Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0010927

Physical Location & Seq

Genomic Coordinates Forward (+)

23197531 .. 23201655

Gene Structure 4125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g30030.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGTCCAAGACTCTTCTCTCTCGCATCAAACCCCTCCACACCCCCAAACCCACTCGCTCATCTCCCTCTTCACCGCCTCACATCAAGAACCTGGTCCACGAAACCATCCACATCCTCACAACCCACCAACAATGGGAGCAGTCCCTCCAAACCCACTTCTCCGAAACCCGAACGCACGTCTCCGACGTCGCCCATTTCGTTTTGGACAAAATCCCCAACGCCGAGTTGGGTTTGAAGTTCTTCGACTGGGCTTTCCGGCGACCCTACTGCTGCTCCCCAACTGGGTCCGCCTATAATTCTCTCTTGAAGCGTTTGGCTTGGTTTGGAGTGGTTTCGGAGATTGAGAATGTGATGCAGAGTATGAAAGTGGAAGATGTTAAACCCAGTAAGGATGCTTTGAGCTTTGTGATTCTGGCGTATGCTGATTCTGGGTTGGTTGATAAGGCTCTTGAGTTGTATGGATTTGGTGTCCATTCGTGTGGTTCGGTTCCGAGTGTTTACGCCTGCAATGCTTTGCTTATGGTGCTTGTGAAGAATGGGAGAGTTGATGTTGCACGCCAGGTGTATGATGAAATGCTTGAGAAAGACGGTGGTGATGGTGAGGGTGTATGTGTAGATAACTACAGTACTTGTATCATGGTGAGGGGGCTGTGTAAGGAAGGCAAGGTTGAAGAAGGGAGGAGGTTGATTGTGGAGAGATGGGGAGAGAGTTGTGTGCCGAATGTTGTGTTTTATAATACGCTGATTGATGGATATTGTAAGAAGGGAGAGGTTGGAAGGGCTGATGGGCTGTTTAGGGAGTTGAAGTTGAAGGGGTTTCTGCCTACGTTGCAAACTTATGGAGCTTTGATTAATGGGTACTGCAAAGATGGGAACTTTGTGGCGATTGATAGGCTTTTGATGGAAATGAAGGAGAGGGGTTTGACGGTCAATGCACAAGTACATAATGCTATAGTTGAGGCTAGGTGTAAGCATGATGGTTCTGGTACTGCGGTGGATGCTGAAGCGAGGATGATTGAGAGTGGTTGCGGGCCAGATATTAGAACTTACAATATTTTGATTAATAGTTCGTGTAAGAAAGGGAAGGTTGAGGTAGCCGAGCAGTTTCTAGAGCAGGCAATGAAGAGGGGATTGGTTCCGAATGAGTTTAGTTATACTCCTCTATTTCAAGTCTATTGCAGACAAGGGGAACACTGTAGGGCCCTGGATTTGCTTGTTGAGATGACAAAAAGAGGTCACAAACCTGATTTGGTATCTTTTGGAGCCTTGATTCATGGACATGTTGTTTCTGGGGACGTTGATTTTGCATTGACAGTCCGGGACAGAATGATAGAAAATGGGATACTCCCTGATGCTTGCATTTACAATGTGTTGATAAGTGGTCTTTGCAAGAAAGGGAGGGTTCCTGCTGCCAAATTGCTGCTTGGTCAGATGCTTGACCAAAATATACTACCTGATTCATTTGTTTACGCTACTTTGGTAGATGGGTTAATCAGAAATGGGAACCTTGAGGAGGCTAAAAGTATATTTGAGTTAGCAGTTGAAAAGGGTCTAGATCCTGGTGTTGTGGGGTACAATGCTATGATCAAGGGTTACTGCAGATTTGGAATGATGAATGATGCACTGTCATGCCTCGAAAAGATGAAGAAAAAGAATCATCAGCCTGATGGGTTTACTTACTCCACAATAATTGATGGGTATGTCAAGCAGCATAACTTGGATGCTGCATTGGAAATTTTTAAACTGATGGTGAAACAGAGATGCAGGCCAAATGTCATTACGTACACCTCCTTGATCAATGGTTTTTGTCGCAAAGGAGATTCTGATGGAGCTGTAAAAACTTTCGTAGAGATGCAATCTCGTGGTGTGGAGCCAAATGTAGTCACATACAGCATACTTATTGGGAAGTTTTGCAAGGTAGGTAAACTTGCAGAAGCAGCCTCCTTTTTCGAACTAATGCTGAAGAAAAAGTGCCATCCTAATGATGTCACTATCCATTATTTGCTAAATGGGTTCACAAATGTTGCAATTTCAAAGGAAGCGAATGAATCTCAAGAAAAGGAGAAATCTATTTTTCTTGATTTCTATACAAAATTGATTTCTGATGGATGGTCCCAGAAGTCTGCTGTTTATAATTCCATTCTCATTTGCCTTTGTCAGTATGGAATGGTTGAAACTGCATTACAGTTGAACGATAAGTTTAGAAATAAAGGTATTGATCTAGACTCTGTTTCTTTTGCGGCTATGCTACAAGGTGTTTTATTGGGAGGAAGATCAAAGGACTGGAAGAATATCATCTCTTTTAACTTGAACGAAAAAGAGCTCCAAACAGCTGTCAGATACTCGCACATAATAGATTTTCAGTTCCATGGAGGAAAAATATCTGAATCTACACTTGTTTTGCAGTCATTGGTTGAAGTTGATAAGTCTGAACCTCAAGAAGTGGAAGACACAGAGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

His_Phos_1 PPR PPR_1 PPR_2 PPR_3 p450

Protein Analysis

821

Amino Acids

91.46

Weight (kDa)

7.04

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	164 - 219	8.8e-08	PPR repeat family
PPR_1	PF12854	237 - 268	1.6e-10	PPR repeat
PPR_2	PF13041	240 - 289	2.8e-16	PPR repeat family
PPR	PF01535	243 - 273	2.7e-07	PPR repeat
PPR	PF01535	279 - 308	4.4e-06	PPR repeat
PPR_2	PF13041	279 - 324	2.7e-07	PPR repeat family
PPR_1	PF12854	342 - 372	1.6e-10	PPR repeat
PPR_2	PF13041	345 - 394	3.3e-12	PPR repeat family
PPR_long	PF17177	368 - 466	3e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	383 - 427	1.5e-08	PPR repeat family
PPR_3	PF13812	404 - 460	1.5e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	446 - 478	1.7e-08	PPR repeat
PPR_2	PF13041	450 - 498	4.2e-11	PPR repeat family
PPR_3	PF13812	474 - 532	5.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	516 - 549	1.8e-08	PPR repeat
PPR_2	PF13041	520 - 569	9.4e-18	PPR repeat family
PPR	PF01535	525 - 552	5.4e-08	PPR repeat
PPR_3	PF13812	545 - 601	2.8e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	551 - 584	7e-06	PPR repeat
PPR	PF01535	558 - 588	9.1e-06	PPR repeat
PPR_2	PF13041	558 - 604	6.9e-16	PPR repeat family
PPR_long	PF17177	569 - 670	2.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	588 - 619	3.5e-12	PPR repeat
PPR_3	PF13812	590 - 637	5.7e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	591 - 639	9.1e-19	PPR repeat family
PPR	PF01535	593 - 623	1.7e-08	PPR repeat
PPR_3	PF13812	616 - 672	7.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	621 - 653	1.6e-10	PPR repeat
PPR_2	PF13041	633 - 673	1.3e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52620
fragaria_vesca	FvH4_6g30030
malus_domestica	MD17G1208200.v1.1
prunus_persica	Prupe.3G082900_v2.0.a1
pyrus_communis	pycom17g21100
rosa_chinensis	RchiOBHm_Chr2g0136061 RchiOBHm_Chr2g0136071
rosa_laevigata	RLG00000019500
rosa_multiflora	Rmu_sc0002070.1_g000001 Rmu_sc0002070.1_g000002 Rmu_sc0002986.1_g000008 Rmu_sc0002986.1_g000009
rosa_roxburghii	Rroxscaffold_2G00108610
rosa_rugosa	Rorug02G0327800
rosa_samantha	Rh2AG379700 Rh2BG386200 Rh2CG365600 Rh2CG365700 Rh2DG402500
rosa_wichuraiana	Rw2G030950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	735, 2133
AatII	GACGTC	1 cut(s)	189
AciI	CCGC	5 cut(s)	74, 288, 992, 1029, 2240
AclWI	GGATC	1 cut(s)	1550
AcsI	RAATTY	1 cut(s)	1734
AcuI	CTGAAG	2 cut(s)	1023, 1982
AcyI	GRCGYC	1 cut(s)	186
AfaI	GTAC	6 cut(s)	628, 860, 942, 988, 1574, 1784
AfiI	CCNNNNNNNGG	3 cut(s)	133, 282, 1513
AflIII	ACRYGT	1 cut(s)	1279
AjiI	CACGTC	1 cut(s)	178
AjnI	CCWGG	4 cut(s)	90, 558, 1203, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	1115, 1147
AluBI	AGCT	5 cut(s)	402, 845, 1832, 2323, 2333
AluI	AGCT	5 cut(s)	402, 845, 1832, 2323, 2333
Alw21I	GWGCWC	1 cut(s)	2325
Alw26I	GTCTC	1 cut(s)	184
AlwI	GGATC	1 cut(s)	1550
AoxI	GGCC	3 cut(s)	1031, 1200, 1766
ApaI	GGGCCC	1 cut(s)	1204
ApeKI	GCWGC	6 cut(s)	270, 1409, 1420, 1708, 1724, 1937
ApoI	RAATTY	1 cut(s)	1734
ArsI	GACNNNNNNTTYG	2 cut(s)	1286, 1318
AseI	ATTAAT	2 cut(s)	852, 1062
Asp700I	GAANNNNTTC	1 cut(s)	239
AspS9I	GGNCC	6 cut(s)	94, 285, 1031, 1200, 1201, 2112
AsuC2I	CCSGG	1 cut(s)	1319
AsuHPI	GGTGA	5 cut(s)	63, 605, 611, 652, 1762
AsuII	TTCGAA	1 cut(s)	1950
AvaII	GGWCC	3 cut(s)	94, 285, 2112
BaeGI	GKGCMC	1 cut(s)	1204
BaeI	ACNNNNGTAYC	2 cut(s)	978, 1011
BanII	GRGCYC	2 cut(s)	1204, 2325
BauI	CACGAG	1 cut(s)	1860
BbsI	GAAGAC	1 cut(s)	2454
Bbv12I	GWGCWC	1 cut(s)	2325
BbvI	GCAGC	6 cut(s)	257, 1396, 1407, 1711, 1720, 1949
BcgI	CGANNNNNNTGC	2 cut(s)	249, 283
BciT130I	CCWGG	4 cut(s)	92, 560, 1205, 1560
BciVI	GTATCC	1 cut(s)	1335
BclI	TGATCA	2 cut(s)	1584, 1794
BcnI	CCSGG	1 cut(s)	1319
BcoDI	GTCTC	1 cut(s)	184
BfaI	CTAG	4 cut(s)	963, 1109, 1553, 2222
BfmI	CTRYAG	4 cut(s)	622, 951, 1195, 1597
BfuI	GTATCC	1 cut(s)	1335
BisI	GCNGC	7 cut(s)	271, 1410, 1421, 1709, 1725, 1938, 2241
BlsI	GCNGC	7 cut(s)	272, 1411, 1422, 1710, 1726, 1939, 2242
BmcAI	AGTACT	1 cut(s)	628
Bme1390I	CCNGG	5 cut(s)	92, 560, 1205, 1319, 1560
Bme18I	GGWCC	3 cut(s)	94, 285, 2112
BmgBI	CACGTC	1 cut(s)	178
BmgT120I	GGNCC	6 cut(s)	94, 285, 1031, 1200, 1201, 2112
BmiI	GGNNCC	9 cut(s)	286, 489, 1137, 1202, 1264, 1404, 1505, 1872, 2114
BmrFI	CCNGG	5 cut(s)	92, 560, 1205, 1319, 1560
BmrI	ACTGGG	3 cut(s)	256, 291, 378
BmuI	ACTGGG	3 cut(s)	256, 291, 378
BpiI	GAAGAC	1 cut(s)	2454
Bpu14I	TTCGAA	1 cut(s)	1950
BpuEI	CTTGAG	5 cut(s)	470, 599, 1529, 2037, 2421
BpuMI	CCSGG	1 cut(s)	1319
BsaAI	YACGTR	1 cut(s)	1782
BsaHI	GRCGYC	1 cut(s)	186
BsaJI	CCNNGG	2 cut(s)	1203, 2368
BsaXI	ACNNNNNCTCC	4 cut(s)	257, 287, 791, 821
Bsc4I	CCNNNNNNNGG	3 cut(s)	133, 282, 1513
Bse1I	ACTGG	4 cut(s)	251, 286, 384, 2288
Bse3DI	GCAATG	2 cut(s)	514, 1125
BseBI	CCWGG	4 cut(s)	92, 560, 1205, 1560
BseDI	CCNNGG	2 cut(s)	1203, 2368
BseGI	GGATG	8 cut(s)	105, 111, 397, 1003, 1017, 1726, 1975, 2114
BseLI	CCNNNNNNNGG	3 cut(s)	133, 282, 1513
BseMI	GCAATG	2 cut(s)	514, 1125
BseNI	ACTGG	4 cut(s)	251, 286, 384, 2288
BseRI	GAGGAG	3 cut(s)	694, 1149, 1526
BseSI	GKGCMC	1 cut(s)	1204
BseXI	GCAGC	6 cut(s)	257, 1396, 1407, 1711, 1720, 1949
BshFI	GGCC	3 cut(s)	1033, 1202, 1768
BsiHKAI	GWGCWC	1 cut(s)	2325
BsiSI	CCGG	2 cut(s)	256, 1318
BslFI	GGGAC	4 cut(s)	127, 1307, 1334, 2098
BslI	CCNNNNNNNGG	3 cut(s)	133, 282, 1513
BsmAI	GTCTC	1 cut(s)	184
BsmBI	CGTCTC	1 cut(s)	184
BsmFI	GGGAC	4 cut(s)	127, 1307, 1334, 2098
BsnI	GGCC	3 cut(s)	1033, 1202, 1768
Bsp119I	TTCGAA	1 cut(s)	1950
Bsp120I	GGGCCC	1 cut(s)	1200
Bsp1286I	GDGCHC	2 cut(s)	1204, 2325
Bsp143I	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
Bsp19I	CCATGG	1 cut(s)	2368
BspACI	CCGC	5 cut(s)	74, 288, 992, 1029, 2240
BspANI	GGCC	3 cut(s)	1033, 1202, 1768
BspLI	GGNNCC	9 cut(s)	286, 489, 1137, 1202, 1264, 1404, 1505, 1872, 2114
BspMAI	CTGCAG	1 cut(s)	1601
BspPI	GGATC	1 cut(s)	1550
BspT104I	TTCGAA	1 cut(s)	1950
BsrDI	GCAATG	2 cut(s)	514, 1125
BsrI	ACTGG	4 cut(s)	251, 286, 384, 2288
BssECI	CCNNGG	2 cut(s)	1203, 2368
BssMI	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
BssNI	GRCGYC	1 cut(s)	186
BssSI	CACGAG	1 cut(s)	1860
BssT1I	CCWWGG	1 cut(s)	2368
Bst2BI	CACGAG	1 cut(s)	1860
Bst2UI	CCWGG	4 cut(s)	92, 560, 1205, 1560
Bst4CI	ACNGT	7 cut(s)	590, 626, 928, 1196, 1315, 1626, 2187
Bst6I	CTCTTC	3 cut(s)	18, 73, 1118
BstACI	GRCGYC	1 cut(s)	186
BstBAI	YACGTR	1 cut(s)	1782
BstBI	TTCGAA	1 cut(s)	1950
BstC8I	GCNNGC	6 cut(s)	505, 556, 1031, 1116, 1357, 1766
BstDSI	CCRYGG	1 cut(s)	2368
BstENI	CCTNNNNNAGG	1 cut(s)	1511
BstF5I	GGATG	8 cut(s)	105, 111, 397, 1003, 1017, 1726, 1975, 2114
BstKTI	GATC	5 cut(s)	1558, 1587, 1797, 2221, 2276
BstMAI	GTCTC	1 cut(s)	184
BstMBI	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
BstMWI	GCNNNNNNNGC	5 cut(s)	509, 523, 829, 998, 1937
BstNI	CCWGG	4 cut(s)	92, 560, 1205, 1560
BstNSI	RCATGY	1 cut(s)	1283
BstSCI	CCNGG	5 cut(s)	90, 558, 1203, 1317, 1558
BstSFI	CTRYAG	4 cut(s)	622, 951, 1195, 1597
BstSLI	GKGCMC	1 cut(s)	1204
BstSNI	TACGTA	1 cut(s)	1782
BstV1I	GCAGC	6 cut(s)	257, 1396, 1407, 1711, 1720, 1949
BstV2I	GAAGAC	1 cut(s)	2454
BstX2I	RGATCY	1 cut(s)	1555
BstXI	CCANNNNNNTGG	1 cut(s)	479
BstYI	RGATCY	1 cut(s)	1555
BsuI	GTATCC	1 cut(s)	1335
BsuRI	GGCC	3 cut(s)	1033, 1202, 1768
BtgI	CCRYGG	1 cut(s)	2368
BtrI	CACGTC	1 cut(s)	178
BtsCI	GGATG	8 cut(s)	105, 111, 397, 1003, 1017, 1726, 1975, 2114
BtsIMutI	CAGTG	2 cut(s)	1192, 1622
Cac8I	GCNNGC	6 cut(s)	505, 556, 1031, 1116, 1357, 1766
Cfr13I	GGNCC	6 cut(s)	94, 285, 1031, 1200, 1201, 2112
CsiI	ACCWGGT	1 cut(s)	90
Csp6I	GTAC	6 cut(s)	627, 859, 941, 987, 1573, 1783
CspCI	CAANNNNNGTGG	2 cut(s)	1672, 1707
CviAII	CATG	6 cut(s)	637, 974, 1274, 1280, 1629, 2369
CviQI	GTAC	6 cut(s)	627, 859, 941, 987, 1573, 1783
DpnI	GATC	5 cut(s)	1557, 1586, 1796, 2220, 2275
DpnII	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
DraI	TTTAAA	1 cut(s)	1741
Eam1104I	CTCTTC	3 cut(s)	18, 73, 1118
EarI	CTCTTC	3 cut(s)	18, 73, 1118
EciI	GGCGGA	1 cut(s)	277
Ecl136II	GAGCTC	1 cut(s)	2323
Eco105I	TACGTA	1 cut(s)	1782
Eco130I	CCWWGG	1 cut(s)	2368
Eco24I	GRGCYC	2 cut(s)	1204, 2325
Eco47I	GGWCC	3 cut(s)	94, 285, 2112
Eco53kI	GAGCTC	1 cut(s)	2323
Eco57I	CTGAAG	2 cut(s)	1023, 1982
EcoICRI	GAGCTC	1 cut(s)	2323
EcoNI	CCTNNNNNAGG	1 cut(s)	1511
EcoO109I	RGGNCCY	2 cut(s)	1200, 1201
EcoRII	CCWGG	4 cut(s)	90, 558, 1203, 1558
EcoT14I	CCWWGG	1 cut(s)	2368
EcoT38I	GRGCYC	2 cut(s)	1204, 2325
ErhI	CCWWGG	1 cut(s)	2368
Esp3I	CGTCTC	1 cut(s)	184
FaeI	CATG	6 cut(s)	640, 977, 1277, 1283, 1632, 2372
FaqI	GGGAC	4 cut(s)	127, 1307, 1334, 2098
FatI	CATG	6 cut(s)	636, 973, 1273, 1279, 1628, 2368
FauI	CCCGC	1 cut(s)	1022
FbaI	TGATCA	2 cut(s)	1584, 1794
Fnu4HI	GCNGC	7 cut(s)	271, 1410, 1421, 1709, 1725, 1938, 2241
FokI	GGATG	8 cut(s)	92, 98, 404, 1010, 1024, 1733, 1962, 2121
FriOI	GRGCYC	2 cut(s)	1204, 2325
Fsp4HI	GCNGC	7 cut(s)	271, 1410, 1421, 1709, 1725, 1938, 2241
FspBI	CTAG	4 cut(s)	963, 1109, 1553, 2222
GluI	GCNGC	7 cut(s)	271, 1410, 1421, 1709, 1725, 1938, 2241
HaeIII	GGCC	3 cut(s)	1033, 1202, 1768
HapII	CCGG	2 cut(s)	256, 1318
Hin1I	GRCGYC	1 cut(s)	186
Hin1II	CATG	6 cut(s)	640, 977, 1277, 1283, 1632, 2372
HpaII	CCGG	2 cut(s)	256, 1318
HphI	GGTGA	5 cut(s)	63, 605, 611, 652, 1762
Hpy166II	GTNNAC	7 cut(s)	97, 499, 1468, 1674, 1785, 1925, 2016
Hpy188III	TCNNGA	9 cut(s)	85, 304, 449, 1109, 1553, 2054, 2078, 2222, 2438
Hpy8I	GTNNAC	7 cut(s)	97, 499, 1468, 1674, 1785, 1925, 2016
Hpy99I	CGWCG	2 cut(s)	188, 191
HpyAV	CCTTC	7 cut(s)	653, 668, 757, 771, 805, 904, 1078
HpyCH4III	ACNGT	7 cut(s)	590, 626, 928, 1196, 1315, 1626, 2187
HpyCH4IV	ACGT	5 cut(s)	177, 186, 827, 1296, 1781
HpyF10VI	GCNNNNNNNGC	5 cut(s)	509, 523, 829, 998, 1937
HpySE526I	ACGT	5 cut(s)	177, 186, 827, 1296, 1781
Hsp92I	GRCGYC	1 cut(s)	186
Hsp92II	CATG	6 cut(s)	640, 977, 1277, 1283, 1632, 2372
Ksp22I	TGATCA	2 cut(s)	1584, 1794
Kzo9I	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
LmnI	GCTCC	7 cut(s)	136, 278, 842, 1262, 1829, 1870, 2328
Lsp1109I	GCAGC	6 cut(s)	257, 1396, 1407, 1711, 1720, 1949
MabI	ACCWGGT	1 cut(s)	90
MaeI	CTAG	4 cut(s)	963, 1109, 1553, 2222
MaeII	ACGT	5 cut(s)	177, 186, 827, 1296, 1781
MaeIII	GTNAC	4 cut(s)	1235, 1592, 1882, 1987
MalI	GATC	5 cut(s)	1557, 1586, 1796, 2220, 2275
MboI	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
MflI	RGATCY	1 cut(s)	1555
MhlI	GDGCHC	2 cut(s)	1204, 2325
MluCI	AATT	7 cut(s)	295, 1415, 1689, 1734, 2028, 2093, 2134
MlyI	GAGTC	2 cut(s)	4, 2219
MmeI	TCCRAC	2 cut(s)	207, 754
MroXI	GAANNNNTTC	1 cut(s)	239
MseI	TTAA	6 cut(s)	378, 852, 1062, 1490, 1740, 2304
MslI	CAYNNNNRTG	4 cut(s)	477, 1278, 1627, 1980
MspA1I	CMGCKG	1 cut(s)	2333
MspI	CCGG	2 cut(s)	256, 1318
MspR9I	CCNGG	5 cut(s)	92, 560, 1205, 1319, 1560
MvaI	CCWGG	4 cut(s)	92, 560, 1205, 1560
MwoI	GCNNNNNNNGC	5 cut(s)	509, 523, 829, 998, 1937
NciI	CCSGG	1 cut(s)	1319
NcoI	CCATGG	1 cut(s)	2368
NdeII	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
NlaIII	CATG	6 cut(s)	640, 977, 1277, 1283, 1632, 2372
NlaIV	GGNNCC	9 cut(s)	286, 489, 1137, 1202, 1264, 1404, 1505, 1872, 2114
NmeAIII	GCCGAG	2 cut(s)	247, 1123
NmuCI	GTSAC	3 cut(s)	1235, 1882, 1987
NspI	RCATGY	1 cut(s)	1283
NspV	TTCGAA	1 cut(s)	1950
PciI	ACATGT	1 cut(s)	1279
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 195
PdmI	GAANNNNTTC	1 cut(s)	239
PfeI	GAWTC	8 cut(s)	409, 425, 1270, 1457, 1654, 1820, 2048, 2387
PfoI	TCCNGGA	1 cut(s)	1317
PkrI	GCNGC	7 cut(s)	272, 1411, 1422, 1710, 1726, 1939, 2242
PleI	GAGTC	2 cut(s)	4, 2219
PpsI	GAGTC	2 cut(s)	4, 2219
Ppu21I	YACGTR	1 cut(s)	1782
PscI	ACATGT	1 cut(s)	1279
PshBI	ATTAAT	2 cut(s)	852, 1062
PsiI	TTATAA	2 cut(s)	735, 2133
Psp124BI	GAGCTC	1 cut(s)	2325
Psp6I	CCWGG	4 cut(s)	90, 558, 1203, 1558
PspGI	CCWGG	4 cut(s)	90, 558, 1203, 1558
PspN4I	GGNNCC	9 cut(s)	286, 489, 1137, 1202, 1264, 1404, 1505, 1872, 2114
PspOMI	GGGCCC	1 cut(s)	1200
PspPI	GGNCC	6 cut(s)	94, 285, 1031, 1200, 1201, 2112
PstI	CTGCAG	1 cut(s)	1601
PsuI	RGATCY	1 cut(s)	1555
PvuII	CAGCTG	1 cut(s)	2333
RsaI	GTAC	6 cut(s)	628, 860, 942, 988, 1574, 1784
RsaNI	GTAC	6 cut(s)	627, 859, 941, 987, 1573, 1783
RseI	CAYNNNNRTG	4 cut(s)	477, 1278, 1627, 1980
SacI	GAGCTC	1 cut(s)	2325
SaqAI	TTAA	6 cut(s)	378, 852, 1062, 1490, 1740, 2304
SatI	GCNGC	7 cut(s)	271, 1410, 1421, 1709, 1725, 1938, 2241
Sau3AI	GATC	5 cut(s)	1555, 1584, 1794, 2218, 2273
Sau96I	GGNCC	6 cut(s)	94, 285, 1031, 1200, 1201, 2112
ScaI	AGTACT	1 cut(s)	628
SchI	GAGTC	2 cut(s)	4, 2219
ScrFI	CCNGG	5 cut(s)	92, 560, 1205, 1319, 1560
SduI	GDGCHC	2 cut(s)	1204, 2325
SexAI	ACCWGGT	1 cut(s)	90
SfcI	CTRYAG	4 cut(s)	622, 951, 1195, 1597
SfuI	TTCGAA	1 cut(s)	1950
SinI	GGWCC	3 cut(s)	94, 285, 2112
SmiMI	CAYNNNNRTG	4 cut(s)	477, 1278, 1627, 1980
SmlI	CTYRAG	5 cut(s)	449, 578, 1508, 2052, 2436
SmoI	CTYRAG	5 cut(s)	449, 578, 1508, 2052, 2436
SnaBI	TACGTA	1 cut(s)	1782
Sse9I	AATT	7 cut(s)	295, 1415, 1689, 1734, 2028, 2093, 2134
SsiI	CCGC	5 cut(s)	74, 288, 992, 1029, 2240
SspI	AATATT	1 cut(s)	1054
SspMI	CTAG	4 cut(s)	963, 1109, 1553, 2222
SstI	GAGCTC	1 cut(s)	2325
StyD4I	CCNGG	5 cut(s)	90, 558, 1203, 1317, 1558
StyI	CCWWGG	1 cut(s)	2368
TaaI	ACNGT	7 cut(s)	590, 626, 928, 1196, 1315, 1626, 2187
TaiI	ACGT	5 cut(s)	180, 189, 830, 1299, 1784
TaqI	TCGA	3 cut(s)	243, 1635, 1950
TasI	AATT	7 cut(s)	295, 1415, 1689, 1734, 2028, 2093, 2134
TatI	WGTACW	2 cut(s)	626, 940
TauI	GCSGC	1 cut(s)	2243
TfiI	GAWTC	8 cut(s)	409, 425, 1270, 1457, 1654, 1820, 2048, 2387
Tru1I	TTAA	6 cut(s)	378, 852, 1062, 1490, 1740, 2304
Tru9I	TTAA	6 cut(s)	378, 852, 1062, 1490, 1740, 2304
TscAI	CASTG	2 cut(s)	1199, 1629
TseFI	GTSAC	3 cut(s)	1235, 1882, 1987
TseI	GCWGC	6 cut(s)	270, 1409, 1420, 1708, 1724, 1937
Tsp45I	GTSAC	3 cut(s)	1235, 1882, 1987
TspDTI	ATGAA	9 cut(s)	377, 585, 923, 1136, 1262, 1449, 1628, 1658, 2061
TspRI	CASTG	2 cut(s)	1199, 1629
VpaK11BI	GGWCC	3 cut(s)	94, 285, 2112
VspI	ATTAAT	2 cut(s)	852, 1062
XagI	CCTNNNNNAGG	1 cut(s)	1511
XapI	RAATTY	1 cut(s)	1734
XbaI	TCTAGA	3 cut(s)	1108, 1552, 2221
XceI	RCATGY	1 cut(s)	1283
XcmI	CCANNNNNNNNNTGG	1 cut(s)	223
XmnI	GAANNNNTTC	1 cut(s)	239
XspI	CTAG	4 cut(s)	963, 1109, 1553, 2222
ZraI	GACGTC	1 cut(s)	187
ZrmI	AGTACT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.