AT2G01750

microtubule-associated

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
328025 .. 332872
4848 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G01750.1

Sequence Viewer

Length: 1890 bp
ATGGAGGAAGGTGGATATGCGTTTGAGGTTAACAATGGAAGACCAACGGCGAGTGAGTTTGGTACGACGGCGAGGATTTCGTCACCGTCATTGACTATGTCATCGTCTTTCCGTGAAGGAGGAGGAGGAGGTGGAAGTAAGGGTTTAACACGACGGAGGTCAATGAAGCCGAGTTTTGACGCCGATAATGAGTTCATTACTTTACTCCATGGCTCAGATCCGGTTAAAGTTGAGCTTAATAGGCTTGAGAACGATGTCAGAGATAAAGATCGGGAGTTGTCTGAATCCCAAGCTGAGATCAAAGCATTGAGGTTGTCTGAACGGCAAAGAGAGAAGGCTGTTGAAGAGCTTACTGAAGAGTTGGGAAAGATGTCGGAGAAGCTCAAACTAACTGAAAACCTTCTTGACAGTAAAAACCTTGAAATCAAGAAAATAAACGAAGAAAAAAGGGCTTCAATGGCAGCTCAATTTGCTGCAGAAGCCACTCTTCGAAGGGTTCATGCTGCTCAAAAGGATGACGATATGCCTCCTATTGAAGCTATTCTCGCTCCTTTAGAGGCTGAACTCAAGTTGGCGAGACATGAAATTGTTAAACTTCAAGATGACAACAGAGCATTGGACCGTCTAACCAAGTCGAAGGAAGCAGCTTTGCTTGATGCTGAAAGAACTGTTCAGTCTGCTCTTGCAAAGGCTTCAATGGTTGATGACCTCCAGAATAAAAACCAAGAGCTAATGAAACAGATAGAAATTTGTCAGGAAGAGAACAGAATTTTGGACAAGTTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGACCGTACGGGAGCTTGAAGAAGCTGTTCTTGCTGGTGGTACAGCTGCAAATGCAGTGAGAGATTACCAGAGGAAATTTCAAGAAATGAATGAAGAGAGGAGAATCCTTGATCGGGAACTGGCTCGTGCCAAAGTAAGTGCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGATGGTAGCGATAAAGTGATGCCTGTGAAGCAATGGCTCGAAGAACGAAGATTTCTGCAGGGAGAAATGCAACAACTACGTGACAAACTTGCCATAGCTGATCGAGCTGCAAAATCTGAAGCTCAGCTAAAGGAGAAATTTCAACTGCGGCTTAGAGTCTTAGAAGAGAGTTTAAGAGGGCCTTCAAGCAGTGGAAACCGATCGACACCTGAGGGAAGAAGTATGAGCAACGGGCCTTCTCGAAGACAATCCCTTGGCGGAGCTGATATTATTCCGAAACTGACATCAAATGGATTTTTCTCCAAGAGGTCACCAAGTTCTCAGTTTAGATCTTTGAATGCTAGTACAAGCACAATATTGAAGCATGCGAAAGGAACATCCAGATCATTTGACGGAGGCAGTAGATCTTTAGATAGGAGTAAAGTACTAACAAACGAACCCAGATCGAAGTTTCCATTGAACCAATCTTCTGAAGGAACAAGCGGAGGCGGGTCACCTAATTCAACAAAACAAGGAGATTCAGAGAAAGCAGCAGGGACAAATAATGATAGTGTCCCAGGAGTATTACATGATTTGCTTCAAAAGGAGGTGATAACTTTAAGGAAAGCTGCTAATGATAAAGATCAAAGCCTTAGAGATAAAGACGAAGCTATTGAGATGTTGGCCAAGAAGGTTGAAACACTAACAAAGGCGATGGAAGTGGAAGCAAAGAAGATGCGAAGAGAAGTAGCAGCAATGGAGAAAGAGGTTTCAGCTATGCGTGTGGATAACAAAGGATCAGATAGTAGAACGAGACGTCACTCTACTAACTCAAAAGGAGCTTCAACAACTGCACAGTTACTTTCTGGAAGAGGCTCAGGACGAATGGGGATGACGAGGAGCACGCAGTGA

Protein Analysis

629

Amino Acids

69.77

Weight (kDa)

9.36

Isoelectric Point (pI)

58.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP70 PF07058 63 - 612 2.6e-289 Microtubule-associated protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1798
AciI CCGC 4 cut(s) 1147, 1257, 1482, 1488
AclWI GGATC 2 cut(s) 212, 1783
AcoI YGGCCR 1 cut(s) 1662
AcsI RAATTY 4 cut(s) 747, 768, 896, 1136
AcuI CTGAAG 3 cut(s) 375, 1137, 1491
AcyI GRCGYC 2 cut(s) 180, 1795
AdeI CACNNNGTG 1 cut(s) 1887
AfaI GTAC 5 cut(s) 64, 828, 862, 1345, 1425
AfiI CCNNNNNNNGG 1 cut(s) 934
AjnI CCWGG 1 cut(s) 1555
AjuI GAANNNNNNNTTGG 2 cut(s) 755, 787
Alw21I GWGCWC 1 cut(s) 1883
Alw26I GTCTC 2 cut(s) 571, 1786
AlwI GGATC 2 cut(s) 212, 1783
AoxI GGCC 3 cut(s) 1178, 1232, 1662
ApeKI GCWGC 9 cut(s) 461, 473, 503, 644, 866, 1106, 1529, 1607, 1730
ApoI RAATTY 4 cut(s) 747, 768, 896, 1136
Asp700I GAANNNNTTC 3 cut(s) 399, 540, 846
AspS9I GGNCC 3 cut(s) 619, 1178, 1232
AsuHPI GGTGA 4 cut(s) 75, 1302, 1485, 1600
AsuII TTCGAA 1 cut(s) 490
AvaII GGWCC 1 cut(s) 619
AxyI CCTNAGG 1 cut(s) 1209
BalI TGGCCA 1 cut(s) 1664
BauI CACGAG 1 cut(s) 945
BbsI GAAGAC 2 cut(s) 46, 1249
Bbv12I GWGCWC 1 cut(s) 1883
BbvI GCAGC 9 cut(s) 460, 473, 490, 656, 853, 1093, 1541, 1594, 1742
BccI CCATC 2 cut(s) 995, 1687
BceAI ACGGC 3 cut(s) 63, 84, 338
BciT130I CCWGG 1 cut(s) 1557
BcoDI GTCTC 2 cut(s) 571, 1786
BfaI CTAG 1 cut(s) 1341
BfmI CTRYAG 3 cut(s) 474, 978, 1055
BglII AGATCT 2 cut(s) 1328, 1403
BlpI GCTNAGC 1 cut(s) 1122
BmcAI AGTACT 1 cut(s) 1425
Bme1390I CCNGG 1 cut(s) 1557
Bme18I GGWCC 1 cut(s) 619
BmgT120I GGNCC 3 cut(s) 619, 1178, 1232
BmrFI CCNGG 1 cut(s) 1557
BmsI GCATC 3 cut(s) 646, 1008, 1704
BoxI GACNNNNGTC 1 cut(s) 157
BpiI GAAGAC 2 cut(s) 46, 1249
BpmI CTGGAG 1 cut(s) 695
Bpu10I CCTNAGC 1 cut(s) 1855
Bpu1102I GCTNAGC 1 cut(s) 1122
Bpu14I TTCGAA 1 cut(s) 490
BpuEI CTTGAG 2 cut(s) 266, 551
BsaAI YACGTR 1 cut(s) 1079
BsaBI GATNNNNATC 2 cut(s) 267, 1620
BsaHI GRCGYC 2 cut(s) 180, 1795
BsaJI CCNNGG 3 cut(s) 208, 1252, 1555
BsaWI WCCGGW 1 cut(s) 220
Bsc4I CCNNNNNNNGG 1 cut(s) 934
Bse1I ACTGG 1 cut(s) 945
Bse21I CCTNAGG 1 cut(s) 1209
Bse3DI GCAATG 2 cut(s) 1037, 1740
Bse8I GATNNNNATC 2 cut(s) 267, 1620
BseBI CCWGG 1 cut(s) 1557
BseDI CCNNGG 3 cut(s) 208, 1252, 1555
BseGI GGATG 3 cut(s) 520, 1376, 1875
BseJI GATNNNNATC 2 cut(s) 267, 1620
BseLI CCNNNNNNNGG 1 cut(s) 934
BseMI GCAATG 2 cut(s) 1037, 1740
BseMII CTCAG 6 cut(s) 228, 285, 1136, 1200, 1334, 1869
BseNI ACTGG 1 cut(s) 945
BseRI GAGGAG 4 cut(s) 135, 138, 141, 934
BseXI GCAGC 9 cut(s) 460, 473, 490, 656, 853, 1093, 1541, 1594, 1742
BsgI GTGCAG 1 cut(s) 1815
Bsh1285I CGRYCG 1 cut(s) 1202
BshFI GGCC 3 cut(s) 1180, 1234, 1664
BsiEI CGRYCG 1 cut(s) 1202
BsiHKAI GWGCWC 1 cut(s) 1883
BsiSI CCGG 1 cut(s) 221
BsiWI CGTACG 1 cut(s) 826
BslFI GGGAC 2 cut(s) 1538, 1549
BslI CCNNNNNNNGG 1 cut(s) 934
BsmAI GTCTC 2 cut(s) 571, 1786
BsmBI CGTCTC 1 cut(s) 1786
BsmFI GGGAC 2 cut(s) 1538, 1549
BsmI GAATGC 1 cut(s) 1342
BsnI GGCC 3 cut(s) 1180, 1234, 1664
Bsp119I TTCGAA 1 cut(s) 490
Bsp1286I GDGCHC 1 cut(s) 1883
Bsp1720I GCTNAGC 1 cut(s) 1122
Bsp19I CCATGG 1 cut(s) 208
BspACI CCGC 4 cut(s) 1147, 1257, 1482, 1488
BspANI GGCC 3 cut(s) 1180, 1234, 1664
BspCNI CTCAG 6 cut(s) 227, 286, 1135, 1201, 1333, 1868
BspMAI CTGCAG 2 cut(s) 478, 1059
BspPI GGATC 2 cut(s) 212, 1783
BspQI GCTCTTC 1 cut(s) 339
BspT104I TTCGAA 1 cut(s) 490
BsrDI GCAATG 2 cut(s) 1037, 1740
BsrI ACTGG 1 cut(s) 945
BssECI CCNNGG 3 cut(s) 208, 1252, 1555
BssNI GRCGYC 2 cut(s) 180, 1795
BssSI CACGAG 1 cut(s) 945
BssT1I CCWWGG 2 cut(s) 208, 1252
Bst2BI CACGAG 1 cut(s) 945
Bst2UI CCWGG 1 cut(s) 1557
Bst4CI ACNGT 7 cut(s) 87, 410, 623, 670, 826, 979, 1836
Bst6I CTCTTC 8 cut(s) 339, 351, 492, 753, 909, 1158, 1714, 1843
BstACI GRCGYC 2 cut(s) 180, 1795
BstBAI YACGTR 1 cut(s) 1079
BstBI TTCGAA 1 cut(s) 490
BstC8I GCNNGC 3 cut(s) 964, 1365, 1883
BstDEI CTNAG 9 cut(s) 214, 294, 1122, 1151, 1159, 1209, 1320, 1631, 1855
BstDSI CCRYGG 1 cut(s) 208
BstEII GGTNACC 2 cut(s) 1308, 1491
BstF5I GGATG 3 cut(s) 520, 1376, 1875
BstMAI GTCTC 2 cut(s) 571, 1786
BstMCI CGRYCG 1 cut(s) 1202
BstMWI GCNNNNNNNGC 9 cut(s) 241, 458, 470, 479, 545, 851, 872, 1027, 1103
BstNI CCWGG 1 cut(s) 1557
BstNSI RCATGY 1 cut(s) 1367
BstPAI GACNNNNGTC 1 cut(s) 157
BstPI GGTNACC 2 cut(s) 1308, 1491
BstSCI CCNGG 1 cut(s) 1555
BstSFI CTRYAG 3 cut(s) 474, 978, 1055
BstV1I GCAGC 9 cut(s) 460, 473, 490, 656, 853, 1093, 1541, 1594, 1742
BstV2I GAAGAC 2 cut(s) 46, 1249
BstX2I RGATCY 3 cut(s) 217, 1328, 1403
BstYI RGATCY 3 cut(s) 217, 1328, 1403
Bsu36I CCTNAGG 1 cut(s) 1209
BsuRI GGCC 3 cut(s) 1180, 1234, 1664
BtgI CCRYGG 1 cut(s) 208
BtgZI GCGATG 1 cut(s) 1706
BtsCI GGATG 3 cut(s) 520, 1376, 1875
BtsI GCAGTG 2 cut(s) 882, 1195
BtsIMutI CAGTG 2 cut(s) 882, 1195
Cac8I GCNNGC 3 cut(s) 964, 1365, 1883
Cfr13I GGNCC 3 cut(s) 619, 1178, 1232
CseI GACGC 1 cut(s) 188
Csp6I GTAC 5 cut(s) 63, 827, 861, 1344, 1424
CspCI CAANNNNNGTGG 2 cut(s) 963, 998
CviAII CATG 5 cut(s) 209, 500, 581, 1364, 1568
CviQI GTAC 5 cut(s) 63, 827, 861, 1344, 1424
DdeI CTNAG 9 cut(s) 214, 294, 1122, 1151, 1159, 1209, 1320, 1631, 1855
DraIII CACNNNGTG 1 cut(s) 1887
EaeI YGGCCR 1 cut(s) 1662
Eam1104I CTCTTC 8 cut(s) 339, 351, 492, 753, 909, 1158, 1714, 1843
EarI CTCTTC 8 cut(s) 339, 351, 492, 753, 909, 1158, 1714, 1843
EciI GGCGGA 1 cut(s) 1272
Eco130I CCWWGG 2 cut(s) 208, 1252
Eco47I GGWCC 1 cut(s) 619
Eco57I CTGAAG 3 cut(s) 375, 1137, 1491
Eco81I CCTNAGG 1 cut(s) 1209
Eco91I GGTNACC 2 cut(s) 1308, 1491
EcoO109I RGGNCCY 1 cut(s) 1178
EcoO65I GGTNACC 2 cut(s) 1308, 1491
EcoRII CCWGG 1 cut(s) 1555
EcoT14I CCWWGG 2 cut(s) 208, 1252
ErhI CCWWGG 2 cut(s) 208, 1252
Esp3I CGTCTC 1 cut(s) 1786
FaeI CATG 5 cut(s) 212, 503, 584, 1367, 1571
FalI AAGNNNNNCTT 8 cut(s) 219, 251, 471, 503, 834, 866, 1165, 1197
FaqI GGGAC 2 cut(s) 1538, 1549
FatI CATG 5 cut(s) 208, 499, 580, 1363, 1567
FauI CCCGC 1 cut(s) 1481
FokI GGATG 3 cut(s) 527, 1363, 1882
FspBI CTAG 1 cut(s) 1341
GsuI CTGGAG 1 cut(s) 695
HaeIII GGCC 3 cut(s) 1180, 1234, 1664
HapII CCGG 1 cut(s) 221
HgaI GACGC 1 cut(s) 188
Hin1I GRCGYC 2 cut(s) 180, 1795
Hin1II CATG 5 cut(s) 212, 503, 584, 1367, 1571
HincII GTYRAC 1 cut(s) 31
HindII GTYRAC 1 cut(s) 31
HinfI GANTC 4 cut(s) 284, 924, 1155, 1517
HpaI GTTAAC 1 cut(s) 31
HpaII CCGG 1 cut(s) 221
HphI GGTGA 4 cut(s) 75, 1302, 1485, 1600
Hpy166II GTNNAC 2 cut(s) 31, 816
Hpy8I GTNNAC 2 cut(s) 31, 816
Hpy99I CGWCG 2 cut(s) 70, 156
HpyAV CCTTC 9 cut(s) 110, 328, 410, 486, 631, 1191, 1245, 1466, 1663
HpyCH4III ACNGT 7 cut(s) 87, 410, 623, 670, 826, 979, 1836
HpyCH4IV ACGT 2 cut(s) 1078, 1795
HpyF10VI GCNNNNNNNGC 9 cut(s) 241, 458, 470, 479, 545, 851, 872, 1027, 1103
HpyF3I CTNAG 9 cut(s) 214, 294, 1122, 1151, 1159, 1209, 1320, 1631, 1855
HpySE526I ACGT 2 cut(s) 1078, 1795
Hsp92I GRCGYC 2 cut(s) 180, 1795
Hsp92II CATG 5 cut(s) 212, 503, 584, 1367, 1571
KspAI GTTAAC 1 cut(s) 31
LguI GCTCTTC 1 cut(s) 339
LmnI GCTCC 5 cut(s) 553, 832, 1259, 1817, 1878
Lsp1109I GCAGC 9 cut(s) 460, 473, 490, 656, 853, 1093, 1541, 1594, 1742
LweI GCATC 3 cut(s) 646, 1008, 1704
MaeI CTAG 1 cut(s) 1341
MaeII ACGT 2 cut(s) 1078, 1795
MaeIII GTNAC 6 cut(s) 81, 1079, 1308, 1491, 1796, 1836
MflI RGATCY 3 cut(s) 217, 1328, 1403
MhlI GDGCHC 1 cut(s) 1883
MlsI TGGCCA 1 cut(s) 1664
MluCI AATT 7 cut(s) 467, 585, 747, 768, 896, 1136, 1498
MluNI TGGCCA 1 cut(s) 1664
MlyI GAGTC 1 cut(s) 1164
MmeI TCCRAC 1 cut(s) 354
Mox20I TGGCCA 1 cut(s) 1664
MroXI GAANNNNTTC 3 cut(s) 399, 540, 846
MscI TGGCCA 1 cut(s) 1664
MseI TTAA 7 cut(s) 30, 146, 225, 237, 591, 1172, 1598
Msp20I TGGCCA 1 cut(s) 1664
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 1 cut(s) 221
MspR9I CCNGG 1 cut(s) 1557
Mva1269I GAATGC 1 cut(s) 1342
MvaI CCWGG 1 cut(s) 1557
MwoI GCNNNNNNNGC 9 cut(s) 241, 458, 470, 479, 545, 851, 872, 1027, 1103
NcoI CCATGG 1 cut(s) 208
NlaIII CATG 5 cut(s) 212, 503, 584, 1367, 1571
NmeAIII GCCGAG 1 cut(s) 195
NmuCI GTSAC 5 cut(s) 81, 1079, 1308, 1491, 1796
NspI RCATGY 1 cut(s) 1367
NspV TTCGAA 1 cut(s) 490
PaeI GCATGC 1 cut(s) 1367
PciSI GCTCTTC 1 cut(s) 339
PctI GAATGC 1 cut(s) 1342
PdmI GAANNNNTTC 3 cut(s) 399, 540, 846
PfeI GAWTC 3 cut(s) 284, 924, 1517
Pfl23II CGTACG 1 cut(s) 826
PflFI GACNNNGTC 1 cut(s) 97
Ple19I CGATCG 1 cut(s) 1202
PleI GAGTC 1 cut(s) 1163
PpsI GAGTC 1 cut(s) 1163
Ppu21I YACGTR 1 cut(s) 1079
PshAI GACNNNNGTC 1 cut(s) 157
Psp6I CCWGG 1 cut(s) 1555
PspEI GGTNACC 2 cut(s) 1308, 1491
PspGI CCWGG 1 cut(s) 1555
PspLI CGTACG 1 cut(s) 826
PspPI GGNCC 3 cut(s) 619, 1178, 1232
PstI CTGCAG 2 cut(s) 478, 1059
PsuI RGATCY 3 cut(s) 217, 1328, 1403
PsyI GACNNNGTC 1 cut(s) 97
PvuI CGATCG 1 cut(s) 1202
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 5 cut(s) 64, 828, 862, 1345, 1425
RsaNI GTAC 5 cut(s) 63, 827, 861, 1344, 1424
SapI GCTCTTC 1 cut(s) 339
SaqAI TTAA 7 cut(s) 30, 146, 225, 237, 591, 1172, 1598
Sau96I GGNCC 3 cut(s) 619, 1178, 1232
ScaI AGTACT 1 cut(s) 1425
SchI GAGTC 1 cut(s) 1164
ScrFI CCNGG 1 cut(s) 1557
SduI GDGCHC 1 cut(s) 1883
SfaNI GCATC 3 cut(s) 646, 1008, 1704
SfcI CTRYAG 3 cut(s) 474, 978, 1055
SfuI TTCGAA 1 cut(s) 490
SinI GGWCC 1 cut(s) 619
SmlI CTYRAG 2 cut(s) 245, 566
SmoI CTYRAG 2 cut(s) 245, 566
SphI GCATGC 1 cut(s) 1367
Sse9I AATT 7 cut(s) 467, 585, 747, 768, 896, 1136, 1498
SsiI CCGC 4 cut(s) 1147, 1257, 1482, 1488
SspI AATATT 1 cut(s) 1356
SspMI CTAG 1 cut(s) 1341
StyD4I CCNGG 1 cut(s) 1555
StyI CCWWGG 2 cut(s) 208, 1252
TaaI ACNGT 7 cut(s) 87, 410, 623, 670, 826, 979, 1836
TaiI ACGT 2 cut(s) 1081, 1798
TaqI TCGA 7 cut(s) 490, 635, 1038, 1102, 1202, 1240, 1445
TasI AATT 7 cut(s) 467, 585, 747, 768, 896, 1136, 1498
TatI WGTACW 2 cut(s) 1343, 1423
TauI GCSGC 1 cut(s) 1150
TfiI GAWTC 3 cut(s) 284, 924, 1517
Tru1I TTAA 7 cut(s) 30, 146, 225, 237, 591, 1172, 1598
Tru9I TTAA 7 cut(s) 30, 146, 225, 237, 591, 1172, 1598
TscAI CASTG 2 cut(s) 882, 1195
TseFI GTSAC 5 cut(s) 81, 1079, 1308, 1491, 1796
TseI GCWGC 9 cut(s) 461, 473, 503, 644, 866, 1106, 1529, 1607, 1730
Tsp45I GTSAC 5 cut(s) 81, 1079, 1308, 1491, 1796
TspDTI ATGAA 7 cut(s) 179, 184, 488, 597, 749, 923, 927
TspGWI ACGGA 3 cut(s) 101, 169, 1407
TspRI CASTG 2 cut(s) 882, 1195
Tth111I GACNNNGTC 1 cut(s) 97
VpaK11BI GGWCC 1 cut(s) 619
XapI RAATTY 4 cut(s) 747, 768, 896, 1136
XceI RCATGY 1 cut(s) 1367
XmnI GAANNNNTTC 3 cut(s) 399, 540, 846
XspI CTAG 1 cut(s) 1341
ZraI GACGTC 1 cut(s) 1796
ZrmI AGTACT 1 cut(s) 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.