Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0006600

Physical Location & Seq

Genomic Coordinates Reverse (-)

6898216 .. 6906573

Gene Structure 8358 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1056500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGCCACCATCTTATTCTCGTTTCATCCCAAGAGGCCTTTCTATATCTCAAATCCAGAGATTCATACCTAAAAGCTGGAAGGAAGGAACGAAACAATTTGGGAAATCATCTGCTTTATGTATTTCGGAAACAGGTTCAGCTGTTGATGATTCTATGATAGATTCTCTTCTTACATCCATCAATAATTATGCAAGCCAAGGAAATTTATCAAAAGCATTCAAAACTATCTCTCTTGTCCAGCTCCATGCCTCTTCTCCTACTTGTGACCTTATCTTACATTCCATCTCTTCTGTTATCTTATCTTGTGCCAACCATAAATCATTACCACAGGGTGAACAACTTCATGCACATATTGTTAGATTGGGGTTTGAACGACACCCCATTTTGGTTCCCAAGCTGGTTACATTTTACTCAAGCTTTAATCTCCATGCTGAGGCTCGTATCATTCTTGAGAATTCAAATATATTGCATCCTCTACCTTGGAATCTGCTCATCTCTTCATATGTTAAAAATGAACTTTTGGATGATGCTCTCTCTACATATAAACAAATGGTCAACAAGGGGATTAGGCCAGATTGTTTCACTTACCCATCTGTTCTCAAGGCTTGCGGTGAAAAATTGGATATAAGTTTTGGCAGGGAGGTGCATAAGTCCATTGATGCTCGTTGTCAGGAGTGGAATTTATTTGTGCATAATTCATTGGTCTCCATGTATGGGAAATTTGGGCTTCTCGACGTTGCTCGTCACTTATTCGACAAAATGCCCACAAGGGATTCAATTTCTTGGAATGCAATGATCTCTGGTTATGCCTCCAAGGGCATGTGGACGGATGCATTTGAGCTGTTTGGAAACATGCAGATGGAGGGTATTGGAGTTAATATCTTACTTTGGAATACCATTGCTGGTGGGTGCTTGAGGACAGGTAATTTCAGGGGCGCTCTTGAGTTGCTTTCTCAAATGATAAGTTGTGGTATTTTATTGGACTCGGTAGCATTGACGATTGGTTTGAGTGCTTGTTCCCACAATGGAGCCATTAAATTAGGGAAGGAAATTCATGGTTTTTCGATTCGTAGTGGTTGTGATGGGTATAATAATGTTAATAATGCATTGATTACATTGTATTCTAGGTGCAAAGACCTTAGGAAAGCCTATACTTTGTTTGAATTGATAGAAGATAGGAGTATAATTACTTGGAACTCCATGCTTTCTGGTTATTCTCACATGGATCGAGCTGAGGAAGCTTCATTCTTATTTAGGGAGATGTTGTGTTCAGGAATTGAACCTAACTATGTTACTATTGCCAGCATCCTTCCTCTCTGTGCTCGGGTCGCAAACCTTCAACATGGGAAGGAGTTCCACTGCTACATTACAAAACGTGTAGTGTTTGATGATTGTTTATTGCTACGGAATGCCCTTGTGGACATGTATGCCAGATCGGGCAAGGTTTTACAGGCGAGAAGAGTATTTGATTCAATGTCGAAGAAGGATGAAGTAACTTATACTTGCATGATTGTGGGATATGGAGTCCAGGGTGAAGGAAAAGCTGCACTGAAGTTATTTGAAGAGATGAACTTGTTACACATAAAACCAGATCATGTAACTATGGTTTCAATTTTATCAGCTTGTAGCCATTCCGGTCTAGTAATCCAAGGCCAAATGCTATTTGAAAAGATGCTGAGTGTATACGGTATAACTCCCGATTTGGAGCACTATGCCTGCATGGTCGATCTCCTTGGGAGGGCCGGTCTACTAAACAAAGCAAAGAAGATTATCACAAGGATGCCTTACAAGCCAACTTCTGCTATGTGGGCTACACTTATTGGAGCATGTCGGATCCATGGAAATATGGAGATCGGGGAATGGGCAGCCGGGAAGCTGTTAGAAATGAGACCGGAAAATTCTGGTTACTATGTGTTAATTGCTAACATGTATGCTGCTGCTGGTTGTTGGAACAACCTAGCGAGAGTGAGGACTTTCATGAGGGACTTGGGTGTGAGGAAGGATCCTGGCTGTGCTTGGGTTGATGTGGGCGATGGATTTTCACCCTTTTTGGTGGGGGACACAACAAATCGGCTGAGAGATGAAATTTACCTTTTGTTGGATGGCTTAACGGAGTTAATGAAAGATACTGATTCCGTTGTCAATGGGGATATAAGTTCAGGTTATGATGTTTTTGAGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

728

Amino Acids

80.94

Weight (kDa)

7.26

Isoelectric Point (pI)

39.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	161 - 203	2.6e-10	PPR repeat family
PPR	PF01535	161 - 189	5.8e-06	PPR repeat
PPR_2	PF13041	258 - 293	2.7e-07	PPR repeat family
PPR	PF01535	260 - 290	3.4e-08	PPR repeat
PPR_2	PF13041	394 - 440	8e-09	PPR repeat family
PPR	PF01535	396 - 426	5.6e-07	PPR repeat
PPR_2	PF13041	496 - 543	2.4e-10	PPR repeat family
E_motif	PF20431	613 - 675	5.4e-22	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22830 AT1G22830 AT1G71490
fragaria_vesca	FvH4_5g32370
malus_domestica	MD04G1056500.v1.1 MD15G1404200.v1.1
prunus_persica	Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1 Prupe.1G551000_v2.0.a1
pyrus_communis	pycom04g04960 pycom15g36160
rosa_chinensis	RchiOBHm_Chr7g0228861
rosa_laevigata	RLG00000001540 RLG00000002151 RLG00000002152
rosa_multiflora	Rmu_co8395259.1_g000001 Rmu_sc0004517.1_g000002 Rmu_sc0011218.1_g000005 Rmu_sc0013945.1_g000009
rosa_rugosa	Rorug07G0252400 Rorug07G0252500
rosa_samantha	Rh7AG405700 Rh7BG385000 Rh7CG423300 Rh7DG399700
rosa_wichuraiana	Rw7G033610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	1683, 1747
AciI	CCGC	1 cut(s)	609
AclWI	GGATC	5 cut(s)	1233, 1828, 1841, 1997, 2010
AcsI	RAATTY	7 cut(s)	202, 454, 679, 719, 1050, 1897, 2085
AcuI	CTGAAG	1 cut(s)	1571
AdeI	CACNNNGTG	1 cut(s)	332
AfiI	CCNNNNNNNGG	5 cut(s)	385, 433, 714, 1738, 2098
AflIII	ACRYGT	3 cut(s)	1375, 1422, 1926
AjnI	CCWGG	2 cut(s)	1527, 2005
AjuI	GAANNNNNNNTTGG	2 cut(s)	22, 54
Alw21I	GWGCWC	2 cut(s)	1324, 1710
Alw26I	GTCTC	2 cut(s)	709, 1882
AlwI	GGATC	5 cut(s)	1233, 1828, 1841, 1997, 2010
Ama87I	CYCGRG	1 cut(s)	1323
AoxI	GGCC	4 cut(s)	34, 569, 1651, 1740
ApeKI	GCWGC	4 cut(s)	1544, 1865, 1934, 1937
ApoI	RAATTY	7 cut(s)	202, 454, 679, 719, 1050, 1897, 2085
ArsI	GACNNNNNNTTYG	2 cut(s)	988, 1020
Asp700I	GAANNNNTTC	2 cut(s)	339, 1352
AspLEI	GCGC	1 cut(s)	938
AspS9I	GGNCC	1 cut(s)	1740
AsuC2I	CCSGG	1 cut(s)	1870
AsuHPI	GGTGA	4 cut(s)	344, 623, 1544, 2034
AvaI	CYCGRG	1 cut(s)	1323
AxyI	CCTNAGG	1 cut(s)	1139
BamHI	GGATCC	2 cut(s)	1833, 2002
Bbv12I	GWGCWC	2 cut(s)	1324, 1710
BbvCI	CCTCAGC	2 cut(s)	432, 1233
BbvI	GCAGC	4 cut(s)	1531, 1877, 1921, 1924
BccI	CCATC	8 cut(s)	16, 185, 290, 598, 853, 1076, 2027, 2096
BciT130I	CCWGG	2 cut(s)	1529, 2007
BcnI	CCSGG	1 cut(s)	1870
BcoDI	GTCTC	2 cut(s)	709, 1882
BfaI	CTAG	3 cut(s)	1125, 1640, 1958
BfoI	RGCGCY	1 cut(s)	939
BisI	GCNGC	4 cut(s)	1545, 1866, 1935, 1938
BlsI	GCNGC	4 cut(s)	1546, 1867, 1936, 1939
Bme1390I	CCNGG	3 cut(s)	1529, 1870, 2007
BmeT110I	CYCGRG	1 cut(s)	1323
BmgT120I	GGNCC	1 cut(s)	1740
BmiI	GGNNCC	4 cut(s)	390, 1030, 1835, 2004
BmrFI	CCNGG	3 cut(s)	1529, 1870, 2007
BmsI	GCATC	7 cut(s)	478, 517, 649, 820, 1314, 1662, 1770
Bpu10I	CCTNAGC	2 cut(s)	432, 1233
BpuEI	CTTGAG	5 cut(s)	397, 470, 584, 934, 962
BpuMI	CCSGG	1 cut(s)	1870
BsaI	GGTCTC	2 cut(s)	709, 1882
BsaJI	CCNNGG	7 cut(s)	196, 479, 813, 1528, 1648, 1732, 1837
BsaWI	WCCGGW	2 cut(s)	1634, 1891
BsaXI	ACNNNNNCTCC	4 cut(s)	1250, 1280, 1729, 1759
Bsc4I	CCNNNNNNNGG	5 cut(s)	385, 433, 714, 1738, 2098
Bse118I	RCCGGY	1 cut(s)	1742
Bse21I	CCTNAGG	1 cut(s)	1139
Bse3DI	GCAATG	2 cut(s)	798, 897
BseBI	CCWGG	2 cut(s)	1529, 2007
BseDI	CCNNGG	7 cut(s)	196, 479, 813, 1528, 1648, 1732, 1837
BseGI	GGATG	9 cut(s)	24, 173, 469, 529, 835, 1305, 1492, 1785, 2107
BseLI	CCNNNNNNNGG	5 cut(s)	385, 433, 714, 1738, 2098
BseMI	GCAATG	2 cut(s)	798, 897
BseMII	CTCAG	4 cut(s)	423, 1224, 1667, 2066
BseXI	GCAGC	4 cut(s)	1531, 1877, 1921, 1924
BsgI	GTGCAG	1 cut(s)	1530
BshFI	GGCC	4 cut(s)	36, 571, 1653, 1742
BsiHKAI	GWGCWC	2 cut(s)	1324, 1710
BsiHKCI	CYCGRG	1 cut(s)	1323
BsiSI	CCGG	4 cut(s)	1635, 1743, 1869, 1892
BslFI	GGGAC	2 cut(s)	1997, 2072
BslI	CCNNNNNNNGG	5 cut(s)	385, 433, 714, 1738, 2098
BsmAI	GTCTC	2 cut(s)	709, 1882
BsmFI	GGGAC	2 cut(s)	1997, 2072
BsmI	GAATGC	3 cut(s)	215, 793, 1414
BsnI	GGCC	4 cut(s)	36, 571, 1653, 1742
Bso31I	GGTCTC	2 cut(s)	709, 1882
BsoBI	CYCGRG	1 cut(s)	1323
Bsp1286I	GDGCHC	2 cut(s)	1324, 1710
Bsp143I	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
Bsp19I	CCATGG	1 cut(s)	1837
BspACI	CCGC	1 cut(s)	609
BspANI	GGCC	4 cut(s)	36, 571, 1653, 1742
BspCNI	CTCAG	4 cut(s)	424, 1225, 1668, 2067
BspHI	TCATGA	1 cut(s)	1977
BspLI	GGNNCC	4 cut(s)	390, 1030, 1835, 2004
BspPI	GGATC	5 cut(s)	1233, 1828, 1841, 1997, 2010
BspTNI	GGTCTC	2 cut(s)	709, 1882
BsrDI	GCAATG	2 cut(s)	798, 897
BsrFI	RCCGGY	1 cut(s)	1742
BssAI	RCCGGY	1 cut(s)	1742
BssECI	CCNNGG	7 cut(s)	196, 479, 813, 1528, 1648, 1732, 1837
BssMI	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
BssNAI	GTATAC	1 cut(s)	1684
BssT1I	CCWWGG	6 cut(s)	196, 479, 813, 1648, 1732, 1837
Bst1107I	GTATAC	1 cut(s)	1684
Bst2UI	CCWGG	2 cut(s)	1529, 2007
Bst4CI	ACNGT	1 cut(s)	1688
Bst6I	CTCTTC	6 cut(s)	171, 256, 292, 502, 1453, 1557
BstC8I	GCNNGC	4 cut(s)	193, 607, 1303, 1717
BstDEI	CTNAG	5 cut(s)	432, 1139, 1233, 1676, 2075
BstDSI	CCRYGG	1 cut(s)	1837
BstF5I	GGATG	9 cut(s)	24, 173, 469, 529, 835, 1305, 1492, 1785, 2107
BstH2I	RGCGCY	1 cut(s)	939
BstHHI	GCGC	1 cut(s)	938
BstKTI	GATC	8 cut(s)	798, 1228, 1436, 1594, 1729, 1836, 1854, 2005
BstMAI	GTCTC	2 cut(s)	709, 1882
BstMBI	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
BstMWI	GCNNNNNNNGC	4 cut(s)	1238, 1328, 1789, 1808
BstNI	CCWGG	2 cut(s)	1529, 2007
BstNSI	RCATGY	5 cut(s)	823, 856, 1426, 1830, 1930
BstSCI	CCNGG	3 cut(s)	1527, 1868, 2005
BstV1I	GCAGC	4 cut(s)	1531, 1877, 1921, 1924
BstX2I	RGATCY	2 cut(s)	1833, 2002
BstYI	RGATCY	2 cut(s)	1833, 2002
BstZ17I	GTATAC	1 cut(s)	1684
Bsu36I	CCTNAGG	1 cut(s)	1139
BsuRI	GGCC	4 cut(s)	36, 571, 1653, 1742
BtgI	CCRYGG	1 cut(s)	1837
BtgZI	GCGATG	1 cut(s)	2046
BtsCI	GGATG	9 cut(s)	24, 173, 469, 529, 835, 1305, 1492, 1785, 2107
BtsI	GCAGTG	1 cut(s)	1357
BtsIMutI	CAGTG	2 cut(s)	1357, 1547
Cac8I	GCNNGC	4 cut(s)	193, 607, 1303, 1717
CciI	TCATGA	1 cut(s)	1977
CfoI	GCGC	1 cut(s)	938
Cfr10I	RCCGGY	1 cut(s)	1742
Cfr13I	GGNCC	1 cut(s)	1740
DdeI	CTNAG	5 cut(s)	432, 1139, 1233, 1676, 2075
DpnI	GATC	8 cut(s)	797, 1227, 1435, 1593, 1728, 1835, 1853, 2004
DpnII	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
DraIII	CACNNNGTG	1 cut(s)	332
Eam1104I	CTCTTC	6 cut(s)	171, 256, 292, 502, 1453, 1557
EarI	CTCTTC	6 cut(s)	171, 256, 292, 502, 1453, 1557
Eco130I	CCWWGG	6 cut(s)	196, 479, 813, 1648, 1732, 1837
Eco147I	AGGCCT	1 cut(s)	36
Eco31I	GGTCTC	2 cut(s)	709, 1882
Eco57I	CTGAAG	1 cut(s)	1571
Eco81I	CCTNAGG	1 cut(s)	1139
Eco88I	CYCGRG	1 cut(s)	1323
EcoRI	GAATTC	1 cut(s)	454
EcoRII	CCWGG	2 cut(s)	1527, 2005
EcoT14I	CCWWGG	6 cut(s)	196, 479, 813, 1648, 1732, 1837
EcoT22I	ATGCAT	2 cut(s)	835, 1108
ErhI	CCWWGG	6 cut(s)	196, 479, 813, 1648, 1732, 1837
FalI	AAGNNNNNCTT	2 cut(s)	1768, 1800
FaqI	GGGAC	2 cut(s)	1997, 2072
FauNDI	CATATG	1 cut(s)	502
FblI	GTMKAC	2 cut(s)	1683, 1747
Fnu4HI	GCNGC	4 cut(s)	1545, 1866, 1935, 1938
FokI	GGATG	9 cut(s)	11, 160, 456, 536, 842, 1292, 1499, 1792, 2114
Fsp4HI	GCNGC	4 cut(s)	1545, 1866, 1935, 1938
FspBI	CTAG	3 cut(s)	1125, 1640, 1958
GlaI	GCGC	1 cut(s)	937
GluI	GCNGC	4 cut(s)	1545, 1866, 1935, 1938
HaeII	RGCGCY	1 cut(s)	939
HaeIII	GGCC	4 cut(s)	36, 571, 1653, 1742
HapII	CCGG	4 cut(s)	1635, 1743, 1869, 1892
HhaI	GCGC	1 cut(s)	938
Hin6I	GCGC	1 cut(s)	936
HinP1I	GCGC	1 cut(s)	936
HincII	GTYRAC	1 cut(s)	556
HindII	GTYRAC	1 cut(s)	556
HindIII	AAGCTT	2 cut(s)	415, 1239
HpaII	CCGG	4 cut(s)	1635, 1743, 1869, 1892
HphI	GGTGA	4 cut(s)	344, 623, 1544, 2034
Hpy166II	GTNNAC	6 cut(s)	335, 556, 825, 1420, 1684, 1748
Hpy188I	TCNGA	2 cut(s)	127, 1833
Hpy188III	TCNNGA	8 cut(s)	55, 449, 671, 731, 941, 1272, 1697, 1978
Hpy8I	GTNNAC	6 cut(s)	335, 556, 825, 1420, 1684, 1748
Hpy99I	CGWCG	1 cut(s)	737
HpyAV	CCTTC	9 cut(s)	73, 77, 1039, 1319, 1342, 1346, 1477, 1529, 1993
HpyCH4III	ACNGT	1 cut(s)	1688
HpyCH4IV	ACGT	2 cut(s)	735, 1375
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1238, 1328, 1789, 1808
HpyF3I	CTNAG	5 cut(s)	432, 1139, 1233, 1676, 2075
HpySE526I	ACGT	2 cut(s)	735, 1375
HspAI	GCGC	1 cut(s)	936
Kzo9I	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
LmnI	GCTCC	4 cut(s)	246, 1028, 1705, 1823
Lsp1109I	GCAGC	4 cut(s)	1531, 1877, 1921, 1924
LweI	GCATC	7 cut(s)	478, 517, 649, 820, 1314, 1662, 1770
MaeI	CTAG	3 cut(s)	1125, 1640, 1958
MaeII	ACGT	2 cut(s)	735, 1375
MaeIII	GTNAC	8 cut(s)	263, 400, 743, 1291, 1492, 1575, 1597, 1904
MalI	GATC	8 cut(s)	797, 1227, 1435, 1593, 1728, 1835, 1853, 2004
MboI	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
MboII	GAAGA	9 cut(s)	158, 243, 279, 489, 1184, 1470, 1492, 1574, 1777
MflI	RGATCY	2 cut(s)	1833, 2002
MhlI	GDGCHC	2 cut(s)	1324, 1710
MlyI	GAGTC	2 cut(s)	977, 1533
MmeI	TCCRAC	3 cut(s)	1811, 1928, 2079
Mph1103I	ATGCAT	2 cut(s)	835, 1108
MroXI	GAANNNNTTC	2 cut(s)	339, 1352
MseI	TTAA	8 cut(s)	420, 507, 876, 1035, 1098, 1916, 2108, 2117
MslI	CAYNNNNRTG	3 cut(s)	857, 1511, 1778
MspA1I	CMGCKG	1 cut(s)	140
MspI	CCGG	4 cut(s)	1635, 1743, 1869, 1892
MspR9I	CCNGG	3 cut(s)	1529, 1870, 2007
Mva1269I	GAATGC	3 cut(s)	215, 793, 1414
MvaI	CCWGG	2 cut(s)	1529, 2007
MwoI	GCNNNNNNNGC	4 cut(s)	1238, 1328, 1789, 1808
NciI	CCSGG	1 cut(s)	1870
NcoI	CCATGG	1 cut(s)	1837
NdeI	CATATG	1 cut(s)	502
NdeII	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
NlaIV	GGNNCC	4 cut(s)	390, 1030, 1835, 2004
NmuCI	GTSAC	2 cut(s)	263, 743
NsiI	ATGCAT	2 cut(s)	835, 1108
NspI	RCATGY	5 cut(s)	823, 856, 1426, 1830, 1930
PagI	TCATGA	1 cut(s)	1977
PceI	AGGCCT	1 cut(s)	36
PciI	ACATGT	2 cut(s)	1422, 1926
PctI	GAATGC	3 cut(s)	215, 793, 1414
PdmI	GAANNNNTTC	2 cut(s)	339, 1352
PfeI	GAWTC	8 cut(s)	60, 149, 161, 484, 773, 1066, 1469, 2132
PkrI	GCNGC	4 cut(s)	1546, 1867, 1936, 1939
PleI	GAGTC	2 cut(s)	977, 1532
PpsI	GAGTC	2 cut(s)	977, 1532
PscI	ACATGT	2 cut(s)	1422, 1926
Psp6I	CCWGG	2 cut(s)	1527, 2005
PspGI	CCWGG	2 cut(s)	1527, 2005
PspN4I	GGNNCC	4 cut(s)	390, 1030, 1835, 2004
PspPI	GGNCC	1 cut(s)	1740
PsuI	RGATCY	2 cut(s)	1833, 2002
PvuII	CAGCTG	1 cut(s)	140
RseI	CAYNNNNRTG	3 cut(s)	857, 1511, 1778
SaqAI	TTAA	8 cut(s)	420, 507, 876, 1035, 1098, 1916, 2108, 2117
SatI	GCNGC	4 cut(s)	1545, 1866, 1935, 1938
Sau3AI	GATC	8 cut(s)	795, 1225, 1433, 1591, 1726, 1833, 1851, 2002
Sau96I	GGNCC	1 cut(s)	1740
SchI	GAGTC	2 cut(s)	977, 1533
ScrFI	CCNGG	3 cut(s)	1529, 1870, 2007
SduI	GDGCHC	2 cut(s)	1324, 1710
SfaNI	GCATC	7 cut(s)	478, 517, 649, 820, 1314, 1662, 1770
SmiMI	CAYNNNNRTG	3 cut(s)	857, 1511, 1778
SmlI	CTYRAG	5 cut(s)	412, 449, 599, 913, 941
SmoI	CTYRAG	5 cut(s)	412, 449, 599, 913, 941
SseBI	AGGCCT	1 cut(s)	36
SsiI	CCGC	1 cut(s)	609
SspMI	CTAG	3 cut(s)	1125, 1640, 1958
StuI	AGGCCT	1 cut(s)	36
StyD4I	CCNGG	3 cut(s)	1527, 1868, 2005
StyI	CCWWGG	6 cut(s)	196, 479, 813, 1648, 1732, 1837
TaaI	ACNGT	1 cut(s)	1688
TaiI	ACGT	2 cut(s)	738, 1378
TaqI	TCGA	6 cut(s)	732, 753, 1064, 1228, 1478, 1725
TfiI	GAWTC	8 cut(s)	60, 149, 161, 484, 773, 1066, 1469, 2132
Tru1I	TTAA	8 cut(s)	420, 507, 876, 1035, 1098, 1916, 2108, 2117
Tru9I	TTAA	8 cut(s)	420, 507, 876, 1035, 1098, 1916, 2108, 2117
TscAI	CASTG	2 cut(s)	1364, 1554
TseFI	GTSAC	2 cut(s)	263, 743
TseI	GCWGC	4 cut(s)	1544, 1865, 1934, 1937
Tsp45I	GTSAC	2 cut(s)	263, 743
TspGWI	ACGGA	4 cut(s)	842, 1420, 2125, 2126
TspRI	CASTG	2 cut(s)	1364, 1554
XapI	RAATTY	7 cut(s)	202, 454, 679, 719, 1050, 1897, 2085
XceI	RCATGY	5 cut(s)	823, 856, 1426, 1830, 1930
XmiI	GTMKAC	2 cut(s)	1683, 1747
XmnI	GAANNNNTTC	2 cut(s)	339, 1352
XspI	CTAG	3 cut(s)	1125, 1640, 1958
Zsp2I	ATGCAT	2 cut(s)	835, 1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.