Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0003156

Physical Location & Seq

Genomic Coordinates Forward (+)

55919069 .. 55925459

Gene Structure 6391 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG409500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGAGGAAGTTTCCGGCGACGGAGCCGCGTCGTCTCCGATGATGGAGTTCAGCGGCGGCAATGGACTGCCGCCGGGGTACAATCCGACGCCTCCGCCGCTCACGGTGTCGGGATCGTTCAAGGAGGGGAGGAGCTCGTCGCGGAGGAGAGCAATCAGGAGGCCGAGCATGGACGGCGACGAGTTCATTAATCTCCTGCACGGCTCGGATCCGGTCAAGGTGGAGCTCAATCGCCTCGAGAATGAAGTCAGAGATAAGGACCGAGAGTTGGGAGAGGCGCAGGCTCAGATCAAGGCTCTCAAGCTCTCTGAGAGAGCCAGGGAAAAGGCTGTTGAAGAGCTCACTGATGAACTGACGAAGGTGGACGAGAAGCTCAAGTTAACGGAATCTCTTCTAGAAAGCAAAAATCTTGAAATAAAGAAGATCAATGATGAGAAGAAAGCTTCTATGGCAGCTCAATTCGCAGCTGAAGCTACTCTACGTAGGGTTCATGCTGCTCAAAAAGATGATGATATGCCTCCAATTGAAGCCATTCTTGCACCTTTGGAGGCTGAGCTCAAGCTTGCTCGGCAAGAGATTGCAAAGCTTCAAGATGATAACAAAGCTTTGGATCGCCTTACCAAATCAAAAGAAGCAGCTTTACTTGAGGCTGAGAGGACTGTGGAGGTTGCCTTGGTTAAGGCCTCCATGGTGGATGACCTTCAAAATAAAAACCAAGAGTTGATGAAACAGATCGAAATTTGTCAGGAAGAAAACAAAATTTTAGATAGAATGCATAGACAAAAGGTTGCGGAGGTTGAAAAGCTTACGCAGACTGTGCGGGAGTTGGAAGAGGCAGTTCTTGCTGGTGGCGCTGCAGCCAATGCTGTCAGGGATTACCAGCGGAAGTTCCAGGAGATGAATGAGGAGAGGAAAACTCTAGACCGGGAGTTGGCTCGTGCAAAAGTCACAGCAAACAGAGTAGCCGTAGTGGTTGCAAATGAGTGGAAAGACGCTAACGACAAAGTGATGCCTGTAAAGCAATGGCTTGAAGAACGGAGATTCTTGCAGGGAGAAATGCAGCAACTTCGGGACAAGCTTGCCATAACTGAAAGAGCTGCCAAGTCAGAAGCTCAGTTGAAAGAAAAATATCATATGCGACTTAAAGTGCTTGAGGAGAGTGTGAGAGGATCTTCGAACAGTATTAGTCGAAGCACAGCAGAAGGAAGAAGTATAAGCAATGGACCCTCTCGACGTCAGTCTCTTGGTGGAGCGGATAGCATTCCTAAATTATCTTCCAATGGCTTTTTATCCAAGAGAACACCAGTCAGATCCTTGTCCTCCAGCACCAGTTCAGTCTTGAAGCATGCGAAAGGCACTTCAAAATCATTTGATGGCGGTACTAGATCACTGGACAGGGGTAAGGTTCTGAATGGTGCAAGCTCCAATTTCTCAGTCAACCAATCTTGTGAGGAAACCAAGGATGGGGAAGCACAAAATAACTGGAAAGGGAATTCTGATGATAAGCCAAATGAGTTCTCAACAGTGGATACAGAGGATAATGTCCCGGGGGTTTTGTATGATTTGCTACAGAAAGAGGTTGTAGCTTTGAGGAAAGCTGGCCATGAGAAAGATCAAAGCCTGAAAGACAAAGATGACGCTATTGAGATGTTAGCCAAGAAGGTAGACACCTTGACTAAAGCAATGGAGGTTGAGGCGAGGAAAATGAGAAGAGAAGTTGCCGCTATGGAGAAGGAGGTAGCTGCCATGCGTGTGGACAAAGAACACGACAATAGGGCCAAGCGGTTTGGTAGTGCCAAAACCTCTGCCAACAGTGCTCAAGTGCTTTCTGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0006996 GO:0007010 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0009832 GO:0009987 GO:0010005 GO:0010051 GO:0015630 GO:0015631 GO:0016043 GO:0030863 GO:0030981 GO:0032501 GO:0032502 GO:0042546 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048856 GO:0055028 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MAP70

Protein Analysis

612

Amino Acids

68.08

Weight (kDa)

7.66

Isoelectric Point (pI)

42.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAP70	PF07058	60 - 608	1e-295	Microtubule-associated protein 70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14840 AT1G14840 AT1G24764 AT1G24764 AT1G24764 AT1G68060 AT2G01750 AT2G01750
fragaria_vesca	FvH4_4g33511 FvH4_4g33511 FvH4_4g33511
malus_domestica	MD00G1075100.v1.1 MD12G1095700.v1.1 MD13G1020100.v1.1 MD16G1018200.v1.1
prunus_persica	Prupe.1G333700_v2.0.a1 Prupe.7G032400_v2.0.a1 Prupe.7G032700_v2.0.a1
pyrus_communis	pycom12g08260 pycom13g01700 pycom14g08120 pycom16g01650
rosa_chinensis	RchiOBHm_Chr3g0480111 RchiOBHm_Chr4g0443021
rosa_laevigata	RLG00000005962
rosa_multiflora	Rmu_sc0006604.1_g000002 Rmu_ssc0000204.1_g000001
rosa_roxburghii	Rroxscaffold_5G00383650
rosa_rugosa	Rorug04G0343800 Rorug04G0343800
rosa_samantha	Rh3AG231900 Rh3AG232000 Rh4AG398000 Rh4BG409500 Rh4CG425000 Rh4DG404300
rosa_wichuraiana	Rw4G034280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1237
AccBSI	CCGCTC	2 cut(s)	100, 1253
AccI	GTMKAC	1 cut(s)	1665
AccII	CGCG	2 cut(s)	29, 142
AclWI	GGATC	6 cut(s)	121, 203, 216, 618, 1177, 1305
AcoI	YGGCCR	1 cut(s)	1600
AcsI	RAATTY	3 cut(s)	738, 759, 1492
AcuI	CTGAAG	1 cut(s)	489
AcyI	GRCGYC	2 cut(s)	89, 1234
AfaI	GTAC	2 cut(s)	80, 1381
AfiI	CCNNNNNNNGG	3 cut(s)	268, 931, 1464
AjnI	CCWGG	2 cut(s)	317, 891
Alw21I	GWGCWC	5 cut(s)	137, 228, 342, 558, 1819
Alw26I	GTCTC	2 cut(s)	39, 1245
AlwI	GGATC	6 cut(s)	121, 203, 216, 618, 1177, 1305
Ama87I	CYCGRG	2 cut(s)	236, 1546
AoxI	GGCC	4 cut(s)	161, 681, 1600, 1776
ApeKI	GCWGC	9 cut(s)	452, 464, 494, 635, 854, 857, 1060, 1097, 1742
ApoI	RAATTY	3 cut(s)	738, 759, 1492
AseI	ATTAAT	1 cut(s)	189
Asp700I	GAANNNNTTC	2 cut(s)	390, 531
AspLEI	GCGC	2 cut(s)	280, 854
AspS9I	GGNCC	3 cut(s)	259, 1223, 1776
AsuC2I	CCSGG	4 cut(s)	75, 926, 1547, 1548
AsuII	TTCGAA	1 cut(s)	1175
AvaI	CYCGRG	2 cut(s)	236, 1546
AvaII	GGWCC	2 cut(s)	259, 1223
BalI	TGGCCA	1 cut(s)	1602
BamHI	GGATCC	1 cut(s)	208
BanII	GRGCYC	4 cut(s)	137, 228, 342, 558
BarI	GAAGNNNNNNTAC	4 cut(s)	462, 494, 624, 656
BauI	CACGAG	1 cut(s)	936
Bbv12I	GWGCWC	5 cut(s)	137, 228, 342, 558, 1819
BbvI	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1729
BccI	CCATC	3 cut(s)	37, 1367, 1457
BceAI	ACGGC	3 cut(s)	190, 217, 950
BcgI	CGANNNNNNTGC	2 cut(s)	1049, 1083
BciT130I	CCWGG	2 cut(s)	319, 893
BciVI	GTATCC	1 cut(s)	1522
BcnI	CCSGG	4 cut(s)	75, 926, 1547, 1548
BcoDI	GTCTC	2 cut(s)	39, 1245
BfaI	CTAG	3 cut(s)	395, 920, 1383
BfmI	CTRYAG	2 cut(s)	855, 1568
BfoI	RGCGCY	1 cut(s)	855
BfuI	GTATCC	1 cut(s)	1522
BlpI	GCTNAGC	1 cut(s)	552
Bme1390I	CCNGG	6 cut(s)	75, 319, 893, 926, 1547, 1548
Bme18I	GGWCC	2 cut(s)	259, 1223
BmeT110I	CYCGRG	2 cut(s)	236, 1546
BmgT120I	GGNCC	3 cut(s)	259, 1223, 1776
BmiI	GGNNCC	3 cut(s)	25, 210, 1225
BmrFI	CCNGG	6 cut(s)	75, 319, 893, 926, 1547, 1548
BmsI	GCATC	1 cut(s)	999
BoxI	GACNNNNGTC	1 cut(s)	1237
BplI	GAGNNNNNCTC	2 cut(s)	901, 933
BpmI	CTGGAG	1 cut(s)	1306
Bpu1102I	GCTNAGC	1 cut(s)	552
Bpu14I	TTCGAA	1 cut(s)	1175
BpuEI	CTTGAG	6 cut(s)	284, 359, 542, 665, 1172, 1803
BpuMI	CCSGG	4 cut(s)	75, 926, 1547, 1548
BsaAI	YACGTR	1 cut(s)	482
BsaHI	GRCGYC	2 cut(s)	89, 1234
BsaJI	CCNNGG	7 cut(s)	74, 318, 672, 687, 1458, 1546, 1547
BsaWI	WCCGGW	1 cut(s)	211
Bsc4I	CCNNNNNNNGG	3 cut(s)	268, 931, 1464
Bse1I	ACTGG	4 cut(s)	1304, 1329, 1395, 1487
Bse3DI	GCAATG	4 cut(s)	67, 1028, 1225, 1689
BseBI	CCWGG	2 cut(s)	319, 893
BseDI	CCNNGG	7 cut(s)	74, 318, 672, 687, 1458, 1546, 1547
BseGI	GGATG	2 cut(s)	700, 1468
BseLI	CCNNNNNNNGG	3 cut(s)	268, 931, 1464
BseMI	GCAATG	4 cut(s)	67, 1028, 1225, 1689
BseMII	CTCAG	6 cut(s)	299, 300, 543, 642, 1127, 1446
BseNI	ACTGG	4 cut(s)	1304, 1329, 1395, 1487
BseRI	GAGGAG	4 cut(s)	145, 160, 920, 1169
BseXI	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1729
BsgI	GTGCAG	1 cut(s)	182
Bsh1236I	CGCG	2 cut(s)	29, 142
BshFI	GGCC	4 cut(s)	163, 683, 1602, 1778
BsiHKAI	GWGCWC	5 cut(s)	137, 228, 342, 558, 1819
BsiHKCI	CYCGRG	2 cut(s)	236, 1546
BsiSI	CCGG	5 cut(s)	15, 74, 212, 925, 1547
BslFI	GGGAC	2 cut(s)	1085, 1529
BslI	CCNNNNNNNGG	3 cut(s)	268, 931, 1464
BsmAI	GTCTC	2 cut(s)	39, 1245
BsmBI	CGTCTC	1 cut(s)	39
BsmFI	GGGAC	2 cut(s)	1085, 1529
BsmI	GAATGC	2 cut(s)	777, 1260
BsnI	GGCC	4 cut(s)	163, 683, 1602, 1778
BsoBI	CYCGRG	2 cut(s)	236, 1546
Bsp119I	TTCGAA	1 cut(s)	1175
Bsp1286I	GDGCHC	5 cut(s)	137, 228, 342, 558, 1819
Bsp1720I	GCTNAGC	1 cut(s)	552
Bsp19I	CCATGG	1 cut(s)	687
BspANI	GGCC	4 cut(s)	163, 683, 1602, 1778
BspCNI	CTCAG	6 cut(s)	298, 301, 544, 643, 1126, 1445
BspFNI	CGCG	2 cut(s)	29, 142
BspLI	GGNNCC	3 cut(s)	25, 210, 1225
BspMAI	CTGCAG	1 cut(s)	859
BspPI	GGATC	6 cut(s)	121, 203, 216, 618, 1177, 1305
BspQI	GCTCTTC	1 cut(s)	330
BspT104I	TTCGAA	1 cut(s)	1175
BsrBI	CCGCTC	2 cut(s)	100, 1253
BsrDI	GCAATG	4 cut(s)	67, 1028, 1225, 1689
BsrI	ACTGG	4 cut(s)	1304, 1329, 1395, 1487
BssECI	CCNNGG	7 cut(s)	74, 318, 672, 687, 1458, 1546, 1547
BssNI	GRCGYC	2 cut(s)	89, 1234
BssSI	CACGAG	1 cut(s)	936
BssT1I	CCWWGG	3 cut(s)	672, 687, 1458
Bst2BI	CACGAG	1 cut(s)	936
Bst2UI	CCWGG	2 cut(s)	319, 893
Bst4CI	ACNGT	6 cut(s)	106, 661, 817, 1181, 1525, 1814
Bst6I	CTCTTC	4 cut(s)	330, 396, 825, 1705
BstACI	GRCGYC	2 cut(s)	89, 1234
BstAPI	GCANNNNNTGC	3 cut(s)	817, 842, 863
BstBAI	YACGTR	1 cut(s)	482
BstBI	TTCGAA	1 cut(s)	1175
BstC8I	GCNNGC	6 cut(s)	282, 564, 1080, 1347, 1420, 1600
BstDEI	CTNAG	6 cut(s)	285, 309, 552, 651, 1113, 1432
BstDSI	CCRYGG	1 cut(s)	687
BstF5I	GGATG	2 cut(s)	700, 1468
BstFNI	CGCG	2 cut(s)	29, 142
BstH2I	RGCGCY	1 cut(s)	855
BstHHI	GCGC	2 cut(s)	280, 854
BstMAI	GTCTC	2 cut(s)	39, 1245
BstNI	CCWGG	2 cut(s)	319, 893
BstNSI	RCATGY	1 cut(s)	1349
BstPAI	GACNNNNGTC	1 cut(s)	1237
BstSCI	CCNGG	6 cut(s)	73, 317, 891, 924, 1545, 1546
BstSFI	CTRYAG	2 cut(s)	855, 1568
BstSNI	TACGTA	1 cut(s)	482
BstUI	CGCG	2 cut(s)	29, 142
BstV1I	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1729
BstX2I	RGATCY	3 cut(s)	208, 1169, 1310
BstXI	CCANNNNNNTGG	1 cut(s)	1753
BstYI	RGATCY	3 cut(s)	208, 1169, 1310
BsuI	GTATCC	1 cut(s)	1522
BsuRI	GGCC	4 cut(s)	163, 683, 1602, 1778
BtgI	CCRYGG	1 cut(s)	687
BtsCI	GGATG	2 cut(s)	700, 1468
BtsIMutI	CAGTG	4 cut(s)	342, 1388, 1530, 1819
Cac8I	GCNNGC	6 cut(s)	282, 564, 1080, 1347, 1420, 1600
CfoI	GCGC	2 cut(s)	280, 854
Cfr13I	GGNCC	3 cut(s)	259, 1223, 1776
Cfr9I	CCCGGG	1 cut(s)	1546
CseI	GACGC	4 cut(s)	18, 97, 1001, 1646
Csp6I	GTAC	2 cut(s)	79, 1380
CviAII	CATG	6 cut(s)	169, 491, 688, 1346, 1604, 1747
CviQI	GTAC	2 cut(s)	79, 1380
DdeI	CTNAG	6 cut(s)	285, 309, 552, 651, 1113, 1432
EaeI	YGGCCR	1 cut(s)	1600
Eam1104I	CTCTTC	4 cut(s)	330, 396, 825, 1705
EarI	CTCTTC	4 cut(s)	330, 396, 825, 1705
EciI	GGCGGA	1 cut(s)	84
Ecl136II	GAGCTC	4 cut(s)	135, 226, 340, 556
Eco105I	TACGTA	1 cut(s)	482
Eco130I	CCWWGG	3 cut(s)	672, 687, 1458
Eco147I	AGGCCT	1 cut(s)	683
Eco24I	GRGCYC	4 cut(s)	137, 228, 342, 558
Eco47I	GGWCC	2 cut(s)	259, 1223
Eco53kI	GAGCTC	4 cut(s)	135, 226, 340, 556
Eco57I	CTGAAG	1 cut(s)	489
Eco88I	CYCGRG	2 cut(s)	236, 1546
EcoICRI	GAGCTC	4 cut(s)	135, 226, 340, 556
EcoRI	GAATTC	1 cut(s)	1492
EcoRII	CCWGG	2 cut(s)	317, 891
EcoT14I	CCWWGG	3 cut(s)	672, 687, 1458
EcoT22I	ATGCAT	1 cut(s)	777
EcoT38I	GRGCYC	4 cut(s)	137, 228, 342, 558
ErhI	CCWWGG	3 cut(s)	672, 687, 1458
Esp3I	CGTCTC	1 cut(s)	39
FaeI	CATG	6 cut(s)	172, 494, 691, 1349, 1607, 1750
FalI	AAGNNNNNCTT	2 cut(s)	519, 551
FaqI	GGGAC	2 cut(s)	1085, 1529
FatI	CATG	6 cut(s)	168, 490, 687, 1345, 1603, 1746
FauI	CCCGC	1 cut(s)	813
FauNDI	CATATG	1 cut(s)	1134
FblI	GTMKAC	1 cut(s)	1665
FokI	GGATG	2 cut(s)	707, 1475
FriOI	GRGCYC	4 cut(s)	137, 228, 342, 558
FspBI	CTAG	3 cut(s)	395, 920, 1383
GlaI	GCGC	2 cut(s)	279, 853
GsuI	CTGGAG	1 cut(s)	1306
HaeII	RGCGCY	1 cut(s)	855
HaeIII	GGCC	4 cut(s)	163, 683, 1602, 1778
HapII	CCGG	5 cut(s)	15, 74, 212, 925, 1547
HgaI	GACGC	4 cut(s)	18, 97, 1001, 1646
HhaI	GCGC	2 cut(s)	280, 854
Hin1I	GRCGYC	2 cut(s)	89, 1234
Hin1II	CATG	6 cut(s)	172, 494, 691, 1349, 1607, 1750
Hin6I	GCGC	2 cut(s)	278, 852
HinP1I	GCGC	2 cut(s)	278, 852
HincII	GTYRAC	2 cut(s)	381, 1438
HindII	GTYRAC	2 cut(s)	381, 1438
HindIII	AAGCTT	6 cut(s)	441, 560, 584, 603, 803, 1076
HinfI	GANTC	2 cut(s)	386, 1041
HpaI	GTTAAC	1 cut(s)	381
HpaII	CCGG	5 cut(s)	15, 74, 212, 925, 1547
Hpy166II	GTNNAC	5 cut(s)	364, 381, 1438, 1666, 1756
Hpy8I	GTNNAC	5 cut(s)	364, 381, 1438, 1666, 1756
Hpy99I	CGWCG	6 cut(s)	23, 34, 91, 142, 182, 1236
HpyAV	CCTTC	6 cut(s)	352, 710, 1196, 1654, 1726, 1827
HpyCH4III	ACNGT	6 cut(s)	106, 661, 817, 1181, 1525, 1814
HpyCH4IV	ACGT	2 cut(s)	481, 1234
HpyF3I	CTNAG	6 cut(s)	285, 309, 552, 651, 1113, 1432
HpySE526I	ACGT	2 cut(s)	481, 1234
Hsp92I	GRCGYC	2 cut(s)	89, 1234
Hsp92II	CATG	6 cut(s)	172, 494, 691, 1349, 1607, 1750
HspAI	GCGC	2 cut(s)	278, 852
KspAI	GTTAAC	1 cut(s)	381
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	5 cut(s)	23, 132, 223, 1250, 1427
Lsp1109I	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1729
LweI	GCATC	1 cut(s)	999
MaeI	CTAG	3 cut(s)	395, 920, 1383
MaeII	ACGT	2 cut(s)	481, 1234
MaeIII	GTNAC	1 cut(s)	946
MbiI	CCGCTC	2 cut(s)	100, 1253
MfeI	CAATTG	1 cut(s)	522
MflI	RGATCY	3 cut(s)	208, 1169, 1310
MhlI	GDGCHC	5 cut(s)	137, 228, 342, 558, 1819
MlsI	TGGCCA	1 cut(s)	1602
MluCI	AATT	7 cut(s)	458, 522, 738, 759, 1268, 1426, 1492
MluNI	TGGCCA	1 cut(s)	1602
MmeI	TCCRAC	2 cut(s)	110, 807
Mox20I	TGGCCA	1 cut(s)	1602
Mph1103I	ATGCAT	1 cut(s)	777
MroXI	GAANNNNTTC	2 cut(s)	390, 531
MscI	TGGCCA	1 cut(s)	1602
MseI	TTAA	4 cut(s)	189, 380, 678, 1143
MslI	CAYNNNNRTG	1 cut(s)	1751
Msp20I	TGGCCA	1 cut(s)	1602
MspA1I	CMGCKG	3 cut(s)	54, 467, 883
MspI	CCGG	5 cut(s)	15, 74, 212, 925, 1547
MspR9I	CCNGG	6 cut(s)	75, 319, 893, 926, 1547, 1548
MunI	CAATTG	1 cut(s)	522
Mva1269I	GAATGC	2 cut(s)	777, 1260
MvaI	CCWGG	2 cut(s)	319, 893
MvnI	CGCG	2 cut(s)	29, 142
NciI	CCSGG	4 cut(s)	75, 926, 1547, 1548
NcoI	CCATGG	1 cut(s)	687
NdeI	CATATG	1 cut(s)	1134
NlaIII	CATG	6 cut(s)	172, 494, 691, 1349, 1607, 1750
NlaIV	GGNNCC	3 cut(s)	25, 210, 1225
NmeAIII	GCCGAG	2 cut(s)	189, 547
NmuCI	GTSAC	1 cut(s)	946
NsiI	ATGCAT	1 cut(s)	777
NspI	RCATGY	1 cut(s)	1349
NspV	TTCGAA	1 cut(s)	1175
PaeI	GCATGC	1 cut(s)	1349
PaeR7I	CTCGAG	1 cut(s)	236
PceI	AGGCCT	1 cut(s)	683
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	2 cut(s)	777, 1260
PdmI	GAANNNNTTC	2 cut(s)	390, 531
PfeI	GAWTC	2 cut(s)	386, 1041
PfoI	TCCNGGA	1 cut(s)	891
Ppu21I	YACGTR	1 cut(s)	482
PshAI	GACNNNNGTC	1 cut(s)	1237
PshBI	ATTAAT	1 cut(s)	189
Psp124BI	GAGCTC	4 cut(s)	137, 228, 342, 558
Psp6I	CCWGG	2 cut(s)	317, 891
PspGI	CCWGG	2 cut(s)	317, 891
PspN4I	GGNNCC	3 cut(s)	25, 210, 1225
PspPI	GGNCC	3 cut(s)	259, 1223, 1776
PstI	CTGCAG	1 cut(s)	859
PsuI	RGATCY	3 cut(s)	208, 1169, 1310
PvuII	CAGCTG	1 cut(s)	467
RsaI	GTAC	2 cut(s)	80, 1381
RsaNI	GTAC	2 cut(s)	79, 1380
RseI	CAYNNNNRTG	1 cut(s)	1751
SacI	GAGCTC	4 cut(s)	137, 228, 342, 558
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	4 cut(s)	189, 380, 678, 1143
Sau96I	GGNCC	3 cut(s)	259, 1223, 1776
ScrFI	CCNGG	6 cut(s)	75, 319, 893, 926, 1547, 1548
SduI	GDGCHC	5 cut(s)	137, 228, 342, 558, 1819
SfaNI	GCATC	1 cut(s)	999
SfcI	CTRYAG	2 cut(s)	855, 1568
Sfr274I	CTCGAG	1 cut(s)	236
SfuI	TTCGAA	1 cut(s)	1175
SinI	GGWCC	2 cut(s)	259, 1223
SlaI	CTCGAG	1 cut(s)	236
SmaI	CCCGGG	1 cut(s)	1548
SmiMI	CAYNNNNRTG	1 cut(s)	1751
SmlI	CTYRAG	7 cut(s)	236, 299, 374, 557, 644, 1151, 1818
SmoI	CTYRAG	7 cut(s)	236, 299, 374, 557, 644, 1151, 1818
SnaBI	TACGTA	1 cut(s)	482
SphI	GCATGC	1 cut(s)	1349
Sse9I	AATT	7 cut(s)	458, 522, 738, 759, 1268, 1426, 1492
SseBI	AGGCCT	1 cut(s)	683
SspMI	CTAG	3 cut(s)	395, 920, 1383
SstI	GAGCTC	4 cut(s)	137, 228, 342, 558
StuI	AGGCCT	1 cut(s)	683
StyD4I	CCNGG	6 cut(s)	73, 317, 891, 924, 1545, 1546
StyI	CCWWGG	3 cut(s)	672, 687, 1458
TaaI	ACNGT	6 cut(s)	106, 661, 817, 1181, 1525, 1814
TaiI	ACGT	2 cut(s)	484, 1237
TaqI	TCGA	5 cut(s)	237, 735, 1175, 1189, 1231
TaqII	GACCGA	1 cut(s)	276
TasI	AATT	7 cut(s)	458, 522, 738, 759, 1268, 1426, 1492
TauI	GCSGC	6 cut(s)	29, 57, 60, 73, 100, 1724
TfiI	GAWTC	2 cut(s)	386, 1041
Tru1I	TTAA	4 cut(s)	189, 380, 678, 1143
Tru9I	TTAA	4 cut(s)	189, 380, 678, 1143
TscAI	CASTG	4 cut(s)	349, 1395, 1530, 1819
TseFI	GTSAC	1 cut(s)	946
TseI	GCWGC	9 cut(s)	452, 464, 494, 635, 854, 857, 1060, 1097, 1742
Tsp45I	GTSAC	1 cut(s)	946
TspDTI	ATGAA	6 cut(s)	175, 258, 363, 479, 740, 914
TspGWI	ACGGA	3 cut(s)	36, 398, 1051
TspMI	CCCGGG	1 cut(s)	1546
TspRI	CASTG	4 cut(s)	349, 1395, 1530, 1819
VpaK11BI	GGWCC	2 cut(s)	259, 1223
VspI	ATTAAT	1 cut(s)	189
XapI	RAATTY	3 cut(s)	738, 759, 1492
XbaI	TCTAGA	2 cut(s)	394, 919
XceI	RCATGY	1 cut(s)	1349
XhoI	CTCGAG	1 cut(s)	236
XmaI	CCCGGG	1 cut(s)	1546
XmiI	GTMKAC	1 cut(s)	1665
XmnI	GAANNNNTTC	2 cut(s)	390, 531
XspI	CTAG	3 cut(s)	395, 920, 1383
ZraI	GACGTC	1 cut(s)	1235
Zsp2I	ATGCAT	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.