Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006600

Physical Location & Seq

Genomic Coordinates Forward (+)

52155787 .. 52159049

Gene Structure 3263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20500

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGCCATCATCTTATCCTCATTTCATCCCAAAGGAACTTTTTGCATCCCAAATCCAGAGATTCATACCTAAGACATGGAAAGAAGGTATCAAACAGCTCGAGAAACCATCATCTATTTTAGAGCCAAGTTTACCAGTTGGTGATTCTATGATAGATTCTCTTCTTGCATCCATTAAGACTTATGCACGTGAAGGACATCTATCAGAAGCATTCAAAAGCCTGTCTCTTATTAAGTTCCATGCCTCTTCTAGTACATCTTGTGATGCAGTCTTACATTCCATCTCTTCTCTTCTTTTCTCGTGCACCAACCATAAATCATTCCCACAGGGTAAACAGCTTCATGCACACATTATCAGATTGGGTCTTGAACAACACCCCATTTTGGTCCCCAAGCTTGTCACATTTTATTCGAGCTTTAATTCCCATATTGATGCTCATATTGTTGTTGAGAATTCCAATATATTGCATCCTCTACCTTGGAATTTGCTCATCTCTTCATATGTTAAAAATGAACTTCTGGATGAGGCTCTCACTACCTATGAACATATGGTCAATAAGGGGATTAGACCAGATTGTTTTACTTATCCATCTGTTCTCAAGGCTTGTGGTGAGAAGTTGGATATAGGTTTTGGGAAGGAGGTGCATAAGTCCATTGATGCTAGTTGTCAGGAGTGGAATTTGTTTGTGCATAATTCATTGGTCTCCATGTATGGAAAGTTTGGGCTTGTGGATGTTGCTCGTCAGTTGTTTGACATAATGCCCCAAAGGGATATAATTTCTTGGAATTCAATGATCTCCTGTTATGCCTCCAAAGGTATGTGGAATGAAGCATTTGAGCTGTTTGGAAAATTGCAGATGGAGGGTACTGAAGTAAGTATTATAACTTGGAATACCATAGCTGGAGGTTGCTTGAGAACAGGAAATATAAAGGGTGCTCTGGAGTTGCTTTCTCAAATGAGAGTTGGTGGTATTCAACTGGACTCAGTGGCATTTACGGTTGGGCTTAGTGCTTCTTCCCACATTGGAGCTATTAAGTTAGGGAAGGAGATGCATGGTTCTGCAATTCGTACTTGTTGTGATGGGTATGACAATGTCAGAAATGCATTAATTACAATGTATTCCAGGTGCAAAGATCTAAGTCATGCCTATACTTTGTTTCAATCGATAGAAGATAGGAGTATAGTCACTTGGAACTCCATTATTTCTGGTTATTCCCACATGGATCGAGCGGAGGAAGCTTCATTCATATTTAGAGAGATGTTGTGTTCTGGAATTGAACCCAATTACGTTACGATTGCCAGCATCCTGCCTCTTTGTGCTCGGGTTGCAAATCTTCAACATGGAAAGGAATTTCACTGCTACATTACAAAACGTGTTGTGTTTGATGATTATTTATTGCTGTGGAATGCTCTTGTGGACATGTATGCCAGATCAGGCAGGGTTATAGAAGCTAAAAGAGTATTTGATTCAATGAATAAGAAGGATGAGGTAACTTATACTTCCATGATTGCAGGATATGGAGTACAGGGTGAGGGAAAAGCTGCATTGAAGTTATTTGAAGAGATGAATAGTTTAAACATCCAACCAGATCATGTAACCATGGTTTCCATTTTATCAGCATGTAGCCATTCAGGACTTGTAATCCAAGGCCAAATTCTATTCGAAAGGATGGTGAGTATGTATGGTATAACTCCCGATTTGGAGCACTATGCTTGCATGGTTGATCTCTATGGGAGGGCTGGTCTATTACATAATGCAAAAGATATTATCAAAAGGATGCCTTACAAGCCAACTTCTGCCATGTGGGCCACTCTGATTGGAGCTTGTAGGATCCATGGAAATACAGAGATAGGGGAATGGGCAGCTGAGATGCTATTACAAATGAGACCTGAGAATTCTGGGTACTATGTCTTAATTGCTAACATGTATGCTGCTGCTGGTAGTTGGAACAACCTAGCTAGAGTGAGGACTTTCATGAGGGACTTGGGTGTAAGGAAGGCTCCTGGCTGCGCTTGGGTTGACGTGGGTGATGGATTCTCCCTCTTTTTGGTGGGGGACACCACAAATCAGCTGAGAAATGAAATTTACCTTTTGTTGGATGGATTAAATGAGCTGATGAAAGATGCTGATTATATTAGAGAGGATTTTAGTTCAGGTTATGAAGTTTTTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

724

Amino Acids

81.1

Weight (kDa)

6.21

Isoelectric Point (pI)

41.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	160 - 202	8.9e-10	PPR repeat family
PPR_2	PF13041	256 - 295	1e-06	PPR repeat family
PPR	PF01535	259 - 288	6.7e-08	PPR repeat
PPR_2	PF13041	292 - 333	1.2e-06	PPR repeat family
PPR_2	PF13041	393 - 439	4.4e-09	PPR repeat family
PPR	PF01535	395 - 425	7.7e-07	PPR repeat
PPR_2	PF13041	495 - 542	6e-12	PPR repeat family
PPR	PF01535	497 - 526	9.6e-07	PPR repeat
E_motif	PF20431	612 - 674	5.3e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22830 AT1G22830 AT1G71490
fragaria_vesca	FvH4_5g32370
malus_domestica	MD04G1056500.v1.1 MD15G1404200.v1.1
prunus_persica	Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1
pyrus_communis	pycom04g04960 pycom15g36160
rosa_chinensis	RchiOBHm_Chr7g0228861
rosa_laevigata	RLG00000001540 RLG00000002151 RLG00000002152
rosa_multiflora	Rmu_co8395259.1_g000001 Rmu_sc0004517.1_g000002 Rmu_sc0011218.1_g000005 Rmu_sc0013945.1_g000009
rosa_rugosa	Rorug07G0252400 Rorug07G0252500
rosa_samantha	Rh7AG405700 Rh7BG385000 Rh7CG423300 Rh7DG399700
rosa_wichuraiana	Rw7G033610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	881
AccBSI	CCGCTC	1 cut(s)	1229
AciI	CCGC	1 cut(s)	1229
AclWI	GGATC	3 cut(s)	1230, 1825, 1838
AcsI	RAATTY	8 cut(s)	451, 481, 676, 784, 1349, 1653, 1894, 2082
AcuI	CTGAAG	1 cut(s)	888
AcvI	CACGTG	1 cut(s)	188
AfaI	GTAC	5 cut(s)	253, 865, 1069, 1524, 1904
AfiI	CCNNNNNNNGG	3 cut(s)	382, 2047, 2095
AflIII	ACRYGT	3 cut(s)	1372, 1419, 1923
AjiI	CACGTC	1 cut(s)	2023
AjnI	CCWGG	2 cut(s)	1121, 2002
AjuI	GAANNNNNNNTTGG	2 cut(s)	1638, 1670
Alw21I	GWGCWC	4 cut(s)	305, 937, 1321, 1707
Alw26I	GTCTC	3 cut(s)	228, 706, 1879
Alw44I	GTGCAC	1 cut(s)	301
AlwI	GGATC	3 cut(s)	1230, 1825, 1838
Ama87I	CYCGRG	2 cut(s)	98, 1320
AoxI	GGCC	2 cut(s)	1648, 1806
ApaLI	GTGCAC	1 cut(s)	301
ApeKI	GCWGC	5 cut(s)	1541, 1862, 1931, 1934, 2007
ApoI	RAATTY	8 cut(s)	451, 481, 676, 784, 1349, 1653, 1894, 2082
AseI	ATTAAT	1 cut(s)	1106
AspLEI	GCGC	1 cut(s)	2012
AspS9I	GGNCC	2 cut(s)	385, 1806
AsuHPI	GGTGA	5 cut(s)	152, 620, 1541, 1684, 2039
AsuII	TTCGAA	1 cut(s)	1662
AvaI	CYCGRG	2 cut(s)	98, 1320
AvaII	GGWCC	1 cut(s)	385
BaeGI	GKGCMC	1 cut(s)	305
BaeI	ACNNNNGTAYC	2 cut(s)	855, 888
BamHI	GGATCC	1 cut(s)	1830
BauI	CACGAG	1 cut(s)	298
BbrPI	CACGTG	1 cut(s)	188
Bbv12I	GWGCWC	4 cut(s)	305, 937, 1321, 1707
BbvI	GCAGC	5 cut(s)	1528, 1874, 1918, 1921, 1994
BccI	CCATC	9 cut(s)	13, 115, 287, 595, 850, 1073, 1663, 2024, 2093
BciT130I	CCWGG	2 cut(s)	1123, 2004
BcoDI	GTCTC	3 cut(s)	228, 706, 1879
BfaI	CTAG	4 cut(s)	249, 660, 1955, 1959
BglI	GCCNNNNNGGC	1 cut(s)	1805
BglII	AGATCT	1 cut(s)	1132
BisI	GCNGC	5 cut(s)	1542, 1863, 1932, 1935, 2008
BlsI	GCNGC	5 cut(s)	1543, 1864, 1933, 1936, 2009
Bme1390I	CCNGG	2 cut(s)	1123, 2004
Bme18I	GGWCC	1 cut(s)	385
BmeT110I	CYCGRG	2 cut(s)	98, 1320
BmgBI	CACGTC	1 cut(s)	2023
BmgT120I	GGNCC	2 cut(s)	385, 1806
BmiI	GGNNCC	3 cut(s)	387, 1832, 2001
BmrFI	CCNGG	2 cut(s)	1123, 2004
BpmI	CTGGAG	2 cut(s)	921, 959
Bpu14I	TTCGAA	1 cut(s)	1662
BpuEI	CTTGAG	2 cut(s)	581, 931
Bsa29I	ATCGAT	1 cut(s)	1163
BsaAI	YACGTR	1 cut(s)	188
BsaI	GGTCTC	2 cut(s)	706, 1879
BsaJI	CCNNGG	4 cut(s)	476, 1599, 1645, 1834
BsaXI	ACNNNNNCTCC	2 cut(s)	1726, 1756
Bsc4I	CCNNNNNNNGG	3 cut(s)	382, 2047, 2095
Bse1I	ACTGG	2 cut(s)	134, 981
BseBI	CCWGG	2 cut(s)	1123, 2004
BseCI	ATCGAT	1 cut(s)	1163
BseDI	CCNNGG	4 cut(s)	476, 1599, 1645, 1834
BseLI	CCNNNNNNNGG	3 cut(s)	382, 2047, 2095
BseMII	CTCAG	4 cut(s)	996, 1857, 1881, 2063
BseNI	ACTGG	2 cut(s)	134, 981
BseSI	GKGCMC	1 cut(s)	305
BseXI	GCAGC	5 cut(s)	1528, 1874, 1918, 1921, 1994
BshFI	GGCC	2 cut(s)	1650, 1808
BshVI	ATCGAT	1 cut(s)	1163
BsiHKAI	GWGCWC	4 cut(s)	305, 937, 1321, 1707
BsiHKCI	CYCGRG	2 cut(s)	98, 1320
BslFI	GGGAC	3 cut(s)	371, 1994, 2069
BslI	CCNNNNNNNGG	3 cut(s)	382, 2047, 2095
BsmAI	GTCTC	3 cut(s)	228, 706, 1879
BsmFI	GGGAC	3 cut(s)	371, 1994, 2069
BsmI	GAATGC	2 cut(s)	209, 1411
BsnI	GGCC	2 cut(s)	1650, 1808
Bso31I	GGTCTC	2 cut(s)	706, 1879
BsoBI	CYCGRG	2 cut(s)	98, 1320
Bsp119I	TTCGAA	1 cut(s)	1662
Bsp1286I	GDGCHC	4 cut(s)	305, 937, 1321, 1707
Bsp143I	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
Bsp19I	CCATGG	2 cut(s)	1599, 1834
BspACI	CCGC	1 cut(s)	1229
BspANI	GGCC	2 cut(s)	1650, 1808
BspCNI	CTCAG	4 cut(s)	995, 1858, 1882, 2064
BspDI	ATCGAT	1 cut(s)	1163
BspHI	TCATGA	1 cut(s)	1974
BspLI	GGNNCC	3 cut(s)	387, 1832, 2001
BspPI	GGATC	3 cut(s)	1230, 1825, 1838
BspT104I	TTCGAA	1 cut(s)	1662
BspTNI	GGTCTC	2 cut(s)	706, 1879
BsrBI	CCGCTC	1 cut(s)	1229
BsrI	ACTGG	2 cut(s)	134, 981
BssECI	CCNNGG	4 cut(s)	476, 1599, 1645, 1834
BssMI	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
BssSI	CACGAG	1 cut(s)	298
BssT1I	CCWWGG	4 cut(s)	476, 1599, 1645, 1834
Bst2BI	CACGAG	1 cut(s)	298
Bst2UI	CCWGG	2 cut(s)	1123, 2004
Bst4CI	ACNGT	1 cut(s)	997
Bst6I	CTCTTC	6 cut(s)	165, 250, 289, 294, 499, 1554
BstBAI	YACGTR	1 cut(s)	188
BstBI	TTCGAA	1 cut(s)	1662
BstC8I	GCNNGC	2 cut(s)	1300, 1714
BstDEI	CTNAG	7 cut(s)	69, 982, 1004, 1136, 1866, 1890, 2072
BstDSI	CCRYGG	2 cut(s)	1599, 1834
BstHHI	GCGC	1 cut(s)	2012
BstKTI	GATC	7 cut(s)	795, 1135, 1225, 1433, 1591, 1726, 1833
BstMAI	GTCTC	3 cut(s)	228, 706, 1879
BstMBI	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
BstMWI	GCNNNNNNNGC	4 cut(s)	1235, 1325, 1786, 1805
BstNI	CCWGG	2 cut(s)	1123, 2004
BstNSI	RCATGY	3 cut(s)	1423, 1623, 1927
BstSCI	CCNGG	2 cut(s)	1121, 2002
BstSLI	GKGCMC	1 cut(s)	305
BstV1I	GCAGC	5 cut(s)	1528, 1874, 1918, 1921, 1994
BstX2I	RGATCY	2 cut(s)	1132, 1830
BstYI	RGATCY	2 cut(s)	1132, 1830
Bsu15I	ATCGAT	1 cut(s)	1163
BsuRI	GGCC	2 cut(s)	1650, 1808
BsuTUI	ATCGAT	1 cut(s)	1163
BtgI	CCRYGG	2 cut(s)	1599, 1834
BtrI	CACGTC	1 cut(s)	2023
BtsI	GCAGTG	1 cut(s)	1354
BtsIMutI	CAGTG	2 cut(s)	990, 1354
Cac8I	GCNNGC	2 cut(s)	1300, 1714
CciI	TCATGA	1 cut(s)	1974
CfoI	GCGC	1 cut(s)	2012
Cfr13I	GGNCC	2 cut(s)	385, 1806
ClaI	ATCGAT	1 cut(s)	1163
Csp6I	GTAC	5 cut(s)	252, 864, 1068, 1523, 1903
CspCI	CAANNNNNGTGG	4 cut(s)	586, 621, 1798, 1833
CviQI	GTAC	5 cut(s)	252, 864, 1068, 1523, 1903
DdeI	CTNAG	7 cut(s)	69, 982, 1004, 1136, 1866, 1890, 2072
DpnI	GATC	7 cut(s)	794, 1134, 1224, 1432, 1590, 1725, 1832
DpnII	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
DraI	TTTAAA	1 cut(s)	1575
Eam1104I	CTCTTC	6 cut(s)	165, 250, 289, 294, 499, 1554
EarI	CTCTTC	6 cut(s)	165, 250, 289, 294, 499, 1554
Eco130I	CCWWGG	4 cut(s)	476, 1599, 1645, 1834
Eco31I	GGTCTC	2 cut(s)	706, 1879
Eco47I	GGWCC	1 cut(s)	385
Eco57I	CTGAAG	1 cut(s)	888
Eco72I	CACGTG	1 cut(s)	188
Eco88I	CYCGRG	2 cut(s)	98, 1320
EcoRI	GAATTC	3 cut(s)	451, 784, 1894
EcoRII	CCWGG	2 cut(s)	1121, 2002
EcoT14I	CCWWGG	4 cut(s)	476, 1599, 1645, 1834
EcoT22I	ATGCAT	2 cut(s)	1053, 1105
ErhI	CCWWGG	4 cut(s)	476, 1599, 1645, 1834
FalI	AAGNNNNNCTT	2 cut(s)	1765, 1797
FaqI	GGGAC	3 cut(s)	371, 1994, 2069
FauNDI	CATATG	2 cut(s)	499, 546
Fnu4HI	GCNGC	5 cut(s)	1542, 1863, 1932, 1935, 2008
Fsp4HI	GCNGC	5 cut(s)	1542, 1863, 1932, 1935, 2008
FspBI	CTAG	4 cut(s)	249, 660, 1955, 1959
GlaI	GCGC	1 cut(s)	2011
GluI	GCNGC	5 cut(s)	1542, 1863, 1932, 1935, 2008
GsuI	CTGGAG	2 cut(s)	921, 959
HaeIII	GGCC	2 cut(s)	1650, 1808
HhaI	GCGC	1 cut(s)	2012
Hin6I	GCGC	1 cut(s)	2010
HinP1I	GCGC	1 cut(s)	2010
HincII	GTYRAC	1 cut(s)	2020
HindII	GTYRAC	1 cut(s)	2020
HindIII	AAGCTT	2 cut(s)	392, 1236
HinfI	GANTC	6 cut(s)	60, 143, 155, 980, 1466, 2034
HphI	GGTGA	5 cut(s)	152, 620, 1541, 1684, 2039
Hpy166II	GTNNAC	5 cut(s)	131, 303, 332, 1417, 2020
Hpy188I	TCNGA	4 cut(s)	205, 356, 1097, 1815
Hpy8I	GTNNAC	5 cut(s)	131, 303, 332, 1417, 2020
HpyAV	CCTTC	6 cut(s)	77, 185, 628, 1036, 1474, 1990
HpyCH4III	ACNGT	1 cut(s)	997
HpyCH4IV	ACGT	4 cut(s)	187, 1287, 1372, 2022
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1235, 1325, 1786, 1805
HpyF3I	CTNAG	7 cut(s)	69, 982, 1004, 1136, 1866, 1890, 2072
HpySE526I	ACGT	4 cut(s)	187, 1287, 1372, 2022
HspAI	GCGC	1 cut(s)	2010
Kzo9I	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
LmnI	GCTCC	4 cut(s)	1025, 1702, 1820, 2005
Lsp1109I	GCAGC	5 cut(s)	1528, 1874, 1918, 1921, 1994
MaeI	CTAG	4 cut(s)	249, 660, 1955, 1959
MaeII	ACGT	4 cut(s)	187, 1287, 1372, 2022
MaeIII	GTNAC	5 cut(s)	397, 1183, 1288, 1489, 1594
MalI	GATC	7 cut(s)	794, 1134, 1224, 1432, 1590, 1725, 1832
MbiI	CCGCTC	1 cut(s)	1229
MboI	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
MboII	GAAGA	9 cut(s)	152, 237, 276, 281, 486, 1005, 1181, 1325, 1571
MflI	RGATCY	2 cut(s)	1132, 1830
MhlI	GDGCHC	4 cut(s)	305, 937, 1321, 1707
MlyI	GAGTC	1 cut(s)	974
MmeI	TCCRAC	4 cut(s)	597, 1606, 1925, 2076
Mph1103I	ATGCAT	2 cut(s)	1053, 1105
MseI	TTAA	9 cut(s)	174, 231, 417, 504, 1032, 1106, 1574, 1913, 2105
MslI	CAYNNNNRTG	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	1865, 2071
MspR9I	CCNGG	2 cut(s)	1123, 2004
MssI	GTTTAAAC	1 cut(s)	1575
Mva1269I	GAATGC	2 cut(s)	209, 1411
MvaI	CCWGG	2 cut(s)	1123, 2004
MwoI	GCNNNNNNNGC	4 cut(s)	1235, 1325, 1786, 1805
NcoI	CCATGG	2 cut(s)	1599, 1834
NdeI	CATATG	2 cut(s)	499, 546
NdeII	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
NlaIV	GGNNCC	3 cut(s)	387, 1832, 2001
NmuCI	GTSAC	2 cut(s)	397, 1183
NsiI	ATGCAT	2 cut(s)	1053, 1105
NspI	RCATGY	3 cut(s)	1423, 1623, 1927
NspV	TTCGAA	1 cut(s)	1662
PaeR7I	CTCGAG	1 cut(s)	98
PagI	TCATGA	1 cut(s)	1974
PciI	ACATGT	2 cut(s)	1419, 1923
PctI	GAATGC	2 cut(s)	209, 1411
PfeI	GAWTC	5 cut(s)	60, 143, 155, 1466, 2034
PflFI	GACNNNGTC	1 cut(s)	1091
PkrI	GCNGC	5 cut(s)	1543, 1864, 1933, 1936, 2009
PleI	GAGTC	1 cut(s)	974
PmaCI	CACGTG	1 cut(s)	188
PmeI	GTTTAAAC	1 cut(s)	1575
PmlI	CACGTG	1 cut(s)	188
PpsI	GAGTC	1 cut(s)	974
Ppu21I	YACGTR	1 cut(s)	188
PscI	ACATGT	2 cut(s)	1419, 1923
PshBI	ATTAAT	1 cut(s)	1106
PsiI	TTATAA	1 cut(s)	881
Psp6I	CCWGG	2 cut(s)	1121, 2002
PspCI	CACGTG	1 cut(s)	188
PspGI	CCWGG	2 cut(s)	1121, 2002
PspN4I	GGNNCC	3 cut(s)	387, 1832, 2001
PspPI	GGNCC	2 cut(s)	385, 1806
PsuI	RGATCY	2 cut(s)	1132, 1830
PsyI	GACNNNGTC	1 cut(s)	1091
PvuII	CAGCTG	2 cut(s)	1865, 2071
RsaI	GTAC	5 cut(s)	253, 865, 1069, 1524, 1904
RsaNI	GTAC	5 cut(s)	252, 864, 1068, 1523, 1903
RseI	CAYNNNNRTG	1 cut(s)	429
SaqAI	TTAA	9 cut(s)	174, 231, 417, 504, 1032, 1106, 1574, 1913, 2105
SatI	GCNGC	5 cut(s)	1542, 1863, 1932, 1935, 2008
Sau3AI	GATC	7 cut(s)	792, 1132, 1222, 1430, 1588, 1723, 1830
Sau96I	GGNCC	2 cut(s)	385, 1806
SchI	GAGTC	1 cut(s)	974
ScrFI	CCNGG	2 cut(s)	1123, 2004
SduI	GDGCHC	4 cut(s)	305, 937, 1321, 1707
Sfr274I	CTCGAG	1 cut(s)	98
SfuI	TTCGAA	1 cut(s)	1662
SinI	GGWCC	1 cut(s)	385
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	1 cut(s)	429
SmlI	CTYRAG	3 cut(s)	98, 596, 910
SmoI	CTYRAG	3 cut(s)	98, 596, 910
SsiI	CCGC	1 cut(s)	1229
SspMI	CTAG	4 cut(s)	249, 660, 1955, 1959
StyD4I	CCNGG	2 cut(s)	1121, 2002
StyI	CCWWGG	4 cut(s)	476, 1599, 1645, 1834
TaaI	ACNGT	1 cut(s)	997
TaiI	ACGT	4 cut(s)	190, 1290, 1375, 2025
TaqI	TCGA	5 cut(s)	99, 410, 1163, 1225, 1662
TatI	WGTACW	2 cut(s)	251, 1522
TfiI	GAWTC	5 cut(s)	60, 143, 155, 1466, 2034
Tru1I	TTAA	9 cut(s)	174, 231, 417, 504, 1032, 1106, 1574, 1913, 2105
Tru9I	TTAA	9 cut(s)	174, 231, 417, 504, 1032, 1106, 1574, 1913, 2105
TscAI	CASTG	2 cut(s)	990, 1361
TseFI	GTSAC	2 cut(s)	397, 1183
TseI	GCWGC	5 cut(s)	1541, 1862, 1931, 1934, 2007
Tsp45I	GTSAC	2 cut(s)	397, 1183
TspRI	CASTG	2 cut(s)	990, 1361
Tth111I	GACNNNGTC	1 cut(s)	1091
VneI	GTGCAC	1 cut(s)	301
VpaK11BI	GGWCC	1 cut(s)	385
VspI	ATTAAT	1 cut(s)	1106
XapI	RAATTY	8 cut(s)	451, 481, 676, 784, 1349, 1653, 1894, 2082
XceI	RCATGY	3 cut(s)	1423, 1623, 1927
XhoI	CTCGAG	1 cut(s)	98
XspI	CTAG	4 cut(s)	249, 660, 1955, 1959
Zsp2I	ATGCAT	2 cut(s)	1053, 1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.