Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006600

Physical Location & Seq

Genomic Coordinates Forward (+)

23374726 .. 23378218

Gene Structure 3493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g32370.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGCCATCATCTTATCCTCATTTCACCCCAAAGGAACTTTTTCTTTCCCAAATCCAGAGATTCATACCTAAGCCATGGAAAGAAGGTATCAAACAGCTTGCGAAATCATCATCTATTTTAGAACCGAGCTTACCAGTTGGTGATTCTATGATAGATTCTCTCCTTGCATCGATTAAAAATTATGCACGTGAAGGACATCTATCAGAAGCATTCAGAAGCCTGTCTCTTATTAAGCTCCATGCCTCTTCTAGTACGTCTTGTGATGCTGTCTTACATTCCATCTCTTCTCTTCTTGCCTCCTGCACCAGCCATAAATCACTCCCACAGGGTAAACAGCTTCATGCACAGATTATCAGATTGGGTCTTGAACAGCACCCCATTTTGGTTCCCAAGCTGGTCACATTTTACTCAAGCTTTAATTCCCATGGTGATGCTCATATCGTCGTTGAAAATTCCAATGTATTGCATCCTCTACCTTGGAATTTGCTCATCTCTTCATATGTTAAAGATGAACTTCTAAACGAGGCTCTCGCTACCTATGAACAAATGGTCAAGAGGGGGATCAAGCCAGATTGTTTTACTTATCCATCAGTTCTTAAGGCTTGTGGTGAGAAATTGGATATAGGTTTTGGGAAGGAGGTGCATAAGTCCATTGATGCTAGTTGTGAGTGGAATTTGTTTGTGCATAATTCATTGGTCTCCATGTATGGAAAGTTTGGGCTTGTGGATGTTGCTCGTCAGTTGTTTGACATTATGCCCCAAAGGGATACAATTTCTTGGAATTCAATGATCTCCTGTTATGCCTCCAAAGGTATGTGGAACGAAGCATTTGAACTGTTTGGAAATTTGCAGATGGAGGGTACTGAAATAAGTATTATAACATGGAATACTATAGCTGGAGGTTGCTTGAGAACAGGAAATATAAAGGGTGCTCTGGAGTTGCTTTCTCAAATGAGAGTTTGTGGTATTCAGCTGGACTCGGTGGCATTTTCTGTTGGGCTTAGTGCTTCTTCCCACATTGGAGCCATTAAGTTAGGGAAGGAGATGCATGGTTCTGCAATTCGTAGTTGTTGTGATGGGTATGACAATGTTCGAAATGCATTAATAACAATGTATTCCAGGTGCAAAGATCTAAGGCATGCCTACACTTTGTTTCAATCAGTAGAAGATAGGAGTATAATCACTTGGAACTCCATGATTTCTGGTTATTCCCACATGGATCGAGCGGAGGAAGCTTCATTCATATTTAGAGAGATGTTGTGTTGTGGAATTGAACCCAATCATGTTACAATTGCCAGCATCCTGTCTCTTTGTGCTCGGGTTGCAAATCTTCAACATGGGAAGGAATTTCACTGCTACATTACAAAACGTGTTGTGTTTGGTGATTATCTAATGCTGTGGAATGCTCTTGTGGACATGTATGCCAGATCAGGGAAGGTTGTAGAAGCTAAACGAGTGTTCGATTCAATGAATAAGAAGGATGAGGTAACCTATACTTCCATGATTGCAGGATATGGAGTACAGGGTGAGGGAAAAGCTGCAATGAAGTTATTTGAAGAGATGAATAGCTTAAACATCAGACCAGATCACGTAACCATGGTTTCCATTATATCAGCATGCAGTCATTCAGGACTTGTAATCCAAGGCCAAATTCTATTTGAAAGGATGGTGAGTACGTATGGCATAACTCCCAATTTGGAGCACTATTCTTGCATGGTTGATCTCTATGGGAGGGCTGGTCTATTACATAATGCGAAAGATATTATCAGGAGGATGCCTTACAAGCCAACTTCTGCCATGTGGGCCACTCTGATCGGAGCGTGTCATATCCATGGAAACACAGAGATTGGGGAATGGGCTGCTGAGATGCTATTACAGATGAGACCTGAGCATTCTGGTTACTATGTGTTAATTGCTAACATGTATGCTGCTGCTGGTCGTTGGAACAACCTAGCTAGAGTGAGGACTTACATGAGGGAATTGGGTGTAAGGAAAGCTCCTGGACTTTCTTGGGTTGACGTGGGTGATGGATTCTCTCTCTTTTTGGTGGGGGACACAACAAATCAACTGAGAAATGAAATTTACCTTCTGCTGGATGGATTAAGTGAGCTAATGAGAGATGCTGATTATAGAGGGGATTGTAGCTCAGACTATGCAGCTTTTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

723

Amino Acids

80.61

Weight (kDa)

6.7

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	160 - 202	6e-11	PPR repeat family
PPR_2	PF13041	256 - 294	1.7e-06	PPR repeat family
PPR	PF01535	258 - 287	3.4e-07	PPR repeat
PPR_2	PF13041	291 - 332	2.5e-06	PPR repeat family
PPR_2	PF13041	392 - 439	1.3e-09	PPR repeat family
PPR	PF01535	394 - 424	2.4e-07	PPR repeat
PPR_2	PF13041	494 - 541	4.4e-12	PPR repeat family
PPR	PF01535	496 - 525	1e-06	PPR repeat
E_motif	PF20431	611 - 673	3.9e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22830 AT1G22830 AT1G71490
fragaria_vesca	FvH4_5g32370
malus_domestica	MD04G1056500.v1.1 MD15G1404200.v1.1
prunus_persica	Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1
pyrus_communis	pycom04g04960 pycom15g36160
rosa_chinensis	RchiOBHm_Chr7g0228861
rosa_laevigata	RLG00000001540 RLG00000002151 RLG00000002152
rosa_multiflora	Rmu_co8395259.1_g000001 Rmu_sc0004517.1_g000002 Rmu_sc0011218.1_g000005 Rmu_sc0013945.1_g000009
rosa_rugosa	Rorug07G0252400 Rorug07G0252500
rosa_samantha	Rh7AG405700 Rh7BG385000 Rh7CG423300 Rh7DG399700
rosa_wichuraiana	Rw7G033610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	878
AccBSI	CCGCTC	1 cut(s)	1226
AciI	CCGC	1 cut(s)	1226
AclWI	GGATC	2 cut(s)	569, 1227
AcsI	RAATTY	8 cut(s)	451, 481, 673, 781, 844, 1346, 1650, 2079
AcvI	CACGTG	1 cut(s)	188
AfaI	GTAC	4 cut(s)	253, 862, 1521, 1675
AfiI	CCNNNNNNNGG	3 cut(s)	382, 1431, 2092
AflII	CTTAAG	1 cut(s)	596
AflIII	ACRYGT	3 cut(s)	1369, 1416, 1920
AjiI	CACGTC	1 cut(s)	2020
AjnI	CCWGG	2 cut(s)	1118, 1999
AjuI	GAANNNNNNNTTGG	2 cut(s)	1635, 1667
Alw21I	GWGCWC	3 cut(s)	934, 1318, 1704
Alw26I	GTCTC	4 cut(s)	228, 703, 1311, 1876
AlwI	GGATC	2 cut(s)	569, 1227
Ama87I	CYCGRG	1 cut(s)	1317
AoxI	GGCC	2 cut(s)	1645, 1803
ApeKI	GCWGC	5 cut(s)	1538, 1859, 1928, 1931, 2156
ApoI	RAATTY	8 cut(s)	451, 481, 673, 781, 844, 1346, 1650, 2079
AseI	ATTAAT	1 cut(s)	1103
Asp700I	GAANNNNTTC	1 cut(s)	39
AspS9I	GGNCC	1 cut(s)	1803
AsuHPI	GGTGA	8 cut(s)	16, 152, 440, 620, 1394, 1538, 1681, 2036
AsuII	TTCGAA	1 cut(s)	1093
AvaI	CYCGRG	1 cut(s)	1317
BbrPI	CACGTG	1 cut(s)	188
Bbv12I	GWGCWC	3 cut(s)	934, 1318, 1704
BbvI	GCAGC	4 cut(s)	1525, 1846, 1915, 1918
BccI	CCATC	8 cut(s)	13, 287, 595, 847, 1070, 1660, 2021, 2090
BciT130I	CCWGG	2 cut(s)	1120, 2001
BciVI	GTATCC	1 cut(s)	760
BcoDI	GTCTC	4 cut(s)	228, 703, 1311, 1876
BfaI	CTAG	4 cut(s)	249, 660, 1952, 1956
BfmI	CTRYAG	1 cut(s)	891
BfrI	CTTAAG	1 cut(s)	596
BfuI	GTATCC	1 cut(s)	760
BglI	GCCNNNNNGGC	1 cut(s)	1802
BglII	AGATCT	1 cut(s)	1129
BisI	GCNGC	5 cut(s)	1539, 1860, 1929, 1932, 2157
BlsI	GCNGC	5 cut(s)	1540, 1861, 1930, 1933, 2158
Bme1390I	CCNGG	2 cut(s)	1120, 2001
BmeT110I	CYCGRG	1 cut(s)	1317
BmgBI	CACGTC	1 cut(s)	2020
BmgT120I	GGNCC	1 cut(s)	1803
BmiI	GGNNCC	2 cut(s)	387, 1024
BmrFI	CCNGG	2 cut(s)	1120, 2001
BpmI	CTGGAG	2 cut(s)	918, 956
Bpu10I	CCTNAGC	2 cut(s)	69, 1887
Bpu14I	TTCGAA	1 cut(s)	1093
BpuEI	CTTGAG	2 cut(s)	394, 928
Bsa29I	ATCGAT	1 cut(s)	170
BsaAI	YACGTR	3 cut(s)	188, 1591, 1677
BsaI	GGTCTC	2 cut(s)	703, 1876
BsaJI	CCNNGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
BsaXI	ACNNNNNCTCC	2 cut(s)	1723, 1753
Bsc4I	CCNNNNNNNGG	3 cut(s)	382, 1431, 2092
Bse1I	ACTGG	1 cut(s)	134
Bse3DI	GCAATG	1 cut(s)	1548
BseBI	CCWGG	2 cut(s)	1120, 2001
BseCI	ATCGAT	1 cut(s)	170
BseDI	CCNNGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
BseGI	GGATG	7 cut(s)	466, 733, 1299, 1486, 1671, 1779, 2101
BseLI	CCNNNNNNNGG	3 cut(s)	382, 1431, 2092
BseMI	GCAATG	1 cut(s)	1548
BseMII	CTCAG	4 cut(s)	1854, 1878, 2060, 2160
BseNI	ACTGG	1 cut(s)	134
BseXI	GCAGC	4 cut(s)	1525, 1846, 1915, 1918
BsgI	GTGCAG	1 cut(s)	286
BshFI	GGCC	2 cut(s)	1647, 1805
BshVI	ATCGAT	1 cut(s)	170
BsiHKAI	GWGCWC	3 cut(s)	934, 1318, 1704
BsiHKCI	CYCGRG	1 cut(s)	1317
BslFI	GGGAC	1 cut(s)	2066
BslI	CCNNNNNNNGG	3 cut(s)	382, 1431, 2092
BsmAI	GTCTC	4 cut(s)	228, 703, 1311, 1876
BsmFI	GGGAC	1 cut(s)	2066
BsmI	GAATGC	3 cut(s)	209, 1408, 1891
BsnI	GGCC	2 cut(s)	1647, 1805
Bso31I	GGTCTC	2 cut(s)	703, 1876
BsoBI	CYCGRG	1 cut(s)	1317
Bsp119I	TTCGAA	1 cut(s)	1093
Bsp1286I	GDGCHC	3 cut(s)	934, 1318, 1704
Bsp143I	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
Bsp19I	CCATGG	4 cut(s)	74, 424, 1596, 1831
BspACI	CCGC	1 cut(s)	1226
BspANI	GGCC	2 cut(s)	1647, 1805
BspCNI	CTCAG	4 cut(s)	1855, 1879, 2061, 2159
BspDI	ATCGAT	1 cut(s)	170
BspLI	GGNNCC	2 cut(s)	387, 1024
BspPI	GGATC	2 cut(s)	569, 1227
BspT104I	TTCGAA	1 cut(s)	1093
BspTI	CTTAAG	1 cut(s)	596
BspTNI	GGTCTC	2 cut(s)	703, 1876
BsrBI	CCGCTC	1 cut(s)	1226
BsrDI	GCAATG	1 cut(s)	1548
BsrI	ACTGG	1 cut(s)	134
BssECI	CCNNGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
BssMI	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
BssT1I	CCWWGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
Bst2UI	CCWGG	2 cut(s)	1120, 2001
Bst4CI	ACNGT	1 cut(s)	837
Bst6I	CTCTTC	5 cut(s)	250, 289, 294, 499, 1551
BstAFI	CTTAAG	1 cut(s)	596
BstBAI	YACGTR	3 cut(s)	188, 1591, 1677
BstBI	TTCGAA	1 cut(s)	1093
BstC8I	GCNNGC	4 cut(s)	99, 1140, 1297, 1618
BstDEI	CTNAG	7 cut(s)	69, 1001, 1133, 1863, 1887, 2069, 2146
BstDSI	CCRYGG	4 cut(s)	74, 424, 1596, 1831
BstEII	GGTNACC	1 cut(s)	1486
BstF5I	GGATG	7 cut(s)	466, 733, 1299, 1486, 1671, 1779, 2101
BstKTI	GATC	8 cut(s)	564, 792, 1132, 1222, 1430, 1588, 1723, 1815
BstMAI	GTCTC	4 cut(s)	228, 703, 1311, 1876
BstMBI	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
BstMWI	GCNNNNNNNGC	4 cut(s)	1232, 1322, 1783, 1802
BstNI	CCWGG	2 cut(s)	1120, 2001
BstNSI	RCATGY	4 cut(s)	1142, 1420, 1620, 1924
BstPI	GGTNACC	1 cut(s)	1486
BstSCI	CCNGG	2 cut(s)	1118, 1999
BstSFI	CTRYAG	1 cut(s)	891
BstSNI	TACGTA	1 cut(s)	1677
BstV1I	GCAGC	4 cut(s)	1525, 1846, 1915, 1918
BstX2I	RGATCY	1 cut(s)	1129
BstYI	RGATCY	1 cut(s)	1129
Bsu15I	ATCGAT	1 cut(s)	170
BsuI	GTATCC	1 cut(s)	760
BsuRI	GGCC	2 cut(s)	1647, 1805
BsuTUI	ATCGAT	1 cut(s)	170
BtgI	CCRYGG	4 cut(s)	74, 424, 1596, 1831
BtrI	CACGTC	1 cut(s)	2020
BtsCI	GGATG	7 cut(s)	466, 733, 1299, 1486, 1671, 1779, 2101
BtsI	GCAGTG	1 cut(s)	1351
BtsIMutI	CAGTG	1 cut(s)	1351
Cac8I	GCNNGC	4 cut(s)	99, 1140, 1297, 1618
Cfr13I	GGNCC	1 cut(s)	1803
ClaI	ATCGAT	1 cut(s)	170
Csp6I	GTAC	4 cut(s)	252, 861, 1520, 1674
CviQI	GTAC	4 cut(s)	252, 861, 1520, 1674
DdeI	CTNAG	7 cut(s)	69, 1001, 1133, 1863, 1887, 2069, 2146
DpnI	GATC	8 cut(s)	563, 791, 1131, 1221, 1429, 1587, 1722, 1814
DpnII	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
Eam1104I	CTCTTC	5 cut(s)	250, 289, 294, 499, 1551
EarI	CTCTTC	5 cut(s)	250, 289, 294, 499, 1551
Eco105I	TACGTA	1 cut(s)	1677
Eco130I	CCWWGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
Eco31I	GGTCTC	2 cut(s)	703, 1876
Eco72I	CACGTG	1 cut(s)	188
Eco88I	CYCGRG	1 cut(s)	1317
Eco91I	GGTNACC	1 cut(s)	1486
EcoO65I	GGTNACC	1 cut(s)	1486
EcoRI	GAATTC	1 cut(s)	781
EcoRII	CCWGG	2 cut(s)	1118, 1999
EcoT14I	CCWWGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
EcoT22I	ATGCAT	2 cut(s)	1050, 1102
ErhI	CCWWGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
FalI	AAGNNNNNCTT	2 cut(s)	498, 530
FaqI	GGGAC	1 cut(s)	2066
FauNDI	CATATG	1 cut(s)	499
Fnu4HI	GCNGC	5 cut(s)	1539, 1860, 1929, 1932, 2157
FokI	GGATG	7 cut(s)	453, 740, 1286, 1493, 1678, 1786, 2108
Fsp4HI	GCNGC	5 cut(s)	1539, 1860, 1929, 1932, 2157
FspBI	CTAG	4 cut(s)	249, 660, 1952, 1956
GluI	GCNGC	5 cut(s)	1539, 1860, 1929, 1932, 2157
GsuI	CTGGAG	2 cut(s)	918, 956
HaeIII	GGCC	2 cut(s)	1647, 1805
HincII	GTYRAC	1 cut(s)	2017
HindII	GTYRAC	1 cut(s)	2017
HindIII	AAGCTT	2 cut(s)	412, 1233
HinfI	GANTC	6 cut(s)	60, 143, 155, 977, 1463, 2031
HphI	GGTGA	8 cut(s)	16, 152, 440, 620, 1394, 1538, 1681, 2036
Hpy166II	GTNNAC	3 cut(s)	332, 1414, 2017
Hpy188I	TCNGA	7 cut(s)	205, 215, 356, 1580, 1812, 1817, 2149
Hpy188III	TCNNGA	6 cut(s)	55, 365, 553, 935, 1629, 1768
Hpy8I	GTNNAC	3 cut(s)	332, 1414, 2017
Hpy99I	CGWCG	1 cut(s)	446
HpyAV	CCTTC	8 cut(s)	77, 185, 628, 1033, 1336, 1429, 1471, 2096
HpyCH4III	ACNGT	1 cut(s)	837
HpyCH4IV	ACGT	6 cut(s)	187, 254, 1369, 1590, 1676, 2019
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1232, 1322, 1783, 1802
HpyF3I	CTNAG	7 cut(s)	69, 1001, 1133, 1863, 1887, 2069, 2146
HpySE526I	ACGT	6 cut(s)	187, 254, 1369, 1590, 1676, 2019
Kzo9I	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
LmnI	GCTCC	5 cut(s)	240, 1022, 1699, 1817, 2002
Lsp1109I	GCAGC	4 cut(s)	1525, 1846, 1915, 1918
MaeI	CTAG	4 cut(s)	249, 660, 1952, 1956
MaeII	ACGT	6 cut(s)	187, 254, 1369, 1590, 1676, 2019
MaeIII	GTNAC	5 cut(s)	397, 1285, 1486, 1591, 1898
MalI	GATC	8 cut(s)	563, 791, 1131, 1221, 1429, 1587, 1722, 1814
MbiI	CCGCTC	1 cut(s)	1226
MboI	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
MboII	GAAGA	8 cut(s)	237, 276, 281, 486, 1002, 1178, 1322, 1568
MfeI	CAATTG	1 cut(s)	1290
MflI	RGATCY	1 cut(s)	1129
MhlI	GDGCHC	3 cut(s)	934, 1318, 1704
MlyI	GAGTC	1 cut(s)	971
MmeI	TCCRAC	1 cut(s)	1922
Mph1103I	ATGCAT	2 cut(s)	1050, 1102
MroXI	GAANNNNTTC	1 cut(s)	39
MslI	CAYNNNNRTG	2 cut(s)	429, 1830
MspA1I	CMGCKG	1 cut(s)	973
MspCI	CTTAAG	1 cut(s)	596
MspR9I	CCNGG	2 cut(s)	1120, 2001
MunI	CAATTG	1 cut(s)	1290
Mva1269I	GAATGC	3 cut(s)	209, 1408, 1891
MvaI	CCWGG	2 cut(s)	1120, 2001
MwoI	GCNNNNNNNGC	4 cut(s)	1232, 1322, 1783, 1802
NcoI	CCATGG	4 cut(s)	74, 424, 1596, 1831
NdeI	CATATG	1 cut(s)	499
NdeII	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
NlaIV	GGNNCC	2 cut(s)	387, 1024
NmuCI	GTSAC	1 cut(s)	397
NsiI	ATGCAT	2 cut(s)	1050, 1102
NspI	RCATGY	4 cut(s)	1142, 1420, 1620, 1924
NspV	TTCGAA	1 cut(s)	1093
PaeI	GCATGC	2 cut(s)	1142, 1620
PciI	ACATGT	2 cut(s)	1416, 1920
PctI	GAATGC	3 cut(s)	209, 1408, 1891
PdmI	GAANNNNTTC	1 cut(s)	39
PfeI	GAWTC	5 cut(s)	60, 143, 155, 1463, 2031
PfoI	TCCNGGA	1 cut(s)	1999
PkrI	GCNGC	5 cut(s)	1540, 1861, 1930, 1933, 2158
PleI	GAGTC	1 cut(s)	971
PmaCI	CACGTG	1 cut(s)	188
PmlI	CACGTG	1 cut(s)	188
PpsI	GAGTC	1 cut(s)	971
Ppu21I	YACGTR	3 cut(s)	188, 1591, 1677
PscI	ACATGT	2 cut(s)	1416, 1920
PshBI	ATTAAT	1 cut(s)	1103
PsiI	TTATAA	1 cut(s)	878
Psp6I	CCWGG	2 cut(s)	1118, 1999
PspCI	CACGTG	1 cut(s)	188
PspEI	GGTNACC	1 cut(s)	1486
PspGI	CCWGG	2 cut(s)	1118, 1999
PspN4I	GGNNCC	2 cut(s)	387, 1024
PspPI	GGNCC	1 cut(s)	1803
PsrI	GAACNNNNNNTAC	2 cut(s)	114, 146
PsuI	RGATCY	1 cut(s)	1129
PvuII	CAGCTG	1 cut(s)	973
RsaI	GTAC	4 cut(s)	253, 862, 1521, 1675
RsaNI	GTAC	4 cut(s)	252, 861, 1520, 1674
RseI	CAYNNNNRTG	2 cut(s)	429, 1830
SatI	GCNGC	5 cut(s)	1539, 1860, 1929, 1932, 2157
Sau3AI	GATC	8 cut(s)	561, 789, 1129, 1219, 1427, 1585, 1720, 1812
Sau96I	GGNCC	1 cut(s)	1803
SchI	GAGTC	1 cut(s)	971
ScrFI	CCNGG	2 cut(s)	1120, 2001
SduI	GDGCHC	3 cut(s)	934, 1318, 1704
SfcI	CTRYAG	1 cut(s)	891
SfuI	TTCGAA	1 cut(s)	1093
SmiMI	CAYNNNNRTG	2 cut(s)	429, 1830
SmlI	CTYRAG	3 cut(s)	409, 596, 907
SmoI	CTYRAG	3 cut(s)	409, 596, 907
SnaBI	TACGTA	1 cut(s)	1677
SphI	GCATGC	2 cut(s)	1142, 1620
SsiI	CCGC	1 cut(s)	1226
SspMI	CTAG	4 cut(s)	249, 660, 1952, 1956
StyD4I	CCNGG	2 cut(s)	1118, 1999
StyI	CCWWGG	6 cut(s)	74, 424, 476, 1596, 1642, 1831
TaaI	ACNGT	1 cut(s)	837
TaiI	ACGT	6 cut(s)	190, 257, 1372, 1593, 1679, 2022
TaqI	TCGA	4 cut(s)	170, 1093, 1222, 1461
TatI	WGTACW	1 cut(s)	1519
TfiI	GAWTC	5 cut(s)	60, 143, 155, 1463, 2031
TscAI	CASTG	1 cut(s)	1358
TseFI	GTSAC	1 cut(s)	397
TseI	GCWGC	5 cut(s)	1538, 1859, 1928, 1931, 2156
Tsp45I	GTSAC	1 cut(s)	397
TspRI	CASTG	1 cut(s)	1358
Vha464I	CTTAAG	1 cut(s)	596
VspI	ATTAAT	1 cut(s)	1103
XapI	RAATTY	8 cut(s)	451, 481, 673, 781, 844, 1346, 1650, 2079
XceI	RCATGY	4 cut(s)	1142, 1420, 1620, 1924
XmnI	GAANNNNTTC	1 cut(s)	39
XspI	CTAG	4 cut(s)	249, 660, 1952, 1956
Zsp2I	ATGCAT	2 cut(s)	1050, 1102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.