AT1G68060

microtubule-associated proteins

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25510887 .. 25514601
3715 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68060.1

Sequence Viewer

Length: 1869 bp
ATGTCTGACGTTTCGGCTGACGGTGGTTTTTTGTCGGCGGAGCAAGCTACAACGCCTGTTGCGATTCCGACGCCGTATCCGTCATTGACGGTGTCGGCGTCCTATAAGGAGAAAAGTTCTGGGAGGAGGAGACCGGTTAGGCCTAGTTTTGATGCAGCTGCTGATAATGAGTTTATTACTTTGCTTCATGGTTCGGATCCAGTGAAAGTTGAGCTTAATCGGCTTGAGAATGAAGTTAGAGATAAGGATCGAGAATTAAGTGAAGCTAATGCTGAGATCAAAGCGTTGAGGTTATCTGAGAGACAAAGAGAGAAAGCTTGTGAAGAGCTTACTGATGAGCTAGCTAAGTTGGATGGGAAGCTCAAGTTAACTGAATCGCTTCTCCAAAGCAAAAATCTAGAAATCAAGAAGATCAATGAGGAGAAGAAGGCTTCCATGGCTGCTCAGTTTGCTGCTGAAGCTACCTTAAGAAGGGTCCATGCTGCTCAAAAGGATGATGATATGCCTCCGATTGAAGCCATTCTAGCTCCATTGGAAGCTGAGCTTAAGCTAGCTCGCTCTGAGATTGGGAAGCTTCAAGAAGATAACAGAGCTTTGGATCGTCTCACTAAATCAAAAGAAGCGGCTTTACTTGATGCTGAGAGGACTGTTGAAACTGCTCTGGCGAAAGCTGCTTTAGTTGATGATCTTCAGAATAAGAACCAAGAGTTGATGAAACAAATAGAAATCTGTCAGGAAGAAAACAAAATTCTAGACCGAATGCACAGGCAAAAGGTTGCGGAGGTGGAAAAGCTTACTCAGACTGTACGGGAACTGGAAGAGGCCGTTCTTGCTGGTGGTGCTGCTGCAAATGCCGTGAGGGATTACCAGCGGAAGTTTCAAGAGATGAACGAAGAACGAAAAACTCTTGACCGGGAACTTGCGCGTGCAAAGGTTACAGCAAACAGAGTTGCGACAGTGGTTGCAAATGAATGGAAAGATGGTAATGATAAAGTGATGCCTGTGAAGCAATGGCTTGAAGAAAGAAGGTTTCTACAGGGAGAAATGCAGCAACTCCGCGATAAGCTTGCCATATCAGATCGAGCTGCGAAATCTGAAGCACAGCTAAAAGACAAGTTTCAACTACGACTTAGAGTGCTTGAAGAGACACTGAGAGGCACATCAAGCATCAGCATAAGGAACACACCTGAGGGAAGAAGCATGAGTAATGGACCGTCTCGCAGGCAGTCAATCGGTGGATCAGATAATTTACAAAAGTTTGCGTCAAATGGCTTTTTGTCAAAGAAAACTCCGATGAGAAATTCCTTTACTTCTAATTCCACCTCGGTATTGAAGAATGCTAAAGGAACATCCAAGTCATTCGATGGAGGCACAAGATCATTGGATAGAGGCAAAGCACTCTTAAAAGGACCTGGGAATTATTCGTTCAACAAGGCTTGTGATGAAACCAAAGAATCAGAGTCACCTAATACCTGGAAAGAAGATTCAGAAGAGAAGCCACCAAGTGAACTCCCTGCACCAGCAACCGAAGACAATGTCCCAGGGGTTTTGTATGATTTACTACAGAAGGAAGTAGTCGCCTTGAGAAAATCTTCGCATGAAAAGGATCAAAGCCTCAAAGACAAGGATGATGCCATAGAGATGTTAGCAAAAAAGGTTGAAACTTTAACAAAGGCAATGGAAGTTGAAGCAAAGAAGATGAGAAGGGAAGTGGCTGCAATGGAGAAAGAGGTTGCTGCAATGCGTGTGGATAAAGATCAGGATAATAGAGCTAAAAGGTCTTCAAACACCAAACCCTCATCCAACACCGCCCAGATTCTTGCTGCAAGAGCTGCTGGCCGAAGTGGGTTAACAAGGAGTACACAATGA

Protein Analysis

622

Amino Acids

69.29

Weight (kDa)

8.68

Isoelectric Point (pI)

52.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP70 PF07058 56 - 606 4.9e-288 Microtubule-associated protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 925, 1059
AciI CCGC 6 cut(s) 38, 623, 779, 871, 1057, 1809
AclWI GGATC 6 cut(s) 191, 204, 255, 606, 1246, 1614
AcoI YGGCCR 1 cut(s) 1837
AcsI RAATTY 2 cut(s) 747, 1300
AcuI CTGAAG 3 cut(s) 477, 674, 1116
AcyI GRCGYC 2 cut(s) 71, 98
AdeI CACNNNGTG 1 cut(s) 1505
AfaI GTAC 2 cut(s) 807, 1861
AfiI CCNNNNNNNGG 1 cut(s) 471
AflII CTTAAG 2 cut(s) 466, 545
AgeI ACCGGT 1 cut(s) 133
AjnI CCWGG 3 cut(s) 1411, 1472, 1540
Alw26I GTCTC 5 cut(s) 124, 295, 608, 1139, 1221
AlwI GGATC 6 cut(s) 191, 204, 255, 606, 1246, 1614
AlwNI CAGNNNCTG 1 cut(s) 161
AoxI GGCC 3 cut(s) 140, 822, 1837
ApoI RAATTY 2 cut(s) 747, 1300
ArsI GACNNNNNNTTYG 2 cut(s) 1521, 1553
AsiGI ACCGGT 1 cut(s) 133
Asp700I GAANNNNTTC 3 cut(s) 378, 519, 1591
AspLEI GCGC 1 cut(s) 925
AspS9I GGNCC 3 cut(s) 475, 1211, 1409
AsuC2I CCSGG 1 cut(s) 914
AsuHPI GGTGA 1 cut(s) 1455
AsuNHI GCTAGC 2 cut(s) 340, 550
AvaII GGWCC 3 cut(s) 475, 1211, 1409
AxyI CCTNAGG 1 cut(s) 1188
BamHI GGATCC 1 cut(s) 196
BarI GAAGNNNNNNTAC 2 cut(s) 612, 644
BbsI GAAGAC 2 cut(s) 1536, 1773
BccI CCATC 3 cut(s) 347, 974, 1358
BceAI ACGGC 3 cut(s) 58, 809, 839
BcgI CGANNNNNNTGC 2 cut(s) 1049, 1083
BciT130I CCWGG 3 cut(s) 1413, 1474, 1542
BciVI GTATCC 1 cut(s) 87
BcnI CCSGG 1 cut(s) 914
BcoDI GTCTC 5 cut(s) 124, 295, 608, 1139, 1221
BfaI CTAG 6 cut(s) 144, 341, 398, 524, 551, 752
BfmI CTRYAG 2 cut(s) 1034, 1562
BfrI CTTAAG 2 cut(s) 466, 545
BfuI GTATCC 1 cut(s) 87
BlpI GCTNAGC 1 cut(s) 540
Bme1390I CCNGG 4 cut(s) 914, 1413, 1474, 1542
Bme18I GGWCC 3 cut(s) 475, 1211, 1409
BmgT120I GGNCC 3 cut(s) 475, 1211, 1409
BmiI GGNNCC 2 cut(s) 198, 476
BmrFI CCNGG 4 cut(s) 914, 1413, 1474, 1542
BmsI GCATC 5 cut(s) 142, 625, 987, 1176, 1621
BmtI GCTAGC 2 cut(s) 344, 554
BpiI GAAGAC 2 cut(s) 1536, 1773
Bpu1102I GCTNAGC 1 cut(s) 540
BpuEI CTTGAG 3 cut(s) 245, 347, 1603
BpuMI CCSGG 1 cut(s) 914
BsaBI GATNNNNATC 2 cut(s) 246, 1755
BsaHI GRCGYC 2 cut(s) 71, 98
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 5 cut(s) 435, 1323, 1412, 1540, 1541
BsaWI WCCGGW 1 cut(s) 133
Bsc4I CCNNNNNNNGG 1 cut(s) 471
Bse118I RCCGGY 1 cut(s) 133
Bse1I ACTGG 2 cut(s) 200, 819
Bse21I CCTNAGG 1 cut(s) 1188
Bse3DI GCAATG 4 cut(s) 1016, 1683, 1725, 1746
Bse8I GATNNNNATC 2 cut(s) 246, 1755
BseBI CCWGG 3 cut(s) 1413, 1474, 1542
BseDI CCNNGG 5 cut(s) 435, 1323, 1412, 1540, 1541
BseGI GGATG 5 cut(s) 358, 499, 1349, 1633, 1799
BseJI GATNNNNATC 2 cut(s) 246, 1755
BseLI CCNNNNNNNGG 1 cut(s) 471
BseMI GCAATG 4 cut(s) 1016, 1683, 1725, 1746
BseMII CTCAG 9 cut(s) 264, 288, 458, 531, 552, 630, 812, 1142, 1179
BseNI ACTGG 2 cut(s) 200, 819
BseRI GAGGAG 3 cut(s) 139, 142, 434
BsgI GTGCAG 1 cut(s) 1500
Bsh1236I CGCG 2 cut(s) 925, 1059
BshFI GGCC 3 cut(s) 142, 824, 1839
BshTI ACCGGT 1 cut(s) 133
BsiSI CCGG 2 cut(s) 134, 913
BslFI GGGAC 1 cut(s) 1523
BslI CCNNNNNNNGG 1 cut(s) 471
BsmAI GTCTC 5 cut(s) 124, 295, 608, 1139, 1221
BsmBI CGTCTC 2 cut(s) 608, 1221
BsmFI GGGAC 1 cut(s) 1523
BsmI GAATGC 2 cut(s) 765, 1342
BsnI GGCC 3 cut(s) 142, 824, 1839
Bso31I GGTCTC 1 cut(s) 124
Bsp1720I GCTNAGC 1 cut(s) 540
Bsp19I CCATGG 1 cut(s) 435
BspACI CCGC 6 cut(s) 38, 623, 779, 871, 1057, 1809
BspANI GGCC 3 cut(s) 142, 824, 1839
BspCNI CTCAG 9 cut(s) 265, 289, 457, 532, 553, 631, 811, 1143, 1180
BspFNI CGCG 2 cut(s) 925, 1059
BspLI GGNNCC 2 cut(s) 198, 476
BspOI GCTAGC 2 cut(s) 344, 554
BspPI GGATC 6 cut(s) 191, 204, 255, 606, 1246, 1614
BspQI GCTCTTC 1 cut(s) 318
BspTI CTTAAG 2 cut(s) 466, 545
BspTNI GGTCTC 1 cut(s) 124
BsrDI GCAATG 4 cut(s) 1016, 1683, 1725, 1746
BsrFI RCCGGY 1 cut(s) 133
BsrI ACTGG 2 cut(s) 200, 819
BssAI RCCGGY 1 cut(s) 133
BssECI CCNNGG 5 cut(s) 435, 1323, 1412, 1540, 1541
BssNI GRCGYC 2 cut(s) 71, 98
BssT1I CCWWGG 1 cut(s) 435
Bst2UI CCWGG 3 cut(s) 1413, 1474, 1542
Bst4CI ACNGT 6 cut(s) 23, 91, 649, 805, 958, 1215
Bst6I CTCTTC 4 cut(s) 318, 813, 1137, 1485
BstACI GRCGYC 2 cut(s) 71, 98
BstAFI CTTAAG 2 cut(s) 466, 545
BstAPI GCANNNNNTGC 1 cut(s) 1832
BstC8I GCNNGC 8 cut(s) 45, 342, 552, 556, 927, 1068, 1223, 1837
BstDSI CCRYGG 1 cut(s) 435
BstENI CCTNNNNNAGG 1 cut(s) 469
BstF5I GGATG 5 cut(s) 358, 499, 1349, 1633, 1799
BstFNI CGCG 2 cut(s) 925, 1059
BstHHI GCGC 1 cut(s) 925
BstMAI GTCTC 5 cut(s) 124, 295, 608, 1139, 1221
BstNI CCWGG 3 cut(s) 1413, 1474, 1542
BstSCI CCNGG 4 cut(s) 912, 1411, 1472, 1540
BstSFI CTRYAG 2 cut(s) 1034, 1562
BstUI CGCG 2 cut(s) 925, 1059
BstV2I GAAGAC 2 cut(s) 1536, 1773
BstX2I RGATCY 1 cut(s) 196
BstYI RGATCY 1 cut(s) 196
Bsu36I CCTNAGG 1 cut(s) 1188
BsuI GTATCC 1 cut(s) 87
BsuRI GGCC 3 cut(s) 142, 824, 1839
BtgI CCRYGG 1 cut(s) 435
BtsCI GGATG 5 cut(s) 358, 499, 1349, 1633, 1799
BtsIMutI CAGTG 3 cut(s) 207, 963, 1148
Cac8I GCNNGC 8 cut(s) 45, 342, 552, 556, 927, 1068, 1223, 1837
CaiI CAGNNNCTG 1 cut(s) 161
CfoI GCGC 1 cut(s) 925
Cfr10I RCCGGY 1 cut(s) 133
Cfr13I GGNCC 3 cut(s) 475, 1211, 1409
CseI GACGC 3 cut(s) 79, 87, 1251
Csp6I GTAC 2 cut(s) 806, 1860
CspAI ACCGGT 1 cut(s) 133
CspCI CAANNNNNGTGG 2 cut(s) 1728, 1763
CviAII CATG 5 cut(s) 188, 436, 479, 1201, 1598
CviQI GTAC 2 cut(s) 806, 1860
DraIII CACNNNGTG 1 cut(s) 1505
EaeI YGGCCR 1 cut(s) 1837
Eam1104I CTCTTC 4 cut(s) 318, 813, 1137, 1485
EarI CTCTTC 4 cut(s) 318, 813, 1137, 1485
EciI GGCGGA 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 435
Eco147I AGGCCT 1 cut(s) 142
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 3 cut(s) 475, 1211, 1409
Eco57I CTGAAG 3 cut(s) 477, 674, 1116
Eco81I CCTNAGG 1 cut(s) 1188
EcoNI CCTNNNNNAGG 1 cut(s) 469
EcoO109I RGGNCCY 1 cut(s) 1409
EcoRII CCWGG 3 cut(s) 1411, 1472, 1540
EcoT14I CCWWGG 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 435
Esp3I CGTCTC 2 cut(s) 608, 1221
FaeI CATG 5 cut(s) 191, 439, 482, 1204, 1601
FalI AAGNNNNNCTT 4 cut(s) 198, 230, 528, 560
FaqI GGGAC 1 cut(s) 1523
FatI CATG 5 cut(s) 187, 435, 478, 1200, 1597
FokI GGATG 5 cut(s) 365, 506, 1336, 1640, 1786
FspBI CTAG 6 cut(s) 144, 341, 398, 524, 551, 752
GlaI GCGC 1 cut(s) 924
HaeIII GGCC 3 cut(s) 142, 824, 1839
HapII CCGG 2 cut(s) 134, 913
HgaI GACGC 3 cut(s) 79, 87, 1251
HhaI GCGC 1 cut(s) 925
Hin1I GRCGYC 2 cut(s) 71, 98
Hin1II CATG 5 cut(s) 191, 439, 482, 1204, 1601
Hin6I GCGC 1 cut(s) 923
HinP1I GCGC 1 cut(s) 923
HincII GTYRAC 2 cut(s) 369, 1851
HindII GTYRAC 2 cut(s) 369, 1851
HindIII AAGCTT 4 cut(s) 315, 572, 791, 1064
HinfI GANTC 6 cut(s) 64, 374, 1454, 1460, 1484, 1816
HpaI GTTAAC 2 cut(s) 369, 1851
HpaII CCGG 2 cut(s) 134, 913
HphI GGTGA 1 cut(s) 1455
Hpy166II GTNNAC 4 cut(s) 369, 1508, 1851, 1862
Hpy188III TCNNGA 9 cut(s) 251, 398, 406, 578, 734, 752, 881, 908, 1760
Hpy8I GTNNAC 4 cut(s) 369, 1508, 1851, 1862
Hpy99I CGWCG 1 cut(s) 73
HpyAV CCTTC 5 cut(s) 421, 465, 1020, 1561, 1698
HpyCH4III ACNGT 6 cut(s) 23, 91, 649, 805, 958, 1215
HpyCH4IV ACGT 1 cut(s) 9
HpySE526I ACGT 1 cut(s) 9
Hsp92I GRCGYC 2 cut(s) 71, 98
Hsp92II CATG 5 cut(s) 191, 439, 482, 1204, 1601
HspAI GCGC 1 cut(s) 923
KspAI GTTAAC 2 cut(s) 369, 1851
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 2 cut(s) 40, 532
LweI GCATC 5 cut(s) 142, 625, 987, 1176, 1621
MaeI CTAG 6 cut(s) 144, 341, 398, 524, 551, 752
MaeII ACGT 1 cut(s) 9
MaeIII GTNAC 2 cut(s) 934, 1461
MflI RGATCY 1 cut(s) 196
MluCI AATT 6 cut(s) 254, 747, 1246, 1300, 1315, 1417
MlyI GAGTC 1 cut(s) 1469
MmeI TCCRAC 3 cut(s) 92, 330, 1827
MroXI GAANNNNTTC 3 cut(s) 378, 519, 1591
MseI TTAA 8 cut(s) 216, 257, 368, 467, 546, 1403, 1667, 1850
MslI CAYNNNNRTG 1 cut(s) 1640
MspA1I CMGCKG 2 cut(s) 158, 871
MspCI CTTAAG 2 cut(s) 466, 545
MspI CCGG 2 cut(s) 134, 913
MspR9I CCNGG 4 cut(s) 914, 1413, 1474, 1542
Mva1269I GAATGC 2 cut(s) 765, 1342
MvaI CCWGG 3 cut(s) 1413, 1474, 1542
MvnI CGCG 2 cut(s) 925, 1059
NciI CCSGG 1 cut(s) 914
NcoI CCATGG 1 cut(s) 435
NheI GCTAGC 2 cut(s) 340, 550
NlaIII CATG 5 cut(s) 191, 439, 482, 1204, 1601
NlaIV GGNNCC 2 cut(s) 198, 476
NmuCI GTSAC 1 cut(s) 1461
PasI CCCWGGG 1 cut(s) 1541
PceI AGGCCT 1 cut(s) 142
PciSI GCTCTTC 1 cut(s) 318
PcsI WCGNNNNNNNCGW 3 cut(s) 59, 77, 95
PctI GAATGC 2 cut(s) 765, 1342
PdmI GAANNNNTTC 3 cut(s) 378, 519, 1591
PfeI GAWTC 5 cut(s) 64, 374, 1454, 1484, 1816
PflFI GACNNNGTC 2 cut(s) 91, 1535
PinAI ACCGGT 1 cut(s) 133
PleI GAGTC 1 cut(s) 1468
PpsI GAGTC 1 cut(s) 1468
PpuMI RGGWCCY 1 cut(s) 1409
Psp5II RGGWCCY 1 cut(s) 1409
Psp6I CCWGG 3 cut(s) 1411, 1472, 1540
PspGI CCWGG 3 cut(s) 1411, 1472, 1540
PspN4I GGNNCC 2 cut(s) 198, 476
PspPI GGNCC 3 cut(s) 475, 1211, 1409
PspPPI RGGWCCY 1 cut(s) 1409
PstNI CAGNNNCTG 1 cut(s) 161
PsuI RGATCY 1 cut(s) 196
PsyI GACNNNGTC 2 cut(s) 91, 1535
PvuII CAGCTG 1 cut(s) 158
RsaI GTAC 2 cut(s) 807, 1861
RsaNI GTAC 2 cut(s) 806, 1860
RseI CAYNNNNRTG 1 cut(s) 1640
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 8 cut(s) 216, 257, 368, 467, 546, 1403, 1667, 1850
Sau96I GGNCC 3 cut(s) 475, 1211, 1409
SchI GAGTC 1 cut(s) 1469
ScrFI CCNGG 4 cut(s) 914, 1413, 1474, 1542
SfaNI GCATC 5 cut(s) 142, 625, 987, 1176, 1621
SfcI CTRYAG 2 cut(s) 1034, 1562
SinI GGWCC 3 cut(s) 475, 1211, 1409
SmiMI CAYNNNNRTG 1 cut(s) 1640
SmlI CTYRAG 5 cut(s) 224, 362, 466, 545, 1582
SmoI CTYRAG 5 cut(s) 224, 362, 466, 545, 1582
Sse9I AATT 6 cut(s) 254, 747, 1246, 1300, 1315, 1417
SseBI AGGCCT 1 cut(s) 142
SsiI CCGC 6 cut(s) 38, 623, 779, 871, 1057, 1809
SspMI CTAG 6 cut(s) 144, 341, 398, 524, 551, 752
StuI AGGCCT 1 cut(s) 142
StyD4I CCNGG 4 cut(s) 912, 1411, 1472, 1540
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 6 cut(s) 23, 91, 649, 805, 958, 1215
TaiI ACGT 1 cut(s) 12
TaqI TCGA 3 cut(s) 250, 1081, 1362
TaqII GACCGA 1 cut(s) 771
TasI AATT 6 cut(s) 254, 747, 1246, 1300, 1315, 1417
TatI WGTACW 1 cut(s) 1859
TauI GCSGC 1 cut(s) 626
TfiI GAWTC 5 cut(s) 64, 374, 1454, 1484, 1816
Tru1I TTAA 8 cut(s) 216, 257, 368, 467, 546, 1403, 1667, 1850
Tru9I TTAA 8 cut(s) 216, 257, 368, 467, 546, 1403, 1667, 1850
TscAI CASTG 3 cut(s) 207, 963, 1155
TseFI GTSAC 1 cut(s) 1461
Tsp45I GTSAC 1 cut(s) 1461
TspDTI ATGAA 7 cut(s) 176, 246, 728, 902, 984, 1458, 1614
TspGWI ACGGA 1 cut(s) 69
TspRI CASTG 3 cut(s) 207, 963, 1155
Tth111I GACNNNGTC 2 cut(s) 91, 1535
Vha464I CTTAAG 2 cut(s) 466, 545
VpaK11BI GGWCC 3 cut(s) 475, 1211, 1409
XagI CCTNNNNNAGG 1 cut(s) 469
XapI RAATTY 2 cut(s) 747, 1300
XbaI TCTAGA 2 cut(s) 397, 751
XmnI GAANNNNTTC 3 cut(s) 378, 519, 1591
XspI CTAG 6 cut(s) 144, 341, 398, 524, 551, 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.