Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004000

Physical Location & Seq

Genomic Coordinates Forward (+)

448633 .. 454771

Gene Structure 6139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0004000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGCTTCGAGAGCGATTTTCAGGAGGAGCAGATTGGTCAGGGACTATGTGACTGCATCCTCCCGCACAATCCAGTGGCTCGGGCATTGCCACGGTGGCTTGAATTCCTCTTTCAGCACCGGCGTCAATGATGACGATAGATTTTCGATTTCCAAAGAGGAATTCCGGCGGCCACCTCCGATGGGTGTCAGATGGATCGCTCAGTCCGTTCGTACTGTCACCACCGCCACCGCACCGGCCAAACCGCCCCCGGACGATGAGGATAACGAAGGCCGGGTCTGCGACAAAAGAAAGCAAGCTTCGCCGGAGGATTGCGATCAAGCTGTGCAAGGCCTCAGCACCACTGCCAAAGCCGCCAAGGCCAAGAAGCTGCAGGAGTCTCAGAAGGTTTCCAAAATGTTGAAGAAAGTGTGGGCCACTTTTTTGGGGATCGGTCCCGCTTTGAGAGCTGTGGCTTCCATGAGCAGGGAGGACTGGGCCAATAAGCTTGCTCATTGGAAAAAGGAGATTGTGTCAACATTGCAGCATTACTGGTTGGGTTTTAAGCTACTCGGCACTGATGTGAGGATCTGTTCGAGATTGCTGCTCAAGCTTGCTGGTGGCAAGACTCTCTCCAGAAGGGAGAGGCAGCAGCTGACGCGTACAACAGCTGATATCTTTAGGCTAGTTCCATTTGCAGTGTTTATCATTGTTCCATTCATGGAATTCTTGCTGCCGGTATTCCTCAAGTTGTTTCCCAACATGTTGCCTTCAACCTTTCAAGACAAATTGAAAGAAGAGGAAGCAATGAAAAGGAAGCTAAAGGCAAGAATAGAGTATGCTAAGTTCCTTCAAGACACAGCCAAAGAAATGGCAAAGGAAGTTCAAAACTCAAGGAGCGGAGAAATCAAACAAACAGCAGAAGATCTTGATGGGTTTTTAAGCCGGCTGAGGACCGGTGCAGGGGTCTCTAATGAGGAGATTTTGGGGTTTGCCAAGTTGTTTAATGATGAACTTACCCTTGATAACATCAGCAGGCCCCGTTTAGTCAATATGTGCAAATATATGGGTATAAGCCCTTATGGTACAGATGCATATTTGAGATATATGCTCCGGCAAAGACTCAGGCGGATTAAAGCTGATGATAAGTTAATTCAAGCGGAGGGTGTTGAGTCACTTTCAGAAGACGAGCTTCGTGAGGATTGCAGGGAGCGGGGTATGCTTGGATTGCGTTCTGTGGAAGAAATGCGTCAGCAGCTTCGTGATTGGTTGGATTTGTCTCTCAATCACTCCGTGCCATCCTCACTTTTGATCCTTTCCAGGGCCTTCTATGTGTCTGGAAAATTGAAGCCAGAGGAAGCTGTTCGAGCTACACTGACTTCTATGCCAGATGAAGTGGTGGATACTATTAATGTTACATCATTGCCGTCTGAAGATTCTGTTTCTGAAAGGAGGAGGAAGTTGGAGTACTTAGAGATGCAGGAAGAAATGATCAAGGAGGAAGAAGAGCGGGAGGAAGAAGAGCAACGCAGAATCAAGGAATCTAAAGCTAGTCAAGAAGATGTGGCATTGAAAGAGATGACTATTCCAACAGCAAGAGAAGCACAAGAGCAAGCCAAGGAAAGGACACTAGAAAAGCAAGAGCAGCTTTGCGAACTAAGTCGTGCTTTGGCTGTTTTAGCTTCTGCATCTTCAGTGAGTACAGAGCGTGAAGAATTCCTGAGGCTCGTAAGCAAGGAGATTGAACTTTACAATAGCATGGTGGAAAAGGATGGTACAGATGGTGAAAAGGATGCCTTCAAGGCTTATAGAGCTGCTGCTCGAGATGAAACTGATACTGCTGGTGTTGAAGATGAAACTGATCATGTTTCATCAGCACTCATAGATAAGGTTGATTCGATGCTTCAAAATCTGGAAAAGGAAATTGATGATGTGGATGCGCAAATTGGTGATCGCTACCAACTACTTGACAGGGATTTTGATGGGAAAGTAACTGCTGAGGAGGTTGCAGCTGCTGCAAACTATCTGAAGAATACTTTAGGCAAGGAAGGTGTCCAAGAACTCATAGGCAACCTCTCGAAAGATAGAGATGGTAAAATTCTTGTGGAAGACATTGTGAAATTGGGAAGTCGGACTGAAGATGCAAACAACCCAGATGAAGATGGGCGAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

717

Amino Acids

81.33

Weight (kDa)

5.47

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LETM1_RBD	PF07766	204 - 437	3.2e-86	LETM1-like, RBD
EF-hand_7	PF13499	640 - 700	2.9e-06	EF-hand domain pair

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004000)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67300 AT1G67300 AT1G67300 AT1G67300 AT1G67300 AT1G67300 AT1G67300
fragaria_vesca	FvH4_1g04310 FvH4_1g04310 FvH4_1g04310 FvH4_1g04310 FvH4_1g04310
malus_domestica	MD02G1042800.v1.1 MD15G1181400.v1.1
prunus_persica	Prupe.7G234100_v2.0.a1
pyrus_communis	pycom02g03560 pycom15g16380
rosa_chinensis	RchiOBHm_Chr2g0089961
rosa_laevigata	RLG00000016064
rosa_multiflora	Rmu_sc0002384.1_g000011 Rmu_sc0005594.1_g000018
rosa_roxburghii	Rroxscaffold_2G00151510
rosa_rugosa	Rorug02G0003800 Rorug02G0003900 Rorug02G0004000
rosa_samantha	Rh1AG411000 Rh1AG411600 Rh1AG411800 Rh2AG049200 Rh2BG048100 Rh2CG050200 Rh2DG049300
rosa_wichuraiana	Rw2G004100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1920
AccBSI	CCGCTC	3 cut(s)	879, 1192, 1489
AccII	CGCG	1 cut(s)	640
AclWI	GGATC	4 cut(s)	203, 437, 575, 1285
AcoI	YGGCCR	2 cut(s)	170, 237
AcsI	RAATTY	5 cut(s)	103, 161, 704, 1694, 2076
AcuI	CTGAAG	4 cut(s)	1431, 1656, 2027, 2136
AcyI	GRCGYC	1 cut(s)	123
AdeI	CACNNNGTG	1 cut(s)	1273
AfaI	GTAC	6 cut(s)	214, 643, 1066, 1448, 1681, 1756
AfiI	CCNNNNNNNGG	5 cut(s)	182, 465, 942, 1300, 1602
AflIII	ACRYGT	2 cut(s)	638, 741
AgeI	ACCGGT	1 cut(s)	935
AjnI	CCWGG	1 cut(s)	1298
AjuI	GAANNNNNNNTTGG	2 cut(s)	146, 178
AleI	CACNNNNGTG	1 cut(s)	560
Alw26I	GTCTC	3 cut(s)	384, 952, 1263
AlwI	GGATC	4 cut(s)	203, 437, 575, 1285
AlwNI	CAGNNNCTG	2 cut(s)	634, 1994
Ama87I	CYCGRG	2 cut(s)	80, 1800
AoxI	GGCC	9 cut(s)	170, 237, 271, 331, 360, 414, 477, 1016, 1302
ApoI	RAATTY	5 cut(s)	103, 161, 704, 1694, 2076
ArsI	GACNNNNNNTTYG	4 cut(s)	261, 293, 1940, 1972
AseI	ATTAAT	1 cut(s)	1389
AsiGI	ACCGGT	1 cut(s)	935
Asp700I	GAANNNNTTC	1 cut(s)	1341
AspLEI	GCGC	1 cut(s)	1921
AspS9I	GGNCC	6 cut(s)	414, 434, 477, 933, 1017, 1302
AsuC2I	CCSGG	2 cut(s)	251, 275
AsuHPI	GGTGA	3 cut(s)	211, 1775, 1940
AvaI	CYCGRG	2 cut(s)	80, 1800
AvaII	GGWCC	2 cut(s)	434, 933
AxyI	CCTNAGG	1 cut(s)	1700
BarI	GAAGNNNNNNTAC	2 cut(s)	1430, 1462
BbsI	GAAGAC	2 cut(s)	1170, 2094
BbvCI	CCTCAGC	3 cut(s)	335, 929, 1977
BccI	CCATC	9 cut(s)	175, 186, 905, 1285, 1745, 1754, 1955, 2063, 2135
BceAI	ACGGC	1 cut(s)	1390
BcgI	CGANNNNNNTGC	2 cut(s)	565, 599
BciT130I	CCWGG	1 cut(s)	1300
BciVI	GTATCC	1 cut(s)	1375
BclI	TGATCA	2 cut(s)	1470, 1840
BcnI	CCSGG	2 cut(s)	251, 275
BcoDI	GTCTC	3 cut(s)	384, 952, 1263
BfaI	CTAG	3 cut(s)	665, 1530, 1610
BfmI	CTRYAG	1 cut(s)	371
BfuI	GTATCC	1 cut(s)	1375
BglI	GCCNNNNNGGC	3 cut(s)	96, 359, 1781
BglII	AGATCT	1 cut(s)	904
BmcAI	AGTACT	1 cut(s)	1448
Bme1390I	CCNGG	3 cut(s)	251, 275, 1300
Bme18I	GGWCC	2 cut(s)	434, 933
BmeT110I	CYCGRG	2 cut(s)	80, 1800
BmgT120I	GGNCC	6 cut(s)	414, 434, 477, 933, 1017, 1302
BmiI	GGNNCC	2 cut(s)	436, 1019
BmrFI	CCNGG	3 cut(s)	251, 275, 1300
BmrI	ACTGGG	1 cut(s)	484
BmsI	GCATC	8 cut(s)	65, 1060, 1446, 1676, 1762, 1869, 1906, 2110
BmuI	ACTGGG	1 cut(s)	484
BpiI	GAAGAC	2 cut(s)	1170, 2094
BpmI	CTGGAG	1 cut(s)	598
Bpu10I	CCTNAGC	3 cut(s)	335, 929, 1977
BpuEI	CTTGAG	3 cut(s)	572, 710, 856
BpuMI	CCSGG	2 cut(s)	251, 275
BsaBI	GATNNNNATC	1 cut(s)	315
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	1 cut(s)	952
BsaJI	CCNNGG	5 cut(s)	91, 249, 357, 1299, 1596
BsaWI	WCCGGW	1 cut(s)	935
BsaXI	ACNNNNNCTCC	2 cut(s)	497, 527
Bsc4I	CCNNNNNNNGG	5 cut(s)	182, 465, 942, 1300, 1602
Bse118I	RCCGGY	5 cut(s)	119, 235, 715, 924, 935
Bse1I	ACTGG	3 cut(s)	73, 479, 536
Bse21I	CCTNAGG	1 cut(s)	1700
Bse3DI	GCAATG	4 cut(s)	85, 518, 792, 1400
Bse8I	GATNNNNATC	1 cut(s)	315
BseBI	CCWGG	1 cut(s)	1300
BseDI	CCNNGG	5 cut(s)	91, 249, 357, 1299, 1596
BseGI	GGATG	5 cut(s)	56, 1277, 1756, 1777, 1921
BseJI	GATNNNNATC	1 cut(s)	315
BseLI	CCNNNNNNNGG	5 cut(s)	182, 465, 942, 1300, 1602
BseMI	GCAATG	4 cut(s)	85, 518, 792, 1400
BseMII	CTCAG	7 cut(s)	215, 349, 395, 920, 1117, 1691, 1968
BseNI	ACTGG	3 cut(s)	73, 479, 536
BseRI	GAGGAG	4 cut(s)	40, 971, 1447, 1994
BsgI	GTGCAG	1 cut(s)	960
Bsh1236I	CGCG	1 cut(s)	640
BshFI	GGCC	9 cut(s)	172, 239, 273, 333, 362, 416, 479, 1018, 1304
BshTI	ACCGGT	1 cut(s)	935
BsiHKCI	CYCGRG	2 cut(s)	80, 1800
BslFI	GGGAC	2 cut(s)	56, 420
BslI	CCNNNNNNNGG	5 cut(s)	182, 465, 942, 1300, 1602
BsmAI	GTCTC	3 cut(s)	384, 952, 1263
BsmFI	GGGAC	2 cut(s)	56, 420
BsnI	GGCC	9 cut(s)	172, 239, 273, 333, 362, 416, 479, 1018, 1304
Bso31I	GGTCTC	1 cut(s)	952
BsoBI	CYCGRG	2 cut(s)	80, 1800
Bsp143I	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
BspANI	GGCC	9 cut(s)	172, 239, 273, 333, 362, 416, 479, 1018, 1304
BspCNI	CTCAG	7 cut(s)	214, 348, 394, 921, 1116, 1692, 1969
BspFNI	CGCG	1 cut(s)	640
BspLI	GGNNCC	2 cut(s)	436, 1019
BspMAI	CTGCAG	1 cut(s)	375
BspPI	GGATC	4 cut(s)	203, 437, 575, 1285
BspQI	GCTCTTC	2 cut(s)	1479, 1494
BspTNI	GGTCTC	1 cut(s)	952
BsrBI	CCGCTC	3 cut(s)	879, 1192, 1489
BsrDI	GCAATG	4 cut(s)	85, 518, 792, 1400
BsrFI	RCCGGY	5 cut(s)	119, 235, 715, 924, 935
BsrI	ACTGG	3 cut(s)	73, 479, 536
BssAI	RCCGGY	5 cut(s)	119, 235, 715, 924, 935
BssECI	CCNNGG	5 cut(s)	91, 249, 357, 1299, 1596
BssMI	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	2 cut(s)	357, 1596
Bst2UI	CCWGG	1 cut(s)	1300
Bst4CI	ACNGT	2 cut(s)	95, 217
Bst6I	CTCTTC	3 cut(s)	771, 1479, 1494
BstACI	GRCGYC	1 cut(s)	123
BstAPI	GCANNNNNTGC	1 cut(s)	1994
BstC8I	GCNNGC	6 cut(s)	297, 489, 594, 926, 1016, 1593
BstDSI	CCRYGG	1 cut(s)	91
BstF5I	GGATG	5 cut(s)	56, 1277, 1756, 1777, 1921
BstFNI	CGCG	1 cut(s)	640
BstHHI	GCGC	1 cut(s)	1921
BstKTI	GATC	9 cut(s)	198, 319, 432, 570, 907, 1293, 1473, 1843, 1933
BstMAI	GTCTC	3 cut(s)	384, 952, 1263
BstMBI	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
BstNI	CCWGG	1 cut(s)	1300
BstNSI	RCATGY	1 cut(s)	745
BstSCI	CCNGG	3 cut(s)	249, 273, 1298
BstSFI	CTRYAG	1 cut(s)	371
BstUI	CGCG	1 cut(s)	640
BstV2I	GAAGAC	2 cut(s)	1170, 2094
BstX2I	RGATCY	2 cut(s)	567, 904
BstXI	CCANNNNNNTGG	2 cut(s)	424, 850
BstYI	RGATCY	2 cut(s)	567, 904
Bsu36I	CCTNAGG	1 cut(s)	1700
BsuI	GTATCC	1 cut(s)	1375
BsuRI	GGCC	9 cut(s)	172, 239, 273, 333, 362, 416, 479, 1018, 1304
BtgI	CCRYGG	1 cut(s)	91
BtsCI	GGATG	5 cut(s)	56, 1277, 1756, 1777, 1921
BtsI	GCAGTG	2 cut(s)	342, 684
BtsIMutI	CAGTG	6 cut(s)	80, 342, 555, 684, 1352, 1680
Cac8I	GCNNGC	6 cut(s)	297, 489, 594, 926, 1016, 1593
CaiI	CAGNNNCTG	2 cut(s)	634, 1994
CfoI	GCGC	1 cut(s)	1921
Cfr10I	RCCGGY	5 cut(s)	119, 235, 715, 924, 935
Cfr13I	GGNCC	6 cut(s)	414, 434, 477, 933, 1017, 1302
CseI	GACGC	3 cut(s)	112, 646, 1217
Csp6I	GTAC	6 cut(s)	213, 642, 1065, 1447, 1680, 1755
CspAI	ACCGGT	1 cut(s)	935
CviAII	CATG	5 cut(s)	460, 700, 742, 1738, 1844
CviQI	GTAC	6 cut(s)	213, 642, 1065, 1447, 1680, 1755
DpnI	GATC	9 cut(s)	197, 318, 431, 569, 906, 1292, 1472, 1842, 1932
DpnII	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
DraIII	CACNNNGTG	1 cut(s)	1273
EaeI	YGGCCR	2 cut(s)	170, 237
Eam1104I	CTCTTC	3 cut(s)	771, 1479, 1494
EarI	CTCTTC	3 cut(s)	771, 1479, 1494
EciI	GGCGGA	1 cut(s)	1123
Eco130I	CCWWGG	2 cut(s)	357, 1596
Eco147I	AGGCCT	1 cut(s)	333
Eco31I	GGTCTC	1 cut(s)	952
Eco32I	GATATC	1 cut(s)	655
Eco47I	GGWCC	2 cut(s)	434, 933
Eco57I	CTGAAG	4 cut(s)	1431, 1656, 2027, 2136
Eco81I	CCTNAGG	1 cut(s)	1700
Eco88I	CYCGRG	2 cut(s)	80, 1800
EcoO109I	RGGNCCY	2 cut(s)	1017, 1302
EcoRI	GAATTC	4 cut(s)	103, 161, 704, 1694
EcoRII	CCWGG	1 cut(s)	1298
EcoRV	GATATC	1 cut(s)	655
EcoT14I	CCWWGG	2 cut(s)	357, 1596
EcoT22I	ATGCAT	1 cut(s)	1075
ErhI	CCWWGG	2 cut(s)	357, 1596
FaeI	CATG	5 cut(s)	463, 703, 745, 1741, 1847
FalI	AAGNNNNNCTT	8 cut(s)	1155, 1187, 1611, 1643, 1630, 1662, 1760, 1792
FaqI	GGGAC	2 cut(s)	56, 420
FatI	CATG	5 cut(s)	459, 699, 741, 1737, 1843
FauI	CCCGC	4 cut(s)	71, 445, 1185, 1482
FbaI	TGATCA	2 cut(s)	1470, 1840
FokI	GGATG	5 cut(s)	43, 1264, 1763, 1784, 1928
FspBI	CTAG	3 cut(s)	665, 1530, 1610
FspI	TGCGCA	1 cut(s)	1920
GlaI	GCGC	1 cut(s)	1920
GsuI	CTGGAG	1 cut(s)	598
HaeIII	GGCC	9 cut(s)	172, 239, 273, 333, 362, 416, 479, 1018, 1304
HgaI	GACGC	3 cut(s)	112, 646, 1217
HhaI	GCGC	1 cut(s)	1921
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	5 cut(s)	463, 703, 745, 1741, 1847
Hin6I	GCGC	1 cut(s)	1919
HinP1I	GCGC	1 cut(s)	1919
HincII	GTYRAC	1 cut(s)	516
HindII	GTYRAC	1 cut(s)	516
HindIII	AAGCTT	3 cut(s)	297, 485, 590
HinfI	GANTC	8 cut(s)	377, 607, 1101, 1151, 1415, 1512, 1520, 1874
HphI	GGTGA	3 cut(s)	211, 1775, 1940
Hpy166II	GTNNAC	1 cut(s)	516
Hpy188I	TCNGA	8 cut(s)	180, 191, 384, 1162, 1411, 1426, 2007, 2112
Hpy8I	GTNNAC	1 cut(s)	516
HpyAV	CCTTC	8 cut(s)	263, 379, 612, 759, 839, 1315, 1786, 2021
HpyCH4III	ACNGT	2 cut(s)	95, 217
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	5 cut(s)	463, 703, 745, 1741, 1847
HspAI	GCGC	1 cut(s)	1919
KroI	GCCGGC	1 cut(s)	924
KroNI	GCCGGC	1 cut(s)	926
Ksp22I	TGATCA	2 cut(s)	1470, 1840
Kzo9I	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
LguI	GCTCTTC	2 cut(s)	1479, 1494
LmnI	GCTCC	4 cut(s)	27, 876, 1095, 1189
LweI	GCATC	8 cut(s)	65, 1060, 1446, 1676, 1762, 1869, 1906, 2110
MaeI	CTAG	3 cut(s)	665, 1530, 1610
MaeIII	GTNAC	5 cut(s)	49, 217, 1152, 1393, 1969
MalI	GATC	9 cut(s)	197, 318, 431, 569, 906, 1292, 1472, 1842, 1932
MbiI	CCGCTC	3 cut(s)	879, 1192, 1489
MboI	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
MflI	RGATCY	2 cut(s)	567, 904
MluI	ACGCGT	1 cut(s)	638
MlyI	GAGTC	4 cut(s)	386, 601, 1095, 1160
MmeI	TCCRAC	4 cut(s)	1230, 1422, 1592, 2090
Mph1103I	ATGCAT	1 cut(s)	1075
MroNI	GCCGGC	1 cut(s)	924
MroXI	GAANNNNTTC	1 cut(s)	1341
MseI	TTAA	6 cut(s)	543, 920, 984, 1113, 1130, 1389
MslI	CAYNNNNRTG	1 cut(s)	560
MspA1I	CMGCKG	3 cut(s)	634, 650, 1991
MspR9I	CCNGG	3 cut(s)	251, 275, 1300
MvaI	CCWGG	1 cut(s)	1300
MvnI	CGCG	1 cut(s)	640
NaeI	GCCGGC	1 cut(s)	926
NciI	CCSGG	2 cut(s)	251, 275
NdeII	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
NgoMIV	GCCGGC	1 cut(s)	924
NlaIII	CATG	5 cut(s)	463, 703, 745, 1741, 1847
NlaIV	GGNNCC	2 cut(s)	436, 1019
NmeAIII	GCCGAG	1 cut(s)	531
NmuCI	GTSAC	3 cut(s)	49, 217, 1152
NsbI	TGCGCA	1 cut(s)	1920
NsiI	ATGCAT	1 cut(s)	1075
NspI	RCATGY	1 cut(s)	745
OliI	CACNNNNGTG	1 cut(s)	560
PaeR7I	CTCGAG	1 cut(s)	1800
PceI	AGGCCT	1 cut(s)	333
PciI	ACATGT	1 cut(s)	741
PciSI	GCTCTTC	2 cut(s)	1479, 1494
PcsI	WCGNNNNNNNCGW	1 cut(s)	204
PdiI	GCCGGC	1 cut(s)	926
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	4 cut(s)	1415, 1512, 1520, 1874
PinAI	ACCGGT	1 cut(s)	935
PleI	GAGTC	4 cut(s)	385, 601, 1095, 1159
PpsI	GAGTC	4 cut(s)	385, 601, 1095, 1159
PscI	ACATGT	1 cut(s)	741
PshBI	ATTAAT	1 cut(s)	1389
Psp6I	CCWGG	1 cut(s)	1298
PspGI	CCWGG	1 cut(s)	1298
PspN4I	GGNNCC	2 cut(s)	436, 1019
PspPI	GGNCC	6 cut(s)	414, 434, 477, 933, 1017, 1302
PsrI	GAACNNNNNNTAC	2 cut(s)	809, 841
PstI	CTGCAG	1 cut(s)	375
PstNI	CAGNNNCTG	2 cut(s)	634, 1994
PsuI	RGATCY	2 cut(s)	567, 904
PvuII	CAGCTG	3 cut(s)	634, 650, 1991
RsaI	GTAC	6 cut(s)	214, 643, 1066, 1448, 1681, 1756
RsaNI	GTAC	6 cut(s)	213, 642, 1065, 1447, 1680, 1755
RseI	CAYNNNNRTG	1 cut(s)	560
SapI	GCTCTTC	2 cut(s)	1479, 1494
SaqAI	TTAA	6 cut(s)	543, 920, 984, 1113, 1130, 1389
Sau3AI	GATC	9 cut(s)	195, 316, 429, 567, 904, 1290, 1470, 1840, 1930
Sau96I	GGNCC	6 cut(s)	414, 434, 477, 933, 1017, 1302
ScaI	AGTACT	1 cut(s)	1448
SchI	GAGTC	4 cut(s)	386, 601, 1095, 1160
ScrFI	CCNGG	3 cut(s)	251, 275, 1300
SfaNI	GCATC	8 cut(s)	65, 1060, 1446, 1676, 1762, 1869, 1906, 2110
SfcI	CTRYAG	1 cut(s)	371
Sfr274I	CTCGAG	1 cut(s)	1800
SgrAI	CRCCGGYG	1 cut(s)	119
SinI	GGWCC	2 cut(s)	434, 933
SlaI	CTCGAG	1 cut(s)	1800
SmiMI	CAYNNNNRTG	1 cut(s)	560
SmlI	CTYRAG	4 cut(s)	587, 725, 871, 1800
SmoI	CTYRAG	4 cut(s)	587, 725, 871, 1800
SseBI	AGGCCT	1 cut(s)	333
SspMI	CTAG	3 cut(s)	665, 1530, 1610
StuI	AGGCCT	1 cut(s)	333
StyD4I	CCNGG	3 cut(s)	249, 273, 1298
StyI	CCWWGG	2 cut(s)	357, 1596
TaaI	ACNGT	2 cut(s)	95, 217
TaqI	TCGA	7 cut(s)	8, 146, 575, 1345, 1801, 1877, 2057
TaqII	GACCGA	1 cut(s)	422
TatI	WGTACW	2 cut(s)	1446, 1679
TauI	GCSGC	2 cut(s)	172, 356
TfiI	GAWTC	4 cut(s)	1415, 1512, 1520, 1874
Tru1I	TTAA	6 cut(s)	543, 920, 984, 1113, 1130, 1389
Tru9I	TTAA	6 cut(s)	543, 920, 984, 1113, 1130, 1389
TscAI	CASTG	6 cut(s)	80, 349, 562, 684, 1359, 1680
TseFI	GTSAC	3 cut(s)	49, 217, 1152
Tsp45I	GTSAC	3 cut(s)	49, 217, 1152
TspDTI	ATGAA	8 cut(s)	688, 803, 1005, 1386, 1821, 1839, 1848, 2151
TspGWI	ACGGA	2 cut(s)	196, 1261
TspRI	CASTG	6 cut(s)	80, 349, 562, 684, 1359, 1680
VpaK11BI	GGWCC	2 cut(s)	434, 933
VspI	ATTAAT	1 cut(s)	1389
XapI	RAATTY	5 cut(s)	103, 161, 704, 1694, 2076
XceI	RCATGY	1 cut(s)	745
XhoI	CTCGAG	1 cut(s)	1800
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	3 cut(s)	665, 1530, 1610
ZrmI	AGTACT	1 cut(s)	1448
Zsp2I	ATGCAT	1 cut(s)	1075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.