Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0007763

Physical Location & Seq

Genomic Coordinates Forward (+)

40437744 .. 40440137

Gene Structure 2394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1323000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGCTCTCGCTGTTACTTCTTCTTCTTCTGCTTCGATCTCTGGTCGCACCTTCACTCCCTCCTCAGAACCCAGAGCTCCGCAATTGGGTTGCATTCGGGTGTTTGATCGATCGTACGGTCAAATTCAAAGCAATGCCGTGACGTTTTCTCAGCGGCGGAGCTCGGTGAAGCCGGTGAATGCGCAGCCGAAGCGGAGCGAGTCGATTGTGCCTTCTGCAGCGACGGTTTTTGCTCCTGAGGTGGTTGAGAAAGTAGAGGTGGAGGACTATGCCCAATTGGCTAAAGAGCTCGAGAATGCTTCCCCTCTTGAGATTATGGACAAGGCGCTTGAGAAATTCGGCAACGATATCGCCATTGCTTTCAGTGGAGCTGAGGATGTTGCTTTGATCGAGTATGCGCATTTAACCGGTAGACCCTACAGGGTTTTCAGCTTGGATACTGGGAGGCTGAACCCTGAAACATATCAATTCTTTGATACAGTCGAGAAGCACTATGGCATCCGCATTGAATACATGTTTCCAGATGCTGTTGAAGTTCAGGCATTAGTAAGGACCAAAGGGCTGTTCTCTTTTTACGAGGATGGGCACCAGGAGTGCTGCCGTGTGAGGAAGGTGAGACCCCTGAGGAGGGCCCTCAAGGGGCTGCGTGCCTGGATCACCGGACAACGGAAAGATCAATCTCCAGGGACTAGGTCTGAAATTCCTGTTGTCCAGGTTGACCCTGTTTTCGAGGGACTGGATGGCGGTGCTGGCAGCCTGGTGAAGTGGAACCCAGTGGCAAATGTTGAGGGTCATGACATATGGAACTTCCTGCGTGCCATGAATGTACCTGTGAATTCACTGCACTCTAAAGGGTACATCTCGATTGGTTGTGAGCCATGCACAAGGTCAGTCCTACCTGGGCAACATGAGAGAGAAGGAAGATGGTGGTGGGAGGATGCCAAGGCTAAGGAATGCGGTCTTCACAAGGGCAACATTAAACAGGAAGGAGGAGGCGAGAATGGCAAGGCTGCACAGTCAAATGGTGCTGCCACGGAAACTGATATATTCACTTCCCAGAATCTAGTCACCTTAAGCCGAACTGGAATAGAAAATTTGGCAAAACTTGAGGACCGGAAAGAACCATGGATTGTAGTGCTCTATGCACCGTGGTGCCAGTTCTGCCAGGCAATGGAAGCATCATACGTTGAATTGGCTGACACGTTGGCCGGGAGCGGTGTGAAAGTAGGGAAGTTCAGAGCAGATGGCGAGCAAAAGGAGTTTGCCCAGAAAGAGCTGCAGCTTGGAAGCTTCCCCACCATACTTTTCTTCCCCAAACACTCTTCTCAGCCGATCAAGTACCCAACAGAGAAAAGGGATGTTAATTCATTGTTGGCTTTCGTCAATGCCCTCCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0003674 GO:0003824 GO:0004604 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006790 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009973 GO:0009987 GO:0016491 GO:0016667 GO:0016671 GO:0019379 GO:0019419 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00920 ko01120 map00920 map01120

Pfam Domains

Protein Families

PAPS_reduct Thioredoxin

Protein Analysis

466

Amino Acids

51.61

Weight (kDa)

6.74

Isoelectric Point (pI)

50.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAPS_reduct	PF01507	117 - 296	1.1e-48	Phosphoadenosine phosphosulfate reductase domain
Thioredoxin	PF00085	368 - 462	4.9e-11	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62180 AT1G62180 AT4G04610 AT4G21990 AT4G21990
fragaria_vesca	FvH4_3g01900
malus_domestica	MD03G1198900.v1.1 MD05G1348200.v1.1 MD10G1323000.v1.1 MD11G1215200.v1.1
prunus_persica	Prupe.4G019200_v2.0.a1 Prupe.4G216100_v2.0.a1
pyrus_communis	pycom03g15040 pycom05g31570 pycom10g27340
rosa_chinensis	RchiOBHm_Chr5g0002761
rosa_laevigata	RLG00000031056
rosa_multiflora	Rmu_sc0013603.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073140
rosa_rugosa	Rorug04G0399100
rosa_samantha	Rh5AG022200 Rh5BG025100 Rh5DG023500
rosa_wichuraiana	Rw5G002070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	183, 399
AccB1I	GGYRCC	2 cut(s)	585, 1152
AccB7I	CCANNNNNTGG	1 cut(s)	1171
AccBSI	CCGCTC	1 cut(s)	1215
AccI	GTMKAC	1 cut(s)	412
AciI	CCGC	8 cut(s)	80, 154, 157, 193, 502, 744, 957, 1215
AclWI	GGATC	1 cut(s)	662
AcoI	YGGCCR	1 cut(s)	1206
AcsI	RAATTY	5 cut(s)	123, 335, 699, 835, 1093
AfaI	GTAC	4 cut(s)	116, 828, 857, 1340
AfiI	CCNNNNNNNGG	6 cut(s)	86, 627, 628, 639, 666, 1171
AflII	CTTAAG	1 cut(s)	1072
AflIII	ACRYGT	2 cut(s)	513, 1200
AgeI	ACCGGT	1 cut(s)	407
AgsI	TTSAA	4 cut(s)	128, 509, 533, 1190
AjnI	CCWGG	7 cut(s)	588, 650, 682, 711, 756, 898, 1164
AjuI	GAANNNNNNNTTGG	2 cut(s)	548, 580
AleI	CACNNNNGTG	1 cut(s)	1150
AluBI	AGCT	8 cut(s)	77, 162, 289, 371, 432, 1276, 1282, 1290
AluI	AGCT	8 cut(s)	77, 162, 289, 371, 432, 1276, 1282, 1290
Alw21I	GWGCWC	4 cut(s)	79, 164, 291, 1140
Alw26I	GTCTC	1 cut(s)	610
AlwI	GGATC	1 cut(s)	662
AlwNI	CAGNNNCTG	1 cut(s)	527
Ama87I	CYCGRG	1 cut(s)	290
AoxI	GGCC	2 cut(s)	630, 1206
ApaI	GGGCCC	1 cut(s)	634
ApeKI	GCWGC	9 cut(s)	184, 218, 597, 643, 753, 1010, 1028, 1276, 1279
ApoI	RAATTY	5 cut(s)	123, 335, 699, 835, 1093
ArsI	GACNNNNNNTTYG	2 cut(s)	710, 742
AsiGI	ACCGGT	1 cut(s)	407
AspLEI	GCGC	3 cut(s)	184, 328, 400
AspS9I	GGNCC	4 cut(s)	552, 630, 631, 1111
AsuC2I	CCSGG	1 cut(s)	1210
AsuHPI	GGTGA	6 cut(s)	178, 187, 625, 649, 772, 1060
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	2 cut(s)	552, 1111
AxyI	CCTNAGG	2 cut(s)	237, 623
BaeGI	GKGCMC	2 cut(s)	588, 634
BanI	GGYRCC	2 cut(s)	585, 1152
BanII	GRGCYC	4 cut(s)	79, 164, 291, 634
BbsI	GAAGAC	1 cut(s)	953
Bbv12I	GWGCWC	4 cut(s)	79, 164, 291, 1140
BbvCI	CCTCAGC	1 cut(s)	372
BbvI	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1263, 1291
BccI	CCATC	4 cut(s)	575, 734, 918, 1238
BceAI	ACGGC	2 cut(s)	122, 585
BcgI	CGANNNNNNTGC	2 cut(s)	331, 365
BciT130I	CCWGG	7 cut(s)	590, 652, 684, 713, 758, 900, 1166
BciVI	GTATCC	1 cut(s)	430
BcnI	CCSGG	1 cut(s)	1210
BcoDI	GTCTC	1 cut(s)	610
BfaI	CTAG	2 cut(s)	690, 1064
BfmI	CTRYAG	3 cut(s)	216, 418, 1277
BfoI	RGCGCY	1 cut(s)	329
BfrI	CTTAAG	1 cut(s)	1072
BfuI	GTATCC	1 cut(s)	430
BglI	GCCNNNNNGGC	1 cut(s)	278
Bme1390I	CCNGG	8 cut(s)	590, 652, 684, 713, 758, 900, 1166, 1210
Bme18I	GGWCC	2 cut(s)	552, 1111
BmeT110I	CYCGRG	1 cut(s)	290
BmgT120I	GGNCC	4 cut(s)	552, 630, 631, 1111
BmiI	GGNNCC	4 cut(s)	587, 632, 770, 1154
BmrFI	CCNGG	8 cut(s)	590, 652, 684, 713, 758, 900, 1166, 1210
BmrI	ACTGGG	2 cut(s)	450, 767
BmsI	GCATC	4 cut(s)	507, 514, 928, 1187
BmuI	ACTGGG	2 cut(s)	450, 767
BpiI	GAAGAC	1 cut(s)	953
BpmI	CTGGAG	1 cut(s)	666
Bpu10I	CCTNAGC	2 cut(s)	372, 948
BpuEI	CTTGAG	4 cut(s)	329, 350, 620, 1127
BpuMI	CCSGG	1 cut(s)	1210
Bsa29I	ATCGAT	1 cut(s)	109
BsaI	GGTCTC	1 cut(s)	610
BsaJI	CCNNGG	6 cut(s)	683, 899, 942, 1032, 1124, 1148
BsaWI	WCCGGW	4 cut(s)	407, 659, 1113, 1392
BsaXI	ACNNNNNCTCC	2 cut(s)	40, 70
Bsc4I	CCNNNNNNNGG	6 cut(s)	86, 627, 628, 639, 666, 1171
Bse118I	RCCGGY	2 cut(s)	172, 407
Bse1I	ACTGG	5 cut(s)	445, 741, 773, 1087, 1156
Bse21I	CCTNAGG	2 cut(s)	237, 623
Bse3DI	GCAATG	3 cut(s)	139, 354, 1176
BseBI	CCWGG	7 cut(s)	590, 652, 684, 713, 758, 900, 1166
BseCI	ATCGAT	1 cut(s)	109
BseDI	CCNNGG	6 cut(s)	683, 899, 942, 1032, 1124, 1148
BseGI	GGATG	6 cut(s)	382, 498, 586, 745, 943, 1363
BseLI	CCNNNNNNNGG	6 cut(s)	86, 627, 628, 639, 666, 1171
BseMI	GCAATG	3 cut(s)	139, 354, 1176
BseMII	CTCAG	6 cut(s)	78, 164, 228, 363, 614, 1340
BseNI	ACTGG	5 cut(s)	445, 741, 773, 1087, 1156
BseRI	GAGGAG	3 cut(s)	52, 640, 1005
BseSI	GKGCMC	2 cut(s)	588, 634
BseXI	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1263, 1291
BsgI	GTGCAG	2 cut(s)	827, 996
Bsh1285I	CGRYCG	1 cut(s)	113
BshFI	GGCC	2 cut(s)	632, 1208
BshNI	GGYRCC	2 cut(s)	585, 1152
BshTI	ACCGGT	1 cut(s)	407
BshVI	ATCGAT	1 cut(s)	109
BsiEI	CGRYCG	1 cut(s)	113
BsiHKAI	GWGCWC	4 cut(s)	79, 164, 291, 1140
BsiHKCI	CYCGRG	1 cut(s)	290
BsiSI	CCGG	6 cut(s)	173, 408, 660, 1114, 1209, 1393
BsiWI	CGTACG	1 cut(s)	114
BslFI	GGGAC	2 cut(s)	700, 747
BslI	CCNNNNNNNGG	6 cut(s)	86, 627, 628, 639, 666, 1171
BsmAI	GTCTC	1 cut(s)	610
BsmFI	GGGAC	2 cut(s)	700, 747
BsmI	GAATGC	4 cut(s)	93, 184, 301, 959
BsnI	GGCC	2 cut(s)	632, 1208
Bso31I	GGTCTC	1 cut(s)	610
BsoBI	CYCGRG	1 cut(s)	290
Bsp120I	GGGCCC	1 cut(s)	630
Bsp1286I	GDGCHC	6 cut(s)	79, 164, 291, 588, 634, 1140
Bsp143I	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
Bsp19I	CCATGG	1 cut(s)	1124
BspACI	CCGC	8 cut(s)	80, 154, 157, 193, 502, 744, 957, 1215
BspANI	GGCC	2 cut(s)	632, 1208
BspCNI	CTCAG	6 cut(s)	77, 163, 229, 364, 615, 1339
BspDI	ATCGAT	1 cut(s)	109
BspHI	TCATGA	1 cut(s)	793
BspLI	GGNNCC	4 cut(s)	587, 632, 770, 1154
BspMAI	CTGCAG	2 cut(s)	220, 1281
BspPI	GGATC	1 cut(s)	662
BspT107I	GGYRCC	2 cut(s)	585, 1152
BspTI	CTTAAG	1 cut(s)	1072
BspTNI	GGTCTC	1 cut(s)	610
BsrBI	CCGCTC	1 cut(s)	1215
BsrDI	GCAATG	3 cut(s)	139, 354, 1176
BsrFI	RCCGGY	2 cut(s)	172, 407
BsrI	ACTGG	5 cut(s)	445, 741, 773, 1087, 1156
BssAI	RCCGGY	2 cut(s)	172, 407
BssECI	CCNNGG	6 cut(s)	683, 899, 942, 1032, 1124, 1148
BssMI	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
BssT1I	CCWWGG	2 cut(s)	942, 1124
Bst2UI	CCWGG	7 cut(s)	590, 652, 684, 713, 758, 900, 1166
Bst4CI	ACNGT	5 cut(s)	119, 226, 481, 1017, 1149
Bst6I	CTCTTC	1 cut(s)	1327
BstAFI	CTTAAG	1 cut(s)	1072
BstC8I	GCNNGC	4 cut(s)	648, 751, 816, 1250
BstDEI	CTNAG	7 cut(s)	64, 150, 237, 372, 623, 948, 1326
BstDSI	CCRYGG	3 cut(s)	1032, 1124, 1148
BstF5I	GGATG	6 cut(s)	382, 498, 586, 745, 943, 1363
BstH2I	RGCGCY	1 cut(s)	329
BstHHI	GCGC	3 cut(s)	184, 328, 400
BstKTI	GATC	7 cut(s)	39, 109, 113, 390, 657, 676, 1335
BstMAI	GTCTC	1 cut(s)	610
BstMBI	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
BstMCI	CGRYCG	1 cut(s)	113
BstMWI	GCNNNNNNNGC	6 cut(s)	190, 278, 750, 1002, 1161, 1175
BstNI	CCWGG	7 cut(s)	590, 652, 684, 713, 758, 900, 1166
BstNSI	RCATGY	1 cut(s)	517
BstSCI	CCNGG	8 cut(s)	588, 650, 682, 711, 756, 898, 1164, 1208
BstSFI	CTRYAG	3 cut(s)	216, 418, 1277
BstSLI	GKGCMC	2 cut(s)	588, 634
BstV1I	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1263, 1291
BstV2I	GAAGAC	1 cut(s)	953
Bsu15I	ATCGAT	1 cut(s)	109
Bsu36I	CCTNAGG	2 cut(s)	237, 623
BsuI	GTATCC	1 cut(s)	430
BsuRI	GGCC	2 cut(s)	632, 1208
BsuTUI	ATCGAT	1 cut(s)	109
BtgI	CCRYGG	3 cut(s)	1032, 1124, 1148
BtsCI	GGATG	6 cut(s)	382, 498, 586, 745, 943, 1363
BtsI	GCAGTG	1 cut(s)	839
BtsIMutI	CAGTG	3 cut(s)	370, 780, 839
Cac8I	GCNNGC	4 cut(s)	648, 751, 816, 1250
CaiI	CAGNNNCTG	1 cut(s)	527
CciI	TCATGA	1 cut(s)	793
CfoI	GCGC	3 cut(s)	184, 328, 400
Cfr10I	RCCGGY	2 cut(s)	172, 407
Cfr13I	GGNCC	4 cut(s)	552, 630, 631, 1111
ClaI	ATCGAT	1 cut(s)	109
Csp6I	GTAC	4 cut(s)	115, 827, 856, 1339
CspAI	ACCGGT	1 cut(s)	407
CviAII	CATG	6 cut(s)	514, 794, 820, 879, 908, 1125
CviQI	GTAC	4 cut(s)	115, 827, 856, 1339
DdeI	CTNAG	7 cut(s)	64, 150, 237, 372, 623, 948, 1326
DpnI	GATC	7 cut(s)	38, 108, 112, 389, 656, 675, 1334
DpnII	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
EaeI	YGGCCR	1 cut(s)	1206
Eam1104I	CTCTTC	1 cut(s)	1327
EarI	CTCTTC	1 cut(s)	1327
EciI	GGCGGA	1 cut(s)	172
Ecl136II	GAGCTC	3 cut(s)	77, 162, 289
Eco130I	CCWWGG	2 cut(s)	942, 1124
Eco24I	GRGCYC	4 cut(s)	79, 164, 291, 634
Eco31I	GGTCTC	1 cut(s)	610
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	2 cut(s)	552, 1111
Eco53kI	GAGCTC	3 cut(s)	77, 162, 289
Eco81I	CCTNAGG	2 cut(s)	237, 623
Eco88I	CYCGRG	1 cut(s)	290
EcoICRI	GAGCTC	3 cut(s)	77, 162, 289
EcoO109I	RGGNCCY	2 cut(s)	630, 631
EcoRI	GAATTC	1 cut(s)	835
EcoRII	CCWGG	7 cut(s)	588, 650, 682, 711, 756, 898, 1164
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	2 cut(s)	942, 1124
EcoT38I	GRGCYC	4 cut(s)	79, 164, 291, 634
ErhI	CCWWGG	2 cut(s)	942, 1124
FaeI	CATG	6 cut(s)	517, 797, 823, 882, 911, 1128
FaqI	GGGAC	2 cut(s)	700, 747
FatI	CATG	6 cut(s)	513, 793, 819, 878, 907, 1124
FauNDI	CATATG	1 cut(s)	800
FblI	GTMKAC	1 cut(s)	412
FokI	GGATG	6 cut(s)	389, 485, 593, 752, 950, 1370
FriOI	GRGCYC	4 cut(s)	79, 164, 291, 634
FspAI	RTGCGCAY	1 cut(s)	399
FspBI	CTAG	2 cut(s)	690, 1064
FspI	TGCGCA	2 cut(s)	183, 399
GlaI	GCGC	3 cut(s)	183, 327, 399
GsuI	CTGGAG	1 cut(s)	666
HaeII	RGCGCY	1 cut(s)	329
HaeIII	GGCC	2 cut(s)	632, 1208
HapII	CCGG	6 cut(s)	173, 408, 660, 1114, 1209, 1393
HhaI	GCGC	3 cut(s)	184, 328, 400
Hin1II	CATG	6 cut(s)	517, 797, 823, 882, 911, 1128
Hin6I	GCGC	3 cut(s)	182, 326, 398
HinP1I	GCGC	3 cut(s)	182, 326, 398
HincII	GTYRAC	1 cut(s)	718
HindII	GTYRAC	1 cut(s)	718
HindIII	AAGCTT	1 cut(s)	1288
HinfI	GANTC	2 cut(s)	200, 1060
HpaII	CCGG	6 cut(s)	173, 408, 660, 1114, 1209, 1393
HphI	GGTGA	6 cut(s)	178, 187, 625, 649, 772, 1060
Hpy166II	GTNNAC	2 cut(s)	413, 718
Hpy188I	TCNGA	3 cut(s)	67, 697, 1238
Hpy188III	TCNNGA	7 cut(s)	236, 292, 308, 484, 521, 794, 862
Hpy8I	GTNNAC	2 cut(s)	413, 718
Hpy99I	CGWCG	1 cut(s)	226
HpyAV	CCTTC	5 cut(s)	61, 222, 604, 911, 980
HpyCH4III	ACNGT	5 cut(s)	119, 226, 481, 1017, 1149
HpyCH4IV	ACGT	3 cut(s)	143, 1185, 1202
HpyCH4V	TGCA	7 cut(s)	93, 218, 844, 882, 1013, 1145, 1279
HpyF10VI	GCNNNNNNNGC	6 cut(s)	190, 278, 750, 1002, 1161, 1175
HpyF3I	CTNAG	7 cut(s)	64, 150, 237, 372, 623, 948, 1326
HpySE526I	ACGT	3 cut(s)	143, 1185, 1202
Hsp92II	CATG	6 cut(s)	517, 797, 823, 882, 911, 1128
HspAI	GCGC	3 cut(s)	182, 326, 398
Kzo9I	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
LmnI	GCTCC	6 cut(s)	82, 159, 195, 238, 368, 1212
Lsp1109I	GCAGC	9 cut(s)	196, 230, 584, 630, 765, 997, 1015, 1263, 1291
LweI	GCATC	4 cut(s)	507, 514, 928, 1187
MaeI	CTAG	2 cut(s)	690, 1064
MaeII	ACGT	3 cut(s)	143, 1185, 1202
MaeIII	GTNAC	3 cut(s)	13, 139, 1066
MalI	GATC	7 cut(s)	38, 108, 112, 389, 656, 675, 1334
MbiI	CCGCTC	1 cut(s)	1215
MboI	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
MboII	GAAGA	7 cut(s)	12, 15, 18, 933, 953, 1300, 1314
MfeI	CAATTG	2 cut(s)	83, 275
MhlI	GDGCHC	6 cut(s)	79, 164, 291, 588, 634, 1140
MlyI	GAGTC	1 cut(s)	209
MseI	TTAA	4 cut(s)	404, 978, 1073, 1362
MslI	CAYNNNNRTG	2 cut(s)	98, 1150
MspA1I	CMGCKG	1 cut(s)	154
MspCI	CTTAAG	1 cut(s)	1072
MspI	CCGG	6 cut(s)	173, 408, 660, 1114, 1209, 1393
MspR9I	CCNGG	8 cut(s)	590, 652, 684, 713, 758, 900, 1166, 1210
MunI	CAATTG	2 cut(s)	83, 275
Mva1269I	GAATGC	4 cut(s)	93, 184, 301, 959
MvaI	CCWGG	7 cut(s)	590, 652, 684, 713, 758, 900, 1166
MwoI	GCNNNNNNNGC	6 cut(s)	190, 278, 750, 1002, 1161, 1175
NciI	CCSGG	1 cut(s)	1210
NcoI	CCATGG	1 cut(s)	1124
NdeI	CATATG	1 cut(s)	800
NdeII	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
NlaIII	CATG	6 cut(s)	517, 797, 823, 882, 911, 1128
NlaIV	GGNNCC	4 cut(s)	587, 632, 770, 1154
NmuCI	GTSAC	2 cut(s)	139, 1066
NsbI	TGCGCA	2 cut(s)	183, 399
NspI	RCATGY	1 cut(s)	517
OliI	CACNNNNGTG	1 cut(s)	1150
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	1 cut(s)	793
PciI	ACATGT	1 cut(s)	513
PctI	GAATGC	4 cut(s)	93, 184, 301, 959
PfeI	GAWTC	1 cut(s)	1060
Pfl23II	CGTACG	1 cut(s)	114
PflFI	GACNNNGTC	1 cut(s)	691
PflMI	CCANNNNNTGG	1 cut(s)	1171
PinAI	ACCGGT	1 cut(s)	407
Ple19I	CGATCG	1 cut(s)	113
PleI	GAGTC	1 cut(s)	208
PpsI	GAGTC	1 cut(s)	208
PscI	ACATGT	1 cut(s)	513
Psp124BI	GAGCTC	3 cut(s)	79, 164, 291
Psp6I	CCWGG	7 cut(s)	588, 650, 682, 711, 756, 898, 1164
PspGI	CCWGG	7 cut(s)	588, 650, 682, 711, 756, 898, 1164
PspLI	CGTACG	1 cut(s)	114
PspN4I	GGNNCC	4 cut(s)	587, 632, 770, 1154
PspOMI	GGGCCC	1 cut(s)	630
PspPI	GGNCC	4 cut(s)	552, 630, 631, 1111
PstI	CTGCAG	2 cut(s)	220, 1281
PstNI	CAGNNNCTG	1 cut(s)	527
PsyI	GACNNNGTC	1 cut(s)	691
PvuI	CGATCG	1 cut(s)	113
RsaI	GTAC	4 cut(s)	116, 828, 857, 1340
RsaNI	GTAC	4 cut(s)	115, 827, 856, 1339
RseI	CAYNNNNRTG	2 cut(s)	98, 1150
SacI	GAGCTC	3 cut(s)	79, 164, 291
SaqAI	TTAA	4 cut(s)	404, 978, 1073, 1362
Sau3AI	GATC	7 cut(s)	36, 106, 110, 387, 654, 673, 1332
Sau96I	GGNCC	4 cut(s)	552, 630, 631, 1111
SchI	GAGTC	1 cut(s)	209
ScrFI	CCNGG	8 cut(s)	590, 652, 684, 713, 758, 900, 1166, 1210
SduI	GDGCHC	6 cut(s)	79, 164, 291, 588, 634, 1140
SfaNI	GCATC	4 cut(s)	507, 514, 928, 1187
SfcI	CTRYAG	3 cut(s)	216, 418, 1277
Sfr274I	CTCGAG	1 cut(s)	290
SinI	GGWCC	2 cut(s)	552, 1111
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	2 cut(s)	98, 1150
SmlI	CTYRAG	6 cut(s)	290, 308, 329, 635, 1072, 1106
SmoI	CTYRAG	6 cut(s)	290, 308, 329, 635, 1072, 1106
SsiI	CCGC	8 cut(s)	80, 154, 157, 193, 502, 744, 957, 1215
SspMI	CTAG	2 cut(s)	690, 1064
SstI	GAGCTC	3 cut(s)	79, 164, 291
StyD4I	CCNGG	8 cut(s)	588, 650, 682, 711, 756, 898, 1164, 1208
StyI	CCWWGG	2 cut(s)	942, 1124
TaaI	ACNGT	5 cut(s)	119, 226, 481, 1017, 1149
TaiI	ACGT	3 cut(s)	146, 1188, 1205
TaqI	TCGA	8 cut(s)	35, 109, 203, 291, 390, 483, 729, 863
TauI	GCSGC	1 cut(s)	157
TfiI	GAWTC	1 cut(s)	1060
Tru1I	TTAA	4 cut(s)	404, 978, 1073, 1362
Tru9I	TTAA	4 cut(s)	404, 978, 1073, 1362
TscAI	CASTG	3 cut(s)	370, 780, 846
TseFI	GTSAC	2 cut(s)	139, 1066
TseI	GCWGC	9 cut(s)	184, 218, 597, 643, 753, 1010, 1028, 1276, 1279
Tsp45I	GTSAC	2 cut(s)	139, 1066
TspDTI	ATGAA	2 cut(s)	836, 1356
TspGWI	ACGGA	2 cut(s)	682, 1049
TspRI	CASTG	3 cut(s)	370, 780, 846
Tth111I	GACNNNGTC	1 cut(s)	691
Van91I	CCANNNNNTGG	1 cut(s)	1171
Vha464I	CTTAAG	1 cut(s)	1072
VpaK11BI	GGWCC	2 cut(s)	552, 1111
XapI	RAATTY	5 cut(s)	123, 335, 699, 835, 1093
XceI	RCATGY	1 cut(s)	517
XhoI	CTCGAG	1 cut(s)	290
XmiI	GTMKAC	1 cut(s)	412
XspI	CTAG	2 cut(s)	690, 1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.