MD02G1042800.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
3518172 .. 3522949
4778 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1042800.v1.1.491

Sequence Viewer

Length: 1503 bp
ATGCGGGGCCACCAATGCGAAGCTTTCTCGATATACAATCGGTTGTCATCGAGAGACCATTCAAATACCATTGACATGGATACGAATGAGTTGATGGATCCTCTTGACATGGAAGAAAATTCAGCTCTTTTACAGAAAAGTACAGTTCCAGAACATTCAAACCCCTCATGGAAGCGGTCTTTTCCCCATGTGCTTGTGGCAACTCTATCTTCATTCTTGTTTGGCTACCATCTTGGGGTAGTTAATGAACCGCTCGAAAGCATTTCTAAAGATCTTGGTTTTAAGGGAAATACCTTGGCAGAAGGTTTGGTGGTGAGTACATGCTTGGGAGGTGCCTTTATTGGATCTTTATTCAGTGGATGGTTAGCCGATGGAGTAGGACGTCGTAGGGCTTTTCAACTGTGTGCATTGCCCATGATAATTGGTGCTGCTATGAGTGCATCAACCAAAACTCTTGCTGGTATGCTTATAGGAAGGTTATTTGTTGGGACTGGTATGGGCCTCGGCCCTCCTGTTGCCTCTCTTTATGTGACTGAGGTTTCTCCTGCTTTTGTGAGGGGTACTTATGGCAGTTTGATCCAGATTGCAACATGCCTGGGAATTATGGGGGCTCTTTTTGTGGGAATCCCTGTTAAAGAAATCGCTGGCTGGTGGCGTGTTTGTTTTTGGGTATCTATAATTCCAGCTGTAACACTGGCTCTTGCCATGTTATTCTGTGCTGAGAGTCCACATTGGCTACATAAGCAAGGAAGAACTTCTGAGGCAGAAGCCCAATTTGAGAAACTCCTTGGTGGATCACATGTCAAAACTGCCATGGCAGATTTAGCCAAGTTGGACAGGGGAGATGAGACAGATACTGTAAGCCTTTCAGAGTTGTTCCATGGCCGCCATTTTAGAGTGGTTTTTATTGGGTCAACCCTATTTGCTTTACAACAGTTATCTGGTATCAATGCTGTCTTTTACTTCTCCTCGGCTGTATTTAAAAGTGCCGGAGTACCATCAGGCCTCGCAAATGCCTTTATAGGAATCGCAAATTTGTCAGGATCCATGGTTGCAATGCTTTTGATGGATAAAGTAGGGAGGAAGCTGCTACTCTTATGGAGCTTTTTTGGCATGGCGATGTCAATGGGTCTTCAAGTTGCTGCGGCAAGCTTTAATTCATCAGGGTCTGGATCACTGTACCTATCTGTTGGTGGAATGCTAATGTTCGTCTTAACATTTGCTCTAGGAGCTGGTCCAGTTCCAGGTCTTCTTTTACCAGAAATATTCCCCAACCGTATTAGGGCAAAAGCAATGGCCGTCTGTATGTCAGTGCATTGGGTGATTAATTTCTTTGTGGGATTGCTATTCTTGCAACTGCTTGAACAACTTGGTCCGCAGCTTCTGTACTCTATATTTGGCGCCTTTTGCATGATGGCTGTGGTTTTCGTGAAGCGAAATGTGATCGAAACAAAAGGAAAATCGCTCCAAGAAATCGAGATAGCACTCCTTCCACAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

501

Amino Acids

53.88

Weight (kDa)

7.64

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 64 - 494 3.6e-98 Sugar (and other) transporter
MFS_1 PF07690 70 - 408 1.1e-20 Major Facilitator Superfamily
MFS_1 PF07690 336 - 479 5.9e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 385
AccB1I GGYRCC 2 cut(s) 332, 1400
AccBSI CCGCTC 1 cut(s) 253
AciI CCGC 6 cut(s) 4, 175, 251, 886, 1145, 1376
AclWI GGATC 8 cut(s) 92, 105, 352, 571, 802, 1038, 1051, 1180
AcoI YGGCCR 2 cut(s) 883, 1296
AcsI RAATTY 2 cut(s) 118, 1033
AcyI GRCGYC 2 cut(s) 382, 1401
AfaI GTAC 6 cut(s) 142, 319, 562, 996, 1181, 1388
AfiI CCNNNNNNNGG 3 cut(s) 235, 1244, 1282
AflIII ACRYGT 1 cut(s) 799
AgsI TTSAA 5 cut(s) 63, 159, 398, 1136, 1364
AjnI CCWGG 2 cut(s) 594, 1243
AluBI AGCT 8 cut(s) 23, 125, 686, 1087, 1104, 1152, 1232, 1381
AluI AGCT 8 cut(s) 23, 125, 686, 1087, 1104, 1152, 1232, 1381
Alw26I GTCTC 2 cut(s) 48, 842
AlwI GGATC 8 cut(s) 92, 105, 352, 571, 802, 1038, 1051, 1180
AlwNI CAGNNNCTG 3 cut(s) 857, 1169, 1384
AoxI GGCC 6 cut(s) 7, 499, 505, 883, 1003, 1296
ApeKI GCWGC 4 cut(s) 428, 1087, 1142, 1378
ApoI RAATTY 2 cut(s) 118, 1033
AseI ATTAAT 1 cut(s) 1326
Asp700I GAANNNNTTC 1 cut(s) 754
AspLEI GCGC 1 cut(s) 1403
AspS9I GGNCC 5 cut(s) 7, 499, 506, 1235, 1373
AsuHPI GGTGA 2 cut(s) 325, 1333
AvaII GGWCC 2 cut(s) 1235, 1373
BamHI GGATCC 2 cut(s) 97, 1043
BanI GGYRCC 2 cut(s) 332, 1400
BanII GRGCYC 1 cut(s) 613
BbsI GAAGAC 2 cut(s) 1124, 1241
BbvI GCAGC 4 cut(s) 415, 1074, 1129, 1390
BccI CCATC 7 cut(s) 88, 237, 354, 365, 1006, 1060, 1408
BceAI ACGGC 1 cut(s) 1283
BciT130I CCWGG 2 cut(s) 596, 1245
BciVI GTATCC 1 cut(s) 73
BcoDI GTCTC 2 cut(s) 48, 842
BfaI CTAG 1 cut(s) 1226
BfoI RGCGCY 1 cut(s) 1404
BfuI GTATCC 1 cut(s) 73
BglII AGATCT 1 cut(s) 271
BisI GCNGC 6 cut(s) 429, 886, 1088, 1143, 1146, 1379
BlsI GCNGC 6 cut(s) 430, 887, 1089, 1144, 1147, 1380
Bme1390I CCNGG 2 cut(s) 596, 1245
Bme18I GGWCC 2 cut(s) 1235, 1373
BmgT120I GGNCC 5 cut(s) 7, 499, 506, 1235, 1373
BmiI GGNNCC 5 cut(s) 8, 99, 334, 1045, 1402
BmrFI CCNGG 2 cut(s) 596, 1245
BmsI GCATC 1 cut(s) 449
BpiI GAAGAC 2 cut(s) 1124, 1241
BsaHI GRCGYC 2 cut(s) 382, 1401
BsaI GGTCTC 1 cut(s) 48
BsaJI CCNNGG 8 cut(s) 294, 502, 595, 787, 813, 880, 969, 1047
Bsc4I CCNNNNNNNGG 3 cut(s) 235, 1244, 1282
Bse1I ACTGG 3 cut(s) 496, 699, 1238
Bse3DI GCAATG 3 cut(s) 407, 1062, 1299
BseBI CCWGG 2 cut(s) 596, 1245
BseDI CCNNGG 8 cut(s) 294, 502, 595, 787, 813, 880, 969, 1047
BseGI GGATG 1 cut(s) 365
BseLI CCNNNNNNNGG 3 cut(s) 235, 1244, 1282
BseMI GCAATG 3 cut(s) 407, 1062, 1299
BseMII CTCAG 3 cut(s) 525, 711, 750
BseNI ACTGG 3 cut(s) 496, 699, 1238
BseRI GAGGAG 1 cut(s) 958
BseXI GCAGC 4 cut(s) 415, 1074, 1129, 1390
BshFI GGCC 6 cut(s) 9, 501, 507, 885, 1005, 1298
BshNI GGYRCC 2 cut(s) 332, 1400
BsiSI CCGG 1 cut(s) 990
BslFI GGGAC 1 cut(s) 502
BslI CCNNNNNNNGG 3 cut(s) 235, 1244, 1282
BsmAI GTCTC 2 cut(s) 48, 842
BsmFI GGGAC 1 cut(s) 502
BsmI GAATGC 1 cut(s) 1203
BsnI GGCC 6 cut(s) 9, 501, 507, 885, 1005, 1298
Bso31I GGTCTC 1 cut(s) 48
Bsp1286I GDGCHC 1 cut(s) 613
Bsp143I GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
Bsp19I CCATGG 3 cut(s) 813, 880, 1047
BspACI CCGC 6 cut(s) 4, 175, 251, 886, 1145, 1376
BspANI GGCC 6 cut(s) 9, 501, 507, 885, 1005, 1298
BspCNI CTCAG 3 cut(s) 526, 712, 751
BspLI GGNNCC 5 cut(s) 8, 99, 334, 1045, 1402
BspPI GGATC 8 cut(s) 92, 105, 352, 571, 802, 1038, 1051, 1180
BspT107I GGYRCC 2 cut(s) 332, 1400
BspTNI GGTCTC 1 cut(s) 48
BsrBI CCGCTC 1 cut(s) 253
BsrDI GCAATG 3 cut(s) 407, 1062, 1299
BsrI ACTGG 3 cut(s) 496, 699, 1238
BssECI CCNNGG 8 cut(s) 294, 502, 595, 787, 813, 880, 969, 1047
BssMI GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
BssNI GRCGYC 2 cut(s) 382, 1401
BssT1I CCWWGG 5 cut(s) 294, 787, 813, 880, 1047
Bst2UI CCWGG 2 cut(s) 596, 1245
Bst4CI ACNGT 6 cut(s) 145, 402, 859, 936, 1179, 1277
BstACI GRCGYC 2 cut(s) 382, 1401
BstC8I GCNNGC 2 cut(s) 646, 1150
BstDEI CTNAG 3 cut(s) 534, 720, 759
BstDSI CCRYGG 3 cut(s) 813, 880, 1047
BstF5I GGATG 1 cut(s) 365
BstH2I RGCGCY 1 cut(s) 1404
BstHHI GCGC 1 cut(s) 1403
BstKTI GATC 8 cut(s) 100, 274, 347, 579, 797, 1046, 1175, 1446
BstMAI GTCTC 2 cut(s) 48, 842
BstMBI GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
BstMWI GCNNNNNNNGC 8 cut(s) 15, 437, 742, 824, 1110, 1229, 1351, 1407
BstNI CCWGG 2 cut(s) 596, 1245
BstNSI RCATGY 3 cut(s) 324, 594, 803
BstSCI CCNGG 2 cut(s) 594, 1243
BstV1I GCAGC 4 cut(s) 415, 1074, 1129, 1390
BstV2I GAAGAC 2 cut(s) 1124, 1241
BstX2I RGATCY 4 cut(s) 97, 271, 344, 1043
BstXI CCANNNNNNTGG 1 cut(s) 76
BstYI RGATCY 4 cut(s) 97, 271, 344, 1043
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 6 cut(s) 9, 501, 507, 885, 1005, 1298
BtgI CCRYGG 3 cut(s) 813, 880, 1047
BtgZI GCGATG 1 cut(s) 1133
BtsCI GGATG 1 cut(s) 365
BtsIMutI CAGTG 4 cut(s) 361, 692, 1175, 1317
Cac8I GCNNGC 2 cut(s) 646, 1150
CaiI CAGNNNCTG 3 cut(s) 857, 1169, 1384
CfoI GCGC 1 cut(s) 1403
Cfr13I GGNCC 5 cut(s) 7, 499, 506, 1235, 1373
Csp6I GTAC 6 cut(s) 141, 318, 561, 995, 1180, 1387
CviQI GTAC 6 cut(s) 141, 318, 561, 995, 1180, 1387
DdeI CTNAG 3 cut(s) 534, 720, 759
DinI GGCGCC 1 cut(s) 1402
DpnI GATC 8 cut(s) 99, 273, 346, 578, 796, 1045, 1174, 1445
DpnII GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
DraI TTTAAA 1 cut(s) 982
EaeI YGGCCR 2 cut(s) 883, 1296
Eco130I CCWWGG 5 cut(s) 294, 787, 813, 880, 1047
Eco147I AGGCCT 1 cut(s) 1005
Eco24I GRGCYC 1 cut(s) 613
Eco31I GGTCTC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 1235, 1373
EcoRII CCWGG 2 cut(s) 594, 1243
EcoT14I CCWWGG 5 cut(s) 294, 787, 813, 880, 1047
EcoT38I GRGCYC 1 cut(s) 613
EgeI GGCGCC 1 cut(s) 1402
EheI GGCGCC 1 cut(s) 1402
ErhI CCWWGG 5 cut(s) 294, 787, 813, 880, 1047
FaqI GGGAC 1 cut(s) 502
Fnu4HI GCNGC 6 cut(s) 429, 886, 1088, 1143, 1146, 1379
FokI GGATG 1 cut(s) 372
FriOI GRGCYC 1 cut(s) 613
Fsp4HI GCNGC 6 cut(s) 429, 886, 1088, 1143, 1146, 1379
FspBI CTAG 1 cut(s) 1226
GlaI GCGC 1 cut(s) 1402
GluI GCNGC 6 cut(s) 429, 886, 1088, 1143, 1146, 1379
HaeII RGCGCY 1 cut(s) 1404
HaeIII GGCC 6 cut(s) 9, 501, 507, 885, 1005, 1298
HapII CCGG 1 cut(s) 990
HhaI GCGC 1 cut(s) 1403
Hin1I GRCGYC 2 cut(s) 382, 1401
Hin6I GCGC 1 cut(s) 1401
HinP1I GCGC 1 cut(s) 1401
HincII GTYRAC 1 cut(s) 915
HindII GTYRAC 1 cut(s) 915
HindIII AAGCTT 2 cut(s) 21, 1150
HinfI GANTC 3 cut(s) 624, 724, 1026
HpaII CCGG 1 cut(s) 990
HphI GGTGA 2 cut(s) 325, 1333
Hpy166II GTNNAC 2 cut(s) 728, 915
Hpy188I TCNGA 2 cut(s) 760, 871
Hpy188III TCNNGA 9 cut(s) 28, 51, 104, 149, 580, 1041, 1170, 1429, 1477
Hpy8I GTNNAC 2 cut(s) 728, 915
Hpy99I CGWCG 1 cut(s) 387
HpyAV CCTTC 3 cut(s) 296, 468, 1499
HpyCH4III ACNGT 6 cut(s) 145, 402, 859, 936, 1179, 1277
HpyCH4IV ACGT 1 cut(s) 382
HpyCH4V TGCA 7 cut(s) 407, 440, 587, 1055, 1315, 1354, 1410
HpyF10VI GCNNNNNNNGC 8 cut(s) 15, 437, 742, 824, 1110, 1229, 1351, 1407
HpyF3I CTNAG 3 cut(s) 534, 720, 759
HpySE526I ACGT 1 cut(s) 382
Hsp92I GRCGYC 2 cut(s) 382, 1401
HspAI GCGC 1 cut(s) 1401
KasI GGCGCC 1 cut(s) 1400
Kzo9I GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
LmnI GCTCC 3 cut(s) 1101, 1229, 1470
Lsp1109I GCAGC 4 cut(s) 415, 1074, 1129, 1390
LweI GCATC 1 cut(s) 449
MaeI CTAG 1 cut(s) 1226
MaeII ACGT 1 cut(s) 382
MaeIII GTNAC 2 cut(s) 529, 688
MalI GATC 8 cut(s) 99, 273, 346, 578, 796, 1045, 1174, 1445
MbiI CCGCTC 1 cut(s) 253
MboI GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
MboII GAAGA 5 cut(s) 125, 201, 762, 1124, 1241
MflI RGATCY 4 cut(s) 97, 271, 344, 1043
MhlI GDGCHC 1 cut(s) 613
MluCI AATT 8 cut(s) 118, 420, 600, 678, 773, 1033, 1156, 1327
Mly113I GGCGCC 1 cut(s) 1401
MlyI GAGTC 1 cut(s) 733
MmeI TCCRAC 1 cut(s) 813
MroXI GAANNNNTTC 1 cut(s) 754
MseI TTAA 7 cut(s) 243, 282, 633, 981, 1155, 1214, 1326
MslI CAYNNNNRTG 2 cut(s) 74, 1118
MspA1I CMGCKG 1 cut(s) 686
MspI CCGG 1 cut(s) 990
MspR9I CCNGG 2 cut(s) 596, 1245
Mva1269I GAATGC 1 cut(s) 1203
MvaI CCWGG 2 cut(s) 596, 1245
MwoI GCNNNNNNNGC 8 cut(s) 15, 437, 742, 824, 1110, 1229, 1351, 1407
NarI GGCGCC 1 cut(s) 1401
NcoI CCATGG 3 cut(s) 813, 880, 1047
NdeII GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
NlaIV GGNNCC 5 cut(s) 8, 99, 334, 1045, 1402
NmeAIII GCCGAG 2 cut(s) 483, 950
NmuCI GTSAC 1 cut(s) 529
NspI RCATGY 3 cut(s) 324, 594, 803
PceI AGGCCT 1 cut(s) 1005
PciI ACATGT 1 cut(s) 799
PctI GAATGC 1 cut(s) 1203
PdmI GAANNNNTTC 1 cut(s) 754
PfeI GAWTC 2 cut(s) 624, 1026
PkrI GCNGC 6 cut(s) 430, 887, 1089, 1144, 1147, 1380
PleI GAGTC 1 cut(s) 732
PluTI GGCGCC 1 cut(s) 1404
PpsI GAGTC 1 cut(s) 732
PscI ACATGT 1 cut(s) 799
PshBI ATTAAT 1 cut(s) 1326
Psp6I CCWGG 2 cut(s) 594, 1243
PspGI CCWGG 2 cut(s) 594, 1243
PspN4I GGNNCC 5 cut(s) 8, 99, 334, 1045, 1402
PspPI GGNCC 5 cut(s) 7, 499, 506, 1235, 1373
PstNI CAGNNNCTG 3 cut(s) 857, 1169, 1384
PsuI RGATCY 4 cut(s) 97, 271, 344, 1043
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 6 cut(s) 142, 319, 562, 996, 1181, 1388
RsaNI GTAC 6 cut(s) 141, 318, 561, 995, 1180, 1387
RseI CAYNNNNRTG 2 cut(s) 74, 1118
SaqAI TTAA 7 cut(s) 243, 282, 633, 981, 1155, 1214, 1326
SatI GCNGC 6 cut(s) 429, 886, 1088, 1143, 1146, 1379
Sau3AI GATC 8 cut(s) 97, 271, 344, 576, 794, 1043, 1172, 1443
Sau96I GGNCC 5 cut(s) 7, 499, 506, 1235, 1373
SchI GAGTC 1 cut(s) 733
ScrFI CCNGG 2 cut(s) 596, 1245
SduI GDGCHC 1 cut(s) 613
SfaNI GCATC 1 cut(s) 449
SfoI GGCGCC 1 cut(s) 1402
SinI GGWCC 2 cut(s) 1235, 1373
SmiMI CAYNNNNRTG 2 cut(s) 74, 1118
Sse9I AATT 8 cut(s) 118, 420, 600, 678, 773, 1033, 1156, 1327
SseBI AGGCCT 1 cut(s) 1005
SsiI CCGC 6 cut(s) 4, 175, 251, 886, 1145, 1376
SspDI GGCGCC 1 cut(s) 1400
SspI AATATT 1 cut(s) 1266
SspMI CTAG 1 cut(s) 1226
StuI AGGCCT 1 cut(s) 1005
StyD4I CCNGG 2 cut(s) 594, 1243
StyI CCWWGG 5 cut(s) 294, 787, 813, 880, 1047
TaaI ACNGT 6 cut(s) 145, 402, 859, 936, 1179, 1277
TaiI ACGT 1 cut(s) 385
TaqI TCGA 5 cut(s) 29, 50, 255, 1446, 1476
TasI AATT 8 cut(s) 118, 420, 600, 678, 773, 1033, 1156, 1327
TatI WGTACW 3 cut(s) 140, 317, 1386
TauI GCSGC 2 cut(s) 888, 1148
TfiI GAWTC 2 cut(s) 624, 1026
Tru1I TTAA 7 cut(s) 243, 282, 633, 981, 1155, 1214, 1326
Tru9I TTAA 7 cut(s) 243, 282, 633, 981, 1155, 1214, 1326
TscAI CASTG 4 cut(s) 361, 699, 1182, 1317
TseFI GTSAC 1 cut(s) 529
TseI GCWGC 4 cut(s) 428, 1087, 1142, 1378
Tsp45I GTSAC 1 cut(s) 529
TspDTI ATGAA 3 cut(s) 201, 261, 1149
TspRI CASTG 4 cut(s) 361, 699, 1182, 1317
VpaK11BI GGWCC 2 cut(s) 1235, 1373
VspI ATTAAT 1 cut(s) 1326
XapI RAATTY 2 cut(s) 118, 1033
XceI RCATGY 3 cut(s) 324, 594, 803
XmnI GAANNNNTTC 1 cut(s) 754
XspI CTAG 1 cut(s) 1226
ZraI GACGTC 1 cut(s) 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.