MD15G1181400.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
14401186 .. 14405916
4731 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1181400.v1.1.491

Sequence Viewer

Length: 1476 bp
ATGTACAAGCGGTTGTCATCGAGAGACTATTCGAATACCATTGACCTGGATACGAAAGAGTTGATGGATCCTCTTGACATGGAAGAAAACTCAGCTCTTGTACAGAAAAGTACAGTTCCAGAACTTTCAAACCCCTCATGGAAGCGATCTTTCCCCCATGTACTTGTGGCAACTCTATCTGCATTCTTGTTTGGCTACCATCTCGGGGTGGTTAATGAACCGCTTGAAAGCATTTCTAAAGATCTTGGTTTCAAAGGGAATACCTTGGCAGAAGGTGGTCTGGTGGTGAGTACTTGTTTGGGAGGTGCCTTGGTTGGATCTTTATTCAGTGGATGGTTAGCCGATGGAGTAGGACGTCGTAAGGCTTTTCAACTGTGTGCATTGCCTATGATAATTGGTGCTGTTATGAGTGCATCAACCAAAACTCTTGCTGGTATGCTTATAGGAAGGTTATTTGTTGGGACTGGTATGGGTCTGGCCCCTCCTGTTGCTTCTCTTTATGTGACAGAGGTTTCTCCTGCTTTTGTGAGGGGTACTTATGGCAGTCTCATCCAGATTGCAACATGCCTGGGGATTATGGGGGCTCTTTTTGTTGGAATTCCTGTTAAAGAAATCACTGGCTGGTGGCGTGTTTGTTTTTGGGTATCGATAATTCCAGCTGTAGTACTGGCAGTTGCCATGGTATTCTGTGCAGAGAGTCCACATTGGCTACATAAGCAAGGAAGAACTTCTGAGGCAGAAGCTCAATTTGAGAAGCTCCTTGGTGGATCACATGTCAAAACTGCCATGGCAGATTTAGCCAAGTTGGACAGGGGAGATGAGACAGATGCTGTAAGCCTTTCGGAGTTGTTTTATGGACGCCATTTTAGAGTTGTTTTTATTGGGTCAACTCTATATGCTTTACAACAGCTATCTGGTATAAATGCTGTCTTTTATTTCTCCTCGGCTGTATTTAAAAGTGCCGGAGTATCATCAGGCCTTGCAAATGCCTTTGTAGGAATCGCAAATTTGTCAGGATCTACTGTTGCAATGCTTTTGATGGATAAAGTAGGAAGGAAGCTGCTACTCTTATGGAGCTTTTTTGGCATGGCGGTGTCAATGGGTGTTCAAGTTGCTGCAGCAAGCTTTAATTCATCAGGGTCTGGATCGCTGTACCTATCTGTTGGTGGAATGCTGATGTTCGTCTTAACATTTGCTCTAGGAGCTGGTCCAGTTCCTGGTCTCCTTTTACCAGAAATATTCCCCAGCCGTATTAGAGCAAAAGCAATGGCCGTCTGTATGTCGGTGTATTGGGTGATAAATTTCTTTGTGGGATTGCTGTTCTTGCAACTGCTGGAACAACTTGGTCCGCAGCTTCTGTATTCTATATTTGGCACCTTTTGCATGATGGCTGTGGTTTTCGTGAAGCGAAATGTGATCGAAACGAAAGGAAAATCGCTCCAAGAAATCGAGATAGCGCTCCTTCCACAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

492

Amino Acids

52.7

Weight (kDa)

8.38

Isoelectric Point (pI)

37.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 54 - 485 2.4e-97 Sugar (and other) transporter
MFS_1 PF07690 60 - 397 1.7e-20 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 358
AccB1I GGYRCC 2 cut(s) 305, 1373
AccB7I CCANNNNNTGG 1 cut(s) 1217
AciI CCGC 4 cut(s) 10, 221, 1091, 1349
AclWI GGATC 6 cut(s) 62, 75, 325, 775, 1024, 1153
AcoI YGGCCR 1 cut(s) 1269
AcsI RAATTY 3 cut(s) 597, 1006, 1300
AcyI GRCGYC 2 cut(s) 355, 859
AfaI GTAC 8 cut(s) 5, 102, 112, 162, 292, 535, 666, 1154
AfeI AGCGCT 1 cut(s) 1458
AfiI CCNNNNNNNGG 2 cut(s) 205, 1217
AflIII ACRYGT 1 cut(s) 772
AgsI TTSAA 5 cut(s) 129, 227, 253, 371, 1109
AjnI CCWGG 3 cut(s) 45, 567, 1216
Alw26I GTCTC 4 cut(s) 18, 551, 815, 1226
AlwI GGATC 6 cut(s) 62, 75, 325, 775, 1024, 1153
AlwNI CAGNNNCTG 4 cut(s) 830, 1142, 1217, 1357
Ama87I CYCGRG 1 cut(s) 203
Aor51HI AGCGCT 1 cut(s) 1458
AoxI GGCC 3 cut(s) 477, 976, 1269
ApeKI GCWGC 4 cut(s) 1060, 1115, 1118, 1351
ApoI RAATTY 3 cut(s) 597, 1006, 1300
Asp700I GAANNNNTTC 1 cut(s) 727
AspLEI GCGC 1 cut(s) 1459
AspS9I GGNCC 3 cut(s) 478, 1208, 1346
AsuHPI GGTGA 2 cut(s) 298, 1306
AsuII TTCGAA 1 cut(s) 32
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 2 cut(s) 1208, 1346
BamHI GGATCC 1 cut(s) 67
BanI GGYRCC 2 cut(s) 305, 1373
BanII GRGCYC 1 cut(s) 586
BbvI GCAGC 4 cut(s) 1047, 1102, 1130, 1363
BccI CCATC 6 cut(s) 58, 207, 327, 338, 1033, 1381
BceAI ACGGC 2 cut(s) 1233, 1256
BciT130I CCWGG 3 cut(s) 47, 569, 1218
BciVI GTATCC 1 cut(s) 43
BcoDI GTCTC 4 cut(s) 18, 551, 815, 1226
BfaI CTAG 1 cut(s) 1199
BfmI CTRYAG 2 cut(s) 660, 1116
BfoI RGCGCY 1 cut(s) 1460
BfuI GTATCC 1 cut(s) 43
BglII AGATCT 1 cut(s) 241
BisI GCNGC 4 cut(s) 1061, 1116, 1119, 1352
BlsI GCNGC 4 cut(s) 1062, 1117, 1120, 1353
BmcAI AGTACT 2 cut(s) 292, 666
Bme1390I CCNGG 3 cut(s) 47, 569, 1218
Bme18I GGWCC 2 cut(s) 1208, 1346
BmeT110I CYCGRG 1 cut(s) 203
BmgT120I GGNCC 3 cut(s) 478, 1208, 1346
BmiI GGNNCC 4 cut(s) 69, 307, 480, 1375
BmrFI CCNGG 3 cut(s) 47, 569, 1218
BmsI GCATC 2 cut(s) 422, 817
Bpu14I TTCGAA 1 cut(s) 32
Bsa29I ATCGAT 1 cut(s) 647
BsaHI GRCGYC 2 cut(s) 355, 859
BsaI GGTCTC 1 cut(s) 1226
BsaJI CCNNGG 7 cut(s) 264, 309, 568, 678, 760, 786, 942
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 1217
Bse1I ACTGG 4 cut(s) 469, 622, 672, 1211
Bse3DI GCAATG 3 cut(s) 380, 1035, 1272
BseBI CCWGG 3 cut(s) 47, 569, 1218
BseCI ATCGAT 1 cut(s) 647
BseDI CCNNGG 7 cut(s) 264, 309, 568, 678, 760, 786, 942
BseGI GGATG 2 cut(s) 338, 549
BseLI CCNNNNNNNGG 2 cut(s) 205, 1217
BseMI GCAATG 3 cut(s) 380, 1035, 1272
BseMII CTCAG 2 cut(s) 105, 723
BseNI ACTGG 4 cut(s) 469, 622, 672, 1211
BseRI GAGGAG 1 cut(s) 931
BseXI GCAGC 4 cut(s) 1047, 1102, 1130, 1363
BseYI CCCAGC 1 cut(s) 1244
BsgI GTGCAG 1 cut(s) 711
BshFI GGCC 3 cut(s) 479, 978, 1271
BshNI GGYRCC 2 cut(s) 305, 1373
BshVI ATCGAT 1 cut(s) 647
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 1 cut(s) 963
BslFI GGGAC 1 cut(s) 475
BslI CCNNNNNNNGG 2 cut(s) 205, 1217
BsmAI GTCTC 4 cut(s) 18, 551, 815, 1226
BsmFI GGGAC 1 cut(s) 475
BsmI GAATGC 2 cut(s) 182, 1176
BsnI GGCC 3 cut(s) 479, 978, 1271
Bso31I GGTCTC 1 cut(s) 1226
BsoBI CYCGRG 1 cut(s) 203
Bsp119I TTCGAA 1 cut(s) 32
Bsp1286I GDGCHC 1 cut(s) 586
Bsp1407I TGTACA 2 cut(s) 3, 100
Bsp143I GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
Bsp19I CCATGG 2 cut(s) 678, 786
BspACI CCGC 4 cut(s) 10, 221, 1091, 1349
BspANI GGCC 3 cut(s) 479, 978, 1271
BspCNI CTCAG 2 cut(s) 104, 724
BspDI ATCGAT 1 cut(s) 647
BspLI GGNNCC 4 cut(s) 69, 307, 480, 1375
BspMAI CTGCAG 1 cut(s) 1120
BspPI GGATC 6 cut(s) 62, 75, 325, 775, 1024, 1153
BspT104I TTCGAA 1 cut(s) 32
BspT107I GGYRCC 2 cut(s) 305, 1373
BspTNI GGTCTC 1 cut(s) 1226
BsrDI GCAATG 3 cut(s) 380, 1035, 1272
BsrGI TGTACA 2 cut(s) 3, 100
BsrI ACTGG 4 cut(s) 469, 622, 672, 1211
BssECI CCNNGG 7 cut(s) 264, 309, 568, 678, 760, 786, 942
BssMI GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
BssNI GRCGYC 2 cut(s) 355, 859
BssT1I CCWWGG 5 cut(s) 264, 309, 678, 760, 786
Bst2UI CCWGG 3 cut(s) 47, 569, 1218
Bst4CI ACNGT 3 cut(s) 115, 375, 1024
BstACI GRCGYC 2 cut(s) 355, 859
BstAPI GCANNNNNTGC 1 cut(s) 1380
BstAUI TGTACA 2 cut(s) 3, 100
BstBI TTCGAA 1 cut(s) 32
BstC8I GCNNGC 1 cut(s) 1123
BstDEI CTNAG 2 cut(s) 91, 732
BstDSI CCRYGG 2 cut(s) 678, 786
BstF5I GGATG 2 cut(s) 338, 549
BstH2I RGCGCY 1 cut(s) 1460
BstHHI GCGC 1 cut(s) 1459
BstKTI GATC 8 cut(s) 70, 149, 244, 320, 770, 1019, 1148, 1419
BstMAI GTCTC 4 cut(s) 18, 551, 815, 1226
BstMBI GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
BstMWI GCNNNNNNNGC 6 cut(s) 715, 797, 1083, 1202, 1324, 1380
BstNI CCWGG 3 cut(s) 47, 569, 1218
BstNSI RCATGY 2 cut(s) 567, 776
BstSCI CCNGG 3 cut(s) 45, 567, 1216
BstSFI CTRYAG 2 cut(s) 660, 1116
BstV1I GCAGC 4 cut(s) 1047, 1102, 1130, 1363
BstX2I RGATCY 4 cut(s) 67, 241, 317, 1016
BstXI CCANNNNNNTGG 1 cut(s) 46
BstYI RGATCY 4 cut(s) 67, 241, 317, 1016
Bsu15I ATCGAT 1 cut(s) 647
BsuI GTATCC 1 cut(s) 43
BsuRI GGCC 3 cut(s) 479, 978, 1271
BsuTUI ATCGAT 1 cut(s) 647
BtgI CCRYGG 2 cut(s) 678, 786
BtsCI GGATG 2 cut(s) 338, 549
BtsIMutI CAGTG 2 cut(s) 334, 615
Cac8I GCNNGC 1 cut(s) 1123
CaiI CAGNNNCTG 4 cut(s) 830, 1142, 1217, 1357
CfoI GCGC 1 cut(s) 1459
Cfr13I GGNCC 3 cut(s) 478, 1208, 1346
ClaI ATCGAT 1 cut(s) 647
CseI GACGC 1 cut(s) 867
Csp6I GTAC 8 cut(s) 4, 101, 111, 161, 291, 534, 665, 1153
CviAII CATG 9 cut(s) 79, 138, 158, 564, 679, 773, 787, 1087, 1384
CviQI GTAC 8 cut(s) 4, 101, 111, 161, 291, 534, 665, 1153
DdeI CTNAG 2 cut(s) 91, 732
DpnI GATC 8 cut(s) 69, 148, 243, 319, 769, 1018, 1147, 1418
DpnII GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
DraI TTTAAA 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 1269
Eco130I CCWWGG 5 cut(s) 264, 309, 678, 760, 786
Eco147I AGGCCT 1 cut(s) 978
Eco24I GRGCYC 1 cut(s) 586
Eco31I GGTCTC 1 cut(s) 1226
Eco47I GGWCC 2 cut(s) 1208, 1346
Eco47III AGCGCT 1 cut(s) 1458
Eco88I CYCGRG 1 cut(s) 203
EcoRI GAATTC 1 cut(s) 597
EcoRII CCWGG 3 cut(s) 45, 567, 1216
EcoT14I CCWWGG 5 cut(s) 264, 309, 678, 760, 786
EcoT38I GRGCYC 1 cut(s) 586
ErhI CCWWGG 5 cut(s) 264, 309, 678, 760, 786
FaeI CATG 9 cut(s) 82, 141, 161, 567, 682, 776, 790, 1090, 1387
FaqI GGGAC 1 cut(s) 475
FatI CATG 9 cut(s) 78, 137, 157, 563, 678, 772, 786, 1086, 1383
Fnu4HI GCNGC 4 cut(s) 1061, 1116, 1119, 1352
FokI GGATG 2 cut(s) 345, 536
FriOI GRGCYC 1 cut(s) 586
Fsp4HI GCNGC 4 cut(s) 1061, 1116, 1119, 1352
FspBI CTAG 1 cut(s) 1199
GlaI GCGC 1 cut(s) 1458
GluI GCNGC 4 cut(s) 1061, 1116, 1119, 1352
GsaI CCCAGC 1 cut(s) 1248
HaeII RGCGCY 1 cut(s) 1460
HaeIII GGCC 3 cut(s) 479, 978, 1271
HapII CCGG 1 cut(s) 963
HgaI GACGC 1 cut(s) 867
HhaI GCGC 1 cut(s) 1459
Hin1I GRCGYC 2 cut(s) 355, 859
Hin1II CATG 9 cut(s) 82, 141, 161, 567, 682, 776, 790, 1090, 1387
Hin6I GCGC 1 cut(s) 1457
HinP1I GCGC 1 cut(s) 1457
HincII GTYRAC 1 cut(s) 888
HindII GTYRAC 1 cut(s) 888
HindIII AAGCTT 1 cut(s) 1123
HinfI GANTC 2 cut(s) 697, 999
HpaII CCGG 1 cut(s) 963
HphI GGTGA 2 cut(s) 298, 1306
Hpy166II GTNNAC 2 cut(s) 701, 888
Hpy188I TCNGA 2 cut(s) 733, 844
Hpy188III TCNNGA 8 cut(s) 21, 74, 119, 553, 1014, 1143, 1402, 1450
Hpy8I GTNNAC 2 cut(s) 701, 888
Hpy99I CGWCG 1 cut(s) 360
HpyAV CCTTC 4 cut(s) 266, 441, 1047, 1472
HpyCH4III ACNGT 3 cut(s) 115, 375, 1024
HpyCH4IV ACGT 1 cut(s) 355
HpyF10VI GCNNNNNNNGC 6 cut(s) 715, 797, 1083, 1202, 1324, 1380
HpyF3I CTNAG 2 cut(s) 91, 732
HpySE526I ACGT 1 cut(s) 355
Hsp92I GRCGYC 2 cut(s) 355, 859
Hsp92II CATG 9 cut(s) 82, 141, 161, 567, 682, 776, 790, 1090, 1387
HspAI GCGC 1 cut(s) 1457
Kzo9I GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
LmnI GCTCC 5 cut(s) 762, 1074, 1202, 1443, 1464
Lsp1109I GCAGC 4 cut(s) 1047, 1102, 1130, 1363
LweI GCATC 2 cut(s) 422, 817
MaeI CTAG 1 cut(s) 1199
MaeII ACGT 1 cut(s) 355
MaeIII GTNAC 1 cut(s) 502
MalI GATC 8 cut(s) 69, 148, 243, 319, 769, 1018, 1147, 1418
MboI GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
MboII GAAGA 2 cut(s) 95, 735
MflI RGATCY 4 cut(s) 67, 241, 317, 1016
MhlI GDGCHC 1 cut(s) 586
MluCI AATT 7 cut(s) 393, 597, 651, 746, 1006, 1129, 1300
MlyI GAGTC 1 cut(s) 706
MmeI TCCRAC 3 cut(s) 295, 574, 786
MnlI CCTC 8 cut(s) 81, 145, 296, 492, 502, 522, 727, 952
MroXI GAANNNNTTC 1 cut(s) 727
MseI TTAA 5 cut(s) 213, 606, 954, 1128, 1187
MslI CAYNNNNRTG 1 cut(s) 1091
MspA1I CMGCKG 1 cut(s) 659
MspI CCGG 1 cut(s) 963
MspR9I CCNGG 3 cut(s) 47, 569, 1218
Mva1269I GAATGC 2 cut(s) 182, 1176
MvaI CCWGG 3 cut(s) 47, 569, 1218
MwoI GCNNNNNNNGC 6 cut(s) 715, 797, 1083, 1202, 1324, 1380
NcoI CCATGG 2 cut(s) 678, 786
NdeII GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
NlaIII CATG 9 cut(s) 82, 141, 161, 567, 682, 776, 790, 1090, 1387
NlaIV GGNNCC 4 cut(s) 69, 307, 480, 1375
NmeAIII GCCGAG 1 cut(s) 923
NmuCI GTSAC 1 cut(s) 502
NspI RCATGY 2 cut(s) 567, 776
NspV TTCGAA 1 cut(s) 32
PceI AGGCCT 1 cut(s) 978
PciI ACATGT 1 cut(s) 772
PctI GAATGC 2 cut(s) 182, 1176
PdmI GAANNNNTTC 1 cut(s) 727
PfeI GAWTC 1 cut(s) 999
PflMI CCANNNNNTGG 1 cut(s) 1217
PkrI GCNGC 4 cut(s) 1062, 1117, 1120, 1353
PleI GAGTC 1 cut(s) 705
PpsI GAGTC 1 cut(s) 705
PscI ACATGT 1 cut(s) 772
Psp6I CCWGG 3 cut(s) 45, 567, 1216
PspFI CCCAGC 1 cut(s) 1244
PspGI CCWGG 3 cut(s) 45, 567, 1216
PspN4I GGNNCC 4 cut(s) 69, 307, 480, 1375
PspPI GGNCC 3 cut(s) 478, 1208, 1346
PstI CTGCAG 1 cut(s) 1120
PstNI CAGNNNCTG 4 cut(s) 830, 1142, 1217, 1357
PsuI RGATCY 4 cut(s) 67, 241, 317, 1016
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 8 cut(s) 5, 102, 112, 162, 292, 535, 666, 1154
RsaNI GTAC 8 cut(s) 4, 101, 111, 161, 291, 534, 665, 1153
RseI CAYNNNNRTG 1 cut(s) 1091
SaqAI TTAA 5 cut(s) 213, 606, 954, 1128, 1187
SatI GCNGC 4 cut(s) 1061, 1116, 1119, 1352
Sau3AI GATC 8 cut(s) 67, 146, 241, 317, 767, 1016, 1145, 1416
Sau96I GGNCC 3 cut(s) 478, 1208, 1346
ScaI AGTACT 2 cut(s) 292, 666
SchI GAGTC 1 cut(s) 706
ScrFI CCNGG 3 cut(s) 47, 569, 1218
SduI GDGCHC 1 cut(s) 586
SfaNI GCATC 2 cut(s) 422, 817
SfcI CTRYAG 2 cut(s) 660, 1116
SfuI TTCGAA 1 cut(s) 32
SinI GGWCC 2 cut(s) 1208, 1346
SmiMI CAYNNNNRTG 1 cut(s) 1091
Sse9I AATT 7 cut(s) 393, 597, 651, 746, 1006, 1129, 1300
SseBI AGGCCT 1 cut(s) 978
SsiI CCGC 4 cut(s) 10, 221, 1091, 1349
SspI AATATT 1 cut(s) 1239
SspMI CTAG 1 cut(s) 1199
StuI AGGCCT 1 cut(s) 978
StyD4I CCNGG 3 cut(s) 45, 567, 1216
StyI CCWWGG 5 cut(s) 264, 309, 678, 760, 786
TaaI ACNGT 3 cut(s) 115, 375, 1024
TaiI ACGT 1 cut(s) 358
TaqI TCGA 5 cut(s) 20, 32, 647, 1419, 1449
TasI AATT 7 cut(s) 393, 597, 651, 746, 1006, 1129, 1300
TatI WGTACW 6 cut(s) 3, 100, 110, 160, 290, 664
TfiI GAWTC 1 cut(s) 999
Tru1I TTAA 5 cut(s) 213, 606, 954, 1128, 1187
Tru9I TTAA 5 cut(s) 213, 606, 954, 1128, 1187
TscAI CASTG 2 cut(s) 334, 622
TseFI GTSAC 1 cut(s) 502
TseI GCWGC 4 cut(s) 1060, 1115, 1118, 1351
Tsp45I GTSAC 1 cut(s) 502
TspDTI ATGAA 2 cut(s) 231, 1122
TspRI CASTG 2 cut(s) 334, 622
Van91I CCANNNNNTGG 1 cut(s) 1217
VpaK11BI GGWCC 2 cut(s) 1208, 1346
XapI RAATTY 3 cut(s) 597, 1006, 1300
XceI RCATGY 2 cut(s) 567, 776
XmnI GAANNNNTTC 1 cut(s) 727
XspI CTAG 1 cut(s) 1199
ZraI GACGTC 1 cut(s) 356
ZrmI AGTACT 2 cut(s) 292, 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.