Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004000

Physical Location & Seq

Genomic Coordinates Reverse (-)

25193704 .. 25197158

Gene Structure 3455 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G67300.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGTTGGGATTGCAACGAGAAACATCCTCGATGTATAAGAGAACGTCATCGAGAGATTATTCTCCGATGATCGACGTCGAAGACAGCTCAGGTCTTTTAGAGAATGATGTGGACAATGAAATGGAAACTACAAATCCTTCATGGAAGTGTTCTCTTCCGCATGTTCTAGTGGCTACAATTTCGTCGTTTCTATTTGGTTACCATTTAGGAGTTGTTAATGAACCTCTTGAAAGCATTTCGTCTGATCTTGGTTTTAGTGGTGATACATTAGCTGAAGGTTTGGTGGTTAGTGTATGTCTTGGTGGTGCATTTCTCGGATCTTTATTCAGTGGGGGAGTTGCTGATGGGTTTGGAAGACGGAGAGCTTTTCAGATTTGTGCTTTGCCTATGATTTTGGGTGCTTTTGTGAGTGGAGTTAGCAACAGCTTAGCTGTAATGCTTTTGGGAAGATTCTTGGTTGGGACTGGCATGGGTCTTGGACCACCTGTGGCAGCACTCTATGTGACAGAGGTATCACCAGCTTTTGTTAGGGGAACATATGGAAGCTTCATACAGATAGCTACATGTCTGGGACTGATGGCAGCTCTGTTTATAGGGATCCCAGTCCATAACATCACGGGTTGGTGGCGTGTCTGTTTCTGGCTTTCAACGATACCTGCTGCACTACTCGCTCTGGGAATGTTCCTCTGTGCTGAGTCTCCACAGTGGCTATTCAAGCAAGGGAAGATAGCTGAAGCAGAAGCTGAGTTTGAGAGGCTGCTTGGAGGGTCTCATGTGAAAACAGCAATGGCAGAATTATACAAACTAGATCTAGACAAGACGGATGAACCAGATGTTGTGAGCCTCTCTGAGCTGTTATATGGTCGGCATTCAAGAGTTGTTTTTATTGGATCAACCCTGTTTGCTTTGCAACAGCTATCTGGTATAAATGCTGTTTTTTATTTCTCTTCTACCGTATTCAAAAGTGCTGGAGTACCATCGGACCTAGGCAACATATTTGTTGGAGTTTCAAACCTCTTGGGATCTGTAATCGCGATGGTGTTGATGGATAAAGTAGGAAGAAAGCTTCTTCTGCTTTGGAGTTTTATTGGCATGGCAGCAGCAATGGCACTTCAAGTTGGTGCTACAAGTTCATACTTACCACATTTTTCGGCGTTGTGTTTGTCTGTCGGTGGCACTCTTGTGTTTGTGCTAACATTCGCCTTAGGAGCTGGTCCAGTACCAGGTTTACTCCTCCCTGAGATCTTCCCAAGTCGAATCAGAGCAAAAGCGATGGCTTTCTGCATGTCTGTGCATTGGGTGATAAATTTCTTTGTGGGTTTACTCTTTCTGAGATTGCTTGAGAAGCTTGGTCCTCGGCTACTATATTCGATGTTTTCTACGTTCTGTTTAATGGCGGTGATGTTCGTGAAGCGGAACGTGATTGAAACCAAAGGAAAAACACTTCAAGAGATTGAGATTTCTCTACTAGCCAAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0012505 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

493

Amino Acids

53.13

Weight (kDa)

6.4

Isoelectric Point (pI)

40.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	55 - 435	4.2e-83	Sugar (and other) transporter
MFS_1	PF07690	60 - 428	6e-22	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004000)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67300 AT1G67300 AT1G67300 AT1G67300 AT1G67300 AT1G67300 AT1G67300
fragaria_vesca	FvH4_1g04310 FvH4_1g04310 FvH4_1g04310 FvH4_1g04310 FvH4_1g04310
malus_domestica	MD02G1042800.v1.1 MD15G1181400.v1.1
prunus_persica	Prupe.7G234100_v2.0.a1
pyrus_communis	pycom02g03560 pycom15g16380
rosa_chinensis	RchiOBHm_Chr2g0089961
rosa_laevigata	RLG00000016064
rosa_multiflora	Rmu_sc0002384.1_g000011 Rmu_sc0005594.1_g000018
rosa_roxburghii	Rroxscaffold_2G00151510
rosa_rugosa	Rorug02G0003800 Rorug02G0003900 Rorug02G0004000
rosa_samantha	Rh1AG411000 Rh1AG411600 Rh1AG411800 Rh2AG049200 Rh2BG048100 Rh2CG050200 Rh2DG049300
rosa_wichuraiana	Rw2G004100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	78
Acc36I	ACCTGC	1 cut(s)	664
AccII	CGCG	1 cut(s)	1034
AciI	CCGC	3 cut(s)	158, 1397, 1414
AclWI	GGATC	5 cut(s)	325, 592, 605, 898, 1030
AcsI	RAATTY	1 cut(s)	1306
AcuI	CTGAAG	2 cut(s)	294, 753
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	2 cut(s)	975, 1221
AfiI	CCNNNNNNNGG	1 cut(s)	1223
AflIII	ACRYGT	1 cut(s)	563
AgsI	TTSAA	9 cut(s)	230, 648, 715, 873, 961, 1011, 1115, 1427, 1448
AjnI	CCWGG	1 cut(s)	1222
AleI	CACNNNNGTG	1 cut(s)	1181
Alw26I	GTCTC	2 cut(s)	702, 774
AlwI	GGATC	5 cut(s)	325, 592, 605, 898, 1030
AlwNI	CAGNNNCTG	1 cut(s)	743
ApeKI	GCWGC	6 cut(s)	491, 581, 659, 757, 1097, 1100
ApoI	RAATTY	1 cut(s)	1306
AspA2I	CCTAGG	1 cut(s)	985
AspS9I	GGNCC	4 cut(s)	479, 982, 1214, 1352
AsuHPI	GGTGA	4 cut(s)	272, 507, 1312, 1411
AvaII	GGWCC	4 cut(s)	479, 982, 1214, 1352
AvrII	CCTAGG	1 cut(s)	985
AxyI	CCTNAGG	1 cut(s)	1204
BaeI	ACNNNNGTAYC	2 cut(s)	495, 528
BamHI	GGATCC	1 cut(s)	597
BbsI	GAAGAC	2 cut(s)	87, 361
BbvI	GCAGC	6 cut(s)	503, 593, 646, 744, 1109, 1112
BccI	CCATC	6 cut(s)	338, 571, 985, 1030, 1039, 1267
BciT130I	CCWGG	1 cut(s)	1224
BcoDI	GTCTC	2 cut(s)	702, 774
BfaI	CTAG	5 cut(s)	167, 806, 812, 986, 1469
BfuAI	ACCTGC	1 cut(s)	664
BglII	AGATCT	2 cut(s)	808, 1242
BisI	GCNGC	6 cut(s)	492, 582, 660, 758, 1098, 1101
BlnI	CCTAGG	1 cut(s)	985
BlpI	GCTNAGC	1 cut(s)	427
BlsI	GCNGC	6 cut(s)	493, 583, 661, 759, 1099, 1102
Bme1390I	CCNGG	1 cut(s)	1224
Bme18I	GGWCC	4 cut(s)	479, 982, 1214, 1352
BmgT120I	GGNCC	4 cut(s)	479, 982, 1214, 1352
BmiI	GGNNCC	1 cut(s)	599
BmrFI	CCNGG	1 cut(s)	1224
BmrI	ACTGGG	1 cut(s)	596
BmuI	ACTGGG	1 cut(s)	596
BpiI	GAAGAC	2 cut(s)	87, 361
BpmI	CTGGAG	1 cut(s)	990
Bpu10I	CCTNAGC	1 cut(s)	88
Bpu1102I	GCTNAGC	1 cut(s)	427
BpuEI	CTTGAG	1 cut(s)	1361
BsaHI	GRCGYC	1 cut(s)	75
BsaI	GGTCTC	1 cut(s)	774
BsaJI	CCNNGG	2 cut(s)	985, 1355
Bsc4I	CCNNNNNNNGG	1 cut(s)	1223
Bse1I	ACTGG	3 cut(s)	469, 602, 1217
Bse21I	CCTNAGG	1 cut(s)	1204
Bse3DI	GCAATG	2 cut(s)	792, 1110
BseBI	CCWGG	1 cut(s)	1224
BseDI	CCNNGG	2 cut(s)	985, 1355
BseGI	GGATG	2 cut(s)	23, 829
BseLI	CCNNNNNNNGG	1 cut(s)	1223
BseMI	GCAATG	2 cut(s)	792, 1110
BseMII	CTCAG	6 cut(s)	102, 684, 735, 840, 1230, 1322
BseNI	ACTGG	3 cut(s)	469, 602, 1217
BseRI	GAGGAG	1 cut(s)	1223
BseXI	GCAGC	6 cut(s)	503, 593, 646, 744, 1109, 1112
BsgI	GTGCAG	1 cut(s)	645
Bsh1236I	CGCG	1 cut(s)	1034
BslFI	GGGAC	2 cut(s)	475, 585
BslI	CCNNNNNNNGG	1 cut(s)	1223
BsmAI	GTCTC	2 cut(s)	702, 774
BsmFI	GGGAC	2 cut(s)	475, 585
BsmI	GAATGC	1 cut(s)	868
Bso31I	GGTCTC	1 cut(s)	774
Bsp143I	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
Bsp1720I	GCTNAGC	1 cut(s)	427
Bsp68I	TCGCGA	1 cut(s)	1034
BspACI	CCGC	3 cut(s)	158, 1397, 1414
BspCNI	CTCAG	6 cut(s)	101, 685, 736, 841, 1231, 1323
BspFNI	CGCG	1 cut(s)	1034
BspLI	GGNNCC	1 cut(s)	599
BspMI	ACCTGC	1 cut(s)	664
BspPI	GGATC	5 cut(s)	325, 592, 605, 898, 1030
BspTNI	GGTCTC	1 cut(s)	774
BsrDI	GCAATG	2 cut(s)	792, 1110
BsrI	ACTGG	3 cut(s)	469, 602, 1217
BssECI	CCNNGG	2 cut(s)	985, 1355
BssMI	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
BssNI	GRCGYC	1 cut(s)	75
BssT1I	CCWWGG	1 cut(s)	985
Bst2UI	CCWGG	1 cut(s)	1224
Bst4CI	ACNGT	2 cut(s)	705, 955
Bst6I	CTCTTC	2 cut(s)	159, 952
BstACI	GRCGYC	1 cut(s)	75
BstDEI	CTNAG	8 cut(s)	88, 427, 693, 744, 849, 1204, 1239, 1331
BstEII	GGTNACC	1 cut(s)	197
BstF5I	GGATG	2 cut(s)	23, 829
BstFNI	CGCG	1 cut(s)	1034
BstKTI	GATC	8 cut(s)	72, 247, 320, 600, 811, 893, 1025, 1245
BstMAI	GTCTC	2 cut(s)	702, 774
BstMBI	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
BstMWI	GCNNNNNNNGC	6 cut(s)	668, 715, 1072, 1106, 1208, 1345
BstNI	CCWGG	1 cut(s)	1224
BstNSI	RCATGY	3 cut(s)	164, 567, 1288
BstPI	GGTNACC	1 cut(s)	197
BstSCI	CCNGG	1 cut(s)	1222
BstUI	CGCG	1 cut(s)	1034
BstV1I	GCAGC	6 cut(s)	503, 593, 646, 744, 1109, 1112
BstV2I	GAAGAC	2 cut(s)	87, 361
BstX2I	RGATCY	5 cut(s)	317, 597, 808, 1022, 1242
BstYI	RGATCY	5 cut(s)	317, 597, 808, 1022, 1242
Bsu36I	CCTNAGG	1 cut(s)	1204
BtgZI	GCGATG	2 cut(s)	1049, 1286
BtsCI	GGATG	2 cut(s)	23, 829
BtsIMutI	CAGTG	2 cut(s)	334, 710
BtuMI	TCGCGA	1 cut(s)	1034
BveI	ACCTGC	1 cut(s)	664
CaiI	CAGNNNCTG	1 cut(s)	743
Cfr13I	GGNCC	4 cut(s)	479, 982, 1214, 1352
CsiI	ACCWGGT	1 cut(s)	1222
Csp6I	GTAC	2 cut(s)	974, 1220
CviAII	CATG	8 cut(s)	141, 161, 469, 564, 773, 1093, 1285, 1479
CviQI	GTAC	2 cut(s)	974, 1220
DdeI	CTNAG	8 cut(s)	88, 427, 693, 744, 849, 1204, 1239, 1331
DpnI	GATC	8 cut(s)	71, 246, 319, 599, 810, 892, 1024, 1244
DpnII	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
Eam1104I	CTCTTC	2 cut(s)	159, 952
EarI	CTCTTC	2 cut(s)	159, 952
Eco130I	CCWWGG	1 cut(s)	985
Eco31I	GGTCTC	1 cut(s)	774
Eco47I	GGWCC	4 cut(s)	479, 982, 1214, 1352
Eco57I	CTGAAG	2 cut(s)	294, 753
Eco81I	CCTNAGG	1 cut(s)	1204
Eco91I	GGTNACC	1 cut(s)	197
EcoO65I	GGTNACC	1 cut(s)	197
EcoRII	CCWGG	1 cut(s)	1222
EcoT14I	CCWWGG	1 cut(s)	985
ErhI	CCWWGG	1 cut(s)	985
FaeI	CATG	8 cut(s)	144, 164, 472, 567, 776, 1096, 1288, 1482
FaqI	GGGAC	2 cut(s)	475, 585
FatI	CATG	8 cut(s)	140, 160, 468, 563, 772, 1092, 1284, 1478
FauNDI	CATATG	1 cut(s)	538
Fnu4HI	GCNGC	6 cut(s)	492, 582, 660, 758, 1098, 1101
FokI	GGATG	2 cut(s)	10, 836
Fsp4HI	GCNGC	6 cut(s)	492, 582, 660, 758, 1098, 1101
FspBI	CTAG	5 cut(s)	167, 806, 812, 986, 1469
GluI	GCNGC	6 cut(s)	492, 582, 660, 758, 1098, 1101
GsuI	CTGGAG	1 cut(s)	990
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	8 cut(s)	144, 164, 472, 567, 776, 1096, 1288, 1482
HindIII	AAGCTT	3 cut(s)	544, 1064, 1346
HinfI	GANTC	3 cut(s)	450, 695, 1257
HphI	GGTGA	4 cut(s)	272, 507, 1312, 1411
Hpy166II	GTNNAC	3 cut(s)	112, 1229, 1322
Hpy188I	TCNGA	8 cut(s)	66, 244, 317, 372, 850, 982, 1262, 1332
Hpy188III	TCNNGA	7 cut(s)	51, 227, 812, 873, 1033, 1408, 1448
Hpy8I	GTNNAC	3 cut(s)	112, 1229, 1322
Hpy99I	CGWCG	3 cut(s)	77, 80, 187
HpyAV	CCTTC	2 cut(s)	147, 269
HpyCH4III	ACNGT	2 cut(s)	705, 955
HpyCH4IV	ACGT	4 cut(s)	44, 75, 1382, 1419
HpyCH4V	TGCA	6 cut(s)	13, 308, 662, 910, 1284, 1294
HpyF10VI	GCNNNNNNNGC	6 cut(s)	668, 715, 1072, 1106, 1208, 1345
HpyF3I	CTNAG	8 cut(s)	88, 427, 693, 744, 849, 1204, 1239, 1331
HpySE526I	ACGT	4 cut(s)	44, 75, 1382, 1419
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	8 cut(s)	144, 164, 472, 567, 776, 1096, 1288, 1482
Kzo9I	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
LmnI	GCTCC	1 cut(s)	1208
Lsp1109I	GCAGC	6 cut(s)	503, 593, 646, 744, 1109, 1112
MabI	ACCWGGT	1 cut(s)	1222
MaeI	CTAG	5 cut(s)	167, 806, 812, 986, 1469
MaeII	ACGT	4 cut(s)	44, 75, 1382, 1419
MaeIII	GTNAC	2 cut(s)	197, 502
MalI	GATC	8 cut(s)	71, 246, 319, 599, 810, 892, 1024, 1244
MboI	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
MboII	GAAGA	9 cut(s)	92, 146, 366, 459, 736, 939, 1061, 1071, 1237
MflI	RGATCY	5 cut(s)	317, 597, 808, 1022, 1242
MluCI	AATT	3 cut(s)	177, 794, 1306
MlyI	GAGTC	1 cut(s)	704
MmeI	TCCRAC	1 cut(s)	982
MseI	TTAA	2 cut(s)	216, 1391
MslI	CAYNNNNRTG	3 cut(s)	145, 1181, 1289
MspR9I	CCNGG	1 cut(s)	1224
Mva1269I	GAATGC	1 cut(s)	868
MvaI	CCWGG	1 cut(s)	1224
MvnI	CGCG	1 cut(s)	1034
MwoI	GCNNNNNNNGC	6 cut(s)	668, 715, 1072, 1106, 1208, 1345
NdeI	CATATG	1 cut(s)	538
NdeII	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
NlaIII	CATG	8 cut(s)	144, 164, 472, 567, 776, 1096, 1288, 1482
NlaIV	GGNNCC	1 cut(s)	599
NmeAIII	GCCGAG	1 cut(s)	1336
NmuCI	GTSAC	1 cut(s)	502
NruI	TCGCGA	1 cut(s)	1034
NspI	RCATGY	3 cut(s)	164, 567, 1288
OliI	CACNNNNGTG	1 cut(s)	1181
PciI	ACATGT	1 cut(s)	563
PctI	GAATGC	1 cut(s)	868
PfeI	GAWTC	2 cut(s)	450, 1257
PkrI	GCNGC	6 cut(s)	493, 583, 661, 759, 1099, 1102
PleI	GAGTC	1 cut(s)	703
PpsI	GAGTC	1 cut(s)	703
PscI	ACATGT	1 cut(s)	563
Psp6I	CCWGG	1 cut(s)	1222
PspEI	GGTNACC	1 cut(s)	197
PspGI	CCWGG	1 cut(s)	1222
PspN4I	GGNNCC	1 cut(s)	599
PspPI	GGNCC	4 cut(s)	479, 982, 1214, 1352
PstNI	CAGNNNCTG	1 cut(s)	743
PsuI	RGATCY	5 cut(s)	317, 597, 808, 1022, 1242
RruI	TCGCGA	1 cut(s)	1034
RsaI	GTAC	2 cut(s)	975, 1221
RsaNI	GTAC	2 cut(s)	974, 1220
RseI	CAYNNNNRTG	3 cut(s)	145, 1181, 1289
SaqAI	TTAA	2 cut(s)	216, 1391
SatI	GCNGC	6 cut(s)	492, 582, 660, 758, 1098, 1101
Sau3AI	GATC	8 cut(s)	69, 244, 317, 597, 808, 890, 1022, 1242
Sau96I	GGNCC	4 cut(s)	479, 982, 1214, 1352
SchI	GAGTC	1 cut(s)	704
ScrFI	CCNGG	1 cut(s)	1224
SexAI	ACCWGGT	1 cut(s)	1222
SinI	GGWCC	4 cut(s)	479, 982, 1214, 1352
SmiMI	CAYNNNNRTG	3 cut(s)	145, 1181, 1289
SmlI	CTYRAG	1 cut(s)	1340
SmoI	CTYRAG	1 cut(s)	1340
Sse9I	AATT	3 cut(s)	177, 794, 1306
SsiI	CCGC	3 cut(s)	158, 1397, 1414
SspMI	CTAG	5 cut(s)	167, 806, 812, 986, 1469
StyD4I	CCNGG	1 cut(s)	1222
StyI	CCWWGG	1 cut(s)	985
TaaI	ACNGT	2 cut(s)	705, 955
TaiI	ACGT	4 cut(s)	47, 78, 1385, 1422
TaqI	TCGA	6 cut(s)	29, 50, 72, 78, 1255, 1370
TasI	AATT	3 cut(s)	177, 794, 1306
TfiI	GAWTC	2 cut(s)	450, 1257
Tru1I	TTAA	2 cut(s)	216, 1391
Tru9I	TTAA	2 cut(s)	216, 1391
TscAI	CASTG	2 cut(s)	334, 710
TseFI	GTSAC	1 cut(s)	502
TseI	GCWGC	6 cut(s)	491, 581, 659, 757, 1097, 1100
Tsp45I	GTSAC	1 cut(s)	502
TspDTI	ATGAA	6 cut(s)	129, 132, 234, 538, 840, 1122
TspGWI	ACGGA	2 cut(s)	373, 836
TspRI	CASTG	2 cut(s)	334, 710
VpaK11BI	GGWCC	4 cut(s)	479, 982, 1214, 1352
XapI	RAATTY	1 cut(s)	1306
XbaI	TCTAGA	1 cut(s)	811
XceI	RCATGY	3 cut(s)	164, 567, 1288
XmaJI	CCTAGG	1 cut(s)	985
XspI	CTAG	5 cut(s)	167, 806, 812, 986, 1469
ZraI	GACGTC	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.