AT1G62180

reductase 2

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
22975530 .. 22977885
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G62180.2

Sequence Viewer

Length: 1365 bp
ATGGCTTTAGCTGTTACTTCTTCTTCAACTGCAATCTCTGGATCGAGTTTCTCTCGTTCTGGAGCTTCTTCTGAATCTAAAGCTCTTCAAATATGTTCGATTAGGTTATCTGATCGAACCCATTTGTCTCAGAGACGTTACTCTATGAAACCTTTAAACGCTGAGTCACATTCACGAAGCGAATCTTGGGTTACTCGTGCTTCAACTCTAATTGCTCCTGAAGTTGAAGAGAAAGGAGGAGAAGTTGAAGACTTTGAGCAACTTGCTAAAAAGCTTGAAGATGCTTCTCCACTTGAAATCATGGATAAAGCTCTTGAGAGATTCGGAGACCAAATCGCAATTGCTTTTAGTGGAGCTGAAGATGTTGCATTGATTGAATATGCACGTTTAACTGGAAAGCCATTTAGGGTTTTTAGTTTAGATACAGGGAGATTAAACCCTGAAACGTACAGGCTCTTTGACGCAGTCGAGAAGCAGTACGGGATTCGAATTGAGTACATGTTTCCTGATGCAGTTGAGGTTCAAGCTTTAGTGAGGAACAAGGGTTTGTTCTCATTCTATGAAGATGGTCATCAAGAGTGTTGCCGTGTGAGGAAAGTTAGACCTTTGCGTCGTGCTCTTAAGGGTCTTAAAGCTTGGATTACAGGACAGAGGAAAGACCAATCTCCGGGTACGAGATCTGAGATCCCTATTGTTCAGGTTGATCCAGTGTTTGAAGGGTTAGATGGCGGTGTTGGAAGTCTTGTGAAGTGGAATCCTTTGGCTAATGTTGAAGGAGCTGATGTGTGGAACTTTCTGAGAACTATGGATGTTCCGGTGAATGCATTGCACGCACAAGGGTATGTGTCAATCGGGTGTGAGCCGTGTACTAGGCCGGTGCTTCCAGGCCAACATGAGAGAGAAGGAAGGTGGTGGTGGGAAGATGCTAAAGCTAAAGAATGTGGTCTACACAAAGGGAACATCAAGGAGGAAGATGGTGCTGCAGACTCAAAGCCTGCTGCTGTGCAAGAGATATTTGAAAGCAACAATGTGGTTGCATTGAGCAAAGGAGGGGTTGAGAATCTTTTGAAGCTAGAGAACCGTAAAGAGGCGTGGTTGGTCGTACTTTACGCTCCTTGGTGCCCTTTCTGCCAGGCGATGGAAGCATCGTACATCGAATTGGCTGAGAAACTTGCGGGAAAAGGAGTTAAAGTGGCGAAATTCCGAGCTGACGGTGAGCAGAAGGAGTTTGCTAAGCAAGAGCTTCAGTTAGGGAGCTTCCCGACGATACTTCTCTTTCCGAAAAGAGCTCCACGGGCTATTAAGTACCCTTCAGAGCATAGAGATGTTGATTCACTCATGTCGTTTGTGAATCTTCTTCGGTGA

Protein Analysis

454

Amino Acids

50.66

Weight (kDa)

6.45

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAPS_reduct PF01507 104 - 285 1.1e-50 Phosphoadenosine phosphosulfate reductase domain
Thioredoxin PF00085 351 - 443 2.1e-11 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 609
AccB1I GGYRCC 1 cut(s) 1119
AccB7I CCANNNNNTGG 1 cut(s) 1138
AccI GTMKAC 1 cut(s) 946
AciI CCGC 2 cut(s) 729, 1175
AclWI GGATC 3 cut(s) 49, 679, 698
AcsI RAATTY 1 cut(s) 1199
AcuI CTGAAG 4 cut(s) 240, 378, 1229, 1296
AfaI GTAC 8 cut(s) 449, 479, 497, 673, 868, 1104, 1151, 1307
AfiI CCNNNNNNNGG 3 cut(s) 667, 1087, 1138
AflII CTTAAG 1 cut(s) 620
AflIII ACRYGT 1 cut(s) 498
AjnI CCWGG 2 cut(s) 883, 1131
AjuI GAANNNNNNNTTGG 2 cut(s) 169, 201
Alw21I GWGCWC 2 cut(s) 619, 1291
Alw26I GTCTC 3 cut(s) 127, 132, 321
AlwI GGATC 3 cut(s) 49, 679, 698
AoxI GGCC 2 cut(s) 872, 886
ApeKI GCWGC 2 cut(s) 980, 998
ApoI RAATTY 1 cut(s) 1199
AsuC2I CCSGG 1 cut(s) 669
AsuHPI GGTGA 2 cut(s) 829, 1226
AsuII TTCGAA 1 cut(s) 487
BaeGI GKGCMC 1 cut(s) 1124
BanI GGYRCC 1 cut(s) 1119
BanII GRGCYC 1 cut(s) 1291
BauI CACGAG 1 cut(s) 195
BbsI GAAGAC 1 cut(s) 255
Bbv12I GWGCWC 2 cut(s) 619, 1291
BbvI GCAGC 2 cut(s) 967, 985
BccI CCATC 4 cut(s) 560, 719, 968, 1132
BceAI ACGGC 2 cut(s) 570, 847
BciT130I CCWGG 2 cut(s) 885, 1133
BcnI CCSGG 1 cut(s) 669
BcoDI GTCTC 3 cut(s) 127, 132, 321
BfaI CTAG 2 cut(s) 870, 1073
BfmI CTRYAG 1 cut(s) 981
BfrI CTTAAG 1 cut(s) 620
BglII AGATCT 1 cut(s) 677
BisI GCNGC 2 cut(s) 981, 999
BlpI GCTNAGC 1 cut(s) 1233
BlsI GCNGC 2 cut(s) 982, 1000
Bme1390I CCNGG 3 cut(s) 669, 885, 1133
BmiI GGNNCC 1 cut(s) 1121
BmrFI CCNGG 3 cut(s) 669, 885, 1133
BmsI GCATC 4 cut(s) 271, 499, 913, 1154
BpiI GAAGAC 1 cut(s) 255
BplI GAGNNNNNCTC 2 cut(s) 37, 69
BpmI CTGGAG 1 cut(s) 81
Bpu1102I GCTNAGC 1 cut(s) 1233
Bpu14I TTCGAA 1 cut(s) 487
BpuEI CTTGAG 1 cut(s) 335
BpuMI CCSGG 1 cut(s) 669
BsaBI GATNNNNATC 1 cut(s) 570
BsaI GGTCTC 1 cut(s) 321
BsaJI CCNNGG 2 cut(s) 1115, 1292
BsaWI WCCGGW 1 cut(s) 814
BsaXI ACNNNNNCTCC 6 cut(s) 228, 258, 768, 798, 1176, 1206
Bsc4I CCNNNNNNNGG 3 cut(s) 667, 1087, 1138
Bse118I RCCGGY 1 cut(s) 874
Bse1I ACTGG 2 cut(s) 397, 707
Bse3DI GCAATG 1 cut(s) 824
Bse8I GATNNNNATC 1 cut(s) 570
BseBI CCWGG 2 cut(s) 885, 1133
BseDI CCNNGG 2 cut(s) 1115, 1292
BseGI GGATG 1 cut(s) 814
BseJI GATNNNNATC 1 cut(s) 570
BseLI CCNNNNNNNGG 3 cut(s) 667, 1087, 1138
BseMI GCAATG 1 cut(s) 824
BseMII CTCAG 5 cut(s) 143, 153, 672, 788, 1155
BseNI ACTGG 2 cut(s) 397, 707
BseRI GAGGAG 1 cut(s) 252
BseSI GKGCMC 1 cut(s) 1124
BseXI GCAGC 2 cut(s) 967, 985
BshFI GGCC 2 cut(s) 874, 888
BshNI GGYRCC 1 cut(s) 1119
BsiHKAI GWGCWC 2 cut(s) 619, 1291
BsiSI CCGG 3 cut(s) 668, 815, 875
BslI CCNNNNNNNGG 3 cut(s) 667, 1087, 1138
BsmAI GTCTC 3 cut(s) 127, 132, 321
BsmBI CGTCTC 1 cut(s) 127
BsmI GAATGC 1 cut(s) 826
BsnI GGCC 2 cut(s) 874, 888
Bso31I GGTCTC 1 cut(s) 321
Bsp119I TTCGAA 1 cut(s) 487
Bsp1286I GDGCHC 3 cut(s) 619, 1124, 1291
Bsp143I GATC 5 cut(s) 41, 112, 677, 684, 703
Bsp1720I GCTNAGC 1 cut(s) 1233
BspACI CCGC 2 cut(s) 729, 1175
BspANI GGCC 2 cut(s) 874, 888
BspCNI CTCAG 5 cut(s) 142, 154, 673, 789, 1156
BspLI GGNNCC 1 cut(s) 1121
BspMAI CTGCAG 1 cut(s) 985
BspPI GGATC 3 cut(s) 49, 679, 698
BspQI GCTCTTC 1 cut(s) 90
BspT104I TTCGAA 1 cut(s) 487
BspT107I GGYRCC 1 cut(s) 1119
BspTI CTTAAG 1 cut(s) 620
BspTNI GGTCTC 1 cut(s) 321
BsrDI GCAATG 1 cut(s) 824
BsrFI RCCGGY 1 cut(s) 874
BsrI ACTGG 2 cut(s) 397, 707
BssAI RCCGGY 1 cut(s) 874
BssECI CCNNGG 2 cut(s) 1115, 1292
BssMI GATC 5 cut(s) 41, 112, 677, 684, 703
BssSI CACGAG 1 cut(s) 195
BssT1I CCWWGG 1 cut(s) 1115
Bst2BI CACGAG 1 cut(s) 195
Bst2UI CCWGG 2 cut(s) 885, 1133
Bst4CI ACNGT 2 cut(s) 1082, 1214
Bst6I CTCTTC 2 cut(s) 90, 222
BstAFI CTTAAG 1 cut(s) 620
BstBI TTCGAA 1 cut(s) 487
BstC8I GCNNGC 2 cut(s) 831, 996
BstDEI CTNAG 6 cut(s) 129, 162, 681, 797, 1164, 1233
BstDSI CCRYGG 1 cut(s) 1292
BstF5I GGATG 1 cut(s) 814
BstKTI GATC 5 cut(s) 44, 115, 680, 687, 706
BstMAI GTCTC 3 cut(s) 127, 132, 321
BstMBI GATC 5 cut(s) 41, 112, 677, 684, 703
BstMWI GCNNNNNNNGC 4 cut(s) 830, 1128, 1142, 1295
BstNI CCWGG 2 cut(s) 885, 1133
BstNSI RCATGY 1 cut(s) 502
BstSCI CCNGG 3 cut(s) 667, 883, 1131
BstSFI CTRYAG 1 cut(s) 981
BstSLI GKGCMC 1 cut(s) 1124
BstV1I GCAGC 2 cut(s) 967, 985
BstV2I GAAGAC 1 cut(s) 255
BstX2I RGATCY 2 cut(s) 677, 684
BstYI RGATCY 2 cut(s) 677, 684
BsuRI GGCC 2 cut(s) 874, 888
BtgI CCRYGG 1 cut(s) 1292
BtgZI GCGATG 1 cut(s) 1151
BtsCI GGATG 1 cut(s) 814
BtsIMutI CAGTG 1 cut(s) 714
Cac8I GCNNGC 2 cut(s) 831, 996
Cfr10I RCCGGY 1 cut(s) 874
CseI GACGC 2 cut(s) 470, 599
Csp6I GTAC 8 cut(s) 448, 478, 496, 672, 867, 1103, 1150, 1306
CviAII CATG 4 cut(s) 301, 499, 893, 1339
CviQI GTAC 8 cut(s) 448, 478, 496, 672, 867, 1103, 1150, 1306
DdeI CTNAG 6 cut(s) 129, 162, 681, 797, 1164, 1233
DpnI GATC 5 cut(s) 43, 114, 679, 686, 705
DpnII GATC 5 cut(s) 41, 112, 677, 684, 703
DraI TTTAAA 1 cut(s) 156
DrdI GACNNNNNNGTC 1 cut(s) 609
DseDI GACNNNNNNGTC 1 cut(s) 609
Eam1104I CTCTTC 2 cut(s) 90, 222
EarI CTCTTC 2 cut(s) 90, 222
Ecl136II GAGCTC 1 cut(s) 1289
Eco130I CCWWGG 1 cut(s) 1115
Eco24I GRGCYC 1 cut(s) 1291
Eco31I GGTCTC 1 cut(s) 321
Eco53kI GAGCTC 1 cut(s) 1289
Eco57I CTGAAG 4 cut(s) 240, 378, 1229, 1296
EcoICRI GAGCTC 1 cut(s) 1289
EcoRII CCWGG 2 cut(s) 883, 1131
EcoT14I CCWWGG 1 cut(s) 1115
EcoT22I ATGCAT 1 cut(s) 826
EcoT38I GRGCYC 1 cut(s) 1291
ErhI CCWWGG 1 cut(s) 1115
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 4 cut(s) 304, 502, 896, 1342
FalI AAGNNNNNCTT 2 cut(s) 169, 201
FatI CATG 4 cut(s) 300, 498, 892, 1338
FauI CCCGC 1 cut(s) 1168
FblI GTMKAC 1 cut(s) 946
Fnu4HI GCNGC 2 cut(s) 981, 999
FokI GGATG 1 cut(s) 821
FriOI GRGCYC 1 cut(s) 1291
Fsp4HI GCNGC 2 cut(s) 981, 999
FspBI CTAG 2 cut(s) 870, 1073
GluI GCNGC 2 cut(s) 981, 999
GsuI CTGGAG 1 cut(s) 81
HaeIII GGCC 2 cut(s) 874, 888
HapII CCGG 3 cut(s) 668, 815, 875
HgaI GACGC 2 cut(s) 470, 599
Hin1II CATG 4 cut(s) 304, 502, 896, 1342
HindIII AAGCTT 3 cut(s) 272, 525, 633
HpaII CCGG 3 cut(s) 668, 815, 875
HphI GGTGA 2 cut(s) 829, 1226
Hpy166II GTNNAC 2 cut(s) 867, 947
Hpy188I TCNGA 9 cut(s) 73, 112, 132, 326, 682, 798, 1205, 1281, 1315
Hpy188III TCNNGA 9 cut(s) 39, 60, 174, 218, 314, 469, 506, 575, 1261
Hpy8I GTNNAC 2 cut(s) 867, 947
Hpy99I CGWCG 2 cut(s) 615, 1267
HpyAV CCTTC 6 cut(s) 710, 767, 896, 900, 1216, 1320
HpyCH4III ACNGT 2 cut(s) 1082, 1214
HpyCH4IV ACGT 3 cut(s) 136, 385, 446
HpyCH4V TGCA 9 cut(s) 32, 368, 383, 512, 824, 829, 983, 1006, 1037
HpyF10VI GCNNNNNNNGC 4 cut(s) 830, 1128, 1142, 1295
HpyF3I CTNAG 6 cut(s) 129, 162, 681, 797, 1164, 1233
HpySE526I ACGT 3 cut(s) 136, 385, 446
Hsp92II CATG 4 cut(s) 304, 502, 896, 1342
Kzo9I GATC 5 cut(s) 41, 112, 677, 684, 703
LguI GCTCTTC 1 cut(s) 90
LmnI GCTCC 7 cut(s) 62, 220, 353, 776, 1117, 1254, 1294
Lsp1109I GCAGC 2 cut(s) 967, 985
LweI GCATC 4 cut(s) 271, 499, 913, 1154
MaeI CTAG 2 cut(s) 870, 1073
MaeII ACGT 3 cut(s) 136, 385, 446
MaeIII GTNAC 4 cut(s) 13, 137, 165, 190
MalI GATC 5 cut(s) 43, 114, 679, 686, 705
MboI GATC 5 cut(s) 41, 112, 677, 684, 703
MfeI CAATTG 1 cut(s) 339
MflI RGATCY 2 cut(s) 677, 684
MhlI GDGCHC 3 cut(s) 619, 1124, 1291
MluCI AATT 5 cut(s) 210, 339, 489, 1157, 1199
MlyI GAGTC 2 cut(s) 173, 980
MmeI TCCRAC 1 cut(s) 715
MnlI CCTC 8 cut(s) 230, 511, 528, 585, 645, 961, 1043, 1081
Mph1103I ATGCAT 1 cut(s) 826
MseI TTAA 7 cut(s) 155, 389, 434, 621, 630, 1188, 1302
MslI CAYNNNNRTG 1 cut(s) 1323
MspCI CTTAAG 1 cut(s) 620
MspI CCGG 3 cut(s) 668, 815, 875
MspR9I CCNGG 3 cut(s) 669, 885, 1133
MunI CAATTG 1 cut(s) 339
Mva1269I GAATGC 1 cut(s) 826
MvaI CCWGG 2 cut(s) 885, 1133
MwoI GCNNNNNNNGC 4 cut(s) 830, 1128, 1142, 1295
NciI CCSGG 1 cut(s) 669
NdeII GATC 5 cut(s) 41, 112, 677, 684, 703
NlaIII CATG 4 cut(s) 304, 502, 896, 1342
NlaIV GGNNCC 1 cut(s) 1121
NmuCI GTSAC 1 cut(s) 165
NsiI ATGCAT 1 cut(s) 826
NspI RCATGY 1 cut(s) 502
NspV TTCGAA 1 cut(s) 487
PciI ACATGT 1 cut(s) 498
PciSI GCTCTTC 1 cut(s) 90
PctI GAATGC 1 cut(s) 826
PfeI GAWTC 8 cut(s) 74, 182, 321, 484, 754, 1060, 1331, 1351
PflFI GACNNNGTC 1 cut(s) 464
PflMI CCANNNNNTGG 1 cut(s) 1138
PkrI GCNGC 2 cut(s) 982, 1000
PleI GAGTC 2 cut(s) 172, 980
PpsI GAGTC 2 cut(s) 172, 980
PscI ACATGT 1 cut(s) 498
Psp124BI GAGCTC 1 cut(s) 1291
Psp6I CCWGG 2 cut(s) 883, 1131
PspGI CCWGG 2 cut(s) 883, 1131
PspN4I GGNNCC 1 cut(s) 1121
PstI CTGCAG 1 cut(s) 985
PsuI RGATCY 2 cut(s) 677, 684
PsyI GACNNNGTC 1 cut(s) 464
RsaI GTAC 8 cut(s) 449, 479, 497, 673, 868, 1104, 1151, 1307
RsaNI GTAC 8 cut(s) 448, 478, 496, 672, 867, 1103, 1150, 1306
RseI CAYNNNNRTG 1 cut(s) 1323
SacI GAGCTC 1 cut(s) 1291
SapI GCTCTTC 1 cut(s) 90
SaqAI TTAA 7 cut(s) 155, 389, 434, 621, 630, 1188, 1302
SatI GCNGC 2 cut(s) 981, 999
Sau3AI GATC 5 cut(s) 41, 112, 677, 684, 703
SchI GAGTC 2 cut(s) 173, 980
ScrFI CCNGG 3 cut(s) 669, 885, 1133
SduI GDGCHC 3 cut(s) 619, 1124, 1291
SfaNI GCATC 4 cut(s) 271, 499, 913, 1154
SfcI CTRYAG 1 cut(s) 981
SfuI TTCGAA 1 cut(s) 487
SmiMI CAYNNNNRTG 1 cut(s) 1323
SmlI CTYRAG 2 cut(s) 314, 620
SmoI CTYRAG 2 cut(s) 314, 620
Sse9I AATT 5 cut(s) 210, 339, 489, 1157, 1199
SsiI CCGC 2 cut(s) 729, 1175
SspMI CTAG 2 cut(s) 870, 1073
SstI GAGCTC 1 cut(s) 1291
StyD4I CCNGG 3 cut(s) 667, 883, 1131
StyI CCWWGG 1 cut(s) 1115
TaaI ACNGT 2 cut(s) 1082, 1214
TaiI ACGT 3 cut(s) 139, 388, 449
TaqI TCGA 6 cut(s) 44, 98, 115, 468, 487, 1155
TasI AATT 5 cut(s) 210, 339, 489, 1157, 1199
TatI WGTACW 2 cut(s) 495, 866
TfiI GAWTC 8 cut(s) 74, 182, 321, 484, 754, 1060, 1331, 1351
Tru1I TTAA 7 cut(s) 155, 389, 434, 621, 630, 1188, 1302
Tru9I TTAA 7 cut(s) 155, 389, 434, 621, 630, 1188, 1302
TscAI CASTG 1 cut(s) 714
TseFI GTSAC 1 cut(s) 165
TseI GCWGC 2 cut(s) 980, 998
Tsp45I GTSAC 1 cut(s) 165
TspDTI ATGAA 2 cut(s) 161, 576
TspRI CASTG 1 cut(s) 714
Tth111I GACNNNGTC 1 cut(s) 464
Van91I CCANNNNNTGG 1 cut(s) 1138
Vha464I CTTAAG 1 cut(s) 620
XapI RAATTY 1 cut(s) 1199
XceI RCATGY 1 cut(s) 502
XmiI GTMKAC 1 cut(s) 946
XspI CTAG 2 cut(s) 870, 1073
Zsp2I ATGCAT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.