Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006600

Physical Location & Seq

Genomic Coordinates Reverse (-)

26932905 .. 26935825

Gene Structure 2921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G71490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGCTGAGTGAGAGTCTTTTCAAATCTCTTGGACATTTGGCCAGCCACGGTCATTTGCACGACGCTTTCAAAACGTTTTCTCTTCTTCGTCTTCAATCTTCTTCTGCAGTTTCAGATGACCTCGTTTTGCATTCCGCGGCTTCCCTTTTATCCGCTTGCGTTGATGTTCGTGCATTTTTAGCAGGGGTGCAAGTTCACGCTCACTGTATTTCGTCGGGTGTCGAATATCACTCTGTGTTAGTCCCAAAGCTGGTTACCTTTTACTCTGCTTTCAATCTCCACAATGAAGCTCAATCGATTATTGAGAACTCTGACATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCTTCGTATGCCAAGAACGAGCTTTTTGAGGAGGTTATTGCTGCTTACAAGAGAATGGTGAGCAAGGGAATCCGACCCGATGCCTTCACTTATCCGTCTGTTCTTAAGGCTTGTGGTGAAACACTTGACGTTGCCTTTGGAAGGGTGGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTCCAGCTTGTATGTTTGTAATGCATTGATCTCTATGTATAAAAGGTTTAGAAATATGGGTATTGCTCGGAGGTTGTTTGATCGAATGTTTGAAAGGGATGCTGTCTCATGGAATGCAGTGATAAACTGTTATGCTTCGGAAGGCATGTGGAGTGAAGCGTTTGAGCTTTTCGATAAAATGTGGTTTTCAGGTGTTGAGGTCAGTGTCATAACTTGGAATATTATTTCTGGAGGTTGTTTGCAAACAGGAAATTATGTAGGAGCTTTGGGTTTGATCTCTAGGATGAGAAATTTTCCTACGAGCTTAGATCCTGTGGCTATGATTATTGGTTTGAAGGCTTGCTCTCTCATAGGAGCAATACGATTGGGAAAAGAGATTCACGGTCTTGCTATTCACAGTTCTTATGATGGGATTGACAATGTTCGAAACACGTTGATCACAATGTACTCAAAATGCAAAGACCTTAGGCACGCCTTAATAGTGTTTCGACAGACTGAAGAAAATAGTTTGTGTACTTGGAACTCTATCATTTCCGGTTATGCGCAGCTGAACAAATCAGAAGAAGCCTCTCACCTGCTGAGGGAGATGTTGGTTGCTGGCTTTCAGCCAAATTCCATTACACTAGCAAGCATTCTCCCTCTTTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCATTGCTACATCCTGAGGCGCAAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTTGATGTTTATGCAAAATCGGGAAAGATTGTAGCTGCAAAGCAAGTATCTGATTTGATGAGCAAAAGAGACGAAGTAACATACACTTCCTTGATAGATGGATACGGAAATCAAGGTGAAGGGGGAGTAGCCTTGGCCCTGTTCAAGGAGATGACCAGATCTGGTATTAAACCTGACCATGTAACCGTGGTTGCAGTTCTATCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGTGAAAGGCTGTTTATGAAGATGCAGTGTGAGTATGGTATACGTCCTTGTCTTCAACATTTTTCTTGTATGGTTGATCTCTATGGCAGAGCAGGTTTCCTAGCAAAAGCCAAAGACATAATTCACAATATGCCATATAAGCCATCCGGTGCCACGTGGGCTACCCTACTGAACGCGTGTCACATCCATGGGAACACACAGATTGGTAAATGGGCAGCAGAAAAGCTCCTGGAGATGAAGCCAGAGAACCCGGGATACTACGTGTTAATTGCAAATATGTATGCAGCTGCTGGTTCTTGGAGCAAGCTTGCTGAAGTGAGGACTATAATGAGGGACTTGGGTGTGAAAAAGGATCCTGGCTGTGCTTGGATCGACACAGATTCTGGATTTTCACTGTTTTCGGTGGGGGACACATCAAGCCCTGAAGCATGTAATACTTATCCTCTATTAGATGGACTGAATCAGCTGATGAAAGACAATGCTGGTTATGCCATCAATAAGGTGCAAAGTTCAGATGAAGAACTTCTTCAAGAAATGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

681

Amino Acids

75.41

Weight (kDa)

7.3

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	112 - 154	4.9e-09	PPR repeat family
PPR_1	PF12854	206 - 236	1.4e-06	PPR repeat
PPR_2	PF13041	209 - 255	2.4e-11	PPR repeat family
PPR	PF01535	211 - 241	1.1e-08	PPR repeat
PPR_2	PF13041	346 - 391	1e-08	PPR repeat family
PPR	PF01535	348 - 377	1.8e-06	PPR repeat
PPR_2	PF13041	447 - 494	6.2e-12	PPR repeat family
PPR	PF01535	449 - 479	4.7e-07	PPR repeat
E_motif	PF20431	564 - 626	1.3e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22830 AT1G22830 AT1G71490
fragaria_vesca	FvH4_5g32370
malus_domestica	MD04G1056500.v1.1 MD15G1404200.v1.1
prunus_persica	Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1
pyrus_communis	pycom04g04960 pycom15g36160
rosa_chinensis	RchiOBHm_Chr7g0228861
rosa_laevigata	RLG00000001540 RLG00000002151 RLG00000002152
rosa_multiflora	Rmu_co8395259.1_g000001 Rmu_sc0004517.1_g000002 Rmu_sc0011218.1_g000005 Rmu_sc0013945.1_g000009
rosa_rugosa	Rorug07G0252400 Rorug07G0252500
rosa_samantha	Rh7AG405700 Rh7BG385000 Rh7CG423300 Rh7DG399700
rosa_wichuraiana	Rw7G033610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1110
Acc16I	TGCGCA	1 cut(s)	1071
Acc36I	ACCTGC	3 cut(s)	1110, 1197, 1586
AccB1I	GGYRCC	1 cut(s)	1652
AccI	GTMKAC	1 cut(s)	1543
AccII	CGCG	2 cut(s)	137, 1679
AciI	CCGC	3 cut(s)	135, 137, 153
AclI	AACGTT	1 cut(s)	74
AclWI	GGATC	4 cut(s)	830, 1850, 1863, 1880
AcoI	YGGCCR	1 cut(s)	39
AcsI	RAATTY	2 cut(s)	817, 1138
AcuI	CTGAAG	3 cut(s)	1044, 1836, 1947
AcvI	CACGTG	1 cut(s)	1659
AdeI	CACNNNGTG	1 cut(s)	235
AfaI	GTAC	2 cut(s)	974, 1042
AfiI	CCNNNNNNNGG	5 cut(s)	250, 333, 489, 1108, 1414
AflII	CTTAAG	1 cut(s)	452
AflIII	ACRYGT	3 cut(s)	957, 1677, 1764
AjnI	CCWGG	2 cut(s)	1731, 1858
AloI	GAACNNNNNNTCC	2 cut(s)	480, 512
Alw21I	GWGCWC	2 cut(s)	345, 1177
Alw26I	GTCTC	2 cut(s)	637, 1332
AlwI	GGATC	4 cut(s)	830, 1850, 1863, 1880
AlwNI	CAGNNNCTG	2 cut(s)	1793, 1886
Ama87I	CYCGRG	1 cut(s)	1753
AoxI	GGCC	2 cut(s)	39, 1404
ApeKI	GCWGC	6 cut(s)	389, 1072, 1304, 1718, 1787, 1790
ApoI	RAATTY	2 cut(s)	817, 1138
ArsI	GACNNNNNNTTYG	2 cut(s)	467, 499
Asp700I	GAANNNNTTC	2 cut(s)	2025, 2028
AspLEI	GCGC	2 cut(s)	1072, 1230
AspS9I	GGNCC	1 cut(s)	1405
AsuC2I	CCSGG	2 cut(s)	1754, 1755
AsuHPI	GGTGA	5 cut(s)	418, 476, 1091, 1397, 1517
AsuII	TTCGAA	1 cut(s)	952
AvaI	CYCGRG	1 cut(s)	1753
AxyI	CCTNAGG	2 cut(s)	992, 1223
BalI	TGGCCA	1 cut(s)	41
BamHI	GGATCC	1 cut(s)	1855
BanI	GGYRCC	1 cut(s)	1652
BbrPI	CACGTG	1 cut(s)	1659
BbsI	GAAGAC	2 cut(s)	83, 1547
Bbv12I	GWGCWC	2 cut(s)	345, 1177
BbvCI	CCTCAGC	1 cut(s)	1106
BbvI	GCAGC	6 cut(s)	376, 1084, 1291, 1730, 1777, 1799
BccI	CCATC	6 cut(s)	515, 929, 1361, 1654, 1949, 2003
BciT130I	CCWGG	2 cut(s)	1733, 1860
BciVI	GTATCC	2 cut(s)	1364, 1751
BclI	TGATCA	1 cut(s)	963
BcnI	CCSGG	2 cut(s)	1754, 1755
BcoDI	GTCTC	2 cut(s)	637, 1332
BfaI	CTAG	3 cut(s)	807, 1151, 1604
BfmI	CTRYAG	2 cut(s)	105, 1477
BfrI	CTTAAG	1 cut(s)	452
BfuAI	ACCTGC	3 cut(s)	1110, 1197, 1586
BfuI	GTATCC	2 cut(s)	1364, 1751
BglI	GCCNNNNNGGC	1 cut(s)	1661
BglII	AGATCT	1 cut(s)	1427
BisI	GCNGC	7 cut(s)	138, 390, 1073, 1305, 1719, 1788, 1791
BlsI	GCNGC	7 cut(s)	139, 391, 1074, 1306, 1720, 1789, 1792
Bme1390I	CCNGG	4 cut(s)	1733, 1754, 1755, 1860
BmeT110I	CYCGRG	1 cut(s)	1753
BmgT120I	GGNCC	1 cut(s)	1405
BmiI	GGNNCC	3 cut(s)	505, 1654, 1857
BmrFI	CCNGG	4 cut(s)	1733, 1754, 1755, 1860
BmsI	GCATC	4 cut(s)	331, 418, 616, 1515
BpiI	GAAGAC	2 cut(s)	83, 1547
BplI	GAGNNNNNCTC	2 cut(s)	503, 535
BpmI	CTGGAG	2 cut(s)	777, 1754
Bpu10I	CCTNAGC	1 cut(s)	1106
Bpu14I	TTCGAA	1 cut(s)	952
BpuMI	CCSGG	2 cut(s)	1754, 1755
Bsa29I	ATCGAT	1 cut(s)	296
BsaAI	YACGTR	2 cut(s)	1659, 1765
BsaJI	CCNNGG	7 cut(s)	46, 135, 332, 1401, 1455, 1690, 1753
BsaWI	WCCGGW	2 cut(s)	1061, 1649
Bsc4I	CCNNNNNNNGG	5 cut(s)	250, 333, 489, 1108, 1414
Bse21I	CCTNAGG	2 cut(s)	992, 1223
Bse3DI	GCAATG	2 cut(s)	345, 1210
BseBI	CCWGG	2 cut(s)	1733, 1860
BseCI	ATCGAT	1 cut(s)	296
BseDI	CCNNGG	7 cut(s)	46, 135, 332, 1401, 1455, 1690, 1753
BseGI	GGATG	6 cut(s)	322, 631, 816, 1218, 1646, 1686
BseLI	CCNNNNNNNGG	5 cut(s)	250, 333, 489, 1108, 1414
BseMI	GCAATG	2 cut(s)	345, 1210
BseMII	CTCAG	2 cut(s)	1097, 1214
BseRI	GAGGAG	1 cut(s)	392
BseXI	GCAGC	6 cut(s)	376, 1084, 1291, 1730, 1777, 1799
Bsh1236I	CGCG	2 cut(s)	137, 1679
BshFI	GGCC	2 cut(s)	41, 1406
BshNI	GGYRCC	1 cut(s)	1652
BshVI	ATCGAT	1 cut(s)	296
BsiHKAI	GWGCWC	2 cut(s)	345, 1177
BsiHKCI	CYCGRG	1 cut(s)	1753
BsiSI	CCGG	3 cut(s)	1062, 1650, 1754
BslFI	GGGAC	3 cut(s)	227, 1850, 1925
BslI	CCNNNNNNNGG	5 cut(s)	250, 333, 489, 1108, 1414
BsmAI	GTCTC	2 cut(s)	637, 1332
BsmBI	CGTCTC	1 cut(s)	1332
BsmFI	GGGAC	3 cut(s)	227, 1850, 1925
BsmI	GAATGC	3 cut(s)	130, 646, 1158
BsnI	GGCC	2 cut(s)	41, 1406
BsoBI	CYCGRG	1 cut(s)	1753
Bsp119I	TTCGAA	1 cut(s)	952
Bsp1286I	GDGCHC	2 cut(s)	345, 1177
Bsp143I	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
Bsp19I	CCATGG	1 cut(s)	1690
BspACI	CCGC	3 cut(s)	135, 137, 153
BspANI	GGCC	2 cut(s)	41, 1406
BspCNI	CTCAG	2 cut(s)	1098, 1215
BspDI	ATCGAT	1 cut(s)	296
BspFNI	CGCG	2 cut(s)	137, 1679
BspLI	GGNNCC	3 cut(s)	505, 1654, 1857
BspMAI	CTGCAG	2 cut(s)	109, 1481
BspMI	ACCTGC	3 cut(s)	1110, 1197, 1586
BspPI	GGATC	4 cut(s)	830, 1850, 1863, 1880
BspT104I	TTCGAA	1 cut(s)	952
BspT107I	GGYRCC	1 cut(s)	1652
BspTI	CTTAAG	1 cut(s)	452
BsrDI	GCAATG	2 cut(s)	345, 1210
BssECI	CCNNGG	7 cut(s)	46, 135, 332, 1401, 1455, 1690, 1753
BssMI	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
BssNAI	GTATAC	1 cut(s)	1544
BssT1I	CCWWGG	3 cut(s)	332, 1401, 1690
Bst1107I	GTATAC	1 cut(s)	1544
Bst2UI	CCWGG	2 cut(s)	1733, 1860
Bst4CI	ACNGT	7 cut(s)	50, 206, 656, 911, 926, 1456, 1899
Bst6I	CTCTTC	1 cut(s)	87
BstAFI	CTTAAG	1 cut(s)	452
BstBAI	YACGTR	2 cut(s)	1659, 1765
BstBI	TTCGAA	1 cut(s)	952
BstC8I	GCNNGC	9 cut(s)	43, 157, 868, 999, 1126, 1156, 1477, 1808, 1812
BstDEI	CTNAG	5 cut(s)	5, 832, 992, 1106, 1223
BstDSI	CCRYGG	4 cut(s)	46, 135, 1455, 1690
BstEII	GGTNACC	1 cut(s)	253
BstENI	CCTNNNNNAGG	2 cut(s)	487, 1412
BstF5I	GGATG	6 cut(s)	322, 631, 816, 1218, 1646, 1686
BstFNI	CGCG	2 cut(s)	137, 1679
BstHHI	GCGC	2 cut(s)	1072, 1230
BstKTI	GATC	9 cut(s)	558, 610, 804, 838, 966, 1430, 1582, 1858, 1875
BstMAI	GTCTC	2 cut(s)	637, 1332
BstMBI	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
BstMWI	GCNNNNNNNGC	6 cut(s)	179, 356, 1181, 1642, 1661, 1991
BstNI	CCWGG	2 cut(s)	1733, 1860
BstNSI	RCATGY	2 cut(s)	676, 1935
BstPI	GGTNACC	1 cut(s)	253
BstSCI	CCNGG	4 cut(s)	1731, 1752, 1753, 1858
BstSFI	CTRYAG	2 cut(s)	105, 1477
BstUI	CGCG	2 cut(s)	137, 1679
BstV1I	GCAGC	6 cut(s)	376, 1084, 1291, 1730, 1777, 1799
BstV2I	GAAGAC	2 cut(s)	83, 1547
BstX2I	RGATCY	3 cut(s)	835, 1427, 1855
BstYI	RGATCY	3 cut(s)	835, 1427, 1855
BstZ17I	GTATAC	1 cut(s)	1544
Bsu15I	ATCGAT	1 cut(s)	296
Bsu36I	CCTNAGG	2 cut(s)	992, 1223
BsuI	GTATCC	2 cut(s)	1364, 1751
BsuRI	GGCC	2 cut(s)	41, 1406
BsuTUI	ATCGAT	1 cut(s)	296
BtgI	CCRYGG	4 cut(s)	46, 135, 1455, 1690
BtsCI	GGATG	6 cut(s)	322, 631, 816, 1218, 1646, 1686
BtsI	GCAGTG	2 cut(s)	651, 1535
BtsIMutI	CAGTG	5 cut(s)	202, 651, 736, 1535, 1895
BveI	ACCTGC	3 cut(s)	1110, 1197, 1586
Cac8I	GCNNGC	9 cut(s)	43, 157, 868, 999, 1126, 1156, 1477, 1808, 1812
CaiI	CAGNNNCTG	2 cut(s)	1793, 1886
CfoI	GCGC	2 cut(s)	1072, 1230
Cfr13I	GGNCC	1 cut(s)	1405
Cfr42I	CCGCGG	1 cut(s)	138
Cfr9I	CCCGGG	1 cut(s)	1753
ClaI	ATCGAT	1 cut(s)	296
CseI	GACGC	1 cut(s)	71
Csp6I	GTAC	2 cut(s)	973, 1041
CviAII	CATG	8 cut(s)	500, 636, 673, 1196, 1448, 1499, 1691, 1932
CviQI	GTAC	2 cut(s)	973, 1041
DdeI	CTNAG	5 cut(s)	5, 832, 992, 1106, 1223
DpnI	GATC	9 cut(s)	557, 609, 803, 837, 965, 1429, 1581, 1857, 1874
DpnII	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
DraIII	CACNNNGTG	1 cut(s)	235
EaeI	YGGCCR	1 cut(s)	39
Eam1104I	CTCTTC	1 cut(s)	87
EarI	CTCTTC	1 cut(s)	87
Eco130I	CCWWGG	3 cut(s)	332, 1401, 1690
Eco57I	CTGAAG	3 cut(s)	1044, 1836, 1947
Eco72I	CACGTG	1 cut(s)	1659
Eco81I	CCTNAGG	2 cut(s)	992, 1223
Eco88I	CYCGRG	1 cut(s)	1753
Eco91I	GGTNACC	1 cut(s)	253
EcoNI	CCTNNNNNAGG	2 cut(s)	487, 1412
EcoO65I	GGTNACC	1 cut(s)	253
EcoRII	CCWGG	2 cut(s)	1731, 1858
EcoT14I	CCWWGG	3 cut(s)	332, 1401, 1690
EcoT22I	ATGCAT	1 cut(s)	553
ErhI	CCWWGG	3 cut(s)	332, 1401, 1690
Esp3I	CGTCTC	1 cut(s)	1332
FaeI	CATG	8 cut(s)	503, 639, 676, 1199, 1451, 1502, 1694, 1935
FalI	AAGNNNNNCTT	4 cut(s)	518, 550, 2013, 2045
FaqI	GGGAC	3 cut(s)	227, 1850, 1925
FatI	CATG	8 cut(s)	499, 635, 672, 1195, 1447, 1498, 1690, 1931
FbaI	TGATCA	1 cut(s)	963
FblI	GTMKAC	1 cut(s)	1543
Fnu4HI	GCNGC	7 cut(s)	138, 390, 1073, 1305, 1719, 1788, 1791
FokI	GGATG	6 cut(s)	309, 638, 823, 1205, 1633, 1673
Fsp4HI	GCNGC	7 cut(s)	138, 390, 1073, 1305, 1719, 1788, 1791
FspBI	CTAG	3 cut(s)	807, 1151, 1604
FspI	TGCGCA	1 cut(s)	1071
GlaI	GCGC	2 cut(s)	1071, 1229
GluI	GCNGC	7 cut(s)	138, 390, 1073, 1305, 1719, 1788, 1791
GsuI	CTGGAG	2 cut(s)	777, 1754
HaeIII	GGCC	2 cut(s)	41, 1406
HapII	CCGG	3 cut(s)	1062, 1650, 1754
HgaI	GACGC	1 cut(s)	71
HhaI	GCGC	2 cut(s)	1072, 1230
Hin1II	CATG	8 cut(s)	503, 639, 676, 1199, 1451, 1502, 1694, 1935
Hin6I	GCGC	2 cut(s)	1070, 1228
HinP1I	GCGC	2 cut(s)	1070, 1228
HindIII	AAGCTT	1 cut(s)	1808
HinfI	GANTC	5 cut(s)	13, 417, 904, 1883, 1963
HpaII	CCGG	3 cut(s)	1062, 1650, 1754
HphI	GGTGA	5 cut(s)	418, 476, 1091, 1397, 1517
Hpy166II	GTNNAC	3 cut(s)	196, 1041, 1544
Hpy188I	TCNGA	9 cut(s)	115, 313, 422, 597, 667, 1087, 1179, 1321, 2017
Hpy188III	TCNNGA	5 cut(s)	756, 1222, 1290, 1887, 2033
Hpy8I	GTNNAC	3 cut(s)	196, 1041, 1544
Hpy99I	CGWCG	2 cut(s)	65, 217
HpyAV	CCTTC	6 cut(s)	442, 483, 662, 856, 1382, 1496
HpyCH4III	ACNGT	7 cut(s)	50, 206, 656, 911, 926, 1456, 1899
HpyCH4IV	ACGT	6 cut(s)	74, 477, 959, 1546, 1658, 1764
HpyF10VI	GCNNNNNNNGC	6 cut(s)	179, 356, 1181, 1642, 1661, 1991
HpyF3I	CTNAG	5 cut(s)	5, 832, 992, 1106, 1223
HpySE526I	ACGT	6 cut(s)	74, 477, 959, 1546, 1658, 1764
Hsp92II	CATG	8 cut(s)	503, 639, 676, 1199, 1451, 1502, 1694, 1935
HspAI	GCGC	2 cut(s)	1070, 1228
Ksp22I	TGATCA	1 cut(s)	963
KspI	CCGCGG	1 cut(s)	138
Kzo9I	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
LmnI	GCTCC	4 cut(s)	788, 881, 1734, 1803
Lsp1109I	GCAGC	6 cut(s)	376, 1084, 1291, 1730, 1777, 1799
LweI	GCATC	4 cut(s)	331, 418, 616, 1515
MaeI	CTAG	3 cut(s)	807, 1151, 1604
MaeII	ACGT	6 cut(s)	74, 477, 959, 1546, 1658, 1764
MaeIII	GTNAC	4 cut(s)	253, 1345, 1450, 1682
MalI	GATC	9 cut(s)	557, 609, 803, 837, 965, 1429, 1581, 1857, 1874
MboI	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
MflI	RGATCY	3 cut(s)	835, 1427, 1855
MhlI	GDGCHC	2 cut(s)	345, 1177
MlsI	TGGCCA	1 cut(s)	41
MluCI	AATT	5 cut(s)	778, 817, 1138, 1623, 1770
MluI	ACGCGT	1 cut(s)	1677
MluNI	TGGCCA	1 cut(s)	41
MlyI	GAGTC	1 cut(s)	22
MmeI	TCCRAC	1 cut(s)	445
Mox20I	TGGCCA	1 cut(s)	41
Mph1103I	ATGCAT	1 cut(s)	553
MroXI	GAANNNNTTC	2 cut(s)	2025, 2028
MscI	TGGCCA	1 cut(s)	41
MseI	TTAA	4 cut(s)	453, 1004, 1437, 1769
MslI	CAYNNNNRTG	2 cut(s)	1503, 1689
Msp20I	TGGCCA	1 cut(s)	41
MspA1I	CMGCKG	4 cut(s)	137, 1075, 1790, 1969
MspCI	CTTAAG	1 cut(s)	452
MspI	CCGG	3 cut(s)	1062, 1650, 1754
MspR9I	CCNGG	4 cut(s)	1733, 1754, 1755, 1860
Mva1269I	GAATGC	3 cut(s)	130, 646, 1158
MvaI	CCWGG	2 cut(s)	1733, 1860
MvnI	CGCG	2 cut(s)	137, 1679
MwoI	GCNNNNNNNGC	6 cut(s)	179, 356, 1181, 1642, 1661, 1991
NciI	CCSGG	2 cut(s)	1754, 1755
NcoI	CCATGG	1 cut(s)	1690
NdeII	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
NlaIII	CATG	8 cut(s)	503, 639, 676, 1199, 1451, 1502, 1694, 1935
NlaIV	GGNNCC	3 cut(s)	505, 1654, 1857
NmuCI	GTSAC	1 cut(s)	1682
NsbI	TGCGCA	1 cut(s)	1071
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	2 cut(s)	676, 1935
NspV	TTCGAA	1 cut(s)	952
PaqCI	CACCTGC	1 cut(s)	1110
PctI	GAATGC	3 cut(s)	130, 646, 1158
PdmI	GAANNNNTTC	2 cut(s)	2025, 2028
PfeI	GAWTC	4 cut(s)	417, 904, 1883, 1963
PfoI	TCCNGGA	1 cut(s)	1731
PkrI	GCNGC	7 cut(s)	139, 391, 1074, 1306, 1720, 1789, 1792
PleI	GAGTC	1 cut(s)	21
PmaCI	CACGTG	1 cut(s)	1659
PmlI	CACGTG	1 cut(s)	1659
PpsI	GAGTC	1 cut(s)	21
Ppu21I	YACGTR	2 cut(s)	1659, 1765
Psp1406I	AACGTT	1 cut(s)	74
Psp6I	CCWGG	2 cut(s)	1731, 1858
PspCI	CACGTG	1 cut(s)	1659
PspEI	GGTNACC	1 cut(s)	253
PspGI	CCWGG	2 cut(s)	1731, 1858
PspN4I	GGNNCC	3 cut(s)	505, 1654, 1857
PspPI	GGNCC	1 cut(s)	1405
PsrI	GAACNNNNNNTAC	2 cut(s)	1742, 1774
PstI	CTGCAG	2 cut(s)	109, 1481
PstNI	CAGNNNCTG	2 cut(s)	1793, 1886
PsuI	RGATCY	3 cut(s)	835, 1427, 1855
PvuII	CAGCTG	3 cut(s)	1075, 1790, 1969
RsaI	GTAC	2 cut(s)	974, 1042
RsaNI	GTAC	2 cut(s)	973, 1041
RseI	CAYNNNNRTG	2 cut(s)	1503, 1689
SacII	CCGCGG	1 cut(s)	138
SaqAI	TTAA	4 cut(s)	453, 1004, 1437, 1769
SatI	GCNGC	7 cut(s)	138, 390, 1073, 1305, 1719, 1788, 1791
Sau3AI	GATC	9 cut(s)	555, 607, 801, 835, 963, 1427, 1579, 1855, 1872
Sau96I	GGNCC	1 cut(s)	1405
SchI	GAGTC	1 cut(s)	22
ScrFI	CCNGG	4 cut(s)	1733, 1754, 1755, 1860
SduI	GDGCHC	2 cut(s)	345, 1177
SfaNI	GCATC	4 cut(s)	331, 418, 616, 1515
SfcI	CTRYAG	2 cut(s)	105, 1477
Sfr303I	CCGCGG	1 cut(s)	138
SfuI	TTCGAA	1 cut(s)	952
SgrBI	CCGCGG	1 cut(s)	138
SmaI	CCCGGG	1 cut(s)	1755
SmiMI	CAYNNNNRTG	2 cut(s)	1503, 1689
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
Sse9I	AATT	5 cut(s)	778, 817, 1138, 1623, 1770
SsiI	CCGC	3 cut(s)	135, 137, 153
SspI	AATATT	1 cut(s)	748
SspMI	CTAG	3 cut(s)	807, 1151, 1604
StyD4I	CCNGG	4 cut(s)	1731, 1752, 1753, 1858
StyI	CCWWGG	3 cut(s)	332, 1401, 1690
TaaI	ACNGT	7 cut(s)	50, 206, 656, 911, 926, 1456, 1899
TaiI	ACGT	6 cut(s)	77, 480, 962, 1549, 1661, 1767
TaqI	TCGA	8 cut(s)	222, 296, 510, 610, 699, 952, 1015, 1875
TasI	AATT	5 cut(s)	778, 817, 1138, 1623, 1770
TatI	WGTACW	2 cut(s)	972, 1040
TauI	GCSGC	1 cut(s)	140
TfiI	GAWTC	4 cut(s)	417, 904, 1883, 1963
Tru1I	TTAA	4 cut(s)	453, 1004, 1437, 1769
Tru9I	TTAA	4 cut(s)	453, 1004, 1437, 1769
TscAI	CASTG	5 cut(s)	209, 651, 736, 1535, 1902
TseFI	GTSAC	1 cut(s)	1682
TseI	GCWGC	6 cut(s)	389, 1072, 1304, 1718, 1787, 1790
Tsp45I	GTSAC	1 cut(s)	1682
TspDTI	ATGAA	8 cut(s)	300, 488, 1199, 1515, 1535, 1754, 1988, 2034
TspGWI	ACGGA	2 cut(s)	432, 1389
TspMI	CCCGGG	1 cut(s)	1753
TspRI	CASTG	5 cut(s)	209, 651, 736, 1535, 1902
Vha464I	CTTAAG	1 cut(s)	452
XagI	CCTNNNNNAGG	2 cut(s)	487, 1412
XapI	RAATTY	2 cut(s)	817, 1138
XceI	RCATGY	2 cut(s)	676, 1935
XmaI	CCCGGG	1 cut(s)	1753
XmiI	GTMKAC	1 cut(s)	1543
XmnI	GAANNNNTTC	2 cut(s)	2025, 2028
XspI	CTAG	3 cut(s)	807, 1151, 1604
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.