAAAACCCAACAAAACTGGTCTCAAATTCTCGACGATTGCTTCGCTGATGAAGAAGTCCGCTTTGTCGACATTTCACCTTTCGTATTCGATCGAATCCAGGATGTTGAAATCGGCGTTAAGCTTTTTGATTGGCTATCGAGTGAGAAGAAAGATGAGTTCTTTTCTAATGGGTTCGCTTGTTCTTCGTTTCTGAAGCTCTTAGCGAGGTATAGGATCTTCAATGAGATTGAAGATGTGTTGGGTAATCTCAGAAACGAAAATGTGAAGCTTACACATGAAGCATTGAGTCATGTTCTTCACGCTTATGCTGAATCTGGAAGTTTAAGTAAAGCAGTGGAGATTTATGATTATGTTGTTGAGTTATATGATTCTGTGCCTGATGTTATTGCTTGTAACTCGTTGTTGAGTTTATTGGTGAAAAGTAGGAGACTTGGAGATGCACGGAAGGTGTATGACGAAATGTGTGATAGAGGTGATAGTGTTGATAATTACAGTACTTGTATATTGGTCAAGGGTATGTGTAATGAAGGAAAGGTAGAAGTAGGTAGAAAGCTGATTGAAGGTCGATGGGGTAAAGGTTGTATTCCGAATATTGTGTTCTACAACACAATCATTGGTGGATACTGCAAGCTGGGCGATATCGAAAATGCGTATTTAGTTTTCAAGGAGTTGAAGTTGAAGGGATTTATGCCTACTTTGGAAACTTTTGGTACAATGATTAACGGGTTCTGCAAGGAAGGGGATTTTGTGGCGAGTGATCGACTTTTGAGTGAAGTGAAAGAAAGGGGTTTAAGGGTTAGTGTTTGGTTCCTTAATAATATCATTGATGCTAAGTATAGGCACGGTTATAAGGTTGATCCTGCTGAGAGTATAGGATGGATAATAGCTAATGACTGCAAGCCTGATGTAGCAACATATAACATTTTGATTAATCGCTTGTGTAAAGAAGGGAAAAAGGAGGTCGCTGTTGGGTTTTTGGATGAAGCATCAAAGAAAGGGTTGATTCCAAACAATTTAAGCTATGCCCCTCTGATACAAGCCTATTGCAAAAGTAAAGAGTATGATATTGCTTCTAAGTTGCTTCTACAGATGGCTGAAAGAGGATGCAAACCAGATATAGTTACGTATGGAATTCTTATCCATGGTCTTGTTGTTTCAGGCCATATGGATGATGCAGTTAATATGAAAGTTAAATTGATAGATAGAGGAGTTTCACCGGATGCCGCCATCTACAATATGTTGATGAGTGGATTGTGCAAGACCGGTAGGTTTTTACCTGCCAAACTCCTCTTCTCGGAGATGCTTGACCGGAATATCTTACCAGATGCTTATGTTTATGCCACGCTCATAGATGGATTCATCAGAAGTGGTGATTTTGATGAGGCAAGGAAAGTTTTCAGTCTCTCAGTCGAAAAGGGTGTGAAGGTTGATGTCGTGCACCACAATGCTATGATAAAAGGGTTTTGCAGATCTGGAATGTTGGATGAGGCATTGGCGTGCATGAATAGGATGAATGAAGAACACCTTGTACCCGATAAGTTTACTTATTCCACAATTATTGACGGATATGTAAAGCAACAGGATATGGCTACTGCCATAAAGATTTTTCGATACATGGAGAAGAATAAATGTAAGCCAAACGTTGTAACATACACATCACTTATCAATGGTTTTTGTTGCCAAGGAGACTTCAAAATGGCTGAAGAGACTTTCAAAGAGATGCAATTGCGGGACCTTGTGCCTAACGTTGTCACCTACACAACACTTATTCGAAGTCTTGCTAAAGAGAGTAGTACCCTTGAAAAAGCAGTTTACTATTGGGAGCTAATGATGACAAACAAATGTGTTCCTAATGAAGTTACCTTCAATTGTCTACTTCAGGGATTTGTGAAGAAAACATCTGGAAAAGTTCTTGCTGAACCGGATGGTTCTAATCATGGACAAAGTTCTCTGTTTTCTGAGTTTTTCCATAGAATGAAATCAGATGGGTGGTCGGACCACGCTGCTGCTTACAATTCTGCCCTTGTTTGTCTCTGTGTACATGGAATGGTGAAGACCGCATGCATGTTTCAGGATAAGATGGTGAAGAAAGGCTTCTCTCCTGATCCTGTTTCATTTGCTGCTATTTTACATGGTTTTTGTGTGGTTGGGAACTCAAAGCAATGGAGGAACATGGACTTCTGCAATCTGGGTGAGAAGGGTCTTGAAGTAGCTGTTAGGTATTCGCAGGTTTTAGAGCAACACTTACCTCAACCAGTGATATGCGAGGCTTCAACTATTTTGCATGCAATGGTTGAAAAAGCTGACACCAAAGAACCGGTAGAATCTCCGTAA

Protein Analysis

819

Amino Acids

92.1

Weight (kDa)

6.67

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 168 - 217 2.8e-11 PPR repeat family
PPR_1 PF12854 234 - 266 2.5e-09 PPR repeat
PPR_2 PF13041 238 - 287 2.7e-15 PPR repeat family
PPR PF01535 241 - 271 1e-06 PPR repeat
PPR_1 PF12854 340 - 370 2e-09 PPR repeat
PPR_2 PF13041 343 - 383 4e-09 PPR repeat family
PPR_3 PF13812 368 - 423 2e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 383 - 425 2.7e-12 PPR repeat family
PPR_1 PF12854 409 - 437 1.6e-06 PPR repeat
PPR_1 PF12854 444 - 476 1.4e-06 PPR repeat
PPR_2 PF13041 448 - 496 2.2e-12 PPR repeat family
TPR_24 PF23276 497 - 561 4.1e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 512 - 567 6e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 514 - 546 6e-09 PPR repeat
PPR_2 PF13041 519 - 567 3.2e-13 PPR repeat family
PPR PF01535 521 - 549 3e-06 PPR repeat
PPR_long PF17177 536 - 674 9.4e-09 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 551 - 582 1.1e-06 PPR repeat
PPR_3 PF13812 554 - 599 3.5e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 556 - 601 1e-16 PPR repeat family
TPR_24 PF23276 570 - 673 9e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 586 - 617 5.8e-12 PPR repeat
PPR_3 PF13812 587 - 633 2.4e-09 Pentatricopeptide repeat domain
PPR PF01535 591 - 619 5.3e-08 PPR repeat
PPR_2 PF13041 591 - 637 2.2e-14 PPR repeat family
PPR_3 PF13812 613 - 673 5.9e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 711 - 756 9.7e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 975
Acc36I ACCTGC 2 cut(s) 1411, 2344
AccI GTMKAC 2 cut(s) 192, 1999
AciI CCGC 4 cut(s) 184, 1350, 1855, 2184
AclI AACGTT 2 cut(s) 1767, 1872
AclWI GGATC 3 cut(s) 347, 977, 2225
AcsI RAATTY 2 cut(s) 150, 1257
AcuI CTGAAG 3 cut(s) 338, 1848, 1988
AfaI GTAC 5 cut(s) 622, 838, 1656, 1921, 2166
AfiI CCNNNNNNNGG 1 cut(s) 1420
AgeI ACCGGT 2 cut(s) 1388, 2443
AhlI ACTAGT 1 cut(s) 100
AjnI CCWGG 1 cut(s) 222
AjuI GAANNNNNNNTTGG 2 cut(s) 1400, 1432
Alw21I GWGCWC 1 cut(s) 1566
Alw26I GTCTC 6 cut(s) 150, 547, 1532, 1806, 1826, 2162
Alw44I GTGCAC 1 cut(s) 1562
AlwI GGATC 3 cut(s) 347, 977, 2225
AoxI GGCC 1 cut(s) 1285
ApaLI GTGCAC 1 cut(s) 1562
ApeKI GCWGC 3 cut(s) 2129, 2132, 2246
ApoI RAATTY 2 cut(s) 150, 1257
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
AseI ATTAAT 1 cut(s) 1056
AsiGI ACCGGT 2 cut(s) 1388, 2443
Asp700I GAANNNNTTC 2 cut(s) 1520, 2219
AspS9I GGNCC 2 cut(s) 1858, 2122
AsuHPI GGTGA 9 cut(s) 192, 553, 611, 1332, 1508, 1870, 2188, 2221, 2330
AsuII TTCGAA 1 cut(s) 1897
AvaII GGWCC 2 cut(s) 1858, 2122
BaeGI GKGCMC 1 cut(s) 1566
BarI GAAGNNNNNNTAC 2 cut(s) 326, 358
BbsI GAAGAC 1 cut(s) 2186
Bbv12I GWGCWC 1 cut(s) 1566
BbvI GCAGC 3 cut(s) 2116, 2119, 2233
BccI CCATC 9 cut(s) 128, 687, 996, 1210, 1361, 1472, 2045, 2105, 2200
BciT130I CCWGG 1 cut(s) 224
BciVI GTATCC 2 cut(s) 127, 740
BcoDI GTCTC 6 cut(s) 150, 547, 1532, 1806, 1826, 2162
BcuI ACTAGT 1 cut(s) 100
BfaI CTAG 1 cut(s) 101
BfmI CTRYAG 1 cut(s) 1211
BfuAI ACCTGC 2 cut(s) 1411, 2344
BfuI GTATCC 2 cut(s) 127, 740
BglII AGATCT 1 cut(s) 1595
BisI GCNGC 4 cut(s) 1350, 2130, 2133, 2247
BlsI GCNGC 4 cut(s) 1351, 2131, 2134, 2248
BmcAI AGTACT 1 cut(s) 622
Bme1390I CCNGG 1 cut(s) 224
Bme18I GGWCC 2 cut(s) 1858, 2122
BmgT120I GGNCC 2 cut(s) 1858, 2122
BmiI GGNNCC 2 cut(s) 935, 1859
BmrFI CCNGG 1 cut(s) 224
BpiI GAAGAC 1 cut(s) 2186
Bpu14I TTCGAA 1 cut(s) 1897
BsaAI YACGTR 1 cut(s) 1251
BsaI GGTCTC 1 cut(s) 150
BsaJI CCNNGG 2 cut(s) 1267, 1807
BsaWI WCCGGW 5 cut(s) 1342, 1388, 1434, 2047, 2443
BsaXI ACNNNNNCTCC 2 cut(s) 785, 815
Bsc4I CCNNNNNNNGG 1 cut(s) 1420
Bse118I RCCGGY 2 cut(s) 1388, 2443
Bse1I ACTGG 2 cut(s) 146, 2381
Bse3DI GCAATG 2 cut(s) 2294, 2421
BseBI CCWGG 1 cut(s) 224
BseDI CCNNGG 2 cut(s) 1267, 1807
BseLI CCNNNNNNNGG 1 cut(s) 1420
BseMI GCAATG 2 cut(s) 2294, 2421
BseMII CTCAG 4 cut(s) 388, 981, 1545, 2076
BseNI ACTGG 2 cut(s) 146, 2381
BseRI GAGGAG 2 cut(s) 1347, 1403
BseSI GKGCMC 1 cut(s) 1566
BseXI GCAGC 3 cut(s) 2116, 2119, 2233
BseYI CCCAGC 1 cut(s) 757
Bsh1285I CGRYCG 1 cut(s) 217
BshFI GGCC 1 cut(s) 1287
BshTI ACCGGT 2 cut(s) 1388, 2443
BsiEI CGRYCG 1 cut(s) 217
BsiHKAI GWGCWC 1 cut(s) 1566
BsiSI CCGG 5 cut(s) 1343, 1389, 1435, 2048, 2444
BslFI GGGAC 1 cut(s) 1871
BslI CCNNNNNNNGG 1 cut(s) 1420
BsmAI GTCTC 6 cut(s) 150, 547, 1532, 1806, 1826, 2162
BsmFI GGGAC 1 cut(s) 1871
BsnI GGCC 1 cut(s) 1287
Bso31I GGTCTC 1 cut(s) 150
Bsp119I TTCGAA 1 cut(s) 1897
Bsp1286I GDGCHC 1 cut(s) 1566
Bsp1407I TGTACA 1 cut(s) 2164
Bsp143I GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
Bsp19I CCATGG 1 cut(s) 1267
BspACI CCGC 4 cut(s) 184, 1350, 1855, 2184
BspANI GGCC 1 cut(s) 1287
BspCNI CTCAG 4 cut(s) 387, 982, 1544, 2077
BspLI GGNNCC 2 cut(s) 935, 1859
BspMI ACCTGC 2 cut(s) 1411, 2344
BspPI GGATC 3 cut(s) 347, 977, 2225
BspT104I TTCGAA 1 cut(s) 1897
BspTNI GGTCTC 1 cut(s) 150
BsrDI GCAATG 2 cut(s) 2294, 2421
BsrFI RCCGGY 2 cut(s) 1388, 2443
BsrGI TGTACA 1 cut(s) 2164
BsrI ACTGG 2 cut(s) 146, 2381
BssAI RCCGGY 2 cut(s) 1388, 2443
BssECI CCNNGG 2 cut(s) 1267, 1807
BssMI GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
BssT1I CCWWGG 2 cut(s) 1267, 1807
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 3 cut(s) 115, 620, 971
Bst6I CTCTTC 2 cut(s) 1421, 1824
BstAUI TGTACA 1 cut(s) 2164
BstBAI YACGTR 1 cut(s) 1251
BstBI TTCGAA 1 cut(s) 1897
BstC8I GCNNGC 5 cut(s) 755, 1025, 1624, 2188, 2412
BstDEI CTNAG 7 cut(s) 325, 374, 957, 990, 1200, 1531, 2085
BstDSI CCRYGG 1 cut(s) 1267
BstKTI GATC 7 cut(s) 68, 217, 342, 886, 985, 1598, 2233
BstMAI GTCTC 6 cut(s) 150, 547, 1532, 1806, 1826, 2162
BstMBI GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
BstMCI CGRYCG 1 cut(s) 217
BstMWI GCNNNNNNNGC 1 cut(s) 759
BstNI CCWGG 1 cut(s) 224
BstNSI RCATGY 3 cut(s) 2190, 2194, 2414
BstSCI CCNGG 1 cut(s) 222
BstSFI CTRYAG 1 cut(s) 1211
BstSLI GKGCMC 1 cut(s) 1566
BstSNI TACGTA 1 cut(s) 1251
BstV1I GCAGC 3 cut(s) 2116, 2119, 2233
BstV2I GAAGAC 1 cut(s) 2186
BstX2I RGATCY 2 cut(s) 339, 1595
BstYI RGATCY 2 cut(s) 339, 1595
BsuI GTATCC 2 cut(s) 127, 740
BsuRI GGCC 1 cut(s) 1287
BtgI CCRYGG 1 cut(s) 1267
BtsI GCAGTG 1 cut(s) 465
BtsIMutI CAGTG 3 cut(s) 111, 465, 2388
BveI ACCTGC 2 cut(s) 1411, 2344
Cac8I GCNNGC 5 cut(s) 755, 1025, 1624, 2188, 2412
Cfr10I RCCGGY 2 cut(s) 1388, 2443
Cfr13I GGNCC 2 cut(s) 1858, 2122
Csp6I GTAC 5 cut(s) 621, 837, 1655, 1920, 2165
CspAI ACCGGT 2 cut(s) 1388, 2443
CspCI CAANNNNNGTGG 2 cut(s) 1666, 1701
CviQI GTAC 5 cut(s) 621, 837, 1655, 1920, 2165
DdeI CTNAG 7 cut(s) 325, 374, 957, 990, 1200, 1531, 2085
DpnI GATC 7 cut(s) 67, 216, 341, 885, 984, 1597, 2232
DpnII GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
Eam1104I CTCTTC 2 cut(s) 1421, 1824
EarI CTCTTC 2 cut(s) 1421, 1824
Eco105I TACGTA 1 cut(s) 1251
Eco130I CCWWGG 2 cut(s) 1267, 1807
Eco31I GGTCTC 1 cut(s) 150
Eco32I GATATC 1 cut(s) 766
Eco47I GGWCC 2 cut(s) 1858, 2122
Eco57I CTGAAG 3 cut(s) 338, 1848, 1988
EcoO109I RGGNCCY 1 cut(s) 1858
EcoRI GAATTC 1 cut(s) 1257
EcoRII CCWGG 1 cut(s) 222
EcoRV GATATC 1 cut(s) 766
EcoT14I CCWWGG 2 cut(s) 1267, 1807
EcoT22I ATGCAT 2 cut(s) 52, 2192
ErhI CCWWGG 2 cut(s) 1267, 1807
FalI AAGNNNNNCTT 4 cut(s) 1635, 1667, 2204, 2236
FaqI GGGAC 1 cut(s) 1871
FauI CCCGC 1 cut(s) 1848
FauNDI CATATG 1 cut(s) 1290
FblI GTMKAC 2 cut(s) 192, 1999
Fnu4HI GCNGC 4 cut(s) 1350, 2130, 2133, 2247
Fsp4HI GCNGC 4 cut(s) 1350, 2130, 2133, 2247
FspBI CTAG 1 cut(s) 101
GluI GCNGC 4 cut(s) 1350, 2130, 2133, 2247
GsaI CCCAGC 1 cut(s) 761
HaeIII GGCC 1 cut(s) 1287
HapII CCGG 5 cut(s) 1343, 1389, 1435, 2048, 2444
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HindIII AAGCTT 2 cut(s) 245, 392
HinfI GANTC 7 cut(s) 219, 412, 437, 494, 1129, 1482, 2450
HpaII CCGG 5 cut(s) 1343, 1389, 1435, 2048, 2444
HphI GGTGA 9 cut(s) 192, 553, 611, 1332, 1508, 1870, 2188, 2221, 2330
Hpy166II GTNNAC 6 cut(s) 193, 1564, 1668, 1939, 2000, 2165
Hpy188III TCNNGA 8 cut(s) 94, 155, 441, 1599, 2028, 2198, 2228, 2330
Hpy8I GTNNAC 6 cut(s) 193, 1564, 1668, 1939, 2000, 2165
Hpy99I CGWCG 1 cut(s) 161
HpyCH4III ACNGT 3 cut(s) 115, 620, 971
HpyCH4IV ACGT 3 cut(s) 1250, 1767, 1872
HpyF10VI GCNNNNNNNGC 1 cut(s) 759
HpyF3I CTNAG 7 cut(s) 325, 374, 957, 990, 1200, 1531, 2085
HpySE526I ACGT 3 cut(s) 1250, 1767, 1872
Kzo9I GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
LmnI GCTCC 1 cut(s) 1948
Lsp1109I GCAGC 3 cut(s) 2116, 2119, 2233
MaeI CTAG 1 cut(s) 101
MaeII ACGT 3 cut(s) 1250, 1767, 1872
MaeIII GTNAC 5 cut(s) 518, 1246, 1771, 1876, 1984
MalI GATC 7 cut(s) 67, 216, 341, 885, 984, 1597, 2232
MboI GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
MfeI CAATTG 2 cut(s) 1850, 1993
MflI RGATCY 2 cut(s) 339, 1595
MhlI GDGCHC 1 cut(s) 1566
MlyI GAGTC 1 cut(s) 421
MmeI TCCRAC 2 cut(s) 1587, 2100
Mph1103I ATGCAT 2 cut(s) 52, 2192
MroXI GAANNNNTTC 2 cut(s) 1520, 2219
MseI TTAA 9 cut(s) 243, 449, 846, 917, 939, 1056, 1142, 1305, 1317
MslI CAYNNNNRTG 4 cut(s) 429, 1293, 1569, 1621
MspI CCGG 5 cut(s) 1343, 1389, 1435, 2048, 2444
MspR9I CCNGG 1 cut(s) 224
MunI CAATTG 2 cut(s) 1850, 1993
MvaI CCWGG 1 cut(s) 224
MwoI GCNNNNNNNGC 1 cut(s) 759
NcoI CCATGG 1 cut(s) 1267
NdeI CATATG 1 cut(s) 1290
NdeII GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
NlaIV GGNNCC 2 cut(s) 935, 1859
NmuCI GTSAC 1 cut(s) 1876
NsiI ATGCAT 2 cut(s) 52, 2192
NspI RCATGY 3 cut(s) 2190, 2194, 2414
NspV TTCGAA 1 cut(s) 1897
PaeI GCATGC 2 cut(s) 2190, 2414
PdmI GAANNNNTTC 2 cut(s) 1520, 2219
PfeI GAWTC 6 cut(s) 219, 437, 494, 1129, 1482, 2450
PfoI TCCNGGA 1 cut(s) 222
PinAI ACCGGT 2 cut(s) 1388, 2443
PkrI GCNGC 4 cut(s) 1351, 2131, 2134, 2248
Ple19I CGATCG 1 cut(s) 217
PleI GAGTC 1 cut(s) 420
PpsI GAGTC 1 cut(s) 420
Ppu21I YACGTR 1 cut(s) 1251
PpuMI RGGWCCY 1 cut(s) 1858
PshBI ATTAAT 1 cut(s) 1056
PsiI TTATAA 1 cut(s) 975
Psp1406I AACGTT 2 cut(s) 1767, 1872
Psp5II RGGWCCY 1 cut(s) 1858
Psp6I CCWGG 1 cut(s) 222
PspFI CCCAGC 1 cut(s) 757
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 2 cut(s) 935, 1859
PspPI GGNCC 2 cut(s) 1858, 2122
PspPPI RGGWCCY 1 cut(s) 1858
PsrI GAACNNNNNNTAC 2 cut(s) 1638, 1670
PsuI RGATCY 2 cut(s) 339, 1595
PvuI CGATCG 1 cut(s) 217
RsaI GTAC 5 cut(s) 622, 838, 1656, 1921, 2166
RsaNI GTAC 5 cut(s) 621, 837, 1655, 1920, 2165
RseI CAYNNNNRTG 4 cut(s) 429, 1293, 1569, 1621
SalI GTCGAC 1 cut(s) 191
SaqAI TTAA 9 cut(s) 243, 449, 846, 917, 939, 1056, 1142, 1305, 1317
SatI GCNGC 4 cut(s) 1350, 2130, 2133, 2247
Sau3AI GATC 7 cut(s) 65, 214, 339, 883, 982, 1595, 2230
Sau96I GGNCC 2 cut(s) 1858, 2122
ScaI AGTACT 1 cut(s) 622
SchI GAGTC 1 cut(s) 421
ScrFI CCNGG 1 cut(s) 224
SduI GDGCHC 1 cut(s) 1566
SfcI CTRYAG 1 cut(s) 1211
SfuI TTCGAA 1 cut(s) 1897
SinI GGWCC 2 cut(s) 1858, 2122
SmiMI CAYNNNNRTG 4 cut(s) 429, 1293, 1569, 1621
SnaBI TACGTA 1 cut(s) 1251
SpeI ACTAGT 1 cut(s) 100
SphI GCATGC 2 cut(s) 2190, 2414
SsiI CCGC 4 cut(s) 184, 1350, 1855, 2184
SspI AATATT 1 cut(s) 718
SspMI CTAG 1 cut(s) 101
StyD4I CCNGG 1 cut(s) 222
StyI CCWWGG 2 cut(s) 1267, 1807
TaaI ACNGT 3 cut(s) 115, 620, 971
TaiI ACGT 3 cut(s) 1253, 1770, 1875
TatI WGTACW 2 cut(s) 620, 2164
TauI GCSGC 1 cut(s) 1352
TfiI GAWTC 6 cut(s) 219, 437, 494, 1129, 1482, 2450
Tru1I TTAA 9 cut(s) 243, 449, 846, 917, 939, 1056, 1142, 1305, 1317
Tru9I TTAA 9 cut(s) 243, 449, 846, 917, 939, 1056, 1142, 1305, 1317
TscAI CASTG 3 cut(s) 118, 465, 2388
TseFI GTSAC 1 cut(s) 1876
TseI GCWGC 3 cut(s) 2129, 2132, 2246
Tsp45I GTSAC 1 cut(s) 1876
TspGWI ACGGA 3 cut(s) 583, 1704, 2445
TspRI CASTG 3 cut(s) 118, 465, 2388
VneI GTGCAC 1 cut(s) 1562
VpaK11BI GGWCC 2 cut(s) 1858, 2122
VspI ATTAAT 1 cut(s) 1056
XapI RAATTY 2 cut(s) 150, 1257
XceI RCATGY 3 cut(s) 2190, 2194, 2414
XmiI GTMKAC 2 cut(s) 192, 1999
XmnI GAANNNNTTC 2 cut(s) 1520, 2219
XspI CTAG 1 cut(s) 101
ZrmI AGTACT 1 cut(s) 622
Zsp2I ATGCAT 2 cut(s) 52, 2192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.