Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0007763

Physical Location & Seq

Genomic Coordinates Forward (+)

31282635 .. 31285279

Gene Structure 2645 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g31570.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGACCACCAAGGGAAGGGAAAGGCTGCTCAATCGCTTCCATGTACTTTCCCACCACCCGGCAGGCAGGGACTCTCTAGGCCCGGGCCCACACCACGTGACGAAAGCGATGACTACATAGATCGAGGCTCTCGCTGTTACTTCTTCTTCATCTGCTTCGATCTCTGGTCGCACCTTCACTCCCTCCTCAGAACCCAAAGGCGAATTAACGAGTTAGGATTTCGGGTTTTGGAATTTGCAGCACCGCAATTGGCTTCTATTCGGGTGTTTGATCGATCGTACGGTCAAATTCAACGCCAAGCCGTGACGTTTTCTCAACGGCGGAGCTCGGTGAGGCCGGTGAATGTGCAGCCGAAGCGGAGCGAGTCCATTTTTCCTTCCGCAGCGACAACCGTTGCTCCTGAGGTGGTTGAGAAAGTAGAGGTGGAGGACTATGCGCAATTGGCTAAAGAGCTCGAGAATGCTTCCCCTCTCGAGATTATGGACAAGGCGCTTGAGAAATTCGGCAACGATATCGCCATTGCTTTCAGTGGAGCGGAGGATGTAGCTTTGATTGAGTATGCACATTTAACCGGTAGACCCTATAGGGTTTTCAGCTTGGATACCGGAAGGCTGAACCCTGAAACATATCAGTTCTTTGACACAGTCGAGAAGCACTATGGCATCCGCATTGAATACATGTTTCCGGATGCTGTTGAAGTTCAGGCATTAGTAAGGACCAAAGGGCTGTTCTCTTTCTATGAGGATGGGCATCAGGAGTGCTGCCGCGTGAGGAAGGTGAGACCCCTGAGGAGGGCTCTCAAGGGGCTACGCGCCTGGATCACCGGACAAAGGAAAGATCAATCTCCAGGGACTAGATCTGAAATTCCGGTTGTCCAGGTCGACCCTGTTTTCGAGGGACTGGATGGTGGTGCTGGCAGCTTGGTGAAGTGGAACCCAGTGGCAAATGTCGCGGGTCATGACATATGGAACTTTCTGCGTGCCATGAATGTACCTGTGAATTCACTGCACTCGCAAGGGTACATCTCAATTGGTTGCGAGCCATGCACAAGGTCAGTCCTACCGGGGCAACATGAGAGAGAAGGAAGGTGGTGGTGGGAGGACGCCAAGGCGAAGGAATGCGGTCTTCACAAAGGCAATATTAAACAGGAAGGAGGCCAAAATGGCATGGCTGCACAGTCAGATGGTGCTGCCACGGAAACTGATATATTCACTTCCCAGAATCTAGTCACCTTAACCCGAACTGGAATAGAAAATTTGGCAAAACTTGAGGACCGGAAAGAACCATGGATTGTAGTGCTCTATGCACCGTGGTGCCCGTTTTGCCAGGCAATGGAAGCATCATTCGTTGAGTTGGCTGACAAGTTGGCGGGGAGCAGTGTGAAAGTGGGCAAGTTCAGAGCAGATGGAGAGCAAAAGGAGTTTGCCCAGAAAGAACTGCAGCTCACAAGCTTCCCCACAATACTCTTCTTCCCCAAACACTCTTCTCAGCCGATCAAGTACCCAACGGAGAAGAGGGACGTCGATTCATTGATGGCGTTCGTCAATGCCCTTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0003674 GO:0003824 GO:0004604 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006790 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009973 GO:0009987 GO:0016491 GO:0016667 GO:0016671 GO:0019379 GO:0019419 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00920 ko01120 map00920 map01120

Pfam Domains

Protein Families

PAPS_reduct Thioredoxin

Protein Analysis

520

Amino Acids

58.44

Weight (kDa)

7.15

Isoelectric Point (pI)

52.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62180 AT1G62180 AT4G04610 AT4G21990 AT4G21990
fragaria_vesca	FvH4_3g01900
malus_domestica	MD03G1198900.v1.1 MD05G1348200.v1.1 MD10G1323000.v1.1 MD11G1215200.v1.1
prunus_persica	Prupe.4G019200_v2.0.a1 Prupe.4G216100_v2.0.a1
pyrus_communis	pycom03g15040 pycom05g31570 pycom10g27340
rosa_chinensis	RchiOBHm_Chr5g0002761
rosa_laevigata	RLG00000031056
rosa_multiflora	Rmu_sc0013603.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073140
rosa_rugosa	Rorug04G0399100
rosa_samantha	Rh5AG022200 Rh5BG025100 Rh5DG023500
rosa_wichuraiana	Rw5G002070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1524
Acc16I	TGCGCA	1 cut(s)	438
AccB1I	GGYRCC	1 cut(s)	1314
AccB7I	CCANNNNNTGG	1 cut(s)	1333
AccBSI	CCGCTC	1 cut(s)	536
AccI	GTMKAC	2 cut(s)	577, 882
AccII	CGCG	3 cut(s)	768, 813, 953
AccIII	TCCGGA	1 cut(s)	685
AclWI	GGATC	1 cut(s)	827
AcsI	RAATTY	6 cut(s)	233, 288, 500, 864, 1000, 1255
AcvI	CACGTG	1 cut(s)	98
AcyI	GRCGYC	2 cut(s)	1104, 1521
AdeI	CACNNNGTG	1 cut(s)	98
AfaI	GTAC	5 cut(s)	46, 281, 993, 1022, 1502
AfiI	CCNNNNNNNGG	6 cut(s)	16, 59, 792, 793, 831, 1333
AflIII	ACRYGT	1 cut(s)	678
AgeI	ACCGGT	1 cut(s)	572
AgsI	TTSAA	3 cut(s)	293, 674, 698
AjnI	CCWGG	4 cut(s)	815, 847, 876, 1326
AjuI	GAANNNNNNNTTGG	2 cut(s)	713, 745
AleI	CACNNNNGTG	1 cut(s)	1312
AluBI	AGCT	7 cut(s)	327, 454, 548, 597, 921, 1444, 1452
AluI	AGCT	7 cut(s)	327, 454, 548, 597, 921, 1444, 1452
Alw21I	GWGCWC	3 cut(s)	329, 456, 1302
Alw26I	GTCTC	1 cut(s)	775
AlwI	GGATC	1 cut(s)	827
Ama87I	CYCGRG	3 cut(s)	83, 455, 473
Aor13HI	TCCGGA	1 cut(s)	685
AoxI	GGCC	4 cut(s)	80, 86, 335, 1156
ApaI	GGGCCC	1 cut(s)	90
ApeKI	GCWGC	9 cut(s)	26, 239, 349, 383, 762, 918, 1172, 1190, 1441
ApoI	RAATTY	6 cut(s)	233, 288, 500, 864, 1000, 1255
ArsI	GACNNNNNNTTYG	2 cut(s)	875, 907
AsiGI	ACCGGT	1 cut(s)	572
AspLEI	GCGC	3 cut(s)	439, 493, 815
AspS9I	GGNCC	6 cut(s)	4, 81, 86, 87, 717, 1273
AsuC2I	CCSGG	4 cut(s)	60, 84, 85, 1065
AsuHPI	GGTGA	6 cut(s)	343, 352, 790, 814, 937, 1222
AvaI	CYCGRG	3 cut(s)	83, 455, 473
AvaII	GGWCC	3 cut(s)	4, 717, 1273
AxyI	CCTNAGG	3 cut(s)	402, 788, 1553
BaeGI	GKGCMC	2 cut(s)	90, 1319
BanI	GGYRCC	1 cut(s)	1314
BanII	GRGCYC	4 cut(s)	90, 329, 456, 799
BbrPI	CACGTG	1 cut(s)	98
BbsI	GAAGAC	1 cut(s)	1118
Bbv12I	GWGCWC	3 cut(s)	329, 456, 1302
BbvI	GCAGC	9 cut(s)	13, 251, 361, 395, 749, 930, 1159, 1177, 1453
BccI	CCATC	5 cut(s)	740, 899, 1178, 1400, 1528
BceAI	ACGGC	2 cut(s)	287, 335
BcgI	CGANNNNNNTGC	2 cut(s)	496, 530
BciT130I	CCWGG	4 cut(s)	817, 849, 878, 1328
BciVI	GTATCC	1 cut(s)	595
BcnI	CCSGG	4 cut(s)	60, 84, 85, 1065
BcoDI	GTCTC	1 cut(s)	775
BfaI	CTAG	3 cut(s)	78, 855, 1226
BfmI	CTRYAG	2 cut(s)	583, 1439
BfoI	RGCGCY	1 cut(s)	494
BfuI	GTATCC	1 cut(s)	595
BglI	GCCNNNNNGGC	1 cut(s)	1164
BglII	AGATCT	1 cut(s)	857
Bme1390I	CCNGG	8 cut(s)	60, 84, 85, 817, 849, 878, 1065, 1328
Bme18I	GGWCC	3 cut(s)	4, 717, 1273
BmeT110I	CYCGRG	3 cut(s)	83, 455, 473
BmgT120I	GGNCC	6 cut(s)	4, 81, 86, 87, 717, 1273
BmiI	GGNNCC	3 cut(s)	88, 935, 1316
BmrFI	CCNGG	8 cut(s)	60, 84, 85, 817, 849, 878, 1065, 1328
BmrI	ACTGGG	1 cut(s)	932
BmsI	GCATC	4 cut(s)	672, 679, 760, 1349
BmuI	ACTGGG	1 cut(s)	932
BpiI	GAAGAC	1 cut(s)	1118
BplI	GAGNNNNNCTC	2 cut(s)	781, 813
BpmI	CTGGAG	1 cut(s)	831
BpuEI	CTTGAG	3 cut(s)	515, 785, 1289
BpuMI	CCSGG	4 cut(s)	60, 84, 85, 1065
Bsa29I	ATCGAT	1 cut(s)	274
BsaAI	YACGTR	1 cut(s)	98
BsaBI	GATNNNNATC	1 cut(s)	750
BsaHI	GRCGYC	2 cut(s)	1104, 1521
BsaI	GGTCTC	1 cut(s)	775
BsaJI	CCNNGG	8 cut(s)	10, 83, 848, 1064, 1107, 1194, 1286, 1310
BsaWI	WCCGGW	6 cut(s)	572, 605, 685, 824, 868, 1275
BsaXI	ACNNNNNCTCC	4 cut(s)	164, 194, 382, 412
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 59, 792, 793, 831, 1333
Bse118I	RCCGGY	2 cut(s)	337, 572
Bse1I	ACTGG	3 cut(s)	906, 938, 1249
Bse21I	CCTNAGG	3 cut(s)	402, 788, 1553
Bse3DI	GCAATG	2 cut(s)	519, 1338
Bse8I	GATNNNNATC	1 cut(s)	750
BseAI	TCCGGA	1 cut(s)	685
BseBI	CCWGG	4 cut(s)	817, 849, 878, 1328
BseCI	ATCGAT	1 cut(s)	274
BseDI	CCNNGG	8 cut(s)	10, 83, 848, 1064, 1107, 1194, 1286, 1310
BseGI	GGATG	5 cut(s)	547, 663, 694, 751, 910
BseJI	GATNNNNATC	1 cut(s)	750
BseLI	CCNNNNNNNGG	6 cut(s)	16, 59, 792, 793, 831, 1333
BseMI	GCAATG	2 cut(s)	519, 1338
BseMII	CTCAG	4 cut(s)	202, 393, 779, 1502
BseNI	ACTGG	3 cut(s)	906, 938, 1249
BseRI	GAGGAG	2 cut(s)	176, 805
BseSI	GKGCMC	2 cut(s)	90, 1319
BseXI	GCAGC	9 cut(s)	13, 251, 361, 395, 749, 930, 1159, 1177, 1453
BsgI	GTGCAG	3 cut(s)	368, 992, 1158
Bsh1236I	CGCG	3 cut(s)	768, 813, 953
Bsh1285I	CGRYCG	1 cut(s)	278
BshFI	GGCC	4 cut(s)	82, 88, 337, 1158
BshNI	GGYRCC	1 cut(s)	1314
BshTI	ACCGGT	1 cut(s)	572
BshVI	ATCGAT	1 cut(s)	274
BsiEI	CGRYCG	1 cut(s)	278
BsiHKAI	GWGCWC	3 cut(s)	329, 456, 1302
BsiHKCI	CYCGRG	3 cut(s)	83, 455, 473
BsiWI	CGTACG	1 cut(s)	279
BslFI	GGGAC	4 cut(s)	84, 865, 912, 1532
BslI	CCNNNNNNNGG	6 cut(s)	16, 59, 792, 793, 831, 1333
BsmAI	GTCTC	1 cut(s)	775
BsmFI	GGGAC	4 cut(s)	84, 865, 912, 1532
BsmI	GAATGC	2 cut(s)	466, 1124
BsnI	GGCC	4 cut(s)	82, 88, 337, 1158
Bso31I	GGTCTC	1 cut(s)	775
BsoBI	CYCGRG	3 cut(s)	83, 455, 473
Bsp120I	GGGCCC	1 cut(s)	86
Bsp1286I	GDGCHC	6 cut(s)	90, 329, 456, 799, 1302, 1319
Bsp13I	TCCGGA	1 cut(s)	685
Bsp143I	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
Bsp19I	CCATGG	1 cut(s)	1286
BspANI	GGCC	4 cut(s)	82, 88, 337, 1158
BspCNI	CTCAG	4 cut(s)	201, 394, 780, 1501
BspDI	ATCGAT	1 cut(s)	274
BspEI	TCCGGA	1 cut(s)	685
BspFNI	CGCG	3 cut(s)	768, 813, 953
BspHI	TCATGA	1 cut(s)	958
BspLI	GGNNCC	3 cut(s)	88, 935, 1316
BspMAI	CTGCAG	1 cut(s)	1443
BspPI	GGATC	1 cut(s)	827
BspT107I	GGYRCC	1 cut(s)	1314
BspTNI	GGTCTC	1 cut(s)	775
BsrBI	CCGCTC	1 cut(s)	536
BsrDI	GCAATG	2 cut(s)	519, 1338
BsrFI	RCCGGY	2 cut(s)	337, 572
BsrI	ACTGG	3 cut(s)	906, 938, 1249
BssAI	RCCGGY	2 cut(s)	337, 572
BssECI	CCNNGG	8 cut(s)	10, 83, 848, 1064, 1107, 1194, 1286, 1310
BssMI	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
BssNI	GRCGYC	2 cut(s)	1104, 1521
BssT1I	CCWWGG	3 cut(s)	10, 1107, 1286
Bst2UI	CCWGG	4 cut(s)	817, 849, 878, 1328
Bst4CI	ACNGT	5 cut(s)	284, 394, 646, 1179, 1311
Bst6I	CTCTTC	3 cut(s)	1472, 1489, 1508
BstACI	GRCGYC	2 cut(s)	1104, 1521
BstBAI	YACGTR	1 cut(s)	98
BstC8I	GCNNGC	4 cut(s)	65, 916, 981, 1040
BstDEI	CTNAG	5 cut(s)	188, 402, 788, 1488, 1553
BstDSI	CCRYGG	3 cut(s)	1194, 1286, 1310
BstF5I	GGATG	5 cut(s)	547, 663, 694, 751, 910
BstFNI	CGCG	3 cut(s)	768, 813, 953
BstH2I	RGCGCY	1 cut(s)	494
BstHHI	GCGC	3 cut(s)	439, 493, 815
BstKTI	GATC	8 cut(s)	124, 163, 274, 278, 822, 841, 860, 1497
BstMAI	GTCTC	1 cut(s)	775
BstMBI	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
BstMCI	CGRYCG	1 cut(s)	278
BstMWI	GCNNNNNNNGC	7 cut(s)	355, 443, 950, 1044, 1164, 1323, 1337
BstNI	CCWGG	4 cut(s)	817, 849, 878, 1328
BstNSI	RCATGY	1 cut(s)	682
BstSCI	CCNGG	8 cut(s)	58, 82, 83, 815, 847, 876, 1063, 1326
BstSFI	CTRYAG	2 cut(s)	583, 1439
BstSLI	GKGCMC	2 cut(s)	90, 1319
BstUI	CGCG	3 cut(s)	768, 813, 953
BstV1I	GCAGC	9 cut(s)	13, 251, 361, 395, 749, 930, 1159, 1177, 1453
BstV2I	GAAGAC	1 cut(s)	1118
BstX2I	RGATCY	1 cut(s)	857
BstYI	RGATCY	1 cut(s)	857
Bsu15I	ATCGAT	1 cut(s)	274
Bsu36I	CCTNAGG	3 cut(s)	402, 788, 1553
BsuI	GTATCC	1 cut(s)	595
BsuRI	GGCC	4 cut(s)	82, 88, 337, 1158
BsuTUI	ATCGAT	1 cut(s)	274
BtgI	CCRYGG	3 cut(s)	1194, 1286, 1310
BtgZI	GCGATG	1 cut(s)	123
BtsCI	GGATG	5 cut(s)	547, 663, 694, 751, 910
BtsI	GCAGTG	2 cut(s)	1004, 1384
BtsIMutI	CAGTG	4 cut(s)	535, 945, 1004, 1384
Cac8I	GCNNGC	4 cut(s)	65, 916, 981, 1040
CciI	TCATGA	1 cut(s)	958
CfoI	GCGC	3 cut(s)	439, 493, 815
Cfr10I	RCCGGY	2 cut(s)	337, 572
Cfr13I	GGNCC	6 cut(s)	4, 81, 86, 87, 717, 1273
Cfr9I	CCCGGG	1 cut(s)	83
ClaI	ATCGAT	1 cut(s)	274
CseI	GACGC	1 cut(s)	1112
Csp6I	GTAC	5 cut(s)	45, 280, 992, 1021, 1501
CspAI	ACCGGT	1 cut(s)	572
CviAII	CATG	8 cut(s)	42, 679, 959, 985, 1044, 1073, 1168, 1287
CviQI	GTAC	5 cut(s)	45, 280, 992, 1021, 1501
DdeI	CTNAG	5 cut(s)	188, 402, 788, 1488, 1553
DpnI	GATC	8 cut(s)	123, 162, 273, 277, 821, 840, 859, 1496
DpnII	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
DraIII	CACNNNGTG	1 cut(s)	98
Eam1104I	CTCTTC	3 cut(s)	1472, 1489, 1508
EarI	CTCTTC	3 cut(s)	1472, 1489, 1508
EciI	GGCGGA	1 cut(s)	337
Ecl136II	GAGCTC	2 cut(s)	327, 454
Eco130I	CCWWGG	3 cut(s)	10, 1107, 1286
Eco24I	GRGCYC	4 cut(s)	90, 329, 456, 799
Eco31I	GGTCTC	1 cut(s)	775
Eco32I	GATATC	1 cut(s)	514
Eco47I	GGWCC	3 cut(s)	4, 717, 1273
Eco53kI	GAGCTC	2 cut(s)	327, 454
Eco72I	CACGTG	1 cut(s)	98
Eco81I	CCTNAGG	3 cut(s)	402, 788, 1553
Eco88I	CYCGRG	3 cut(s)	83, 455, 473
EcoICRI	GAGCTC	2 cut(s)	327, 454
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	4 cut(s)	815, 847, 876, 1326
EcoRV	GATATC	1 cut(s)	514
EcoT14I	CCWWGG	3 cut(s)	10, 1107, 1286
EcoT38I	GRGCYC	4 cut(s)	90, 329, 456, 799
ErhI	CCWWGG	3 cut(s)	10, 1107, 1286
FaeI	CATG	8 cut(s)	45, 682, 962, 988, 1047, 1076, 1171, 1290
FaqI	GGGAC	4 cut(s)	84, 865, 912, 1532
FatI	CATG	8 cut(s)	41, 678, 958, 984, 1043, 1072, 1167, 1286
FauI	CCCGC	2 cut(s)	946, 1363
FauNDI	CATATG	1 cut(s)	965
FblI	GTMKAC	2 cut(s)	577, 882
FokI	GGATG	5 cut(s)	554, 650, 701, 758, 917
FriOI	GRGCYC	4 cut(s)	90, 329, 456, 799
FspBI	CTAG	3 cut(s)	78, 855, 1226
FspI	TGCGCA	1 cut(s)	438
GlaI	GCGC	3 cut(s)	438, 492, 814
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	494
HaeIII	GGCC	4 cut(s)	82, 88, 337, 1158
HgaI	GACGC	1 cut(s)	1112
HhaI	GCGC	3 cut(s)	439, 493, 815
Hin1I	GRCGYC	2 cut(s)	1104, 1521
Hin1II	CATG	8 cut(s)	45, 682, 962, 988, 1047, 1076, 1171, 1290
Hin6I	GCGC	3 cut(s)	437, 491, 813
HinP1I	GCGC	3 cut(s)	437, 491, 813
HincII	GTYRAC	1 cut(s)	883
HindII	GTYRAC	1 cut(s)	883
HindIII	AAGCTT	1 cut(s)	1450
HinfI	GANTC	4 cut(s)	72, 365, 1222, 1526
HphI	GGTGA	6 cut(s)	343, 352, 790, 814, 937, 1222
Hpy166II	GTNNAC	2 cut(s)	578, 883
Hpy188I	TCNGA	4 cut(s)	191, 862, 1183, 1400
Hpy188III	TCNNGA	8 cut(s)	401, 457, 473, 475, 649, 686, 755, 959
Hpy8I	GTNNAC	2 cut(s)	578, 883
Hpy99I	CGWCG	1 cut(s)	1526
HpyAV	CCTTC	9 cut(s)	10, 185, 387, 603, 769, 1076, 1080, 1108, 1145
HpyCH4III	ACNGT	5 cut(s)	284, 394, 646, 1179, 1311
HpyCH4IV	ACGT	3 cut(s)	97, 308, 1521
HpyCH4V	TGCA	8 cut(s)	239, 349, 563, 1009, 1047, 1175, 1307, 1441
HpyF10VI	GCNNNNNNNGC	7 cut(s)	355, 443, 950, 1044, 1164, 1323, 1337
HpyF3I	CTNAG	5 cut(s)	188, 402, 788, 1488, 1553
HpySE526I	ACGT	3 cut(s)	97, 308, 1521
Hsp92I	GRCGYC	2 cut(s)	1104, 1521
Hsp92II	CATG	8 cut(s)	45, 682, 962, 988, 1047, 1076, 1171, 1290
HspAI	GCGC	3 cut(s)	437, 491, 813
Kpn2I	TCCGGA	1 cut(s)	685
Kzo9I	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
LmnI	GCTCC	5 cut(s)	324, 360, 403, 533, 1374
Lsp1109I	GCAGC	9 cut(s)	13, 251, 361, 395, 749, 930, 1159, 1177, 1453
LweI	GCATC	4 cut(s)	672, 679, 760, 1349
MaeI	CTAG	3 cut(s)	78, 855, 1226
MaeII	ACGT	3 cut(s)	97, 308, 1521
MaeIII	GTNAC	4 cut(s)	98, 137, 304, 1228
MalI	GATC	8 cut(s)	123, 162, 273, 277, 821, 840, 859, 1496
MbiI	CCGCTC	1 cut(s)	536
MboI	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
MboII	GAAGA	7 cut(s)	136, 139, 1118, 1459, 1462, 1476, 1525
MfeI	CAATTG	3 cut(s)	248, 440, 1029
MflI	RGATCY	1 cut(s)	857
MhlI	GDGCHC	6 cut(s)	90, 329, 456, 799, 1302, 1319
MlyI	GAGTC	2 cut(s)	66, 374
MroI	TCCGGA	1 cut(s)	685
MseI	TTAA	4 cut(s)	207, 569, 1143, 1235
MslI	CAYNNNNRTG	1 cut(s)	1312
MspR9I	CCNGG	8 cut(s)	60, 84, 85, 817, 849, 878, 1065, 1328
MunI	CAATTG	3 cut(s)	248, 440, 1029
Mva1269I	GAATGC	2 cut(s)	466, 1124
MvaI	CCWGG	4 cut(s)	817, 849, 878, 1328
MvnI	CGCG	3 cut(s)	768, 813, 953
MwoI	GCNNNNNNNGC	7 cut(s)	355, 443, 950, 1044, 1164, 1323, 1337
NciI	CCSGG	4 cut(s)	60, 84, 85, 1065
NcoI	CCATGG	1 cut(s)	1286
NdeI	CATATG	1 cut(s)	965
NdeII	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
NlaIII	CATG	8 cut(s)	45, 682, 962, 988, 1047, 1076, 1171, 1290
NlaIV	GGNNCC	3 cut(s)	88, 935, 1316
NmuCI	GTSAC	3 cut(s)	98, 304, 1228
NsbI	TGCGCA	1 cut(s)	438
NspI	RCATGY	1 cut(s)	682
OliI	CACNNNNGTG	1 cut(s)	1312
PaeR7I	CTCGAG	2 cut(s)	455, 473
PagI	TCATGA	1 cut(s)	958
PciI	ACATGT	1 cut(s)	678
PctI	GAATGC	2 cut(s)	466, 1124
PfeI	GAWTC	2 cut(s)	1222, 1526
Pfl23II	CGTACG	1 cut(s)	279
PflFI	GACNNNGTC	1 cut(s)	644
PflMI	CCANNNNNTGG	1 cut(s)	1333
PinAI	ACCGGT	1 cut(s)	572
Ple19I	CGATCG	1 cut(s)	278
PleI	GAGTC	2 cut(s)	66, 373
PmaCI	CACGTG	1 cut(s)	98
PmlI	CACGTG	1 cut(s)	98
PpsI	GAGTC	2 cut(s)	66, 373
Ppu21I	YACGTR	1 cut(s)	98
PscI	ACATGT	1 cut(s)	678
Psp124BI	GAGCTC	2 cut(s)	329, 456
Psp6I	CCWGG	4 cut(s)	815, 847, 876, 1326
PspCI	CACGTG	1 cut(s)	98
PspGI	CCWGG	4 cut(s)	815, 847, 876, 1326
PspLI	CGTACG	1 cut(s)	279
PspN4I	GGNNCC	3 cut(s)	88, 935, 1316
PspOMI	GGGCCC	1 cut(s)	86
PspPI	GGNCC	6 cut(s)	4, 81, 86, 87, 717, 1273
PstI	CTGCAG	1 cut(s)	1443
PsuI	RGATCY	1 cut(s)	857
PsyI	GACNNNGTC	1 cut(s)	644
PvuI	CGATCG	1 cut(s)	278
RsaI	GTAC	5 cut(s)	46, 281, 993, 1022, 1502
RsaNI	GTAC	5 cut(s)	45, 280, 992, 1021, 1501
RseI	CAYNNNNRTG	1 cut(s)	1312
SacI	GAGCTC	2 cut(s)	329, 456
SalI	GTCGAC	1 cut(s)	881
SaqAI	TTAA	4 cut(s)	207, 569, 1143, 1235
Sau3AI	GATC	8 cut(s)	121, 160, 271, 275, 819, 838, 857, 1494
Sau96I	GGNCC	6 cut(s)	4, 81, 86, 87, 717, 1273
SchI	GAGTC	2 cut(s)	66, 374
ScrFI	CCNGG	8 cut(s)	60, 84, 85, 817, 849, 878, 1065, 1328
SduI	GDGCHC	6 cut(s)	90, 329, 456, 799, 1302, 1319
SfaNI	GCATC	4 cut(s)	672, 679, 760, 1349
SfcI	CTRYAG	2 cut(s)	583, 1439
Sfr274I	CTCGAG	2 cut(s)	455, 473
SinI	GGWCC	3 cut(s)	4, 717, 1273
SlaI	CTCGAG	2 cut(s)	455, 473
SmaI	CCCGGG	1 cut(s)	85
SmiMI	CAYNNNNRTG	1 cut(s)	1312
SmlI	CTYRAG	5 cut(s)	455, 473, 494, 800, 1268
SmoI	CTYRAG	5 cut(s)	455, 473, 494, 800, 1268
SrfI	GCCCGGGC	1 cut(s)	85
SspI	AATATT	1 cut(s)	1141
SspMI	CTAG	3 cut(s)	78, 855, 1226
SstI	GAGCTC	2 cut(s)	329, 456
StyD4I	CCNGG	8 cut(s)	58, 82, 83, 815, 847, 876, 1063, 1326
StyI	CCWWGG	3 cut(s)	10, 1107, 1286
TaaI	ACNGT	5 cut(s)	284, 394, 646, 1179, 1311
TaiI	ACGT	3 cut(s)	100, 311, 1524
TaqI	TCGA	9 cut(s)	124, 159, 274, 456, 474, 648, 882, 894, 1524
TatI	WGTACW	1 cut(s)	44
TauI	GCSGC	1 cut(s)	768
TfiI	GAWTC	2 cut(s)	1222, 1526
Tru1I	TTAA	4 cut(s)	207, 569, 1143, 1235
Tru9I	TTAA	4 cut(s)	207, 569, 1143, 1235
TscAI	CASTG	4 cut(s)	535, 945, 1011, 1384
TseFI	GTSAC	3 cut(s)	98, 304, 1228
TseI	GCWGC	9 cut(s)	26, 239, 349, 383, 762, 918, 1172, 1190, 1441
Tsp45I	GTSAC	3 cut(s)	98, 304, 1228
TspDTI	ATGAA	3 cut(s)	139, 1001, 1518
TspGWI	ACGGA	2 cut(s)	1211, 1523
TspMI	CCCGGG	1 cut(s)	83
TspRI	CASTG	4 cut(s)	535, 945, 1011, 1384
Tth111I	GACNNNGTC	1 cut(s)	644
Van91I	CCANNNNNTGG	1 cut(s)	1333
VpaK11BI	GGWCC	3 cut(s)	4, 717, 1273
XapI	RAATTY	6 cut(s)	233, 288, 500, 864, 1000, 1255
XceI	RCATGY	1 cut(s)	682
XhoI	CTCGAG	2 cut(s)	455, 473
XmaI	CCCGGG	1 cut(s)	83
XmiI	GTMKAC	2 cut(s)	577, 882
XspI	CTAG	3 cut(s)	78, 855, 1226
ZraI	GACGTC	1 cut(s)	1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.