MD11G1215200.v1.1

5'-adenylylsulfate reductase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
31428863 .. 31431319
2457 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1215200.v1.1.491

Sequence Viewer

Length: 1347 bp
ATGGCTTTCTTAGCTCCGCCTCCTTCCCTCCAATCTTTGCTTCGCGCTCCGCTCTCTTTCCACAAGCCCAAAGCTCAAAGGACATCTTCTTTGAATCCATCAGATCAATTCTCGTTTCAATCGAAGGCTGGGGCCGCTTGCCGGAGACCATCATTGGCAACACCCCTTTCCGCAGAATCGAAAAGGAACAAATATCTCCAGGTTGGCAGCAACATAGTACGAAAGGATTACAAAAAACTGGCGAAAGAGTTGGAAGCCGCTTCCCCACTTCAAATCATGGAGAAGGCTCTTGACAAATTTGGGAATGACATTGCCATTGCTTTCAGTGGAGCTGAGGATGTCGCCTTGGTTGAGTATGCCAAACTAACAGGTCGGCCCTTCATGGTATTCAGCCTGGATACTGGGAGGCTTAACCCAGAGGCATACCATTTTTTCGACACTGTTGAGAAGCACTATGGCATTCACATTGAATACATGTTCCCCAATGCCGTTGAAGTTCAAGCACTATGCTGCAGGGTAAGGAAGGTTAGGCCTTTAAGGCGAGCCCTTAAAGGTCTCCATGCCTGGATCACTGGGAAGAGAAAAGACCAGTCTCCTGGCACAAGAGCTGAAATCCTGGTCCAGGTGGATCCATCCCTTGAAGGAATTGATGGTGGAATTGGAAGCTTGTTAAAATGGAATCCTGTTGCCAATGCGGAAGGCCATGACATATGGAACTTCCTCCAAGTCATGGATGTTCCTGTCAATCCTTTGCACTCACAAGGTTACATTTCAATCGGGTGTGAGCCATGCACAAGGCCGGTGCTGCCAGGGCAGCATGAAAGGGAGGGAAGATGGTGGTGGGAGGATGCTAAGGCAAAGGAATGTGGCCTCCATAACGGACATATCGAACAAAAAGCGGCGCTGCACCTCAACGGCAATGGAAATGGGATGTCGACAACAAATGGGAGTGCCAATGTCCCAGACATCTTTAACAGCAAGAACTTGGTTTCCTTGAGCAGGACTGGGATAGAGAACCTGGCTAGATTGGAAAACCGAAGTGAACCTTGGCTTGTTGTTCTTTATGCACCATGGTGCCATTTTTCGCGGGCAATGGAAGGATCGTACGTTGAATTAGCTGAGAATCTGGCAGGAACATGGGTAAAGGTGGGTAAGTTCAGGTCTGATGGGGAACACAAGGAATATGCACAGAGAGAACTGAAGTTGGGGAGCTTCCCAACAATACTCTTCTTCCCCAAACACTCGTCAAAGCCCTTCAAGTATCCATCGGAGAAGAGGGACGTAGCATCGTTGTTGGCTTTTGGGAATGCCCTCCGGTTAGAACTCAATGCACCTGATCGGAGCTAG

Protein Analysis

449

Amino Acids

49.94

Weight (kDa)

9.14

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAPS_reduct PF01507 104 - 267 1.5e-36 Phosphoadenosine phosphosulfate reductase domain
Thioredoxin PF00085 343 - 422 3e-07 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1074
AccB7I CCANNNNNTGG 1 cut(s) 730
AccBSI CCGCTC 1 cut(s) 52
AccI GTMKAC 1 cut(s) 935
AccII CGCG 2 cut(s) 45, 1087
AciI CCGC 8 cut(s) 17, 50, 135, 171, 258, 695, 899, 1087
AclWI GGATC 4 cut(s) 575, 623, 636, 1108
AcsI RAATTY 1 cut(s) 296
AcuI CTGAAG 1 cut(s) 1220
AfaI GTAC 2 cut(s) 219, 1106
AfiI CCNNNNNNNGG 4 cut(s) 141, 622, 730, 999
AflIII ACRYGT 1 cut(s) 474
AjnI CCWGG 8 cut(s) 198, 393, 563, 595, 615, 621, 808, 1017
AjuI GAANNNNNNNTTGG 4 cut(s) 24, 56, 1030, 1062
AleI CACNNNNGTG 1 cut(s) 1072
AloI GAACNNNNNNTCC 2 cut(s) 974, 1006
AluBI AGCT 8 cut(s) 14, 74, 332, 608, 666, 1118, 1212, 1344
AluI AGCT 8 cut(s) 14, 74, 332, 608, 666, 1118, 1212, 1344
Alw26I GTCTC 3 cut(s) 139, 560, 597
AlwI GGATC 4 cut(s) 575, 623, 636, 1108
AoxI GGCC 6 cut(s) 132, 374, 530, 700, 797, 868
ApeKI GCWGC 5 cut(s) 207, 510, 805, 814, 904
ApoI RAATTY 1 cut(s) 296
ArsI GACNNNNNNTTYG 2 cut(s) 73, 105
AspLEI GCGC 2 cut(s) 47, 904
AspS9I GGNCC 3 cut(s) 132, 375, 619
AvaII GGWCC 1 cut(s) 619
BamHI GGATCC 1 cut(s) 628
BanI GGYRCC 1 cut(s) 1074
BanII GRGCYC 1 cut(s) 547
BbvCI CCTCAGC 1 cut(s) 333
BbvI GCAGC 5 cut(s) 219, 497, 792, 826, 891
BccI CCATC 7 cut(s) 106, 157, 640, 644, 828, 1160, 1273
BceAI ACGGC 2 cut(s) 473, 931
BciT130I CCWGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
BciVI GTATCC 2 cut(s) 391, 1272
BcoDI GTCTC 3 cut(s) 139, 560, 597
BfaI CTAG 2 cut(s) 1023, 1345
BfmI CTRYAG 1 cut(s) 511
BfoI RGCGCY 1 cut(s) 905
BfuI GTATCC 2 cut(s) 391, 1272
BglI GCCNNNNNGGC 1 cut(s) 538
BisI GCNGC 8 cut(s) 135, 208, 258, 511, 806, 815, 900, 905
BlsI GCNGC 8 cut(s) 136, 209, 259, 512, 807, 816, 901, 906
Bme1390I CCNGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
Bme18I GGWCC 1 cut(s) 619
BmgT120I GGNCC 3 cut(s) 132, 375, 619
BmiI GGNNCC 3 cut(s) 133, 630, 1076
BmrFI CCNGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
BmrI ACTGGG 3 cut(s) 411, 582, 1014
BmsI GCATC 2 cut(s) 838, 1295
BmuI ACTGGG 3 cut(s) 411, 582, 1014
BpmI CTGGAG 1 cut(s) 182
Bpu10I CCTNAGC 2 cut(s) 333, 852
BpuEI CTTGAG 1 cut(s) 1015
BsaI GGTCTC 2 cut(s) 139, 560
BsaJI CCNNGG 4 cut(s) 345, 809, 1046, 1070
BsaWI WCCGGW 1 cut(s) 1314
Bsc4I CCNNNNNNNGG 4 cut(s) 141, 622, 730, 999
Bse118I RCCGGY 1 cut(s) 799
Bse1I ACTGG 5 cut(s) 243, 406, 577, 589, 1009
Bse3DI GCAATG 4 cut(s) 309, 315, 925, 1098
BseBI CCWGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
BseDI CCNNGG 4 cut(s) 345, 809, 1046, 1070
BseGI GGATG 5 cut(s) 343, 632, 739, 853, 936
BseLI CCNNNNNNNGG 4 cut(s) 141, 622, 730, 999
BseMI GCAATG 4 cut(s) 309, 315, 925, 1098
BseMII CTCAG 2 cut(s) 324, 1110
BseNI ACTGG 5 cut(s) 243, 406, 577, 589, 1009
BseXI GCAGC 5 cut(s) 219, 497, 792, 826, 891
BseYI CCCAGC 1 cut(s) 128
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 2 cut(s) 45, 1087
BshFI GGCC 6 cut(s) 134, 376, 532, 702, 799, 870
BshNI GGYRCC 1 cut(s) 1074
BsiSI CCGG 3 cut(s) 142, 800, 1315
BsiWI CGTACG 1 cut(s) 1104
BslFI GGGAC 2 cut(s) 944, 1292
BslI CCNNNNNNNGG 4 cut(s) 141, 622, 730, 999
BsmAI GTCTC 3 cut(s) 139, 560, 597
BsmFI GGGAC 2 cut(s) 944, 1292
BsmI GAATGC 2 cut(s) 459, 1312
BsnI GGCC 6 cut(s) 134, 376, 532, 702, 799, 870
Bso31I GGTCTC 2 cut(s) 139, 560
Bsp1286I GDGCHC 1 cut(s) 547
Bsp143I GATC 5 cut(s) 103, 567, 628, 1100, 1336
Bsp19I CCATGG 1 cut(s) 1070
BspACI CCGC 8 cut(s) 17, 50, 135, 171, 258, 695, 899, 1087
BspANI GGCC 6 cut(s) 134, 376, 532, 702, 799, 870
BspCNI CTCAG 2 cut(s) 325, 1111
BspFNI CGCG 2 cut(s) 45, 1087
BspLI GGNNCC 3 cut(s) 133, 630, 1076
BspMAI CTGCAG 1 cut(s) 515
BspPI GGATC 4 cut(s) 575, 623, 636, 1108
BspT107I GGYRCC 1 cut(s) 1074
BspTNI GGTCTC 2 cut(s) 139, 560
BsrBI CCGCTC 1 cut(s) 52
BsrDI GCAATG 4 cut(s) 309, 315, 925, 1098
BsrFI RCCGGY 1 cut(s) 799
BsrI ACTGG 5 cut(s) 243, 406, 577, 589, 1009
BssAI RCCGGY 1 cut(s) 799
BssECI CCNNGG 4 cut(s) 345, 809, 1046, 1070
BssMI GATC 5 cut(s) 103, 567, 628, 1100, 1336
BssT1I CCWWGG 3 cut(s) 345, 1046, 1070
Bst2UI CCWGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
Bst4CI ACNGT 1 cut(s) 442
Bst6I CTCTTC 3 cut(s) 572, 1232, 1268
BstC8I GCNNGC 3 cut(s) 139, 543, 1089
BstDEI CTNAG 4 cut(s) 10, 333, 852, 1119
BstDSI CCRYGG 1 cut(s) 1070
BstENI CCTNNNNNAGG 2 cut(s) 620, 997
BstF5I GGATG 5 cut(s) 343, 632, 739, 853, 936
BstFNI CGCG 2 cut(s) 45, 1087
BstH2I RGCGCY 1 cut(s) 905
BstHHI GCGC 2 cut(s) 47, 904
BstKTI GATC 5 cut(s) 106, 570, 631, 1103, 1339
BstMAI GTCTC 3 cut(s) 139, 560, 597
BstMBI GATC 5 cut(s) 103, 567, 628, 1100, 1336
BstMWI GCNNNNNNNGC 6 cut(s) 11, 134, 538, 805, 811, 814
BstNI CCWGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
BstNSI RCATGY 1 cut(s) 478
BstSCI CCNGG 8 cut(s) 198, 393, 563, 595, 615, 621, 808, 1017
BstSFI CTRYAG 1 cut(s) 511
BstUI CGCG 2 cut(s) 45, 1087
BstV1I GCAGC 5 cut(s) 219, 497, 792, 826, 891
BstX2I RGATCY 1 cut(s) 628
BstXI CCANNNNNNTGG 1 cut(s) 596
BstYI RGATCY 1 cut(s) 628
BsuI GTATCC 2 cut(s) 391, 1272
BsuRI GGCC 6 cut(s) 134, 376, 532, 702, 799, 870
BtgI CCRYGG 1 cut(s) 1070
BtsCI GGATG 5 cut(s) 343, 632, 739, 853, 936
BtsIMutI CAGTG 3 cut(s) 331, 438, 570
Cac8I GCNNGC 3 cut(s) 139, 543, 1089
CfoI GCGC 2 cut(s) 47, 904
Cfr10I RCCGGY 1 cut(s) 799
Cfr13I GGNCC 3 cut(s) 132, 375, 619
Csp6I GTAC 2 cut(s) 218, 1105
CviQI GTAC 2 cut(s) 218, 1105
DdeI CTNAG 4 cut(s) 10, 333, 852, 1119
DpnI GATC 5 cut(s) 105, 569, 630, 1102, 1338
DpnII GATC 5 cut(s) 103, 567, 628, 1100, 1336
Eam1104I CTCTTC 3 cut(s) 572, 1232, 1268
EarI CTCTTC 3 cut(s) 572, 1232, 1268
EciI GGCGGA 1 cut(s) 6
Eco130I CCWWGG 3 cut(s) 345, 1046, 1070
Eco147I AGGCCT 1 cut(s) 532
Eco24I GRGCYC 1 cut(s) 547
Eco31I GGTCTC 2 cut(s) 139, 560
Eco47I GGWCC 1 cut(s) 619
Eco57I CTGAAG 1 cut(s) 1220
EcoNI CCTNNNNNAGG 2 cut(s) 620, 997
EcoRII CCWGG 8 cut(s) 198, 393, 563, 595, 615, 621, 808, 1017
EcoT14I CCWWGG 3 cut(s) 345, 1046, 1070
EcoT38I GRGCYC 1 cut(s) 547
ErhI CCWWGG 3 cut(s) 345, 1046, 1070
FalI AAGNNNNNCTT 4 cut(s) 70, 102, 1030, 1062
FaqI GGGAC 2 cut(s) 944, 1292
FauI CCCGC 1 cut(s) 1080
FauNDI CATATG 1 cut(s) 710
FblI GTMKAC 1 cut(s) 935
Fnu4HI GCNGC 8 cut(s) 135, 208, 258, 511, 806, 815, 900, 905
FokI GGATG 5 cut(s) 350, 619, 746, 860, 943
FriOI GRGCYC 1 cut(s) 547
Fsp4HI GCNGC 8 cut(s) 135, 208, 258, 511, 806, 815, 900, 905
FspBI CTAG 2 cut(s) 1023, 1345
GlaI GCGC 2 cut(s) 46, 903
GluI GCNGC 8 cut(s) 135, 208, 258, 511, 806, 815, 900, 905
GsaI CCCAGC 1 cut(s) 132
GsuI CTGGAG 1 cut(s) 182
HaeII RGCGCY 1 cut(s) 905
HaeIII GGCC 6 cut(s) 134, 376, 532, 702, 799, 870
HapII CCGG 3 cut(s) 142, 800, 1315
HhaI GCGC 2 cut(s) 47, 904
Hin6I GCGC 2 cut(s) 45, 902
HinP1I GCGC 2 cut(s) 45, 902
HincII GTYRAC 1 cut(s) 936
HindII GTYRAC 1 cut(s) 936
HindIII AAGCTT 1 cut(s) 664
HinfI GANTC 4 cut(s) 94, 176, 679, 1123
HpaII CCGG 3 cut(s) 142, 800, 1315
Hpy166II GTNNAC 2 cut(s) 936, 1043
Hpy188I TCNGA 4 cut(s) 103, 1165, 1270, 1341
Hpy188III TCNNGA 1 cut(s) 290
Hpy8I GTNNAC 2 cut(s) 936, 1043
HpyAV CCTTC 9 cut(s) 33, 118, 277, 388, 517, 635, 692, 1091, 1264
HpyCH4III ACNGT 1 cut(s) 442
HpyCH4IV ACGT 2 cut(s) 1107, 1281
HpyCH4V TGCA 7 cut(s) 513, 754, 792, 907, 1067, 1187, 1331
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 134, 538, 805, 811, 814
HpyF3I CTNAG 4 cut(s) 10, 333, 852, 1119
HpySE526I ACGT 2 cut(s) 1107, 1281
HspAI GCGC 2 cut(s) 45, 902
Kzo9I GATC 5 cut(s) 103, 567, 628, 1100, 1336
LmnI GCTCC 5 cut(s) 19, 52, 329, 1209, 1341
Lsp1109I GCAGC 5 cut(s) 219, 497, 792, 826, 891
LweI GCATC 2 cut(s) 838, 1295
MaeI CTAG 2 cut(s) 1023, 1345
MaeII ACGT 2 cut(s) 1107, 1281
MaeIII GTNAC 1 cut(s) 764
MalI GATC 5 cut(s) 105, 569, 630, 1102, 1338
MbiI CCGCTC 1 cut(s) 52
MboI GATC 5 cut(s) 103, 567, 628, 1100, 1336
MboII GAAGA 6 cut(s) 78, 589, 843, 1219, 1222, 1285
MflI RGATCY 1 cut(s) 628
MhlI GDGCHC 1 cut(s) 547
MluCI AATT 5 cut(s) 107, 296, 645, 657, 1112
MmeI TCCRAC 1 cut(s) 231
MseI TTAA 5 cut(s) 411, 536, 549, 671, 972
MslI CAYNNNNRTG 1 cut(s) 1072
MspI CCGG 3 cut(s) 142, 800, 1315
MspR9I CCNGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
Mva1269I GAATGC 2 cut(s) 459, 1312
MvaI CCWGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
MvnI CGCG 2 cut(s) 45, 1087
MwoI GCNNNNNNNGC 6 cut(s) 11, 134, 538, 805, 811, 814
NcoI CCATGG 1 cut(s) 1070
NdeI CATATG 1 cut(s) 710
NdeII GATC 5 cut(s) 103, 567, 628, 1100, 1336
NlaIV GGNNCC 3 cut(s) 133, 630, 1076
NspI RCATGY 1 cut(s) 478
OliI CACNNNNGTG 1 cut(s) 1072
PceI AGGCCT 1 cut(s) 532
PciI ACATGT 1 cut(s) 474
PcsI WCGNNNNNNNCGW 2 cut(s) 119, 885
PctI GAATGC 2 cut(s) 459, 1312
PfeI GAWTC 4 cut(s) 94, 176, 679, 1123
Pfl23II CGTACG 1 cut(s) 1104
PflMI CCANNNNNTGG 1 cut(s) 730
PkrI GCNGC 8 cut(s) 136, 209, 259, 512, 807, 816, 901, 906
PscI ACATGT 1 cut(s) 474
Psp6I CCWGG 8 cut(s) 198, 393, 563, 595, 615, 621, 808, 1017
PspFI CCCAGC 1 cut(s) 128
PspGI CCWGG 8 cut(s) 198, 393, 563, 595, 615, 621, 808, 1017
PspLI CGTACG 1 cut(s) 1104
PspN4I GGNNCC 3 cut(s) 133, 630, 1076
PspPI GGNCC 3 cut(s) 132, 375, 619
PstI CTGCAG 1 cut(s) 515
PsuI RGATCY 1 cut(s) 628
RsaI GTAC 2 cut(s) 219, 1106
RsaNI GTAC 2 cut(s) 218, 1105
RseI CAYNNNNRTG 1 cut(s) 1072
SalI GTCGAC 1 cut(s) 934
SaqAI TTAA 5 cut(s) 411, 536, 549, 671, 972
SatI GCNGC 8 cut(s) 135, 208, 258, 511, 806, 815, 900, 905
Sau3AI GATC 5 cut(s) 103, 567, 628, 1100, 1336
Sau96I GGNCC 3 cut(s) 132, 375, 619
ScrFI CCNGG 8 cut(s) 200, 395, 565, 597, 617, 623, 810, 1019
SduI GDGCHC 1 cut(s) 547
SfaNI GCATC 2 cut(s) 838, 1295
SfcI CTRYAG 1 cut(s) 511
SinI GGWCC 1 cut(s) 619
SmiMI CAYNNNNRTG 1 cut(s) 1072
SmlI CTYRAG 1 cut(s) 994
SmoI CTYRAG 1 cut(s) 994
Sse9I AATT 5 cut(s) 107, 296, 645, 657, 1112
SseBI AGGCCT 1 cut(s) 532
SsiI CCGC 8 cut(s) 17, 50, 135, 171, 258, 695, 899, 1087
SspMI CTAG 2 cut(s) 1023, 1345
StuI AGGCCT 1 cut(s) 532
StyD4I CCNGG 8 cut(s) 198, 393, 563, 595, 615, 621, 808, 1017
StyI CCWWGG 3 cut(s) 345, 1046, 1070
TaaI ACNGT 1 cut(s) 442
TaiI ACGT 2 cut(s) 1110, 1284
TaqI TCGA 5 cut(s) 122, 179, 435, 888, 935
TasI AATT 5 cut(s) 107, 296, 645, 657, 1112
TauI GCSGC 3 cut(s) 137, 260, 902
TfiI GAWTC 4 cut(s) 94, 176, 679, 1123
Tru1I TTAA 5 cut(s) 411, 536, 549, 671, 972
Tru9I TTAA 5 cut(s) 411, 536, 549, 671, 972
TscAI CASTG 3 cut(s) 331, 445, 577
TseI GCWGC 5 cut(s) 207, 510, 805, 814, 904
TspDTI ATGAA 2 cut(s) 370, 834
TspGWI ACGGA 1 cut(s) 894
TspRI CASTG 3 cut(s) 331, 445, 577
Van91I CCANNNNNTGG 1 cut(s) 730
VpaK11BI GGWCC 1 cut(s) 619
XagI CCTNNNNNAGG 2 cut(s) 620, 997
XapI RAATTY 1 cut(s) 296
XceI RCATGY 1 cut(s) 478
XmiI GTMKAC 1 cut(s) 935
XspI CTAG 2 cut(s) 1023, 1345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.