Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0007763

Physical Location & Seq

Genomic Coordinates Forward (+)

46671614 .. 46674373

Gene Structure 2760 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1348200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGCCCTCGCTGTTACTACTTCTTCATCTGCTTCGATCTCTGGTCGCACCTTCACTCCCTCCTCAGAACCCAAAGCCCCGCAATTGGGTTCTATTCGGGTGTTTGATCGATCGTACGGTCAGGTTCAAAGCCAAGCCGTGACGTTTTCTCAGCGGAGGAGCTCGGTGAGGCCGGTGAATGTGCAGCGGAAGCGGAGCGAGTCCATTGTTCCTTCCGCAGCGACAACCGTTGCTCCTGAGGTGGTTGAGAAAGTAGAGGTGGAGGACTATGCACAATTGGCTAAAGAGCTCGAGAATGCTTCCCCTCTTGAGATTATGGACAAGGCGCTTGAGAAATTCGGCAACGATATCGCCATTGCTTTCAGCGGAGCGGAGGATGTTGCTTTGATTGAGTATGCGCATTTAACCGGTAGACCCTATAGGGTTTTCAGCTTGGATACCGGAAGGCTGAACCCCGAAACATATCAGTTCTTTGACACAGTCGAGAAGCACTATGGTATCCACATTGAATACATGTTTCCGGATGCTGTTGAAGTTCAGGCATTAGTAAGGACCAAAGGGCTGTTCTCTTTCTATGAGGATGGGCATCAGGAGTGCTGCCGCGTGAGGAAGGTGAGACCCCTGAGGAGGGCTCTCAAGGGGCTGCGTGCCTGGATCACCGGACAAAGGAAAGATCAATCTCCGGGGACAAGATCTGAAATTCCGGTTGTCCAGGTCGACCCTGTTTTCGAGGGACTGGATGGTGGTGCTGGCAGCTTGGTGAAGTGGAACCCGGTGGCAAATGTCGCGGGTCATGACATATGGAACTTTCTGCGTGCCATGAATGTACCTGTGAATTCACTGCACTCGAAAGGGTACATCTCAATTGGTTGCGAGCCATGCACAAGGTCAGTCCTACCGGGGCAACATGAGAGAGAAGGAAGGTGGTGGTGGGAGGACGCCAAGGCTAAGGAATGCGGTCTTCACAAGGGCAATATTAAACAGGAAGGAGGAGACCAAAATGGCATGGCTGCAGAGTCAAATAGTGCTGCCACGGAAACTGATATATTCACTTCCCAGAATCTAGTCACCTTAACCCGAACTGGAATAGAAAATTTGGCAAAGCTTGAGGACCGGAAAGAACCATGGATTGTAGTGCTCTATGCACCGTGGTGCCCGTTTTGCCAGGCAATGGAAGCATCATTCGTTGAGTTGGCTGACAAGTTGGCGGGGAGCAGCGTGAAAGTGGGGAAGTTCAGAGCAGATGGAGAGCAAAAGGAGTTTGCCCAGAAAGAACTGCAGCTCACAAGCTTCCCCACAATACTCTTCTTCCCCAAACACTCTTCTCAGCCGATCAAGTACCCAACGGAGAAGAGGGACGTCGATTCATTGATGGCGTTCGTCAATGCCCTTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0003674 GO:0003824 GO:0004604 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006790 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009973 GO:0009987 GO:0016491 GO:0016667 GO:0016671 GO:0019379 GO:0019419 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00920 ko01120 map00920 map01120

Pfam Domains

Protein Families

PAPS_reduct Thioredoxin

Protein Analysis

466

Amino Acids

51.75

Weight (kDa)

6.54

Isoelectric Point (pI)

54.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAPS_reduct	PF01507	117 - 296	4.3e-48	Phosphoadenosine phosphosulfate reductase domain
Thioredoxin	PF00085	368 - 462	4.3e-12	Thioredoxin
Thioredoxin_2	PF13098	372 - 440	2.2e-06	Thioredoxin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62180 AT1G62180 AT4G04610 AT4G21990 AT4G21990
fragaria_vesca	FvH4_3g01900
malus_domestica	MD03G1198900.v1.1 MD05G1348200.v1.1 MD10G1323000.v1.1 MD11G1215200.v1.1
prunus_persica	Prupe.4G019200_v2.0.a1 Prupe.4G216100_v2.0.a1
pyrus_communis	pycom03g15040 pycom05g31570 pycom10g27340
rosa_chinensis	RchiOBHm_Chr5g0002761
rosa_laevigata	RLG00000031056
rosa_multiflora	Rmu_sc0013603.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073140
rosa_rugosa	Rorug04G0399100
rosa_samantha	Rh5AG022200 Rh5BG025100 Rh5DG023500
rosa_wichuraiana	Rw5G002070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1362
Acc16I	TGCGCA	1 cut(s)	399
AccB1I	GGYRCC	1 cut(s)	1152
AccB7I	CCANNNNNTGG	1 cut(s)	1171
AccBSI	CCGCTC	1 cut(s)	371
AccI	GTMKAC	2 cut(s)	412, 717
AccII	CGCG	2 cut(s)	603, 788
AccIII	TCCGGA	1 cut(s)	520
AclWI	GGATC	1 cut(s)	662
AcsI	RAATTY	4 cut(s)	335, 699, 835, 1093
AcyI	GRCGYC	2 cut(s)	939, 1359
AfaI	GTAC	4 cut(s)	116, 828, 857, 1340
AfiI	CCNNNNNNNGG	6 cut(s)	85, 86, 627, 628, 666, 1171
AflIII	ACRYGT	1 cut(s)	513
AgeI	ACCGGT	1 cut(s)	407
AgsI	TTSAA	3 cut(s)	128, 509, 533
AjnI	CCWGG	3 cut(s)	650, 711, 1164
AjuI	GAANNNNNNNTTGG	2 cut(s)	548, 580
AleI	CACNNNNGTG	1 cut(s)	1150
AluBI	AGCT	7 cut(s)	162, 289, 432, 756, 1105, 1282, 1290
AluI	AGCT	7 cut(s)	162, 289, 432, 756, 1105, 1282, 1290
Alw21I	GWGCWC	3 cut(s)	164, 291, 1140
Alw26I	GTCTC	2 cut(s)	610, 987
AlwI	GGATC	1 cut(s)	662
Ama87I	CYCGRG	1 cut(s)	290
Aor13HI	TCCGGA	1 cut(s)	520
AoxI	GGCC	2 cut(s)	3, 170
ApeKI	GCWGC	9 cut(s)	184, 218, 597, 643, 753, 1010, 1028, 1215, 1279
ApoI	RAATTY	4 cut(s)	335, 699, 835, 1093
ArsI	GACNNNNNNTTYG	2 cut(s)	710, 742
AsiGI	ACCGGT	1 cut(s)	407
AspLEI	GCGC	2 cut(s)	328, 400
AspS9I	GGNCC	3 cut(s)	4, 552, 1111
AsuC2I	CCSGG	3 cut(s)	684, 773, 900
AsuHPI	GGTGA	6 cut(s)	178, 187, 625, 649, 772, 1060
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	2 cut(s)	552, 1111
AxyI	CCTNAGG	2 cut(s)	237, 623
BaeGI	GKGCMC	1 cut(s)	1157
BaeI	ACNNNNGTAYC	2 cut(s)	481, 514
BanI	GGYRCC	1 cut(s)	1152
BanII	GRGCYC	3 cut(s)	164, 291, 634
BbsI	GAAGAC	1 cut(s)	953
Bbv12I	GWGCWC	3 cut(s)	164, 291, 1140
BbvI	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1227, 1291
BccI	CCATC	4 cut(s)	575, 734, 1238, 1366
BceAI	ACGGC	1 cut(s)	122
BcgI	CGANNNNNNTGC	2 cut(s)	331, 365
BciT130I	CCWGG	3 cut(s)	652, 713, 1166
BciVI	GTATCC	2 cut(s)	430, 509
BcnI	CCSGG	3 cut(s)	684, 773, 900
BcoDI	GTCTC	2 cut(s)	610, 987
BfaI	CTAG	1 cut(s)	1064
BfmI	CTRYAG	3 cut(s)	418, 1011, 1277
BfoI	RGCGCY	1 cut(s)	329
BfuI	GTATCC	2 cut(s)	430, 509
BglII	AGATCT	1 cut(s)	692
Bme1390I	CCNGG	6 cut(s)	652, 684, 713, 773, 900, 1166
Bme18I	GGWCC	2 cut(s)	552, 1111
BmeT110I	CYCGRG	1 cut(s)	290
BmgT120I	GGNCC	3 cut(s)	4, 552, 1111
BmiI	GGNNCC	2 cut(s)	770, 1154
BmrFI	CCNGG	6 cut(s)	652, 684, 713, 773, 900, 1166
BmsI	GCATC	3 cut(s)	514, 595, 1187
BpiI	GAAGAC	1 cut(s)	953
BplI	GAGNNNNNCTC	2 cut(s)	616, 648
Bpu10I	CCTNAGC	1 cut(s)	948
BpuEI	CTTGAG	4 cut(s)	329, 350, 620, 1127
BpuMI	CCSGG	3 cut(s)	684, 773, 900
Bsa29I	ATCGAT	1 cut(s)	109
BsaBI	GATNNNNATC	1 cut(s)	585
BsaHI	GRCGYC	2 cut(s)	939, 1359
BsaI	GGTCTC	2 cut(s)	610, 987
BsaJI	CCNNGG	6 cut(s)	683, 899, 942, 1032, 1124, 1148
BsaWI	WCCGGW	6 cut(s)	407, 440, 520, 659, 703, 1113
BsaXI	ACNNNNNCTCC	4 cut(s)	40, 70, 217, 247
Bsc4I	CCNNNNNNNGG	6 cut(s)	85, 86, 627, 628, 666, 1171
Bse118I	RCCGGY	2 cut(s)	172, 407
Bse1I	ACTGG	2 cut(s)	741, 1087
Bse21I	CCTNAGG	2 cut(s)	237, 623
Bse3DI	GCAATG	2 cut(s)	354, 1176
Bse8I	GATNNNNATC	1 cut(s)	585
BseAI	TCCGGA	1 cut(s)	520
BseBI	CCWGG	3 cut(s)	652, 713, 1166
BseCI	ATCGAT	1 cut(s)	109
BseDI	CCNNGG	6 cut(s)	683, 899, 942, 1032, 1124, 1148
BseGI	GGATG	4 cut(s)	382, 529, 586, 745
BseJI	GATNNNNATC	1 cut(s)	585
BseLI	CCNNNNNNNGG	6 cut(s)	85, 86, 627, 628, 666, 1171
BseMI	GCAATG	2 cut(s)	354, 1176
BseMII	CTCAG	5 cut(s)	78, 164, 228, 614, 1340
BseNI	ACTGG	2 cut(s)	741, 1087
BseRI	GAGGAG	4 cut(s)	52, 172, 640, 1005
BseSI	GKGCMC	1 cut(s)	1157
BseXI	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1227, 1291
BsgI	GTGCAG	2 cut(s)	203, 827
Bsh1236I	CGCG	2 cut(s)	603, 788
Bsh1285I	CGRYCG	1 cut(s)	113
BshFI	GGCC	2 cut(s)	5, 172
BshNI	GGYRCC	1 cut(s)	1152
BshTI	ACCGGT	1 cut(s)	407
BshVI	ATCGAT	1 cut(s)	109
BsiEI	CGRYCG	1 cut(s)	113
BsiHKAI	GWGCWC	3 cut(s)	164, 291, 1140
BsiHKCI	CYCGRG	1 cut(s)	290
BsiWI	CGTACG	1 cut(s)	114
BslFI	GGGAC	3 cut(s)	700, 747, 1370
BslI	CCNNNNNNNGG	6 cut(s)	85, 86, 627, 628, 666, 1171
BsmAI	GTCTC	2 cut(s)	610, 987
BsmFI	GGGAC	3 cut(s)	700, 747, 1370
BsmI	GAATGC	2 cut(s)	301, 959
BsnI	GGCC	2 cut(s)	5, 172
Bso31I	GGTCTC	2 cut(s)	610, 987
BsoBI	CYCGRG	1 cut(s)	290
Bsp1286I	GDGCHC	5 cut(s)	164, 291, 634, 1140, 1157
Bsp13I	TCCGGA	1 cut(s)	520
Bsp143I	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
Bsp19I	CCATGG	1 cut(s)	1124
BspANI	GGCC	2 cut(s)	5, 172
BspCNI	CTCAG	5 cut(s)	77, 163, 229, 615, 1339
BspDI	ATCGAT	1 cut(s)	109
BspEI	TCCGGA	1 cut(s)	520
BspFNI	CGCG	2 cut(s)	603, 788
BspHI	TCATGA	1 cut(s)	793
BspLI	GGNNCC	2 cut(s)	770, 1154
BspMAI	CTGCAG	2 cut(s)	1015, 1281
BspPI	GGATC	1 cut(s)	662
BspT107I	GGYRCC	1 cut(s)	1152
BspTNI	GGTCTC	2 cut(s)	610, 987
BsrBI	CCGCTC	1 cut(s)	371
BsrDI	GCAATG	2 cut(s)	354, 1176
BsrFI	RCCGGY	2 cut(s)	172, 407
BsrI	ACTGG	2 cut(s)	741, 1087
BssAI	RCCGGY	2 cut(s)	172, 407
BssECI	CCNNGG	6 cut(s)	683, 899, 942, 1032, 1124, 1148
BssMI	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
BssNI	GRCGYC	2 cut(s)	939, 1359
BssT1I	CCWWGG	2 cut(s)	942, 1124
Bst2UI	CCWGG	3 cut(s)	652, 713, 1166
Bst4CI	ACNGT	4 cut(s)	119, 229, 481, 1149
Bst6I	CTCTTC	3 cut(s)	1310, 1327, 1346
BstACI	GRCGYC	2 cut(s)	939, 1359
BstC8I	GCNNGC	4 cut(s)	648, 751, 816, 875
BstDEI	CTNAG	6 cut(s)	64, 150, 237, 623, 948, 1326
BstDSI	CCRYGG	3 cut(s)	1032, 1124, 1148
BstF5I	GGATG	4 cut(s)	382, 529, 586, 745
BstFNI	CGCG	2 cut(s)	603, 788
BstH2I	RGCGCY	1 cut(s)	329
BstHHI	GCGC	2 cut(s)	328, 400
BstKTI	GATC	7 cut(s)	39, 109, 113, 657, 676, 695, 1335
BstMAI	GTCTC	2 cut(s)	610, 987
BstMBI	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
BstMCI	CGRYCG	1 cut(s)	113
BstMWI	GCNNNNNNNGC	6 cut(s)	190, 278, 785, 879, 1161, 1175
BstNI	CCWGG	3 cut(s)	652, 713, 1166
BstNSI	RCATGY	1 cut(s)	517
BstSCI	CCNGG	6 cut(s)	650, 682, 711, 771, 898, 1164
BstSFI	CTRYAG	3 cut(s)	418, 1011, 1277
BstSLI	GKGCMC	1 cut(s)	1157
BstUI	CGCG	2 cut(s)	603, 788
BstV1I	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1227, 1291
BstV2I	GAAGAC	1 cut(s)	953
BstX2I	RGATCY	1 cut(s)	692
BstYI	RGATCY	1 cut(s)	692
Bsu15I	ATCGAT	1 cut(s)	109
Bsu36I	CCTNAGG	2 cut(s)	237, 623
BsuI	GTATCC	2 cut(s)	430, 509
BsuRI	GGCC	2 cut(s)	5, 172
BsuTUI	ATCGAT	1 cut(s)	109
BtgI	CCRYGG	3 cut(s)	1032, 1124, 1148
BtsCI	GGATG	4 cut(s)	382, 529, 586, 745
BtsI	GCAGTG	1 cut(s)	839
BtsIMutI	CAGTG	1 cut(s)	839
Cac8I	GCNNGC	4 cut(s)	648, 751, 816, 875
CciI	TCATGA	1 cut(s)	793
CfoI	GCGC	2 cut(s)	328, 400
Cfr10I	RCCGGY	2 cut(s)	172, 407
Cfr13I	GGNCC	3 cut(s)	4, 552, 1111
ClaI	ATCGAT	1 cut(s)	109
CseI	GACGC	1 cut(s)	947
Csp6I	GTAC	4 cut(s)	115, 827, 856, 1339
CspAI	ACCGGT	1 cut(s)	407
CviAII	CATG	7 cut(s)	514, 794, 820, 879, 908, 1006, 1125
CviQI	GTAC	4 cut(s)	115, 827, 856, 1339
DdeI	CTNAG	6 cut(s)	64, 150, 237, 623, 948, 1326
DpnI	GATC	7 cut(s)	38, 108, 112, 656, 675, 694, 1334
DpnII	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
Eam1104I	CTCTTC	3 cut(s)	1310, 1327, 1346
EarI	CTCTTC	3 cut(s)	1310, 1327, 1346
Ecl136II	GAGCTC	2 cut(s)	162, 289
Eco130I	CCWWGG	2 cut(s)	942, 1124
Eco24I	GRGCYC	3 cut(s)	164, 291, 634
Eco31I	GGTCTC	2 cut(s)	610, 987
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	2 cut(s)	552, 1111
Eco53kI	GAGCTC	2 cut(s)	162, 289
Eco81I	CCTNAGG	2 cut(s)	237, 623
Eco88I	CYCGRG	1 cut(s)	290
EcoICRI	GAGCTC	2 cut(s)	162, 289
EcoRI	GAATTC	1 cut(s)	835
EcoRII	CCWGG	3 cut(s)	650, 711, 1164
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	2 cut(s)	942, 1124
EcoT38I	GRGCYC	3 cut(s)	164, 291, 634
ErhI	CCWWGG	2 cut(s)	942, 1124
FaeI	CATG	7 cut(s)	517, 797, 823, 882, 911, 1009, 1128
FaqI	GGGAC	3 cut(s)	700, 747, 1370
FatI	CATG	7 cut(s)	513, 793, 819, 878, 907, 1005, 1124
FauI	CCCGC	3 cut(s)	87, 781, 1201
FauNDI	CATATG	1 cut(s)	800
FblI	GTMKAC	2 cut(s)	412, 717
FokI	GGATG	4 cut(s)	389, 536, 593, 752
FriOI	GRGCYC	3 cut(s)	164, 291, 634
FspAI	RTGCGCAY	1 cut(s)	399
FspBI	CTAG	1 cut(s)	1064
FspI	TGCGCA	1 cut(s)	399
GlaI	GCGC	2 cut(s)	327, 399
HaeII	RGCGCY	1 cut(s)	329
HaeIII	GGCC	2 cut(s)	5, 172
HgaI	GACGC	1 cut(s)	947
HhaI	GCGC	2 cut(s)	328, 400
Hin1I	GRCGYC	2 cut(s)	939, 1359
Hin1II	CATG	7 cut(s)	517, 797, 823, 882, 911, 1009, 1128
Hin6I	GCGC	2 cut(s)	326, 398
HinP1I	GCGC	2 cut(s)	326, 398
HincII	GTYRAC	1 cut(s)	718
HindII	GTYRAC	1 cut(s)	718
HindIII	AAGCTT	2 cut(s)	1103, 1288
HinfI	GANTC	4 cut(s)	200, 1016, 1060, 1364
HphI	GGTGA	6 cut(s)	178, 187, 625, 649, 772, 1060
Hpy166II	GTNNAC	2 cut(s)	413, 718
Hpy188I	TCNGA	3 cut(s)	67, 697, 1238
Hpy188III	TCNNGA	7 cut(s)	236, 292, 308, 484, 521, 590, 794
Hpy8I	GTNNAC	2 cut(s)	413, 718
Hpy99I	CGWCG	1 cut(s)	1364
HpyAV	CCTTC	7 cut(s)	61, 222, 438, 604, 911, 915, 980
HpyCH4III	ACNGT	4 cut(s)	119, 229, 481, 1149
HpyCH4IV	ACGT	2 cut(s)	143, 1359
HpyCH4V	TGCA	7 cut(s)	184, 272, 844, 882, 1013, 1145, 1279
HpyF10VI	GCNNNNNNNGC	6 cut(s)	190, 278, 785, 879, 1161, 1175
HpyF3I	CTNAG	6 cut(s)	64, 150, 237, 623, 948, 1326
HpySE526I	ACGT	2 cut(s)	143, 1359
Hsp92I	GRCGYC	2 cut(s)	939, 1359
Hsp92II	CATG	7 cut(s)	517, 797, 823, 882, 911, 1009, 1128
HspAI	GCGC	2 cut(s)	326, 398
Kpn2I	TCCGGA	1 cut(s)	520
Kzo9I	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
LmnI	GCTCC	5 cut(s)	159, 195, 238, 368, 1212
Lsp1109I	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1227, 1291
LweI	GCATC	3 cut(s)	514, 595, 1187
MaeI	CTAG	1 cut(s)	1064
MaeII	ACGT	2 cut(s)	143, 1359
MaeIII	GTNAC	3 cut(s)	13, 139, 1066
MalI	GATC	7 cut(s)	38, 108, 112, 656, 675, 694, 1334
MbiI	CCGCTC	1 cut(s)	371
MboI	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
MboII	GAAGA	6 cut(s)	15, 953, 1297, 1300, 1314, 1363
MfeI	CAATTG	3 cut(s)	83, 275, 864
MflI	RGATCY	1 cut(s)	692
MhlI	GDGCHC	5 cut(s)	164, 291, 634, 1140, 1157
MluCI	AATT	7 cut(s)	83, 275, 335, 699, 835, 864, 1093
MlyI	GAGTC	2 cut(s)	209, 1025
MroI	TCCGGA	1 cut(s)	520
MseI	TTAA	3 cut(s)	404, 978, 1073
MslI	CAYNNNNRTG	1 cut(s)	1150
MspA1I	CMGCKG	3 cut(s)	154, 187, 366
MspR9I	CCNGG	6 cut(s)	652, 684, 713, 773, 900, 1166
MunI	CAATTG	3 cut(s)	83, 275, 864
Mva1269I	GAATGC	2 cut(s)	301, 959
MvaI	CCWGG	3 cut(s)	652, 713, 1166
MvnI	CGCG	2 cut(s)	603, 788
MwoI	GCNNNNNNNGC	6 cut(s)	190, 278, 785, 879, 1161, 1175
NciI	CCSGG	3 cut(s)	684, 773, 900
NcoI	CCATGG	1 cut(s)	1124
NdeI	CATATG	1 cut(s)	800
NdeII	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
NlaIII	CATG	7 cut(s)	517, 797, 823, 882, 911, 1009, 1128
NlaIV	GGNNCC	2 cut(s)	770, 1154
NmuCI	GTSAC	2 cut(s)	139, 1066
NsbI	TGCGCA	1 cut(s)	399
NspI	RCATGY	1 cut(s)	517
OliI	CACNNNNGTG	1 cut(s)	1150
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	1 cut(s)	793
PciI	ACATGT	1 cut(s)	513
PctI	GAATGC	2 cut(s)	301, 959
PfeI	GAWTC	2 cut(s)	1060, 1364
Pfl23II	CGTACG	1 cut(s)	114
PflFI	GACNNNGTC	1 cut(s)	479
PflMI	CCANNNNNTGG	1 cut(s)	1171
PinAI	ACCGGT	1 cut(s)	407
Ple19I	CGATCG	1 cut(s)	113
PleI	GAGTC	2 cut(s)	208, 1024
PpsI	GAGTC	2 cut(s)	208, 1024
PscI	ACATGT	1 cut(s)	513
Psp124BI	GAGCTC	2 cut(s)	164, 291
Psp6I	CCWGG	3 cut(s)	650, 711, 1164
PspGI	CCWGG	3 cut(s)	650, 711, 1164
PspLI	CGTACG	1 cut(s)	114
PspN4I	GGNNCC	2 cut(s)	770, 1154
PspPI	GGNCC	3 cut(s)	4, 552, 1111
PstI	CTGCAG	2 cut(s)	1015, 1281
PsuI	RGATCY	1 cut(s)	692
PsyI	GACNNNGTC	1 cut(s)	479
PvuI	CGATCG	1 cut(s)	113
RsaI	GTAC	4 cut(s)	116, 828, 857, 1340
RsaNI	GTAC	4 cut(s)	115, 827, 856, 1339
RseI	CAYNNNNRTG	1 cut(s)	1150
SacI	GAGCTC	2 cut(s)	164, 291
SalI	GTCGAC	1 cut(s)	716
SaqAI	TTAA	3 cut(s)	404, 978, 1073
Sau3AI	GATC	7 cut(s)	36, 106, 110, 654, 673, 692, 1332
Sau96I	GGNCC	3 cut(s)	4, 552, 1111
SchI	GAGTC	2 cut(s)	209, 1025
ScrFI	CCNGG	6 cut(s)	652, 684, 713, 773, 900, 1166
SduI	GDGCHC	5 cut(s)	164, 291, 634, 1140, 1157
SfaNI	GCATC	3 cut(s)	514, 595, 1187
SfcI	CTRYAG	3 cut(s)	418, 1011, 1277
Sfr274I	CTCGAG	1 cut(s)	290
SinI	GGWCC	2 cut(s)	552, 1111
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	1 cut(s)	1150
SmlI	CTYRAG	5 cut(s)	290, 308, 329, 635, 1106
SmoI	CTYRAG	5 cut(s)	290, 308, 329, 635, 1106
Sse9I	AATT	7 cut(s)	83, 275, 335, 699, 835, 864, 1093
SspI	AATATT	1 cut(s)	976
SspMI	CTAG	1 cut(s)	1064
SstI	GAGCTC	2 cut(s)	164, 291
StyD4I	CCNGG	6 cut(s)	650, 682, 711, 771, 898, 1164
StyI	CCWWGG	2 cut(s)	942, 1124
TaaI	ACNGT	4 cut(s)	119, 229, 481, 1149
TaiI	ACGT	2 cut(s)	146, 1362
TaqI	TCGA	8 cut(s)	35, 109, 291, 483, 717, 729, 848, 1362
TasI	AATT	7 cut(s)	83, 275, 335, 699, 835, 864, 1093
TauI	GCSGC	1 cut(s)	603
TfiI	GAWTC	2 cut(s)	1060, 1364
Tru1I	TTAA	3 cut(s)	404, 978, 1073
Tru9I	TTAA	3 cut(s)	404, 978, 1073
TscAI	CASTG	1 cut(s)	846
TseFI	GTSAC	2 cut(s)	139, 1066
TseI	GCWGC	9 cut(s)	184, 218, 597, 643, 753, 1010, 1028, 1215, 1279
Tsp45I	GTSAC	2 cut(s)	139, 1066
TspDTI	ATGAA	3 cut(s)	15, 836, 1356
TspGWI	ACGGA	2 cut(s)	1049, 1361
TspRI	CASTG	1 cut(s)	846
Tth111I	GACNNNGTC	1 cut(s)	479
Van91I	CCANNNNNTGG	1 cut(s)	1171
VpaK11BI	GGWCC	2 cut(s)	552, 1111
XapI	RAATTY	4 cut(s)	335, 699, 835, 1093
XceI	RCATGY	1 cut(s)	517
XhoI	CTCGAG	1 cut(s)	290
XmiI	GTMKAC	2 cut(s)	412, 717
XspI	CTAG	1 cut(s)	1064
ZraI	GACGTC	1 cut(s)	1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.