Rorug07G0265400

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
25070576 .. 25071646
1071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0265400.1

Sequence Viewer

Length: 786 bp
ATGGCAAACATCGGTGGAGGTGGAAATGATCCAGCATGGAAGTACGCAATTTCTGTGGAAGGAAATCGATATGGTACAACATGTATATTTTGTTTTGCCACTTTTAAAAGTGGAGGGATTACAAGATTGAAGAGTCATTTATCGGGTTATGATCCTCACAAGAGTGTAAAGAAATGTGATAAGGTGCCACCGGAGATCAAAACAGAGGTGATAGCATGGATAAAGAAAAAAGAATCTATTAAGCAAGAAAAGGCAGCTGTTCAAGATGATATTAGAGAAGAACTCCGCAATGATTATCTTGGCAATCAAACAAGTCTGTACAATGACGACGACAATGATGATGATGATGGATTTCAGTATCCACCAGACATGCACCCAACAGAACGACAAGATTATCGTGCTGCAGTAAGACGATCAACCGTAGATCGTGATAAGAACTCTCAGTTTAGTAGAAGTGCAAGATTTCAATTTCCAAAACAATCGAGAGGTGGTAGTAGCAGTCAACAACCGCAACAAGTTGATCGATCAAAAACCTATCGGTACTCATTTCCTGAGCCTCCAGTAGCAATGCCATCAAAAGATAGTCGATCAAAACAAGGCACAATTAAATCATTACTAAAAGGTGGTAGAGAACTATTGGCAACAATGGTGTCCAAATACCACATATATGATGCTGTCCCTTTTAACAAAGTTGATTCTCCACATTTTCAAAACATGTTGACTACAGCTGGAAATCTAGGTAAATTATATTGTATTTACATATTTCTTCATGGACAATTATGTTAA

Protein Analysis

261

Amino Acids

29.55

Weight (kDa)

9.12

Isoelectric Point (pI)

55.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 184
AciI CCGC 2 cut(s) 286, 509
AclWI GGATC 2 cut(s) 23, 146
AfaI GTAC 4 cut(s) 44, 76, 320, 542
AflIII ACRYGT 2 cut(s) 80, 714
AgsI TTSAA 4 cut(s) 130, 263, 467, 710
AleI CACNNNNGTG 1 cut(s) 162
AluBI AGCT 2 cut(s) 257, 728
AluI AGCT 2 cut(s) 257, 728
AlwI GGATC 2 cut(s) 23, 146
ApeKI GCWGC 2 cut(s) 254, 401
AsuHPI GGTGA 1 cut(s) 220
BanI GGYRCC 1 cut(s) 184
BbvI GCAGC 2 cut(s) 266, 388
BccI CCATC 2 cut(s) 341, 580
BciVI GTATCC 1 cut(s) 369
BfaI CTAG 1 cut(s) 737
BfmI CTRYAG 2 cut(s) 402, 723
BfuI GTATCC 1 cut(s) 369
BisI GCNGC 2 cut(s) 255, 402
BlsI GCNGC 2 cut(s) 256, 403
BmiI GGNNCC 1 cut(s) 186
BmsI GCATC 1 cut(s) 661
BplI GAGNNNNNCTC 2 cut(s) 267, 299
BpmI CTGGAG 1 cut(s) 543
Bpu10I CCTNAGC 1 cut(s) 552
Bsa29I ATCGAT 2 cut(s) 67, 523
BsaWI WCCGGW 1 cut(s) 190
Bse1I ACTGG 1 cut(s) 560
Bse3DI GCAATG 2 cut(s) 295, 573
BseCI ATCGAT 2 cut(s) 67, 523
BseMI GCAATG 2 cut(s) 295, 573
BseMII CTCAG 2 cut(s) 455, 543
BseNI ACTGG 1 cut(s) 560
BseXI GCAGC 2 cut(s) 266, 388
BshNI GGYRCC 1 cut(s) 184
BshVI ATCGAT 2 cut(s) 67, 523
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 1 cut(s) 662
BsmFI GGGAC 1 cut(s) 662
Bsp1407I TGTACA 1 cut(s) 318
Bsp143I GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
BspACI CCGC 2 cut(s) 286, 509
BspCNI CTCAG 2 cut(s) 454, 544
BspDI ATCGAT 2 cut(s) 67, 523
BspLI GGNNCC 1 cut(s) 186
BspMAI CTGCAG 1 cut(s) 406
BspPI GGATC 2 cut(s) 23, 146
BspT107I GGYRCC 1 cut(s) 184
BsrDI GCAATG 2 cut(s) 295, 573
BsrGI TGTACA 1 cut(s) 318
BsrI ACTGG 1 cut(s) 560
BssMI GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
Bst4CI ACNGT 1 cut(s) 421
Bst6I CTCTTC 1 cut(s) 125
BstAUI TGTACA 1 cut(s) 318
BstDEI CTNAG 2 cut(s) 441, 552
BstKTI GATC 8 cut(s) 31, 154, 198, 416, 427, 523, 527, 590
BstMBI GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
BstNSI RCATGY 3 cut(s) 84, 373, 718
BstSFI CTRYAG 2 cut(s) 402, 723
BstV1I GCAGC 2 cut(s) 266, 388
Bsu15I ATCGAT 2 cut(s) 67, 523
BsuI GTATCC 1 cut(s) 369
BsuTUI ATCGAT 2 cut(s) 67, 523
ClaI ATCGAT 2 cut(s) 67, 523
Csp6I GTAC 4 cut(s) 43, 75, 319, 541
CspCI CAANNNNNGTGG 2 cut(s) 36, 71
CviAII CATG 6 cut(s) 36, 81, 216, 370, 715, 770
CviJI RGCY 3 cut(s) 257, 556, 728
CviKI_1 RGCY 3 cut(s) 257, 556, 728
CviQI GTAC 4 cut(s) 43, 75, 319, 541
DdeI CTNAG 2 cut(s) 441, 552
DpnI GATC 8 cut(s) 30, 153, 197, 415, 426, 522, 526, 589
DpnII GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
DraI TTTAAA 1 cut(s) 106
Eam1104I CTCTTC 1 cut(s) 125
EarI CTCTTC 1 cut(s) 125
FaeI CATG 6 cut(s) 39, 84, 219, 373, 718, 773
FaqI GGGAC 1 cut(s) 662
FatI CATG 6 cut(s) 35, 80, 215, 369, 714, 769
Fnu4HI GCNGC 2 cut(s) 255, 402
Fsp4HI GCNGC 2 cut(s) 255, 402
FspBI CTAG 1 cut(s) 737
GluI GCNGC 2 cut(s) 255, 402
GsuI CTGGAG 1 cut(s) 543
HapII CCGG 1 cut(s) 191
Hin1II CATG 6 cut(s) 39, 84, 219, 373, 718, 773
HincII GTYRAC 2 cut(s) 503, 720
HindII GTYRAC 2 cut(s) 503, 720
HinfI GANTC 3 cut(s) 133, 233, 695
HpaII CCGG 1 cut(s) 191
HphI GGTGA 1 cut(s) 220
Hpy166II GTNNAC 2 cut(s) 503, 720
Hpy188III TCNNGA 4 cut(s) 263, 428, 483, 551
Hpy8I GTNNAC 2 cut(s) 503, 720
Hpy99I CGWCG 1 cut(s) 332
HpyAV CCTTC 1 cut(s) 53
HpyCH4III ACNGT 1 cut(s) 421
HpyCH4V TGCA 3 cut(s) 373, 404, 458
HpyF3I CTNAG 2 cut(s) 441, 552
Hsp92II CATG 6 cut(s) 39, 84, 219, 373, 718, 773
Kzo9I GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
LpnPI CCDG 6 cut(s) 45, 204, 378, 564, 573, 714
Lsp1109I GCAGC 2 cut(s) 266, 388
LweI GCATC 1 cut(s) 661
MaeI CTAG 1 cut(s) 737
MalI GATC 8 cut(s) 30, 153, 197, 415, 426, 522, 526, 589
MboI GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
MboII GAAGA 3 cut(s) 142, 290, 758
MluCI AATT 5 cut(s) 48, 467, 603, 743, 776
MlyI GAGTC 1 cut(s) 142
MnlI CCTC 6 cut(s) 11, 107, 165, 199, 479, 567
MseI TTAA 5 cut(s) 105, 240, 606, 684, 784
MslI CAYNNNNRTG 2 cut(s) 162, 666
MspA1I CMGCKG 2 cut(s) 257, 728
MspI CCGG 1 cut(s) 191
NdeII GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
NlaIII CATG 6 cut(s) 39, 84, 219, 373, 718, 773
NlaIV GGNNCC 1 cut(s) 186
NspI RCATGY 3 cut(s) 84, 373, 718
OliI CACNNNNGTG 1 cut(s) 162
PciI ACATGT 2 cut(s) 80, 714
PfeI GAWTC 2 cut(s) 233, 695
PkrI GCNGC 2 cut(s) 256, 403
PleI GAGTC 1 cut(s) 141
PpsI GAGTC 1 cut(s) 141
PscI ACATGT 2 cut(s) 80, 714
PspN4I GGNNCC 1 cut(s) 186
PstI CTGCAG 1 cut(s) 406
PvuII CAGCTG 2 cut(s) 257, 728
RsaI GTAC 4 cut(s) 44, 76, 320, 542
RsaNI GTAC 4 cut(s) 43, 75, 319, 541
RseI CAYNNNNRTG 2 cut(s) 162, 666
SaqAI TTAA 5 cut(s) 105, 240, 606, 684, 784
SatI GCNGC 2 cut(s) 255, 402
Sau3AI GATC 8 cut(s) 28, 151, 195, 413, 424, 520, 524, 587
SchI GAGTC 1 cut(s) 142
SetI ASST 9 cut(s) 22, 186, 210, 259, 490, 536, 625, 730, 742
SfaNI GCATC 1 cut(s) 661
SfcI CTRYAG 2 cut(s) 402, 723
SmiMI CAYNNNNRTG 2 cut(s) 162, 666
Sse9I AATT 5 cut(s) 48, 467, 603, 743, 776
SsiI CCGC 2 cut(s) 286, 509
SspMI CTAG 1 cut(s) 737
TaaI ACNGT 1 cut(s) 421
TaqI TCGA 4 cut(s) 67, 482, 523, 586
TasI AATT 5 cut(s) 48, 467, 603, 743, 776
TatI WGTACW 1 cut(s) 318
TfiI GAWTC 2 cut(s) 233, 695
Tru1I TTAA 5 cut(s) 105, 240, 606, 684, 784
Tru9I TTAA 5 cut(s) 105, 240, 606, 684, 784
TseI GCWGC 2 cut(s) 254, 401
TspDTI ATGAA 1 cut(s) 758
XceI RCATGY 3 cut(s) 84, 373, 718
XspI CTAG 1 cut(s) 737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.