pycom02g03560
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
2391676 .. 2395127
3452 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g03560.4

Sequence Viewer

Length: 1428 bp
ATGGATACAAAAGAGTTGATGGATCCTCTTGACGTGGAAGAAAATTCAGCTCTTTTACAGAAAAGTACAGTTCAAGAACATTCAAACCCCTCATGGAAGCGGTCTTTTCCCCATGTACTTGTGGCAACTCTATCTTCATTCTTGTTTGGCTACCATCTCGGGGTAGTTAATGAACCGCTTGAAAGCATATCTAAAGATCTTGGTTTCAAGGGAAATACCTTGGCAGAAGGTTTGGTGGTGAGTACCTGTTTGGGAGGTGCCTTTATTGGATCTTTATTCAGTGGATGGTTAGCCGATGGAGTAGGACGTCGTAGGGCTTTTCAACTGTGTGCATTGCCCATGATAATTGGTGCTGCTATGAGTGCATCAACCAAAACTCTTGCTGGTATGCTTATAGGAAGGTTATTTGTTGGGACTGGTATGGGTCTGGGCCCTCCTGTTGCCTCTCTTTATGTGACAGAGGTTTCTCCTGCGTTTGTGAGGGGTACCTATGGCAGTTTCATCCAGATTGCAACATGCCTCGGGATTATGGGGGCTCTTTTTGTGGGAATCCCTGTTAAAGAAATTGCTGGCTGGTGGCGTGTTTGTTTTTGGGTATCTCTAATCCCAGCGGTAATACTGGCTCTTGCCATGTTATTCTGTGCTGAGAGTCCACATTGGCTACATAAGCAAGGAAGAACTTCTGAAGCAGAAGCTCAATTTGAGAAACTCCTTGGTGGATCACATGTCAAAACTGCCATGGCAGATTTAGCCAAGTTGGACAGGGGAGATGAGACAGATACTGTAAACCTTTCAGAGTTGTTCTATGGCCGCCATTTTAGAGTGGTTTTTATTGGGTCAACCTTATTTGCTTTACAACAGTTATCTGGTATAAATGCTGTCTTTTATTTCTCCTCGGCTGTATTTAAAAGTGCCGGAGTACCATCAGGCCTTGCAAATGCCTTTGTAGGAATCGCAAATTTGTCAGGATCCTTGGTTGCAATGCTTTTGATGGATAAAGTAGGGAGGAAGCTGCTACTCTTATGGAGCTTCTTTGGGATGGCGATGTCAATGGTTCTTCAAGTTGCTGCAGCAAGCTTTAATTCATCAGCATCTGGATCACTGTACCTATCTGTTGGTGGAATGCTTATGTTCGTCCTAACATTTGCTCTAGGAGCTGGTCCAGTTCCAGGTCTCCTTTTACCAGAAATATTCCCCAGCCGTATTAGGGCTAAAGCAATGGCCTTCTGTATGTCAGTGCATTGGGTGATAAATTTCTTTGTGGGATTGCTATTCTTGCAACTGCTTGAACAACTTGGTCCGCAGCTTCTGTACTCTATATTTGGCACCTTTTGCATGATGGCTGTGGTTTTCGTGAAGCGAAATGTGATCGAAACAAAAGGAAAATCGCTCCAAGAAATCGAGATAGCGCTCCTTCCACAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

476

Amino Acids

51.15

Weight (kDa)

8.12

Isoelectric Point (pI)

40.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 310
Acc65I GGTACC 1 cut(s) 485
AccB1I GGYRCC 3 cut(s) 257, 485, 1325
AciI CCGC 5 cut(s) 100, 176, 611, 811, 1301
AclWI GGATC 7 cut(s) 17, 30, 277, 727, 963, 976, 1105
AcoI YGGCCR 1 cut(s) 808
AcsI RAATTY 3 cut(s) 43, 958, 1252
AcuI CTGAAG 1 cut(s) 705
AcyI GRCGYC 1 cut(s) 307
AfaI GTAC 7 cut(s) 67, 117, 244, 487, 921, 1106, 1313
AfeI AGCGCT 1 cut(s) 1410
AfiI CCNNNNNNNGG 3 cut(s) 160, 1169, 1207
AflIII ACRYGT 1 cut(s) 724
AgsI TTSAA 7 cut(s) 74, 84, 182, 208, 323, 1061, 1289
AjiI CACGTC 1 cut(s) 34
AjnI CCWGG 1 cut(s) 1168
AluBI AGCT 7 cut(s) 50, 695, 1012, 1029, 1077, 1157, 1306
AluI AGCT 7 cut(s) 50, 695, 1012, 1029, 1077, 1157, 1306
Alw26I GTCTC 2 cut(s) 767, 1178
AlwI GGATC 7 cut(s) 17, 30, 277, 727, 963, 976, 1105
AlwNI CAGNNNCTG 3 cut(s) 782, 1094, 1309
Ama87I CYCGRG 2 cut(s) 158, 521
Aor51HI AGCGCT 1 cut(s) 1410
AoxI GGCC 4 cut(s) 430, 808, 928, 1221
ApaI GGGCCC 1 cut(s) 434
ApeKI GCWGC 5 cut(s) 353, 1012, 1067, 1070, 1303
ApoI RAATTY 3 cut(s) 43, 958, 1252
Asp700I GAANNNNTTC 1 cut(s) 679
Asp718I GGTACC 1 cut(s) 485
AspLEI GCGC 1 cut(s) 1411
AspS9I GGNCC 4 cut(s) 430, 431, 1160, 1298
AsuHPI GGTGA 2 cut(s) 250, 1258
AvaI CYCGRG 2 cut(s) 158, 521
AvaII GGWCC 2 cut(s) 1160, 1298
BaeGI GKGCMC 1 cut(s) 434
BamHI GGATCC 2 cut(s) 22, 968
BanI GGYRCC 3 cut(s) 257, 485, 1325
BanII GRGCYC 2 cut(s) 434, 538
BbvI GCAGC 5 cut(s) 340, 999, 1054, 1082, 1315
BccI CCATC 8 cut(s) 13, 162, 279, 290, 931, 985, 1033, 1333
BceAI ACGGC 1 cut(s) 1185
BciT130I CCWGG 1 cut(s) 1170
BcoDI GTCTC 2 cut(s) 767, 1178
BfaI CTAG 1 cut(s) 1151
BfmI CTRYAG 1 cut(s) 1068
BfoI RGCGCY 1 cut(s) 1412
BglII AGATCT 1 cut(s) 196
BisI GCNGC 6 cut(s) 354, 811, 1013, 1068, 1071, 1304
BlsI GCNGC 6 cut(s) 355, 812, 1014, 1069, 1072, 1305
Bme1390I CCNGG 1 cut(s) 1170
Bme18I GGWCC 2 cut(s) 1160, 1298
BmeT110I CYCGRG 2 cut(s) 158, 521
BmgBI CACGTC 1 cut(s) 34
BmgT120I GGNCC 4 cut(s) 430, 431, 1160, 1298
BmiI GGNNCC 6 cut(s) 24, 259, 432, 487, 970, 1327
BmrFI CCNGG 1 cut(s) 1170
BmsI GCATC 2 cut(s) 374, 1100
BsaHI GRCGYC 1 cut(s) 307
BsaI GGTCTC 1 cut(s) 1178
BsaJI CCNNGG 6 cut(s) 219, 520, 712, 738, 894, 972
Bsc4I CCNNNNNNNGG 3 cut(s) 160, 1169, 1207
Bse1I ACTGG 3 cut(s) 421, 624, 1163
Bse3DI GCAATG 3 cut(s) 332, 987, 1224
BseBI CCWGG 1 cut(s) 1170
BseDI CCNNGG 6 cut(s) 219, 520, 712, 738, 894, 972
BseGI GGATG 3 cut(s) 290, 501, 1044
BseLI CCNNNNNNNGG 3 cut(s) 160, 1169, 1207
BseMI GCAATG 3 cut(s) 332, 987, 1224
BseMII CTCAG 1 cut(s) 636
BseNI ACTGG 3 cut(s) 421, 624, 1163
BseRI GAGGAG 1 cut(s) 883
BseSI GKGCMC 1 cut(s) 434
BseXI GCAGC 5 cut(s) 340, 999, 1054, 1082, 1315
BseYI CCCAGC 2 cut(s) 607, 1196
BshFI GGCC 4 cut(s) 432, 810, 930, 1223
BshNI GGYRCC 3 cut(s) 257, 485, 1325
BsiHKCI CYCGRG 2 cut(s) 158, 521
BsiSI CCGG 1 cut(s) 915
BslFI GGGAC 1 cut(s) 427
BslI CCNNNNNNNGG 3 cut(s) 160, 1169, 1207
BsmAI GTCTC 2 cut(s) 767, 1178
BsmFI GGGAC 1 cut(s) 427
BsmI GAATGC 1 cut(s) 1128
BsnI GGCC 4 cut(s) 432, 810, 930, 1223
Bso31I GGTCTC 1 cut(s) 1178
BsoBI CYCGRG 2 cut(s) 158, 521
Bsp120I GGGCCC 1 cut(s) 430
Bsp1286I GDGCHC 2 cut(s) 434, 538
Bsp143I GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
Bsp19I CCATGG 1 cut(s) 738
BspACI CCGC 5 cut(s) 100, 176, 611, 811, 1301
BspANI GGCC 4 cut(s) 432, 810, 930, 1223
BspCNI CTCAG 1 cut(s) 637
BspLI GGNNCC 6 cut(s) 24, 259, 432, 487, 970, 1327
BspMAI CTGCAG 1 cut(s) 1072
BspPI GGATC 7 cut(s) 17, 30, 277, 727, 963, 976, 1105
BspT107I GGYRCC 3 cut(s) 257, 485, 1325
BspTNI GGTCTC 1 cut(s) 1178
BsrDI GCAATG 3 cut(s) 332, 987, 1224
BsrI ACTGG 3 cut(s) 421, 624, 1163
BssECI CCNNGG 6 cut(s) 219, 520, 712, 738, 894, 972
BssMI GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
BssNI GRCGYC 1 cut(s) 307
BssT1I CCWWGG 4 cut(s) 219, 712, 738, 972
Bst2UI CCWGG 1 cut(s) 1170
Bst4CI ACNGT 5 cut(s) 70, 327, 784, 861, 1104
BstACI GRCGYC 1 cut(s) 307
BstAPI GCANNNNNTGC 1 cut(s) 1332
BstC8I GCNNGC 2 cut(s) 571, 1075
BstDEI CTNAG 1 cut(s) 645
BstDSI CCRYGG 1 cut(s) 738
BstF5I GGATG 3 cut(s) 290, 501, 1044
BstH2I RGCGCY 1 cut(s) 1412
BstHHI GCGC 1 cut(s) 1411
BstKTI GATC 7 cut(s) 25, 199, 272, 722, 971, 1100, 1371
BstMAI GTCTC 2 cut(s) 767, 1178
BstMBI GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
BstMWI GCNNNNNNNGC 6 cut(s) 362, 667, 749, 1154, 1276, 1332
BstNI CCWGG 1 cut(s) 1170
BstNSI RCATGY 2 cut(s) 519, 728
BstSCI CCNGG 1 cut(s) 1168
BstSFI CTRYAG 1 cut(s) 1068
BstSLI GKGCMC 1 cut(s) 434
BstV1I GCAGC 5 cut(s) 340, 999, 1054, 1082, 1315
BstX2I RGATCY 4 cut(s) 22, 196, 269, 968
BstYI RGATCY 4 cut(s) 22, 196, 269, 968
BsuRI GGCC 4 cut(s) 432, 810, 930, 1223
BtgI CCRYGG 1 cut(s) 738
BtgZI GCGATG 1 cut(s) 1058
BtrI CACGTC 1 cut(s) 34
BtsCI GGATG 3 cut(s) 290, 501, 1044
BtsIMutI CAGTG 3 cut(s) 286, 1100, 1242
Cac8I GCNNGC 2 cut(s) 571, 1075
CaiI CAGNNNCTG 3 cut(s) 782, 1094, 1309
CfoI GCGC 1 cut(s) 1411
Cfr13I GGNCC 4 cut(s) 430, 431, 1160, 1298
Csp6I GTAC 7 cut(s) 66, 116, 243, 486, 920, 1105, 1312
CviAII CATG 8 cut(s) 93, 113, 340, 516, 631, 725, 739, 1336
CviQI GTAC 7 cut(s) 66, 116, 243, 486, 920, 1105, 1312
DdeI CTNAG 1 cut(s) 645
DpnI GATC 7 cut(s) 24, 198, 271, 721, 970, 1099, 1370
DpnII GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
DraI TTTAAA 1 cut(s) 907
EaeI YGGCCR 1 cut(s) 808
Eco130I CCWWGG 4 cut(s) 219, 712, 738, 972
Eco147I AGGCCT 1 cut(s) 930
Eco24I GRGCYC 2 cut(s) 434, 538
Eco31I GGTCTC 1 cut(s) 1178
Eco47I GGWCC 2 cut(s) 1160, 1298
Eco47III AGCGCT 1 cut(s) 1410
Eco57I CTGAAG 1 cut(s) 705
Eco88I CYCGRG 2 cut(s) 158, 521
EcoO109I RGGNCCY 1 cut(s) 431
EcoRII CCWGG 1 cut(s) 1168
EcoT14I CCWWGG 4 cut(s) 219, 712, 738, 972
EcoT38I GRGCYC 2 cut(s) 434, 538
ErhI CCWWGG 4 cut(s) 219, 712, 738, 972
FaeI CATG 8 cut(s) 96, 116, 343, 519, 634, 728, 742, 1339
FaqI GGGAC 1 cut(s) 427
FatI CATG 8 cut(s) 92, 112, 339, 515, 630, 724, 738, 1335
Fnu4HI GCNGC 6 cut(s) 354, 811, 1013, 1068, 1071, 1304
FokI GGATG 3 cut(s) 297, 488, 1051
FriOI GRGCYC 2 cut(s) 434, 538
Fsp4HI GCNGC 6 cut(s) 354, 811, 1013, 1068, 1071, 1304
FspBI CTAG 1 cut(s) 1151
GlaI GCGC 1 cut(s) 1410
GluI GCNGC 6 cut(s) 354, 811, 1013, 1068, 1071, 1304
GsaI CCCAGC 2 cut(s) 611, 1200
HaeII RGCGCY 1 cut(s) 1412
HaeIII GGCC 4 cut(s) 432, 810, 930, 1223
HapII CCGG 1 cut(s) 915
HhaI GCGC 1 cut(s) 1411
Hin1I GRCGYC 1 cut(s) 307
Hin1II CATG 8 cut(s) 96, 116, 343, 519, 634, 728, 742, 1339
Hin6I GCGC 1 cut(s) 1409
HinP1I GCGC 1 cut(s) 1409
HincII GTYRAC 1 cut(s) 840
HindII GTYRAC 1 cut(s) 840
HindIII AAGCTT 1 cut(s) 1075
HinfI GANTC 3 cut(s) 549, 649, 951
HpaII CCGG 1 cut(s) 915
HphI GGTGA 2 cut(s) 250, 1258
Hpy166II GTNNAC 3 cut(s) 653, 787, 840
Hpy188I TCNGA 2 cut(s) 685, 796
Hpy188III TCNNGA 8 cut(s) 29, 74, 505, 523, 966, 1095, 1354, 1402
Hpy8I GTNNAC 3 cut(s) 653, 787, 840
Hpy99I CGWCG 1 cut(s) 312
HpyAV CCTTC 4 cut(s) 221, 393, 1234, 1424
HpyCH4III ACNGT 5 cut(s) 70, 327, 784, 861, 1104
HpyCH4IV ACGT 2 cut(s) 33, 307
HpyCH4V TGCA 9 cut(s) 332, 365, 512, 935, 980, 1070, 1240, 1279, 1335
HpyF10VI GCNNNNNNNGC 6 cut(s) 362, 667, 749, 1154, 1276, 1332
HpyF3I CTNAG 1 cut(s) 645
HpySE526I ACGT 2 cut(s) 33, 307
Hsp92I GRCGYC 1 cut(s) 307
Hsp92II CATG 8 cut(s) 96, 116, 343, 519, 634, 728, 742, 1339
HspAI GCGC 1 cut(s) 1409
KpnI GGTACC 1 cut(s) 489
Kzo9I GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
LmnI GCTCC 4 cut(s) 1026, 1154, 1395, 1416
Lsp1109I GCAGC 5 cut(s) 340, 999, 1054, 1082, 1315
LweI GCATC 2 cut(s) 374, 1100
MaeI CTAG 1 cut(s) 1151
MaeII ACGT 2 cut(s) 33, 307
MaeIII GTNAC 1 cut(s) 454
MalI GATC 7 cut(s) 24, 198, 271, 721, 970, 1099, 1370
MboI GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
MboII GAAGA 4 cut(s) 50, 126, 687, 1049
MflI RGATCY 4 cut(s) 22, 196, 269, 968
MhlI GDGCHC 2 cut(s) 434, 538
MluCI AATT 7 cut(s) 43, 345, 564, 698, 958, 1081, 1252
MlyI GAGTC 1 cut(s) 658
MmeI TCCRAC 1 cut(s) 738
MroXI GAANNNNTTC 1 cut(s) 679
MseI TTAA 4 cut(s) 168, 558, 906, 1080
MspA1I CMGCKG 1 cut(s) 611
MspI CCGG 1 cut(s) 915
MspR9I CCNGG 1 cut(s) 1170
Mva1269I GAATGC 1 cut(s) 1128
MvaI CCWGG 1 cut(s) 1170
MwoI GCNNNNNNNGC 6 cut(s) 362, 667, 749, 1154, 1276, 1332
NcoI CCATGG 1 cut(s) 738
NdeII GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
NlaIII CATG 8 cut(s) 96, 116, 343, 519, 634, 728, 742, 1339
NlaIV GGNNCC 6 cut(s) 24, 259, 432, 487, 970, 1327
NmeAIII GCCGAG 1 cut(s) 875
NmuCI GTSAC 1 cut(s) 454
NspI RCATGY 2 cut(s) 519, 728
PceI AGGCCT 1 cut(s) 930
PciI ACATGT 1 cut(s) 724
PctI GAATGC 1 cut(s) 1128
PdmI GAANNNNTTC 1 cut(s) 679
PfeI GAWTC 2 cut(s) 549, 951
PkrI GCNGC 6 cut(s) 355, 812, 1014, 1069, 1072, 1305
PleI GAGTC 1 cut(s) 657
PpsI GAGTC 1 cut(s) 657
PscI ACATGT 1 cut(s) 724
Psp6I CCWGG 1 cut(s) 1168
PspFI CCCAGC 2 cut(s) 607, 1196
PspGI CCWGG 1 cut(s) 1168
PspN4I GGNNCC 6 cut(s) 24, 259, 432, 487, 970, 1327
PspOMI GGGCCC 1 cut(s) 430
PspPI GGNCC 4 cut(s) 430, 431, 1160, 1298
PstI CTGCAG 1 cut(s) 1072
PstNI CAGNNNCTG 3 cut(s) 782, 1094, 1309
PsuI RGATCY 4 cut(s) 22, 196, 269, 968
RsaI GTAC 7 cut(s) 67, 117, 244, 487, 921, 1106, 1313
RsaNI GTAC 7 cut(s) 66, 116, 243, 486, 920, 1105, 1312
SaqAI TTAA 4 cut(s) 168, 558, 906, 1080
SatI GCNGC 6 cut(s) 354, 811, 1013, 1068, 1071, 1304
Sau3AI GATC 7 cut(s) 22, 196, 269, 719, 968, 1097, 1368
Sau96I GGNCC 4 cut(s) 430, 431, 1160, 1298
SchI GAGTC 1 cut(s) 658
ScrFI CCNGG 1 cut(s) 1170
SduI GDGCHC 2 cut(s) 434, 538
SfaNI GCATC 2 cut(s) 374, 1100
SfcI CTRYAG 1 cut(s) 1068
SinI GGWCC 2 cut(s) 1160, 1298
Sse9I AATT 7 cut(s) 43, 345, 564, 698, 958, 1081, 1252
SseBI AGGCCT 1 cut(s) 930
SsiI CCGC 5 cut(s) 100, 176, 611, 811, 1301
SspI AATATT 1 cut(s) 1191
SspMI CTAG 1 cut(s) 1151
StuI AGGCCT 1 cut(s) 930
StyD4I CCNGG 1 cut(s) 1168
StyI CCWWGG 4 cut(s) 219, 712, 738, 972
TaaI ACNGT 5 cut(s) 70, 327, 784, 861, 1104
TaiI ACGT 2 cut(s) 36, 310
TaqI TCGA 2 cut(s) 1371, 1401
TasI AATT 7 cut(s) 43, 345, 564, 698, 958, 1081, 1252
TatI WGTACW 3 cut(s) 65, 115, 1311
TauI GCSGC 1 cut(s) 813
TfiI GAWTC 2 cut(s) 549, 951
Tru1I TTAA 4 cut(s) 168, 558, 906, 1080
Tru9I TTAA 4 cut(s) 168, 558, 906, 1080
TscAI CASTG 3 cut(s) 286, 1107, 1242
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 5 cut(s) 353, 1012, 1067, 1070, 1303
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 4 cut(s) 126, 186, 490, 1074
TspRI CASTG 3 cut(s) 286, 1107, 1242
VpaK11BI GGWCC 2 cut(s) 1160, 1298
XapI RAATTY 3 cut(s) 43, 958, 1252
XceI RCATGY 2 cut(s) 519, 728
XmnI GAANNNNTTC 1 cut(s) 679
XspI CTAG 1 cut(s) 1151
ZraI GACGTC 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.