Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006600

Physical Location & Seq

Genomic Coordinates Forward (+)

23473995 .. 23477717

Gene Structure 3723 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0252500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGTCTTTAAAATCAGTTAAGATTTCAACTGATGTTTTCCTCTACTTTTCCCCACACCGGCCGCGATACAGAAACACCGAGACCGACTTCCTCTTTCACCCACACCGCGACCGATCGTCCTCTTTCCCCACACCGCGATACAGAGACACCGCAACCGAAGTCATCTGTCGCCCCCGTCCAGTAACCGACGACCTCTTTCGCCTTCTCTGGCTCCGATGGCTTGATTTCCTCCTCCTTCTCTCTCATCTCTCTTCTGAAATCCAGCGAATCTCCCAATTGCTGAGATCGAGAAGCCGAAGCCGGAGCTGCAGTGGCCGTCTGTCCTTTCTCTTTCCACGGGCCTCCCCTTCTCAGCCCCTCTCTTCGACCGTCGAGGCGGCGACGGCCATCGCTCTCATCGACGGTAATTTGCTTGAATCTATAGTTTTCTGGGCACTTCTGAGGCAATTACGGCTATTAAGGAGCAAGAGAAGCAAATTAACGATTTTAGACAACATTAGTGGGATTATAAGACCTTCAAGATTGACGTTGTTATTGGGTCCACCGAGCTCCGGCAAGACGACGCTACTATTGGCTCTCGCCGGACGCCTTGGAACTGGTCTTCAGATGCCAGGTAGCACAACATACAATGGCCATGGCTTAAACGAGTTTGTGCCGCAGAGGACGTTGGCTTATGTCAGTCAACAGGACTGGTTTGCGGTGGAGATGACTGTAAGGGAGACTCTTGACTTTGCAGGACGGTGTCAAGGTGTTGGATTCAAATATGATATGCTAGTAGAACTAGCAAGAAGAGAAAAGATTGCGGGGATAAAATCCGATGGTGATCTTGATATATTCATGAAGTCATTAGCTCTTGGAGAGAAAGAGACAAGCCTTGTGGTAGAGTACATCATGAAGATTTTAGGGTTGGACATATGCGCTGATACGTTGGTAGGAGATGAAATGCTTAAAGGTATATCAGGGGGCCAAAAGAAGCGGCTTACTGCAGGTGCATACTTGGTGTTTCTAGAAAGGAAAATAATCTCTTTCTCTACAAAAGGTAATTATACTTGGAATGTGATTTGGCTGAGGAAATCTCATAAACTCAAAGTCTGTTTAACTAAGCAAACAGATGATAAGTTCTCCAAGAACAGAGAAATTCTATTGAATCAAACCATGCAGCTTAAAAGGAAAACAAGACTGATTTTCCAAAAGCTAAAGGCGTTATTGATCATTGGTGTTGCACTTGTGGTGATTCTGTTGATCATTCTCATCACCAAACACCCAAAGAATTACCTATACCCAACACGCATAACATCTGGAGCAGCAGCTTTGGTGTTTTCAGCCTTCTACATCATGCTGAAGGCATCTTTGCAAGGTTCATCAACGGGTGGCAGTACCTCTCTTACGACTTCAGATAAGAACGACAAGGATTTGGATCGGGCGAGTGAGAGGCAGGATCTTGAAGGAAAAGAGCTAAAGCAAGAAACTACTTTGCATGAACTGGAGCTGGTTGCCGTCCATGCTCTTCATGAACTTGTTTCTTTAGTTCACAGTCATGTCAATGCTGCAGGGCAATATGATTTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

523

Amino Acids

58.95

Weight (kDa)

9.75

Isoelectric Point (pI)

38.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	163 - 328	2.2e-11	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22830 AT1G22830 AT1G71490
fragaria_vesca	FvH4_5g32370
malus_domestica	MD04G1056500.v1.1 MD15G1404200.v1.1
prunus_persica	Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1
pyrus_communis	pycom04g04960 pycom15g36160
rosa_chinensis	RchiOBHm_Chr7g0228861
rosa_laevigata	RLG00000001540 RLG00000002151 RLG00000002152
rosa_multiflora	Rmu_co8395259.1_g000001 Rmu_sc0004517.1_g000002 Rmu_sc0011218.1_g000005 Rmu_sc0013945.1_g000009
rosa_rugosa	Rorug07G0252400 Rorug07G0252500
rosa_samantha	Rh7AG405700 Rh7BG385000 Rh7CG423300 Rh7DG399700
rosa_wichuraiana	Rw7G033610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	509
AarI	CACCTGC	1 cut(s)	977
Acc36I	ACCTGC	1 cut(s)	977
AccII	CGCG	3 cut(s)	64, 108, 136
AciI	CCGC	9 cut(s)	62, 106, 134, 150, 377, 656, 698, 803, 976
AclWI	GGATC	2 cut(s)	1425, 1446
AcoI	YGGCCR	4 cut(s)	59, 313, 384, 631
AcsI	RAATTY	1 cut(s)	1137
AcuI	CTGAAG	3 cut(s)	587, 1361, 1377
AcyI	GRCGYC	1 cut(s)	586
AfaI	GTAC	2 cut(s)	887, 1378
AfiI	CCNNNNNNNGG	2 cut(s)	57, 551
AgsI	TTSAA	6 cut(s)	27, 416, 519, 760, 1147, 1445
AhdI	GACNNNNNGTC	1 cut(s)	115
AjnI	CCWGG	1 cut(s)	610
AluBI	AGCT	8 cut(s)	306, 549, 851, 1162, 1195, 1310, 1456, 1489
AluI	AGCT	8 cut(s)	306, 549, 851, 1162, 1195, 1310, 1456, 1489
Alw21I	GWGCWC	1 cut(s)	551
Alw26I	GTCTC	4 cut(s)	74, 138, 713, 860
AlwI	GGATC	2 cut(s)	1425, 1446
AoxI	GGCC	6 cut(s)	59, 313, 339, 384, 631, 964
ApeKI	GCWGC	5 cut(s)	306, 1159, 1304, 1307, 1547
ApoI	RAATTY	1 cut(s)	1137
AspLEI	GCGC	1 cut(s)	920
AspS9I	GGNCC	3 cut(s)	339, 539, 964
AsuHPI	GGTGA	4 cut(s)	89, 833, 1243, 1246
AvaII	GGWCC	1 cut(s)	539
BaeGI	GKGCMC	1 cut(s)	436
BaeI	ACNNNNGTAYC	2 cut(s)	915, 948
BalI	TGGCCA	1 cut(s)	633
BanII	GRGCYC	1 cut(s)	551
BbsI	GAAGAC	1 cut(s)	593
Bbv12I	GWGCWC	1 cut(s)	551
BbvCI	CCTCAGC	1 cut(s)	1067
BbvI	GCAGC	5 cut(s)	293, 1171, 1316, 1319, 1534
BccI	CCATC	3 cut(s)	210, 395, 812
BceAI	ACGGC	4 cut(s)	300, 399, 467, 1481
BciT130I	CCWGG	1 cut(s)	612
BclI	TGATCA	2 cut(s)	1209, 1242
BcoDI	GTCTC	4 cut(s)	74, 138, 713, 860
BfaI	CTAG	3 cut(s)	773, 782, 1007
BfmI	CTRYAG	4 cut(s)	307, 420, 984, 1548
BfuAI	ACCTGC	1 cut(s)	977
BisI	GCNGC	9 cut(s)	62, 307, 378, 656, 977, 1160, 1305, 1308, 1548
BlsI	GCNGC	9 cut(s)	63, 308, 379, 657, 978, 1161, 1306, 1309, 1549
Bme1390I	CCNGG	1 cut(s)	612
Bme18I	GGWCC	1 cut(s)	539
BmeRI	GACNNNNNGTC	1 cut(s)	115
BmgT120I	GGNCC	3 cut(s)	339, 539, 964
BmiI	GGNNCC	3 cut(s)	212, 540, 965
BmrFI	CCNGG	1 cut(s)	612
BmsI	GCATC	2 cut(s)	597, 1355
BpiI	GAAGAC	1 cut(s)	593
BplI	GAGNNNNNCTC	2 cut(s)	1060, 1092
BpmI	CTGGAG	2 cut(s)	1320, 1505
Bpu10I	CCTNAGC	1 cut(s)	1067
BsaBI	GATNNNNATC	2 cut(s)	822, 1416
BsaHI	GRCGYC	1 cut(s)	586
BsaI	GGTCTC	1 cut(s)	74
BsaJI	CCNNGG	3 cut(s)	335, 589, 634
BsaXI	ACNNNNNCTCC	2 cut(s)	295, 325
Bsc4I	CCNNNNNNNGG	2 cut(s)	57, 551
Bse118I	RCCGGY	1 cut(s)	57
Bse1I	ACTGG	4 cut(s)	179, 601, 695, 1488
Bse8I	GATNNNNATC	2 cut(s)	822, 1416
BseBI	CCWGG	1 cut(s)	612
BseDI	CCNNGG	3 cut(s)	335, 589, 634
BseJI	GATNNNNATC	2 cut(s)	822, 1416
BseLI	CCNNNNNNNGG	2 cut(s)	57, 551
BseMII	CTCAG	4 cut(s)	272, 365, 431, 1058
BseNI	ACTGG	4 cut(s)	179, 601, 695, 1488
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	436
BseX3I	CGGCCG	1 cut(s)	59
BseXI	GCAGC	5 cut(s)	293, 1171, 1316, 1319, 1534
Bsh1236I	CGCG	3 cut(s)	64, 108, 136
Bsh1285I	CGRYCG	4 cut(s)	62, 112, 116, 369
BshFI	GGCC	6 cut(s)	61, 315, 341, 386, 633, 966
BsiEI	CGRYCG	4 cut(s)	62, 112, 116, 369
BsiHKAI	GWGCWC	1 cut(s)	551
BsiSI	CCGG	4 cut(s)	58, 301, 552, 582
BslI	CCNNNNNNNGG	2 cut(s)	57, 551
BsmAI	GTCTC	4 cut(s)	74, 138, 713, 860
BsnI	GGCC	6 cut(s)	61, 315, 341, 386, 633, 966
Bso31I	GGTCTC	1 cut(s)	74
Bsp1286I	GDGCHC	2 cut(s)	436, 551
Bsp143I	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
Bsp19I	CCATGG	1 cut(s)	634
BspACI	CCGC	9 cut(s)	62, 106, 134, 150, 377, 656, 698, 803, 976
BspANI	GGCC	6 cut(s)	61, 315, 341, 386, 633, 966
BspCNI	CTCAG	4 cut(s)	273, 364, 432, 1059
BspFNI	CGCG	3 cut(s)	64, 108, 136
BspHI	TCATGA	3 cut(s)	837, 891, 1510
BspLI	GGNNCC	3 cut(s)	212, 540, 965
BspMAI	CTGCAG	3 cut(s)	311, 988, 1552
BspMI	ACCTGC	1 cut(s)	977
BspPI	GGATC	2 cut(s)	1425, 1446
BspQI	GCTCTTC	1 cut(s)	1512
BspTNI	GGTCTC	1 cut(s)	74
BsrFI	RCCGGY	1 cut(s)	57
BsrI	ACTGG	4 cut(s)	179, 601, 695, 1488
BssAI	RCCGGY	1 cut(s)	57
BssECI	CCNNGG	3 cut(s)	335, 589, 634
BssMI	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
BssNI	GRCGYC	1 cut(s)	586
BssT1I	CCWWGG	2 cut(s)	589, 634
Bst2UI	CCWGG	1 cut(s)	612
Bst4CI	ACNGT	5 cut(s)	370, 404, 712, 741, 1535
Bst6I	CTCTTC	4 cut(s)	256, 367, 784, 1512
BstACI	GRCGYC	1 cut(s)	586
BstDEI	CTNAG	5 cut(s)	281, 351, 440, 1067, 1101
BstDSI	CCRYGG	2 cut(s)	335, 634
BstFNI	CGCG	3 cut(s)	64, 108, 136
BstHHI	GCGC	1 cut(s)	920
BstKTI	GATC	7 cut(s)	116, 287, 826, 1212, 1245, 1420, 1441
BstMAI	GTCTC	4 cut(s)	74, 138, 713, 860
BstMBI	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
BstMCI	CGRYCG	4 cut(s)	62, 112, 116, 369
BstMWI	GCNNNNNNNGC	7 cut(s)	217, 306, 312, 383, 451, 471, 1502
BstNI	CCWGG	1 cut(s)	612
BstSCI	CCNGG	1 cut(s)	610
BstSFI	CTRYAG	4 cut(s)	307, 420, 984, 1548
BstSLI	GKGCMC	1 cut(s)	436
BstUI	CGCG	3 cut(s)	64, 108, 136
BstV1I	GCAGC	5 cut(s)	293, 1171, 1316, 1319, 1534
BstV2I	GAAGAC	1 cut(s)	593
BstX2I	RGATCY	1 cut(s)	1438
BstYI	RGATCY	1 cut(s)	1438
BstZI	CGGCCG	1 cut(s)	59
BsuRI	GGCC	6 cut(s)	61, 315, 341, 386, 633, 966
BtgI	CCRYGG	2 cut(s)	335, 634
BtgZI	GCGATG	1 cut(s)	373
BtsI	GCAGTG	1 cut(s)	316
BtsIMutI	CAGTG	1 cut(s)	316
BveI	ACCTGC	1 cut(s)	977
CciI	TCATGA	3 cut(s)	837, 891, 1510
CfoI	GCGC	1 cut(s)	920
Cfr10I	RCCGGY	1 cut(s)	57
Cfr13I	GGNCC	3 cut(s)	339, 539, 964
CseI	GACGC	2 cut(s)	571, 594
Csp6I	GTAC	2 cut(s)	886, 1377
CspCI	CAANNNNNGTGG	4 cut(s)	481, 516, 858, 893
CviAII	CATG	9 cut(s)	635, 838, 892, 1156, 1336, 1478, 1502, 1511, 1538
CviQI	GTAC	2 cut(s)	886, 1377
DdeI	CTNAG	5 cut(s)	281, 351, 440, 1067, 1101
DpnI	GATC	7 cut(s)	115, 286, 825, 1211, 1244, 1419, 1440
DpnII	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
DraI	TTTAAA	1 cut(s)	9
DriI	GACNNNNNGTC	1 cut(s)	115
EaeI	YGGCCR	4 cut(s)	59, 313, 384, 631
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	4 cut(s)	256, 367, 784, 1512
Eam1105I	GACNNNNNGTC	1 cut(s)	115
EarI	CTCTTC	4 cut(s)	256, 367, 784, 1512
Ecl136II	GAGCTC	1 cut(s)	549
EclXI	CGGCCG	1 cut(s)	59
Eco130I	CCWWGG	2 cut(s)	589, 634
Eco24I	GRGCYC	1 cut(s)	551
Eco31I	GGTCTC	1 cut(s)	74
Eco47I	GGWCC	1 cut(s)	539
Eco52I	CGGCCG	1 cut(s)	59
Eco53kI	GAGCTC	1 cut(s)	549
Eco57I	CTGAAG	3 cut(s)	587, 1361, 1377
EcoICRI	GAGCTC	1 cut(s)	549
EcoRII	CCWGG	1 cut(s)	610
EcoT14I	CCWWGG	2 cut(s)	589, 634
EcoT38I	GRGCYC	1 cut(s)	551
ErhI	CCWWGG	2 cut(s)	589, 634
FaeI	CATG	9 cut(s)	638, 841, 895, 1159, 1339, 1481, 1505, 1514, 1541
FatI	CATG	9 cut(s)	634, 837, 891, 1155, 1335, 1477, 1501, 1510, 1537
FauI	CCCGC	1 cut(s)	796
FauNDI	CATATG	1 cut(s)	914
FbaI	TGATCA	2 cut(s)	1209, 1242
Fnu4HI	GCNGC	9 cut(s)	62, 307, 378, 656, 977, 1160, 1305, 1308, 1548
FriOI	GRGCYC	1 cut(s)	551
Fsp4HI	GCNGC	9 cut(s)	62, 307, 378, 656, 977, 1160, 1305, 1308, 1548
FspBI	CTAG	3 cut(s)	773, 782, 1007
GlaI	GCGC	1 cut(s)	919
GluI	GCNGC	9 cut(s)	62, 307, 378, 656, 977, 1160, 1305, 1308, 1548
GsuI	CTGGAG	2 cut(s)	1320, 1505
HaeIII	GGCC	6 cut(s)	61, 315, 341, 386, 633, 966
HapII	CCGG	4 cut(s)	58, 301, 552, 582
HgaI	GACGC	2 cut(s)	571, 594
HhaI	GCGC	1 cut(s)	920
Hin1I	GRCGYC	1 cut(s)	586
Hin1II	CATG	9 cut(s)	638, 841, 895, 1159, 1339, 1481, 1505, 1514, 1541
Hin6I	GCGC	1 cut(s)	918
HinP1I	GCGC	1 cut(s)	918
HincII	GTYRAC	1 cut(s)	683
HindII	GTYRAC	1 cut(s)	683
HinfI	GANTC	6 cut(s)	267, 416, 721, 756, 1147, 1234
HpaII	CCGG	4 cut(s)	58, 301, 552, 582
HphI	GGTGA	4 cut(s)	89, 833, 1243, 1246
Hpy166II	GTNNAC	3 cut(s)	542, 683, 1531
Hpy188I	TCNGA	6 cut(s)	215, 256, 441, 606, 817, 1396
Hpy8I	GTNNAC	3 cut(s)	542, 683, 1531
Hpy99I	CGWCG	5 cut(s)	191, 374, 385, 404, 565
HpyAV	CCTTC	7 cut(s)	212, 245, 357, 525, 1336, 1336, 1439
HpyCH4III	ACNGT	5 cut(s)	370, 404, 712, 741, 1535
HpyCH4IV	ACGT	3 cut(s)	527, 665, 926
HpyCH4V	TGCA	9 cut(s)	309, 734, 986, 992, 1159, 1223, 1354, 1477, 1550
HpyF10VI	GCNNNNNNNGC	7 cut(s)	217, 306, 312, 383, 451, 471, 1502
HpyF3I	CTNAG	5 cut(s)	281, 351, 440, 1067, 1101
HpySE526I	ACGT	3 cut(s)	527, 665, 926
Hsp92I	GRCGYC	1 cut(s)	586
Hsp92II	CATG	9 cut(s)	638, 841, 895, 1159, 1339, 1481, 1505, 1514, 1541
HspAI	GCGC	1 cut(s)	918
Ksp22I	TGATCA	2 cut(s)	1209, 1242
Kzo9I	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
LguI	GCTCTTC	1 cut(s)	1512
LmnI	GCTCC	6 cut(s)	216, 303, 462, 554, 1301, 1486
Lsp1109I	GCAGC	5 cut(s)	293, 1171, 1316, 1319, 1534
LweI	GCATC	2 cut(s)	597, 1355
MaeI	CTAG	3 cut(s)	773, 782, 1007
MaeII	ACGT	3 cut(s)	527, 665, 926
MaeIII	GTNAC	1 cut(s)	181
MalI	GATC	7 cut(s)	115, 286, 825, 1211, 1244, 1419, 1440
MboI	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
MboII	GAAGA	6 cut(s)	243, 354, 593, 801, 907, 1499
MfeI	CAATTG	1 cut(s)	275
MflI	RGATCY	1 cut(s)	1438
MhlI	GDGCHC	2 cut(s)	436, 551
MlsI	TGGCCA	1 cut(s)	633
MluCI	AATT	7 cut(s)	275, 406, 446, 476, 1042, 1137, 1270
MluNI	TGGCCA	1 cut(s)	633
MlyI	GAGTC	1 cut(s)	715
MmeI	TCCRAC	2 cut(s)	733, 888
Mox20I	TGGCCA	1 cut(s)	633
MscI	TGGCCA	1 cut(s)	633
MseI	TTAA	8 cut(s)	8, 18, 458, 479, 641, 948, 1097, 1164
MslI	CAYNNNNRTG	2 cut(s)	1536, 1542
Msp20I	TGGCCA	1 cut(s)	633
MspI	CCGG	4 cut(s)	58, 301, 552, 582
MspR9I	CCNGG	1 cut(s)	612
MunI	CAATTG	1 cut(s)	275
MvaI	CCWGG	1 cut(s)	612
MvnI	CGCG	3 cut(s)	64, 108, 136
MwoI	GCNNNNNNNGC	7 cut(s)	217, 306, 312, 383, 451, 471, 1502
NcoI	CCATGG	1 cut(s)	634
NdeI	CATATG	1 cut(s)	914
NdeII	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
NlaIII	CATG	9 cut(s)	638, 841, 895, 1159, 1339, 1481, 1505, 1514, 1541
NlaIV	GGNNCC	3 cut(s)	212, 540, 965
PagI	TCATGA	3 cut(s)	837, 891, 1510
PaqCI	CACCTGC	1 cut(s)	977
PciSI	GCTCTTC	1 cut(s)	1512
PcsI	WCGNNNNNNNCGW	1 cut(s)	396
PfeI	GAWTC	5 cut(s)	267, 416, 756, 1147, 1234
PflFI	GACNNNGTC	1 cut(s)	741
PkrI	GCNGC	9 cut(s)	63, 308, 379, 657, 978, 1161, 1306, 1309, 1549
Ple19I	CGATCG	1 cut(s)	116
PleI	GAGTC	1 cut(s)	715
PpsI	GAGTC	1 cut(s)	715
PsiI	TTATAA	1 cut(s)	509
Psp124BI	GAGCTC	1 cut(s)	551
Psp6I	CCWGG	1 cut(s)	610
PspGI	CCWGG	1 cut(s)	610
PspN4I	GGNNCC	3 cut(s)	212, 540, 965
PspPI	GGNCC	3 cut(s)	339, 539, 964
PstI	CTGCAG	3 cut(s)	311, 988, 1552
PsuI	RGATCY	1 cut(s)	1438
PsyI	GACNNNGTC	1 cut(s)	741
PvuI	CGATCG	1 cut(s)	116
RsaI	GTAC	2 cut(s)	887, 1378
RsaNI	GTAC	2 cut(s)	886, 1377
RseI	CAYNNNNRTG	2 cut(s)	1536, 1542
SacI	GAGCTC	1 cut(s)	551
SapI	GCTCTTC	1 cut(s)	1512
SaqAI	TTAA	8 cut(s)	8, 18, 458, 479, 641, 948, 1097, 1164
SatI	GCNGC	9 cut(s)	62, 307, 378, 656, 977, 1160, 1305, 1308, 1548
Sau3AI	GATC	7 cut(s)	113, 284, 823, 1209, 1242, 1417, 1438
Sau96I	GGNCC	3 cut(s)	339, 539, 964
SchI	GAGTC	1 cut(s)	715
ScrFI	CCNGG	1 cut(s)	612
SduI	GDGCHC	2 cut(s)	436, 551
SfaNI	GCATC	2 cut(s)	597, 1355
SfcI	CTRYAG	4 cut(s)	307, 420, 984, 1548
SinI	GGWCC	1 cut(s)	539
SmiMI	CAYNNNNRTG	2 cut(s)	1536, 1542
Sse9I	AATT	7 cut(s)	275, 406, 446, 476, 1042, 1137, 1270
SsiI	CCGC	9 cut(s)	62, 106, 134, 150, 377, 656, 698, 803, 976
SspMI	CTAG	3 cut(s)	773, 782, 1007
SstI	GAGCTC	1 cut(s)	551
StyD4I	CCNGG	1 cut(s)	610
StyI	CCWWGG	2 cut(s)	589, 634
TaaI	ACNGT	5 cut(s)	370, 404, 712, 741, 1535
TaiI	ACGT	3 cut(s)	530, 668, 929
TaqI	TCGA	4 cut(s)	287, 365, 372, 399
TaqII	GACCGA	2 cut(s)	98, 126
TasI	AATT	7 cut(s)	275, 406, 446, 476, 1042, 1137, 1270
TatI	WGTACW	1 cut(s)	885
TauI	GCSGC	4 cut(s)	64, 380, 658, 979
TfiI	GAWTC	5 cut(s)	267, 416, 756, 1147, 1234
Tru1I	TTAA	8 cut(s)	8, 18, 458, 479, 641, 948, 1097, 1164
Tru9I	TTAA	8 cut(s)	8, 18, 458, 479, 641, 948, 1097, 1164
TscAI	CASTG	1 cut(s)	316
TseI	GCWGC	5 cut(s)	306, 1159, 1304, 1307, 1547
TspDTI	ATGAA	8 cut(s)	826, 854, 908, 954, 1350, 1494, 1499, 1527
TspRI	CASTG	1 cut(s)	316
Tth111I	GACNNNGTC	1 cut(s)	741
VpaK11BI	GGWCC	1 cut(s)	539
XapI	RAATTY	1 cut(s)	1137
XbaI	TCTAGA	1 cut(s)	1006
XspI	CTAG	3 cut(s)	773, 782, 1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.