Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006600

Physical Location & Seq

Genomic Coordinates Reverse (-)

17221259 .. 17224206

Gene Structure 2948 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001540

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGTTGCAGATTCGGGCAAAACCATGCGATCAGAGATTCATACCTAAGACATGGAAAGAAGGTATCAAACAGCTCGAGAAACCATCATCTATTTTAGAGCCGAGATTAACAGTTGGTGATTCTATGATAGATTCTCTTCTTGCATCCATTAAGACTTATGCACGTGAAGGACATCTATCAGAAGCATTCAAAAGCCTGTCTCTTATTAAGCTCCATGCCTCTTCTAGTACGTCTTGTGATGCAGTCTTGCATTCCATCTCTTCTCTTCTTTTCTCGTGCACCAACGATAAATCATTCCCACAGGGTAAACAGCTTCACGCACACATTATCAGATTGGGTCTTGAACAACACCCCATTTTGGTCCCCAAGCTTGTCACATTTTATTCAAGCTTTAGTTCCCATGTTGATGCTCATATTGTCGTTGAGAATTCCAATATATTGCATCCTCTACCTTGGAATTTGCTCATCTCTTCGTATGTTAAAAATGAACTTCTGGATGAGGCTCTCGCTACCTATGAACAAATGGTCAATAAGGGGATTAGACCGGATTGTTTTACTTATCCATCTGTTCTCAAGGCTTGTGGTGAGAAGTTGGATATAGGTTTTGGGAAGGAGGTGCATAAGTCCATTGATGCTAGTTGTCAGGAGTGGAATTTGTTTGTACATAATTCATTGGTCTCCATGTATGGAAAGTTTGGGCTTGTGGATGTTGCTCGGCAGTTGTTTGACATAATGCCCCAAAGGGATATAATTTCTTGGAATTCAATGATCTCGTGTTATGCCTCCAAAGGTATGTGGAATGAAGCATTTGAGCTGTTTGGAAAATTGCAGATGGAGGGTACTGAAGTAAGTATTATAACTTGGAATACCATAGCTGGAGGTTGCTTGAGAACAGGAAATATAAAGGGTGCTCTGGAGTTGCTTTCTCAAATGAGAGTTGGTGGTATTCAACTGGACTCAGTGGCATTGACCGTTGGGCTTAGTGCTTCTTCCCACATTGGAGCTATTAAGTTAGGGAAGGAGATGCATGGTTCTGCAATTCGTACTTGTTGTGATGGGTATGACAATGTCAGAAATGCATTAATTACAATGTATTCCAGGTGCAAAGATCTAAGTCATGCCTATACTTTGTTTCAATCGATAGAAGATAGGAGTGTAGTCACTTGGAACTCCATGATTTCTGGTTATTCCCACATGGATCGAGCGGAGGAAGCTTCATTCATATTTAGAGAGATGTTATGTTCTGGAGTTGAACCCAATTACGTTACAATTGCCAGCATCCTGCCTCTTTGTGCTCGGGTAGCAAATCTTCAACATGGGAAGGAATTTCACTGCTACATTACAAAACGTGTTGTGTTTGATGATTATTTATTGCTGTGGAATGCTCTTGTGGACATGTATGCCAGATCAGGCAGGGTTATAGAAGCTAAAAGAGTATTTGATTCAATGAATAAGAAGGATGAGGTAACTTATACTTCCATGATTGCAGGATATGGAGTACAGGGTGAGGGAAAAGCTGCATTGAAGTTATTTGAAGAGATGAATAGTTTAAACATCCAACCAGATCATGTAACCATGGTTTCCATTTTATCAGCATGTAGCCATTCAGGACTTGTAATCCAAGGCCAAATTCTATTCGAAAGGATGGTTGGTATGTATAGTATAACTCCCGATTTGGAGCACTATGCTTGCATGGTTGATCTCTATGGGAGGGCTGGCACCTCACCCTATTATGCTTCATTCACTTCCACCAGCTTCTCAAATTTTGCAAACCCCAACGCAGAGGCTTCCATCTTTCAGGTCCTAACAGTCAAAGCAGGTTACAATTTTTTGGGTGAAGGAGACTCAGCCCTCACCTTTAGAATTGTAGCACGTACTTTTGTAGTATCTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

632

Amino Acids

70.15

Weight (kDa)

6.47

Isoelectric Point (pI)

40.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	152 - 194	1.7e-10	PPR repeat family
PPR	PF01535	152 - 180	4.6e-06	PPR repeat
PPR_2	PF13041	248 - 295	4.2e-09	PPR repeat family
PPR	PF01535	251 - 280	5.7e-08	PPR repeat
PPR_2	PF13041	284 - 325	9e-06	PPR repeat family
PPR_2	PF13041	385 - 431	1.2e-09	PPR repeat family
PPR	PF01535	387 - 417	9.7e-08	PPR repeat
PPR_2	PF13041	487 - 534	5.1e-12	PPR repeat family
PPR	PF01535	489 - 518	8.1e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22830 AT1G22830 AT1G71490
fragaria_vesca	FvH4_5g32370
malus_domestica	MD04G1056500.v1.1 MD15G1404200.v1.1
prunus_persica	Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1
pyrus_communis	pycom04g04960 pycom15g36160
rosa_chinensis	RchiOBHm_Chr7g0228861
rosa_laevigata	RLG00000001540 RLG00000002151 RLG00000002152
rosa_multiflora	Rmu_co8395259.1_g000001 Rmu_sc0004517.1_g000002 Rmu_sc0011218.1_g000005 Rmu_sc0013945.1_g000009
rosa_rugosa	Rorug07G0252400 Rorug07G0252500
rosa_samantha	Rh7AG405700 Rh7BG385000 Rh7CG423300 Rh7DG399700
rosa_wichuraiana	Rw7G033610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	857
Acc36I	ACCTGC	1 cut(s)	1808
AccB1I	GGYRCC	1 cut(s)	1718
AccBSI	CCGCTC	1 cut(s)	1205
AciI	CCGC	1 cut(s)	1205
AclWI	GGATC	1 cut(s)	1206
AcsI	RAATTY	7 cut(s)	427, 457, 652, 760, 1325, 1629, 1762
AcuI	CTGAAG	1 cut(s)	864
AcvI	CACGTG	1 cut(s)	164
AfaI	GTAC	6 cut(s)	229, 663, 841, 1045, 1500, 1876
AfiI	CCNNNNNNNGG	1 cut(s)	358
AflIII	ACRYGT	2 cut(s)	1348, 1395
AjnI	CCWGG	1 cut(s)	1097
AjuI	GAANNNNNNNTTGG	4 cut(s)	1614, 1632, 1646, 1664
Alw21I	GWGCWC	4 cut(s)	281, 913, 1297, 1683
Alw26I	GTCTC	3 cut(s)	204, 682, 1836
Alw44I	GTGCAC	1 cut(s)	277
AlwI	GGATC	1 cut(s)	1206
Ama87I	CYCGRG	2 cut(s)	74, 1296
AoxI	GGCC	1 cut(s)	1624
ApaLI	GTGCAC	1 cut(s)	277
ApeKI	GCWGC	1 cut(s)	1517
ApoI	RAATTY	7 cut(s)	427, 457, 652, 760, 1325, 1629, 1762
AseI	ATTAAT	1 cut(s)	1082
AspS9I	GGNCC	2 cut(s)	361, 1801
AsuHPI	GGTGA	6 cut(s)	128, 596, 1517, 1716, 1846, 1847
AsuII	TTCGAA	1 cut(s)	1638
AvaI	CYCGRG	2 cut(s)	74, 1296
AvaII	GGWCC	2 cut(s)	361, 1801
BaeGI	GKGCMC	1 cut(s)	281
BaeI	ACNNNNGTAYC	2 cut(s)	831, 864
BanI	GGYRCC	1 cut(s)	1718
BarI	GAAGNNNNNNTAC	2 cut(s)	1293, 1325
BauI	CACGAG	2 cut(s)	274, 772
BbrPI	CACGTG	1 cut(s)	164
Bbv12I	GWGCWC	4 cut(s)	281, 913, 1297, 1683
BbvI	GCAGC	1 cut(s)	1504
BccI	CCATC	7 cut(s)	91, 263, 571, 826, 1049, 1639, 1799
BciT130I	CCWGG	1 cut(s)	1099
BcoDI	GTCTC	3 cut(s)	204, 682, 1836
BfaI	CTAG	2 cut(s)	225, 636
BfuAI	ACCTGC	1 cut(s)	1808
BglII	AGATCT	1 cut(s)	1108
BisI	GCNGC	1 cut(s)	1518
BlsI	GCNGC	1 cut(s)	1519
Bme1390I	CCNGG	1 cut(s)	1099
Bme18I	GGWCC	2 cut(s)	361, 1801
BmeT110I	CYCGRG	2 cut(s)	74, 1296
BmgT120I	GGNCC	2 cut(s)	361, 1801
BmiI	GGNNCC	2 cut(s)	363, 1720
BmrFI	CCNGG	1 cut(s)	1099
BmsI	GCATC	7 cut(s)	152, 229, 397, 451, 622, 1014, 1287
BpmI	CTGGAG	3 cut(s)	897, 935, 1266
Bpu14I	TTCGAA	1 cut(s)	1638
BpuEI	CTTGAG	2 cut(s)	557, 907
Bsa29I	ATCGAT	1 cut(s)	1139
BsaAI	YACGTR	2 cut(s)	164, 1874
BsaI	GGTCTC	1 cut(s)	682
BsaJI	CCNNGG	3 cut(s)	452, 1575, 1621
BsaWI	WCCGGW	1 cut(s)	544
Bsc4I	CCNNNNNNNGG	1 cut(s)	358
Bse1I	ACTGG	1 cut(s)	957
BseBI	CCWGG	1 cut(s)	1099
BseCI	ATCGAT	1 cut(s)	1139
BseDI	CCNNGG	3 cut(s)	452, 1575, 1621
BseGI	GGATG	8 cut(s)	143, 442, 502, 712, 1278, 1465, 1554, 1650
BseLI	CCNNNNNNNGG	1 cut(s)	358
BseMII	CTCAG	2 cut(s)	972, 1860
BseNI	ACTGG	1 cut(s)	957
BseSI	GKGCMC	1 cut(s)	281
BseXI	GCAGC	1 cut(s)	1504
BshFI	GGCC	1 cut(s)	1626
BshNI	GGYRCC	1 cut(s)	1718
BshVI	ATCGAT	1 cut(s)	1139
BsiHKAI	GWGCWC	4 cut(s)	281, 913, 1297, 1683
BsiHKCI	CYCGRG	2 cut(s)	74, 1296
BsiSI	CCGG	1 cut(s)	545
BslFI	GGGAC	1 cut(s)	347
BslI	CCNNNNNNNGG	1 cut(s)	358
BsmAI	GTCTC	3 cut(s)	204, 682, 1836
BsmFI	GGGAC	1 cut(s)	347
BsmI	GAATGC	3 cut(s)	185, 250, 1387
BsnI	GGCC	1 cut(s)	1626
Bso31I	GGTCTC	1 cut(s)	682
BsoBI	CYCGRG	2 cut(s)	74, 1296
Bsp119I	TTCGAA	1 cut(s)	1638
Bsp1286I	GDGCHC	4 cut(s)	281, 913, 1297, 1683
Bsp1407I	TGTACA	1 cut(s)	661
Bsp143I	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
Bsp19I	CCATGG	1 cut(s)	1575
BspACI	CCGC	1 cut(s)	1205
BspANI	GGCC	1 cut(s)	1626
BspCNI	CTCAG	2 cut(s)	971, 1859
BspDI	ATCGAT	1 cut(s)	1139
BspLI	GGNNCC	2 cut(s)	363, 1720
BspMI	ACCTGC	1 cut(s)	1808
BspPI	GGATC	1 cut(s)	1206
BspT104I	TTCGAA	1 cut(s)	1638
BspT107I	GGYRCC	1 cut(s)	1718
BspTNI	GGTCTC	1 cut(s)	682
BsrBI	CCGCTC	1 cut(s)	1205
BsrGI	TGTACA	1 cut(s)	661
BsrI	ACTGG	1 cut(s)	957
BssECI	CCNNGG	3 cut(s)	452, 1575, 1621
BssMI	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
BssSI	CACGAG	2 cut(s)	274, 772
BssT1I	CCWWGG	3 cut(s)	452, 1575, 1621
Bst2BI	CACGAG	2 cut(s)	274, 772
Bst2UI	CCWGG	1 cut(s)	1099
Bst4CI	ACNGT	3 cut(s)	112, 973, 1810
Bst6I	CTCTTC	6 cut(s)	141, 226, 265, 270, 475, 1530
BstAUI	TGTACA	1 cut(s)	661
BstBAI	YACGTR	2 cut(s)	164, 1874
BstBI	TTCGAA	1 cut(s)	1638
BstC8I	GCNNGC	3 cut(s)	1276, 1690, 1717
BstDEI	CTNAG	5 cut(s)	45, 958, 980, 1112, 1846
BstDSI	CCRYGG	1 cut(s)	1575
BstF5I	GGATG	8 cut(s)	143, 442, 502, 712, 1278, 1465, 1554, 1650
BstKTI	GATC	7 cut(s)	31, 771, 1111, 1201, 1409, 1567, 1702
BstMAI	GTCTC	3 cut(s)	204, 682, 1836
BstMBI	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
BstMWI	GCNNNNNNNGC	2 cut(s)	1211, 1301
BstNI	CCWGG	1 cut(s)	1099
BstNSI	RCATGY	2 cut(s)	1399, 1599
BstSCI	CCNGG	1 cut(s)	1097
BstSLI	GKGCMC	1 cut(s)	281
BstV1I	GCAGC	1 cut(s)	1504
BstX2I	RGATCY	1 cut(s)	1108
BstYI	RGATCY	1 cut(s)	1108
Bsu15I	ATCGAT	1 cut(s)	1139
BsuRI	GGCC	1 cut(s)	1626
BsuTUI	ATCGAT	1 cut(s)	1139
BtgI	CCRYGG	1 cut(s)	1575
BtsCI	GGATG	8 cut(s)	143, 442, 502, 712, 1278, 1465, 1554, 1650
BtsI	GCAGTG	1 cut(s)	1330
BtsIMutI	CAGTG	2 cut(s)	966, 1330
BveI	ACCTGC	1 cut(s)	1808
Cac8I	GCNNGC	3 cut(s)	1276, 1690, 1717
Cfr13I	GGNCC	2 cut(s)	361, 1801
ClaI	ATCGAT	1 cut(s)	1139
Csp6I	GTAC	6 cut(s)	228, 662, 840, 1044, 1499, 1875
CspCI	CAANNNNNGTGG	2 cut(s)	562, 597
CviQI	GTAC	6 cut(s)	228, 662, 840, 1044, 1499, 1875
DdeI	CTNAG	5 cut(s)	45, 958, 980, 1112, 1846
DpnI	GATC	7 cut(s)	30, 770, 1110, 1200, 1408, 1566, 1701
DpnII	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
DraI	TTTAAA	1 cut(s)	1551
Eam1104I	CTCTTC	6 cut(s)	141, 226, 265, 270, 475, 1530
EarI	CTCTTC	6 cut(s)	141, 226, 265, 270, 475, 1530
Eco130I	CCWWGG	3 cut(s)	452, 1575, 1621
Eco31I	GGTCTC	1 cut(s)	682
Eco47I	GGWCC	2 cut(s)	361, 1801
Eco57I	CTGAAG	1 cut(s)	864
Eco72I	CACGTG	1 cut(s)	164
Eco88I	CYCGRG	2 cut(s)	74, 1296
EcoO109I	RGGNCCY	1 cut(s)	1801
EcoRI	GAATTC	2 cut(s)	427, 760
EcoRII	CCWGG	1 cut(s)	1097
EcoT14I	CCWWGG	3 cut(s)	452, 1575, 1621
EcoT22I	ATGCAT	2 cut(s)	1029, 1081
ErhI	CCWWGG	3 cut(s)	452, 1575, 1621
FaqI	GGGAC	1 cut(s)	347
Fnu4HI	GCNGC	1 cut(s)	1518
FokI	GGATG	8 cut(s)	130, 429, 509, 719, 1265, 1472, 1541, 1657
Fsp4HI	GCNGC	1 cut(s)	1518
FspBI	CTAG	2 cut(s)	225, 636
GluI	GCNGC	1 cut(s)	1518
GsuI	CTGGAG	3 cut(s)	897, 935, 1266
HaeIII	GGCC	1 cut(s)	1626
HapII	CCGG	1 cut(s)	545
HindIII	AAGCTT	3 cut(s)	368, 388, 1212
HinfI	GANTC	7 cut(s)	10, 36, 119, 131, 956, 1442, 1844
HpaII	CCGG	1 cut(s)	545
HphI	GGTGA	6 cut(s)	128, 596, 1517, 1716, 1846, 1847
Hpy166II	GTNNAC	3 cut(s)	279, 308, 1393
Hpy188I	TCNGA	4 cut(s)	33, 181, 332, 1073
Hpy188III	TCNNGA	8 cut(s)	76, 341, 494, 644, 914, 1245, 1608, 1670
Hpy8I	GTNNAC	3 cut(s)	279, 308, 1393
HpyAV	CCTTC	7 cut(s)	53, 161, 604, 1012, 1315, 1450, 1832
HpyCH4III	ACNGT	3 cut(s)	112, 973, 1810
HpyCH4IV	ACGT	5 cut(s)	163, 230, 1263, 1348, 1873
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1211, 1301
HpyF3I	CTNAG	5 cut(s)	45, 958, 980, 1112, 1846
HpySE526I	ACGT	5 cut(s)	163, 230, 1263, 1348, 1873
Kzo9I	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
LmnI	GCTCC	3 cut(s)	216, 1001, 1678
Lsp1109I	GCAGC	1 cut(s)	1504
LweI	GCATC	7 cut(s)	152, 229, 397, 451, 622, 1014, 1287
MaeI	CTAG	2 cut(s)	225, 636
MaeII	ACGT	5 cut(s)	163, 230, 1263, 1348, 1873
MaeIII	GTNAC	6 cut(s)	373, 1159, 1264, 1465, 1570, 1820
MalI	GATC	7 cut(s)	30, 770, 1110, 1200, 1408, 1566, 1701
MbiI	CCGCTC	1 cut(s)	1205
MboI	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
MfeI	CAATTG	1 cut(s)	1269
MflI	RGATCY	1 cut(s)	1108
MhlI	GDGCHC	4 cut(s)	281, 913, 1297, 1683
MlyI	GAGTC	2 cut(s)	950, 1838
MmeI	TCCRAC	2 cut(s)	573, 1582
Mph1103I	ATGCAT	2 cut(s)	1029, 1081
MseI	TTAA	7 cut(s)	107, 150, 207, 480, 1008, 1082, 1550
MslI	CAYNNNNRTG	1 cut(s)	405
MspI	CCGG	1 cut(s)	545
MspR9I	CCNGG	1 cut(s)	1099
MssI	GTTTAAAC	1 cut(s)	1551
MunI	CAATTG	1 cut(s)	1269
Mva1269I	GAATGC	3 cut(s)	185, 250, 1387
MvaI	CCWGG	1 cut(s)	1099
MwoI	GCNNNNNNNGC	2 cut(s)	1211, 1301
NcoI	CCATGG	1 cut(s)	1575
NdeII	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
NlaIV	GGNNCC	2 cut(s)	363, 1720
NmeAIII	GCCGAG	2 cut(s)	126, 694
NmuCI	GTSAC	2 cut(s)	373, 1159
NsiI	ATGCAT	2 cut(s)	1029, 1081
NspI	RCATGY	2 cut(s)	1399, 1599
NspV	TTCGAA	1 cut(s)	1638
PaeR7I	CTCGAG	1 cut(s)	74
PciI	ACATGT	1 cut(s)	1395
PctI	GAATGC	3 cut(s)	185, 250, 1387
PfeI	GAWTC	5 cut(s)	10, 36, 119, 131, 1442
PflFI	GACNNNGTC	1 cut(s)	1067
PkrI	GCNGC	1 cut(s)	1519
PleI	GAGTC	2 cut(s)	950, 1838
PmaCI	CACGTG	1 cut(s)	164
PmeI	GTTTAAAC	1 cut(s)	1551
PmlI	CACGTG	1 cut(s)	164
PpsI	GAGTC	2 cut(s)	950, 1838
Ppu21I	YACGTR	2 cut(s)	164, 1874
PpuMI	RGGWCCY	1 cut(s)	1801
PscI	ACATGT	1 cut(s)	1395
PshBI	ATTAAT	1 cut(s)	1082
PsiI	TTATAA	1 cut(s)	857
Psp5II	RGGWCCY	1 cut(s)	1801
Psp6I	CCWGG	1 cut(s)	1097
PspCI	CACGTG	1 cut(s)	164
PspGI	CCWGG	1 cut(s)	1097
PspN4I	GGNNCC	2 cut(s)	363, 1720
PspPI	GGNCC	2 cut(s)	361, 1801
PspPPI	RGGWCCY	1 cut(s)	1801
PsuI	RGATCY	1 cut(s)	1108
PsyI	GACNNNGTC	1 cut(s)	1067
RsaI	GTAC	6 cut(s)	229, 663, 841, 1045, 1500, 1876
RsaNI	GTAC	6 cut(s)	228, 662, 840, 1044, 1499, 1875
RseI	CAYNNNNRTG	1 cut(s)	405
SaqAI	TTAA	7 cut(s)	107, 150, 207, 480, 1008, 1082, 1550
SatI	GCNGC	1 cut(s)	1518
Sau3AI	GATC	7 cut(s)	28, 768, 1108, 1198, 1406, 1564, 1699
Sau96I	GGNCC	2 cut(s)	361, 1801
SchI	GAGTC	2 cut(s)	950, 1838
ScrFI	CCNGG	1 cut(s)	1099
SduI	GDGCHC	4 cut(s)	281, 913, 1297, 1683
SfaNI	GCATC	7 cut(s)	152, 229, 397, 451, 622, 1014, 1287
Sfr274I	CTCGAG	1 cut(s)	74
SfuI	TTCGAA	1 cut(s)	1638
SinI	GGWCC	2 cut(s)	361, 1801
SlaI	CTCGAG	1 cut(s)	74
SmiMI	CAYNNNNRTG	1 cut(s)	405
SmlI	CTYRAG	3 cut(s)	74, 572, 886
SmoI	CTYRAG	3 cut(s)	74, 572, 886
SsiI	CCGC	1 cut(s)	1205
SspMI	CTAG	2 cut(s)	225, 636
StyD4I	CCNGG	1 cut(s)	1097
StyI	CCWWGG	3 cut(s)	452, 1575, 1621
TaaI	ACNGT	3 cut(s)	112, 973, 1810
TaiI	ACGT	5 cut(s)	166, 233, 1266, 1351, 1876
TaqI	TCGA	4 cut(s)	75, 1139, 1201, 1638
TatI	WGTACW	2 cut(s)	661, 1498
TfiI	GAWTC	5 cut(s)	10, 36, 119, 131, 1442
Tru1I	TTAA	7 cut(s)	107, 150, 207, 480, 1008, 1082, 1550
Tru9I	TTAA	7 cut(s)	107, 150, 207, 480, 1008, 1082, 1550
TscAI	CASTG	2 cut(s)	966, 1337
TseFI	GTSAC	2 cut(s)	373, 1159
TseI	GCWGC	1 cut(s)	1517
Tsp45I	GTSAC	2 cut(s)	373, 1159
TspRI	CASTG	2 cut(s)	966, 1337
Tth111I	GACNNNGTC	1 cut(s)	1067
VneI	GTGCAC	1 cut(s)	277
VpaK11BI	GGWCC	2 cut(s)	361, 1801
VspI	ATTAAT	1 cut(s)	1082
XapI	RAATTY	7 cut(s)	427, 457, 652, 760, 1325, 1629, 1762
XceI	RCATGY	2 cut(s)	1399, 1599
XhoI	CTCGAG	1 cut(s)	74
XspI	CTAG	2 cut(s)	225, 636
Zsp2I	ATGCAT	2 cut(s)	1029, 1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.