pycom13g01700

Microtubule-associated protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
1127437 .. 1129705
2269 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g01700.4

Sequence Viewer

Length: 1440 bp
ATGAGAAGAAAGCTTCCATGGCTGCTCAGTTCGCAGCTGAAGCTACTCTACGGAGGGTTCATGCTGCGCAAAAGGATGATGATATGCCTCCTATTGAAGCCATTCTTGCACCTCTGGAGGCTGAGCTCAAGCTTGCCCGGCAAGAGATTGCAAAGCTTCAAGATGATAACAAAGCTTTGGATCGCCTTACCAAATCAAAAGAAGCAGCTTTACTTGAGGCTGAGAGGACTGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATCGATCTTCAGAATAAAAACCAAGAGTTGATGAAACAGATAGAAATTTGTCAGGAAGAAAATAAAATTTTAGACAAGATGCATAGACAAAAGGTTGCTGAGGTTGAAAAGCTTACACAGACCGTGCGGGAGTTGGAAGAGGCTGTTCTTGCTGGTGGTGCAGCGGCAAATGCTGTGAGGGATTATCAGCGGAAGTTTCAGGAGATGAATGAGGAAAGGAAAACTCTAGACCGGGAGTTGGCCCGTGCAAAAGTAACAGCAAACAGAGTAGCTGTAGTGGTAGCAAATGAGTGGAAAGATGCTAATGACAAAGTGATGCCTGTAAAACAATGGCTTGAAGAACGGAGATTCTTGCAGGGAGAAATGCAACAACTTCGTGACAAGCTTGCCATAACTGAGCGAGCTGCCAAGTCTGAAGCTCAGTTGAAAGAAAAATATCACATGCGACTTAAGGTGCTTGAGGAGAGTGTGAGAGGTAACAGTATTAATCGCAGCACAGTAGAGGGAAGAAGTACAAGCAATGGGCCCTCTCGACGTCAGTCCCTGGGTGGAGCTGATAATGCTCCAAAATTAAGCTCCAATGGCTTTTCATCCAAGAGAACTCCCGTCAGGTCTTTGTCCTCCAGCACCAGTTCAGTGTTAAAGCATGCTAAAGGCACGTCAAAATCATTTGATGGTGGTACAAGATCATTGGACAGGGGTAAGGTTCCCTTGAATGGTACAAGCCCCAGTTTCTCCGTCAACCAATCTTGTGAGGGAACAAAGGATGGTGAAACACAAACTAACTGGAAGGGAAATTCAGATGATAAGCCTGAGTTCTCCACAGTGGATAGGGAGGATAGTGTCCCAGGGGTTTTGTATGATTTGTTGCAGAAAGAGGTTGTAGCGTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGCCTGAAAGACAAGGACGATGCTATTGAGATGTTAGCCAAGAAGGTAGATACCTTGACTAAAGCAATGGAGGTTGAAGCAAAGAAAATGAGAAGAGAAGTTGCTTCCATGGAGAAGGAGGTAGCTGCCATGCGTGTGGACAAAGAACATGAGAATAGGGCCAAGCGGTTTGGTAATACCAAAAGTTCTGTCAGCAGTGCTCAGGTTCTCTCTGGAAGGGGTCTCGCGCGAAGTGGGTTAACCCGCAGCACCCAATGA

Protein Analysis

480

Amino Acids

54.49

Weight (kDa)

10.03

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 802
Acc16I TGCGCA 1 cut(s) 68
AccII CGCG 2 cut(s) 1409, 1411
AciI CCGC 5 cut(s) 391, 428, 454, 1348, 1426
AclWI GGATC 2 cut(s) 188, 272
AcsI RAATTY 3 cut(s) 309, 330, 1060
AcuI CTGAAG 3 cut(s) 59, 257, 699
AcyI GRCGYC 1 cut(s) 799
AfaI GTAC 3 cut(s) 778, 946, 985
AfiI CCNNNNNNNGG 2 cut(s) 502, 980
AflII CTTAAG 1 cut(s) 713
AgsI TTSAA 7 cut(s) 97, 160, 371, 602, 691, 979, 1259
AjiI CACGTC 1 cut(s) 924
AjnI CCWGG 2 cut(s) 807, 1111
Alw21I GWGCWC 2 cut(s) 128, 1384
Alw26I GTCTC 1 cut(s) 1409
AlwI GGATC 2 cut(s) 188, 272
AlwNI CAGNNNCTG 1 cut(s) 808
AoxI GGCC 4 cut(s) 251, 504, 788, 1341
ApaI GGGCCC 1 cut(s) 792
ApeKI GCWGC 9 cut(s) 22, 34, 64, 205, 425, 668, 756, 1307, 1428
ApoI RAATTY 3 cut(s) 309, 330, 1060
ArsI GACNNNNNNTTYG 2 cut(s) 1356, 1388
AseI ATTAAT 1 cut(s) 750
Asp700I GAANNNNTTC 1 cut(s) 101
AspLEI GCGC 2 cut(s) 69, 1411
AspS9I GGNCC 4 cut(s) 505, 788, 789, 1341
AsuC2I CCSGG 2 cut(s) 138, 497
AsuHPI GGTGA 1 cut(s) 1046
BaeGI GKGCMC 1 cut(s) 792
BanII GRGCYC 2 cut(s) 128, 792
BarI GAAGNNNNNNTAC 4 cut(s) 32, 64, 194, 226
Bbv12I GWGCWC 2 cut(s) 128, 1384
BbvCI CCTCAGC 1 cut(s) 363
BbvI GCAGC 8 cut(s) 9, 46, 51, 217, 437, 655, 768, 1294
BccI CCATC 2 cut(s) 932, 1025
BcgI CGANNNNNNTGC 2 cut(s) 620, 654
BciT130I CCWGG 2 cut(s) 809, 1113
BcnI CCSGG 2 cut(s) 138, 497
BcoDI GTCTC 1 cut(s) 1409
BfaI CTAG 1 cut(s) 491
BfmI CTRYAG 1 cut(s) 537
BfrI CTTAAG 1 cut(s) 713
BlpI GCTNAGC 1 cut(s) 122
Bme1390I CCNGG 4 cut(s) 138, 497, 809, 1113
BmgBI CACGTC 1 cut(s) 924
BmgT120I GGNCC 4 cut(s) 505, 788, 789, 1341
BmiI GGNNCC 2 cut(s) 790, 972
BmrFI CCNGG 4 cut(s) 138, 497, 809, 1113
BmrI ACTGGG 1 cut(s) 987
BmsI GCATC 4 cut(s) 333, 553, 570, 1192
BmuI ACTGGG 1 cut(s) 987
BoxI GACNNNNGTC 1 cut(s) 802
BpmI CTGGAG 2 cut(s) 136, 871
Bpu10I CCTNAGC 3 cut(s) 248, 363, 1383
Bpu1102I GCTNAGC 1 cut(s) 122
BpuEI CTTGAG 3 cut(s) 112, 235, 743
BpuMI CCSGG 2 cut(s) 138, 497
Bsa29I ATCGAT 1 cut(s) 267
BsaHI GRCGYC 1 cut(s) 799
BsaI GGTCTC 1 cut(s) 1409
BsaJI CCNNGG 8 cut(s) 17, 242, 257, 807, 808, 1111, 1112, 1290
Bsc4I CCNNNNNNNGG 2 cut(s) 502, 980
Bse1I ACTGG 3 cut(s) 894, 993, 1055
Bse3DI GCAATG 2 cut(s) 790, 1254
BseBI CCWGG 2 cut(s) 809, 1113
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 8 cut(s) 17, 242, 257, 807, 808, 1111, 1112, 1290
BseGI GGATG 3 cut(s) 81, 854, 1036
BseLI CCNNNNNNNGG 2 cut(s) 502, 980
BseMI GCAATG 2 cut(s) 790, 1254
BseMII CTCAG 8 cut(s) 40, 113, 212, 354, 651, 698, 1068, 1397
BseNI ACTGG 3 cut(s) 894, 993, 1055
BseRI GAGGAG 1 cut(s) 740
BseSI GKGCMC 1 cut(s) 792
BseXI GCAGC 8 cut(s) 9, 46, 51, 217, 437, 655, 768, 1294
BsgI GTGCAG 1 cut(s) 444
Bsh1236I CGCG 2 cut(s) 1409, 1411
BshFI GGCC 4 cut(s) 253, 506, 790, 1343
BshVI ATCGAT 1 cut(s) 267
BsiHKAI GWGCWC 2 cut(s) 128, 1384
BsiSI CCGG 2 cut(s) 138, 496
BslFI GGGAC 2 cut(s) 790, 1094
BslI CCNNNNNNNGG 2 cut(s) 502, 980
BsmAI GTCTC 1 cut(s) 1409
BsmFI GGGAC 2 cut(s) 790, 1094
BsnI GGCC 4 cut(s) 253, 506, 790, 1343
Bso31I GGTCTC 1 cut(s) 1409
Bsp120I GGGCCC 1 cut(s) 788
Bsp1286I GDGCHC 3 cut(s) 128, 792, 1384
Bsp143I GATC 5 cut(s) 180, 264, 268, 950, 1177
Bsp1720I GCTNAGC 1 cut(s) 122
Bsp19I CCATGG 3 cut(s) 17, 257, 1290
BspACI CCGC 5 cut(s) 391, 428, 454, 1348, 1426
BspANI GGCC 4 cut(s) 253, 506, 790, 1343
BspCNI CTCAG 8 cut(s) 39, 114, 213, 355, 652, 697, 1069, 1396
BspDI ATCGAT 1 cut(s) 267
BspFNI CGCG 2 cut(s) 1409, 1411
BspHI TCATGA 1 cut(s) 1168
BspLI GGNNCC 2 cut(s) 790, 972
BspPI GGATC 2 cut(s) 188, 272
BspTI CTTAAG 1 cut(s) 713
BspTNI GGTCTC 1 cut(s) 1409
BsrDI GCAATG 2 cut(s) 790, 1254
BsrI ACTGG 3 cut(s) 894, 993, 1055
BssECI CCNNGG 8 cut(s) 17, 242, 257, 807, 808, 1111, 1112, 1290
BssMI GATC 5 cut(s) 180, 264, 268, 950, 1177
BssNI GRCGYC 1 cut(s) 799
BssT1I CCWWGG 4 cut(s) 17, 242, 257, 1290
Bst2UI CCWGG 2 cut(s) 809, 1113
Bst4CI ACNGT 5 cut(s) 231, 388, 746, 763, 1090
Bst6I CTCTTC 2 cut(s) 396, 1270
BstACI GRCGYC 1 cut(s) 799
BstAFI CTTAAG 1 cut(s) 713
BstC8I GCNNGC 4 cut(s) 134, 651, 666, 912
BstDEI CTNAG 9 cut(s) 26, 122, 221, 248, 363, 660, 684, 1077, 1383
BstDSI CCRYGG 3 cut(s) 17, 257, 1290
BstF5I GGATG 3 cut(s) 81, 854, 1036
BstFNI CGCG 2 cut(s) 1409, 1411
BstHHI GCGC 2 cut(s) 69, 1411
BstKTI GATC 5 cut(s) 183, 267, 271, 953, 1180
BstMAI GTCTC 1 cut(s) 1409
BstMBI GATC 5 cut(s) 180, 264, 268, 950, 1177
BstNI CCWGG 2 cut(s) 809, 1113
BstNSI RCATGY 2 cut(s) 709, 914
BstPAI GACNNNNGTC 1 cut(s) 802
BstSCI CCNGG 4 cut(s) 136, 495, 807, 1111
BstSFI CTRYAG 1 cut(s) 537
BstSLI GKGCMC 1 cut(s) 792
BstUI CGCG 2 cut(s) 1409, 1411
BstV1I GCAGC 8 cut(s) 9, 46, 51, 217, 437, 655, 768, 1294
BstXI CCANNNNNNTGG 1 cut(s) 1318
Bsu15I ATCGAT 1 cut(s) 267
BsuRI GGCC 4 cut(s) 253, 506, 790, 1343
BsuTUI ATCGAT 1 cut(s) 267
BtgI CCRYGG 3 cut(s) 17, 257, 1290
BtrI CACGTC 1 cut(s) 924
BtsCI GGATG 3 cut(s) 81, 854, 1036
BtsI GCAGTG 1 cut(s) 1384
BtsIMutI CAGTG 3 cut(s) 906, 1095, 1384
Cac8I GCNNGC 4 cut(s) 134, 651, 666, 912
CaiI CAGNNNCTG 1 cut(s) 808
CciI TCATGA 1 cut(s) 1168
CfoI GCGC 2 cut(s) 69, 1411
Cfr13I GGNCC 4 cut(s) 505, 788, 789, 1341
ClaI ATCGAT 1 cut(s) 267
Csp6I GTAC 3 cut(s) 777, 945, 984
CviAII CATG 9 cut(s) 18, 61, 258, 706, 911, 1169, 1291, 1312, 1331
CviQI GTAC 3 cut(s) 777, 945, 984
DdeI CTNAG 9 cut(s) 26, 122, 221, 248, 363, 660, 684, 1077, 1383
DpnI GATC 5 cut(s) 182, 266, 270, 952, 1179
DpnII GATC 5 cut(s) 180, 264, 268, 950, 1177
Eam1104I CTCTTC 2 cut(s) 396, 1270
EarI CTCTTC 2 cut(s) 396, 1270
Ecl136II GAGCTC 1 cut(s) 126
Eco130I CCWWGG 4 cut(s) 17, 242, 257, 1290
Eco147I AGGCCT 1 cut(s) 253
Eco24I GRGCYC 2 cut(s) 128, 792
Eco31I GGTCTC 1 cut(s) 1409
Eco53kI GAGCTC 1 cut(s) 126
Eco57I CTGAAG 3 cut(s) 59, 257, 699
EcoICRI GAGCTC 1 cut(s) 126
EcoO109I RGGNCCY 1 cut(s) 789
EcoRII CCWGG 2 cut(s) 807, 1111
EcoT14I CCWWGG 4 cut(s) 17, 242, 257, 1290
EcoT22I ATGCAT 1 cut(s) 348
EcoT38I GRGCYC 2 cut(s) 128, 792
ErhI CCWWGG 4 cut(s) 17, 242, 257, 1290
FaeI CATG 9 cut(s) 21, 64, 261, 709, 914, 1172, 1294, 1315, 1334
FalI AAGNNNNNCTT 4 cut(s) 89, 121, 959, 991
FaqI GGGAC 2 cut(s) 790, 1094
FatI CATG 9 cut(s) 17, 60, 257, 705, 910, 1168, 1290, 1311, 1330
FauI CCCGC 2 cut(s) 384, 1433
FokI GGATG 3 cut(s) 88, 841, 1043
FriOI GRGCYC 2 cut(s) 128, 792
FspBI CTAG 1 cut(s) 491
FspI TGCGCA 1 cut(s) 68
GlaI GCGC 2 cut(s) 68, 1410
GsuI CTGGAG 2 cut(s) 136, 871
HaeIII GGCC 4 cut(s) 253, 506, 790, 1343
HapII CCGG 2 cut(s) 138, 496
HhaI GCGC 2 cut(s) 69, 1411
Hin1I GRCGYC 1 cut(s) 799
Hin1II CATG 9 cut(s) 21, 64, 261, 709, 914, 1172, 1294, 1315, 1334
Hin6I GCGC 2 cut(s) 67, 1409
HinP1I GCGC 2 cut(s) 67, 1409
HincII GTYRAC 2 cut(s) 1006, 1422
HindII GTYRAC 2 cut(s) 1006, 1422
HindIII AAGCTT 6 cut(s) 11, 130, 154, 173, 374, 647
HinfI GANTC 1 cut(s) 612
HpaI GTTAAC 1 cut(s) 1422
HpaII CCGG 2 cut(s) 138, 496
HphI GGTGA 1 cut(s) 1046
Hpy166II GTNNAC 3 cut(s) 1006, 1321, 1422
Hpy188I TCNGA 3 cut(s) 276, 679, 1066
Hpy188III TCNNGA 9 cut(s) 115, 160, 317, 464, 491, 641, 795, 1169, 1395
Hpy8I GTNNAC 3 cut(s) 1006, 1321, 1422
Hpy99I CGWCG 1 cut(s) 801
HpyAV CCTTC 4 cut(s) 1048, 1219, 1291, 1392
HpyCH4III ACNGT 5 cut(s) 231, 388, 746, 763, 1090
HpyCH4IV ACGT 2 cut(s) 799, 923
HpyCH4V TGCA 8 cut(s) 109, 151, 346, 425, 512, 619, 631, 1135
HpyF3I CTNAG 9 cut(s) 26, 122, 221, 248, 363, 660, 684, 1077, 1383
HpySE526I ACGT 2 cut(s) 799, 923
Hsp92I GRCGYC 1 cut(s) 799
Hsp92II CATG 9 cut(s) 21, 64, 261, 709, 914, 1172, 1294, 1315, 1334
HspAI GCGC 2 cut(s) 67, 1409
KspAI GTTAAC 1 cut(s) 1422
Kzo9I GATC 5 cut(s) 180, 264, 268, 950, 1177
LmnI GCTCC 3 cut(s) 815, 832, 845
Lsp1109I GCAGC 8 cut(s) 9, 46, 51, 217, 437, 655, 768, 1294
LweI GCATC 4 cut(s) 333, 553, 570, 1192
MaeI CTAG 1 cut(s) 491
MaeII ACGT 2 cut(s) 799, 923
MaeIII GTNAC 3 cut(s) 517, 641, 740
MalI GATC 5 cut(s) 182, 266, 270, 952, 1179
MboI GATC 5 cut(s) 180, 264, 268, 950, 1177
MboII GAAGA 7 cut(s) 18, 263, 332, 413, 614, 783, 1287
MhlI GDGCHC 3 cut(s) 128, 792, 1384
MluCI AATT 4 cut(s) 309, 330, 833, 1060
MmeI TCCRAC 1 cut(s) 378
Mph1103I ATGCAT 1 cut(s) 348
MroXI GAANNNNTTC 1 cut(s) 101
MseI TTAA 5 cut(s) 714, 750, 836, 905, 1421
MslI CAYNNNNRTG 1 cut(s) 1316
MspA1I CMGCKG 3 cut(s) 37, 428, 454
MspCI CTTAAG 1 cut(s) 713
MspI CCGG 2 cut(s) 138, 496
MspR9I CCNGG 4 cut(s) 138, 497, 809, 1113
MvaI CCWGG 2 cut(s) 809, 1113
MvnI CGCG 2 cut(s) 1409, 1411
NciI CCSGG 2 cut(s) 138, 497
NcoI CCATGG 3 cut(s) 17, 257, 1290
NdeII GATC 5 cut(s) 180, 264, 268, 950, 1177
NlaIII CATG 9 cut(s) 21, 64, 261, 709, 914, 1172, 1294, 1315, 1334
NlaIV GGNNCC 2 cut(s) 790, 972
NmuCI GTSAC 1 cut(s) 641
NsbI TGCGCA 1 cut(s) 68
NsiI ATGCAT 1 cut(s) 348
NspI RCATGY 2 cut(s) 709, 914
PaeI GCATGC 1 cut(s) 914
PagI TCATGA 1 cut(s) 1168
PasI CCCWGGG 2 cut(s) 808, 1112
PceI AGGCCT 1 cut(s) 253
PdmI GAANNNNTTC 1 cut(s) 101
PfeI GAWTC 1 cut(s) 612
PshAI GACNNNNGTC 1 cut(s) 802
PshBI ATTAAT 1 cut(s) 750
Psp124BI GAGCTC 1 cut(s) 128
Psp6I CCWGG 2 cut(s) 807, 1111
PspGI CCWGG 2 cut(s) 807, 1111
PspN4I GGNNCC 2 cut(s) 790, 972
PspOMI GGGCCC 1 cut(s) 788
PspPI GGNCC 4 cut(s) 505, 788, 789, 1341
PstNI CAGNNNCTG 1 cut(s) 808
PvuII CAGCTG 1 cut(s) 37
RsaI GTAC 3 cut(s) 778, 946, 985
RsaNI GTAC 3 cut(s) 777, 945, 984
RseI CAYNNNNRTG 1 cut(s) 1316
SacI GAGCTC 1 cut(s) 128
SaqAI TTAA 5 cut(s) 714, 750, 836, 905, 1421
Sau3AI GATC 5 cut(s) 180, 264, 268, 950, 1177
Sau96I GGNCC 4 cut(s) 505, 788, 789, 1341
ScrFI CCNGG 4 cut(s) 138, 497, 809, 1113
SduI GDGCHC 3 cut(s) 128, 792, 1384
SfaNI GCATC 4 cut(s) 333, 553, 570, 1192
SfcI CTRYAG 1 cut(s) 537
SmiMI CAYNNNNRTG 1 cut(s) 1316
SmlI CTYRAG 4 cut(s) 127, 214, 713, 722
SmoI CTYRAG 4 cut(s) 127, 214, 713, 722
SphI GCATGC 1 cut(s) 914
Sse9I AATT 4 cut(s) 309, 330, 833, 1060
SseBI AGGCCT 1 cut(s) 253
SsiI CCGC 5 cut(s) 391, 428, 454, 1348, 1426
SspMI CTAG 1 cut(s) 491
SstI GAGCTC 1 cut(s) 128
StuI AGGCCT 1 cut(s) 253
StyD4I CCNGG 4 cut(s) 136, 495, 807, 1111
StyI CCWWGG 4 cut(s) 17, 242, 257, 1290
TaaI ACNGT 5 cut(s) 231, 388, 746, 763, 1090
TaiI ACGT 2 cut(s) 802, 926
TaqI TCGA 2 cut(s) 267, 796
TasI AATT 4 cut(s) 309, 330, 833, 1060
TatI WGTACW 1 cut(s) 776
TauI GCSGC 1 cut(s) 431
TfiI GAWTC 1 cut(s) 612
Tru1I TTAA 5 cut(s) 714, 750, 836, 905, 1421
Tru9I TTAA 5 cut(s) 714, 750, 836, 905, 1421
TscAI CASTG 3 cut(s) 906, 1095, 1384
TseFI GTSAC 1 cut(s) 641
TseI GCWGC 9 cut(s) 22, 34, 64, 205, 425, 668, 756, 1307, 1428
Tsp45I GTSAC 1 cut(s) 641
TspDTI ATGAA 4 cut(s) 49, 311, 485, 843
TspGWI ACGGA 3 cut(s) 66, 622, 991
TspRI CASTG 3 cut(s) 906, 1095, 1384
Vha464I CTTAAG 1 cut(s) 713
VspI ATTAAT 1 cut(s) 750
XapI RAATTY 3 cut(s) 309, 330, 1060
XbaI TCTAGA 1 cut(s) 490
XceI RCATGY 2 cut(s) 709, 914
XmnI GAANNNNTTC 1 cut(s) 101
XspI CTAG 1 cut(s) 491
ZraI GACGTC 1 cut(s) 800
Zsp2I ATGCAT 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.