AT1G71680

Lysine histidine transporter-like 5

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
26944587 .. 26947219
2633 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G71680.2

Sequence Viewer

Length: 1347 bp
ATGACATACACAGCGAATGACGAGGAGAACAAAGGAAGATCAACGGACAATAACAATCACCGTCAAATGGATTACAACGATTGGTTACCAGTCACAGCGTCTAGAGAAGCCAAATGGTATTACTCCGCCTTCCACAATGTCACGGCCATGGTTGGCGCCGGAGTTCTTGGTCTCCCTTTCGCCATGTCACAACTTGGCTGGGGACCTGGACTTGTTGCTATAATAATGTCATGGGCTATAACGTTCTACTCGTTATGGCAAATGGTACAGTTGCACGAAGCCGTTCCAGGGAAACGGTTGGACCGTTACCCCGAGCTAGGGCAAGAAGCTTTTGGACCAAAACTAGGTTACTGGATCGTCATGCCGCAACAGCTTCTTGTCCAAATCGCTTCCGACATAGTCTACAACGTGACAGGAGGAAAATCTCTCAAGAAATTTGTCGAGCTTCTATTTCCGAATCTCGAACATATCCGTCAGACTTATTACATCCTTGGATTCGCCGCGCTTCAGCTTGTCCTCTCTCAATCTCCTGATTTCAACTCCATCAAGATCGTCTCTCTCCTCGCCGCCCTCATGTCTTTCCTTTACTCAATGATAGCTTCGGTGGCGTCAATAGCAAAAGGAACGGAACACCGTCCTTCAACTTACGGAGTCAGGGGAGACACGGTGGCCTCAATGGTCTTTGATGCATTTAACGGCATTGGAACCATAGCGTTTGCGTTTGCAGGACACAGTGTGGTTCTTGAGATCCAAGCAACTATTCCTTCAACACCTGAAGTGCCTTCCAAGAAACCAATGTGGAAAGGAGTTGTTGTAGCTTACATAATCGTCATCATTTGTTACCTTTTTGTGGCTATCTCCGGCTATTGGGCGTTTGGGGCTCATGTTGAGGATGATGTTCTCATTTCCTTAGAGAGACCAGCTTGGCTTATAGCGGCTGCTAACTTCATGGTTTTTATCCATGTCATAGGAAGTTATCAGGTTTTTGCGATGATTGTGTTTGACACGATCGAGTCTTATCTTGTGAAAACACTGAAATTCACTCCTTCAACAACACTGCGTCTAGTCGCACGTAGTACATATGTTGCATTGATTTGTCTTGTAGCAGTTTGTATCCCCTTTTTCGGAGGTCTTTTAGGGTTCTTCGGCGGTCTTGTCTTCTCATCAACCTCGTACTTCTTGCCTTGCATTATATGGTTGATAATGAAGCGACCAAAAAGATTTAGCGCCCATTGGTGGTGTTCTTGGGTAGCAATAGTCACTGGTATCTCGATAGCGATTCTTGCGCCCATTGGAGGAATGAGACACATTATTCTTTCAGCAAGAACCTACAAGCTCTTCTCATAG

Protein Analysis

448

Amino Acids

49.79

Weight (kDa)

8.91

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 36 - 362 4e-75 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 48 - 203 7.7e-09 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 155
AccI GTMKAC 1 cut(s) 402
AccII CGCG 1 cut(s) 503
AciI CCGC 6 cut(s) 126, 365, 501, 567, 935, 1149
AclI AACGTT 1 cut(s) 242
AclWI GGATC 2 cut(s) 362, 742
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 2 cut(s) 434, 1037
AcuI CTGAAG 2 cut(s) 491, 795
AcyI GRCGYC 2 cut(s) 156, 608
AdeI CACNNNGTG 1 cut(s) 736
AfaI GTAC 3 cut(s) 267, 1078, 1175
AgsI TTSAA 4 cut(s) 538, 642, 768, 1050
AjnI CCWGG 2 cut(s) 205, 286
AjuI GAANNNNNNNTTGG 2 cut(s) 744, 776
AluBI AGCT 9 cut(s) 316, 329, 373, 445, 511, 599, 818, 923, 1336
AluI AGCT 9 cut(s) 316, 329, 373, 445, 511, 599, 818, 923, 1336
Alw26I GTCTC 5 cut(s) 176, 559, 654, 910, 1297
AlwI GGATC 2 cut(s) 362, 742
Ama87I CYCGRG 1 cut(s) 311
AoxI GGCC 2 cut(s) 144, 669
ApeKI GCWGC 1 cut(s) 938
ApoI RAATTY 2 cut(s) 434, 1037
Asp700I GAANNNNTTC 1 cut(s) 282
AspLEI GCGC 4 cut(s) 158, 505, 1229, 1288
AspS9I GGNCC 3 cut(s) 203, 301, 335
AsuHPI GGTGA 1 cut(s) 50
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 3 cut(s) 203, 301, 335
BanI GGYRCC 1 cut(s) 155
BanII GRGCYC 1 cut(s) 883
BbsI GAAGAC 1 cut(s) 1150
BbvI GCAGC 1 cut(s) 925
BccI CCATC 1 cut(s) 551
BceAI ACGGC 3 cut(s) 159, 266, 712
BciT130I CCWGG 2 cut(s) 207, 288
BciVI GTATCC 1 cut(s) 1124
BcoDI GTCTC 5 cut(s) 176, 559, 654, 910, 1297
BfaI CTAG 4 cut(s) 102, 317, 344, 1064
BfoI RGCGCY 2 cut(s) 159, 1230
BfuI GTATCC 1 cut(s) 1124
BisI GCNGC 5 cut(s) 365, 501, 567, 936, 939
BlsI GCNGC 5 cut(s) 366, 502, 568, 937, 940
Bme1390I CCNGG 2 cut(s) 207, 288
Bme18I GGWCC 3 cut(s) 203, 301, 335
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 3 cut(s) 203, 301, 335
BmiI GGNNCC 3 cut(s) 157, 204, 706
BmrFI CCNGG 2 cut(s) 207, 288
BmsI GCATC 1 cut(s) 676
BpiI GAAGAC 1 cut(s) 1150
BpuEI CTTGAG 2 cut(s) 413, 764
BsaAI YACGTR 1 cut(s) 1073
BsaHI GRCGYC 2 cut(s) 156, 608
BsaI GGTCTC 2 cut(s) 176, 910
BsaJI CCNNGG 3 cut(s) 147, 287, 490
BsaXI ACNNNNNCTCC 4 cut(s) 651, 681, 798, 828
Bse1I ACTGG 3 cut(s) 89, 356, 1267
BseBI CCWGG 2 cut(s) 207, 288
BseDI CCNNGG 3 cut(s) 147, 287, 490
BseGI GGATG 2 cut(s) 486, 898
BseNI ACTGG 3 cut(s) 89, 356, 1267
BseRI GAGGAG 2 cut(s) 38, 551
BseXI GCAGC 1 cut(s) 925
BseYI CCCAGC 1 cut(s) 198
Bsh1236I CGCG 1 cut(s) 503
Bsh1285I CGRYCG 1 cut(s) 1011
BshFI GGCC 2 cut(s) 146, 671
BshNI GGYRCC 1 cut(s) 155
BsiEI CGRYCG 1 cut(s) 1011
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 2 cut(s) 159, 861
BslFI GGGAC 1 cut(s) 216
BsmAI GTCTC 5 cut(s) 176, 559, 654, 910, 1297
BsmBI CGTCTC 1 cut(s) 559
BsmFI GGGAC 1 cut(s) 216
BsnI GGCC 2 cut(s) 146, 671
Bso31I GGTCTC 2 cut(s) 176, 910
BsoBI CYCGRG 1 cut(s) 311
Bsp1286I GDGCHC 1 cut(s) 883
Bsp143I GATC 5 cut(s) 38, 354, 549, 747, 1008
Bsp19I CCATGG 1 cut(s) 147
BspACI CCGC 6 cut(s) 126, 365, 501, 567, 935, 1149
BspANI GGCC 2 cut(s) 146, 671
BspFNI CGCG 1 cut(s) 503
BspLI GGNNCC 3 cut(s) 157, 204, 706
BspPI GGATC 2 cut(s) 362, 742
BspQI GCTCTTC 1 cut(s) 1343
BspT107I GGYRCC 1 cut(s) 155
BspTNI GGTCTC 2 cut(s) 176, 910
BsrI ACTGG 3 cut(s) 89, 356, 1267
BssECI CCNNGG 3 cut(s) 147, 287, 490
BssMI GATC 5 cut(s) 38, 354, 549, 747, 1008
BssNI GRCGYC 2 cut(s) 156, 608
BssT1I CCWWGG 2 cut(s) 147, 490
Bst2UI CCWGG 2 cut(s) 207, 288
Bst4CI ACNGT 7 cut(s) 62, 270, 297, 305, 635, 667, 734
Bst6I CTCTTC 1 cut(s) 1343
BstACI GRCGYC 2 cut(s) 156, 608
BstBAI YACGTR 1 cut(s) 1073
BstDEI CTNAG 1 cut(s) 910
BstDSI CCRYGG 1 cut(s) 147
BstEII GGTNACC 1 cut(s) 84
BstF5I GGATG 2 cut(s) 486, 898
BstFNI CGCG 1 cut(s) 503
BstH2I RGCGCY 2 cut(s) 159, 1230
BstHHI GCGC 4 cut(s) 158, 505, 1229, 1288
BstKTI GATC 5 cut(s) 41, 357, 552, 750, 1011
BstMAI GTCTC 5 cut(s) 176, 559, 654, 910, 1297
BstMBI GATC 5 cut(s) 38, 354, 549, 747, 1008
BstMCI CGRYCG 1 cut(s) 1011
BstMWI GCNNNNNNNGC 5 cut(s) 370, 605, 614, 878, 1283
BstNI CCWGG 2 cut(s) 207, 288
BstPI GGTNACC 1 cut(s) 84
BstSCI CCNGG 2 cut(s) 205, 286
BstUI CGCG 1 cut(s) 503
BstV1I GCAGC 1 cut(s) 925
BstV2I GAAGAC 1 cut(s) 1150
BstX2I RGATCY 1 cut(s) 747
BstYI RGATCY 1 cut(s) 747
BsuI GTATCC 1 cut(s) 1124
BsuRI GGCC 2 cut(s) 146, 671
BtgI CCRYGG 1 cut(s) 147
BtgZI GCGATG 1 cut(s) 1004
BtsCI GGATG 2 cut(s) 486, 898
BtsI GCAGTG 1 cut(s) 1055
BtsIMutI CAGTG 4 cut(s) 739, 1031, 1055, 1260
CfoI GCGC 4 cut(s) 158, 505, 1229, 1288
Cfr13I GGNCC 3 cut(s) 203, 301, 335
CseI GACGC 3 cut(s) 87, 597, 1049
Csp6I GTAC 3 cut(s) 266, 1077, 1174
CviAII CATG 8 cut(s) 148, 184, 231, 361, 574, 884, 949, 962
CviQI GTAC 3 cut(s) 266, 1077, 1174
DdeI CTNAG 1 cut(s) 910
DinI GGCGCC 1 cut(s) 157
DpnI GATC 5 cut(s) 40, 356, 551, 749, 1010
DpnII GATC 5 cut(s) 38, 354, 549, 747, 1008
DraIII CACNNNGTG 1 cut(s) 736
EaeI YGGCCR 1 cut(s) 144
Eam1104I CTCTTC 1 cut(s) 1343
EarI CTCTTC 1 cut(s) 1343
EciI GGCGGA 1 cut(s) 115
Eco130I CCWWGG 2 cut(s) 147, 490
Eco24I GRGCYC 1 cut(s) 883
Eco31I GGTCTC 2 cut(s) 176, 910
Eco47I GGWCC 3 cut(s) 203, 301, 335
Eco57I CTGAAG 2 cut(s) 491, 795
Eco88I CYCGRG 1 cut(s) 311
Eco91I GGTNACC 1 cut(s) 84
EcoO109I RGGNCCY 1 cut(s) 203
EcoO65I GGTNACC 1 cut(s) 84
EcoRII CCWGG 2 cut(s) 205, 286
EcoT14I CCWWGG 2 cut(s) 147, 490
EcoT22I ATGCAT 1 cut(s) 691
EcoT38I GRGCYC 1 cut(s) 883
EgeI GGCGCC 1 cut(s) 157
EheI GGCGCC 1 cut(s) 157
ErhI CCWWGG 2 cut(s) 147, 490
Esp3I CGTCTC 1 cut(s) 559
FaeI CATG 8 cut(s) 151, 187, 234, 364, 577, 887, 952, 965
FaqI GGGAC 1 cut(s) 216
FatI CATG 8 cut(s) 147, 183, 230, 360, 573, 883, 948, 961
FauNDI CATATG 1 cut(s) 1081
FblI GTMKAC 1 cut(s) 402
Fnu4HI GCNGC 5 cut(s) 365, 501, 567, 936, 939
FokI GGATG 2 cut(s) 473, 905
FriOI GRGCYC 1 cut(s) 883
Fsp4HI GCNGC 5 cut(s) 365, 501, 567, 936, 939
FspBI CTAG 4 cut(s) 102, 317, 344, 1064
GlaI GCGC 4 cut(s) 157, 504, 1228, 1287
GluI GCNGC 5 cut(s) 365, 501, 567, 936, 939
GsaI CCCAGC 1 cut(s) 202
HaeII RGCGCY 2 cut(s) 159, 1230
HaeIII GGCC 2 cut(s) 146, 671
HapII CCGG 2 cut(s) 159, 861
HgaI GACGC 3 cut(s) 87, 597, 1049
HhaI GCGC 4 cut(s) 158, 505, 1229, 1288
Hin1I GRCGYC 2 cut(s) 156, 608
Hin1II CATG 8 cut(s) 151, 187, 234, 364, 577, 887, 952, 965
Hin6I GCGC 4 cut(s) 156, 503, 1227, 1286
HinP1I GCGC 4 cut(s) 156, 503, 1227, 1286
HindIII AAGCTT 1 cut(s) 327
HinfI GANTC 5 cut(s) 457, 495, 651, 1013, 1279
HpaII CCGG 2 cut(s) 159, 861
HphI GGTGA 1 cut(s) 50
Hpy166II GTNNAC 1 cut(s) 403
Hpy188I TCNGA 4 cut(s) 394, 456, 477, 1127
Hpy188III TCNNGA 7 cut(s) 102, 430, 461, 530, 547, 743, 1270
Hpy8I GTNNAC 1 cut(s) 403
HpyAV CCTTC 5 cut(s) 139, 648, 774, 792, 1056
HpyCH4III ACNGT 7 cut(s) 62, 270, 297, 305, 635, 667, 734
HpyCH4IV ACGT 3 cut(s) 242, 408, 1072
HpyCH4V TGCA 5 cut(s) 274, 689, 725, 1088, 1188
HpyF10VI GCNNNNNNNGC 5 cut(s) 370, 605, 614, 878, 1283
HpyF3I CTNAG 1 cut(s) 910
HpySE526I ACGT 3 cut(s) 242, 408, 1072
Hsp92I GRCGYC 2 cut(s) 156, 608
Hsp92II CATG 8 cut(s) 151, 187, 234, 364, 577, 887, 952, 965
HspAI GCGC 4 cut(s) 156, 503, 1227, 1286
KasI GGCGCC 1 cut(s) 155
Kzo9I GATC 5 cut(s) 38, 354, 549, 747, 1008
LguI GCTCTTC 1 cut(s) 1343
Lsp1109I GCAGC 1 cut(s) 925
LweI GCATC 1 cut(s) 676
MaeI CTAG 4 cut(s) 102, 317, 344, 1064
MaeII ACGT 3 cut(s) 242, 408, 1072
MaeIII GTNAC 9 cut(s) 84, 91, 139, 186, 305, 347, 409, 839, 1258
MalI GATC 5 cut(s) 40, 356, 551, 749, 1010
MboI GATC 5 cut(s) 38, 354, 549, 747, 1008
MboII GAAGA 4 cut(s) 48, 1135, 1150, 1330
MflI RGATCY 1 cut(s) 747
MhlI GDGCHC 1 cut(s) 883
MluCI AATT 2 cut(s) 434, 1037
Mly113I GGCGCC 1 cut(s) 156
MlyI GAGTC 2 cut(s) 660, 1022
MmeI TCCRAC 2 cut(s) 279, 417
Mph1103I ATGCAT 1 cut(s) 691
MroXI GAANNNNTTC 1 cut(s) 282
MseI TTAA 1 cut(s) 693
MslI CAYNNNNRTG 1 cut(s) 146
MspI CCGG 2 cut(s) 159, 861
MspR9I CCNGG 2 cut(s) 207, 288
MvaI CCWGG 2 cut(s) 207, 288
MvnI CGCG 1 cut(s) 503
MwoI GCNNNNNNNGC 5 cut(s) 370, 605, 614, 878, 1283
NarI GGCGCC 1 cut(s) 156
NcoI CCATGG 1 cut(s) 147
NdeI CATATG 1 cut(s) 1081
NdeII GATC 5 cut(s) 38, 354, 549, 747, 1008
NlaIII CATG 8 cut(s) 151, 187, 234, 364, 577, 887, 952, 965
NlaIV GGNNCC 3 cut(s) 157, 204, 706
NmuCI GTSAC 5 cut(s) 91, 139, 186, 409, 1258
NsiI ATGCAT 1 cut(s) 691
PciSI GCTCTTC 1 cut(s) 1343
PcsI WCGNNNNNNNCGW 2 cut(s) 248, 301
PdmI GAANNNNTTC 1 cut(s) 282
PfeI GAWTC 3 cut(s) 457, 495, 1279
PflFI GACNNNGTC 1 cut(s) 398
PkrI GCNGC 5 cut(s) 366, 502, 568, 937, 940
Ple19I CGATCG 1 cut(s) 1011
PleI GAGTC 2 cut(s) 659, 1021
PluTI GGCGCC 1 cut(s) 159
PpsI GAGTC 2 cut(s) 659, 1021
Ppu21I YACGTR 1 cut(s) 1073
PpuMI RGGWCCY 1 cut(s) 203
Psp1406I AACGTT 1 cut(s) 242
Psp5II RGGWCCY 1 cut(s) 203
Psp6I CCWGG 2 cut(s) 205, 286
PspEI GGTNACC 1 cut(s) 84
PspFI CCCAGC 1 cut(s) 198
PspGI CCWGG 2 cut(s) 205, 286
PspN4I GGNNCC 3 cut(s) 157, 204, 706
PspPI GGNCC 3 cut(s) 203, 301, 335
PspPPI RGGWCCY 1 cut(s) 203
PsuI RGATCY 1 cut(s) 747
PsyI GACNNNGTC 1 cut(s) 398
PvuI CGATCG 1 cut(s) 1011
RsaI GTAC 3 cut(s) 267, 1078, 1175
RsaNI GTAC 3 cut(s) 266, 1077, 1174
RseI CAYNNNNRTG 1 cut(s) 146
SapI GCTCTTC 1 cut(s) 1343
SaqAI TTAA 1 cut(s) 693
SatI GCNGC 5 cut(s) 365, 501, 567, 936, 939
Sau3AI GATC 5 cut(s) 38, 354, 549, 747, 1008
Sau96I GGNCC 3 cut(s) 203, 301, 335
SchI GAGTC 2 cut(s) 660, 1022
ScrFI CCNGG 2 cut(s) 207, 288
SduI GDGCHC 1 cut(s) 883
SfaNI GCATC 1 cut(s) 676
SfoI GGCGCC 1 cut(s) 157
SinI GGWCC 3 cut(s) 203, 301, 335
SmiMI CAYNNNNRTG 1 cut(s) 146
SmlI CTYRAG 2 cut(s) 428, 743
SmoI CTYRAG 2 cut(s) 428, 743
Sse9I AATT 2 cut(s) 434, 1037
SsiI CCGC 6 cut(s) 126, 365, 501, 567, 935, 1149
SspDI GGCGCC 1 cut(s) 155
SspMI CTAG 4 cut(s) 102, 317, 344, 1064
StyD4I CCNGG 2 cut(s) 205, 286
StyI CCWWGG 2 cut(s) 147, 490
TaaI ACNGT 7 cut(s) 62, 270, 297, 305, 635, 667, 734
TaiI ACGT 3 cut(s) 245, 411, 1075
TaqI TCGA 4 cut(s) 441, 462, 1011, 1271
TasI AATT 2 cut(s) 434, 1037
TatI WGTACW 1 cut(s) 1076
TauI GCSGC 4 cut(s) 367, 503, 569, 938
TfiI GAWTC 3 cut(s) 457, 495, 1279
Tru1I TTAA 1 cut(s) 693
Tru9I TTAA 1 cut(s) 693
TscAI CASTG 4 cut(s) 739, 1038, 1062, 1267
TseFI GTSAC 5 cut(s) 91, 139, 186, 409, 1258
TseI GCWGC 1 cut(s) 938
Tsp45I GTSAC 5 cut(s) 91, 139, 186, 409, 1258
TspDTI ATGAA 2 cut(s) 937, 1220
TspGWI ACGGA 4 cut(s) 59, 461, 641, 663
TspRI CASTG 4 cut(s) 739, 1038, 1062, 1267
Tth111I GACNNNGTC 1 cut(s) 398
VpaK11BI GGWCC 3 cut(s) 203, 301, 335
XapI RAATTY 2 cut(s) 434, 1037
XbaI TCTAGA 1 cut(s) 101
XmiI GTMKAC 1 cut(s) 402
XmnI GAANNNNTTC 1 cut(s) 282
XspI CTAG 4 cut(s) 102, 317, 344, 1064
Zsp2I ATGCAT 1 cut(s) 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.