AT1G73150

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
27503973 .. 27506406
2434 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G73150.2

Sequence Viewer

Length: 1386 bp
ATGGCGTCTGGTCCTATAGCTGGTGGTGGAGTTTCGAAGACGAAGCATAAATGGAGTGATAGTGGCAACAAAAGCCAAAAACGATCCAAGCCCACGGTGGCGAATTCGAATTCGCTTGGGTTGGAAGATAATCATCAGATGATGAAGATAAGTTTAAGCTCAATTTCCAAGCTTGAAGTTAGGAACTTGAAGCGGAAACTACAAGCTGAGCTTGAGGAAGTTAGGAGCTTGATCAAACGGCTCGAACCACAAGGTAACAACTTCGCTCCCGTGCCGAACAAGAAGCTGAAAACAGCAAACGGTGGTAAGAAAGGTGGAGTACATGGAGCTGCTGCTGATAAAGGTACTGTTCAGATTTTGAAGAGCTGCAACAATTTGCTTACCAAGTTAATGAAGCATAAGTCTGGATGGATTTTCAATACTCCAGTTGATGTAGTTACGCTTGGTTTACATGATTATCACAATATTATTAAGGAGCCTATGGATTTAGGAACAGTGAAGACTAGGTTGAGTAAGAGTTTGTATAAGTCACCTTTGGAGTTTGCTGAGGATGTCAGACTTACTTTTAACAATGCAATGCTGTATAATCCTGTGGGGCATGATGTGTATCATATGGCTGAGATTTTGTTGAATCTGTTTGAAGAGAAATGGGTGCCTCTTGAAACGCAGTATGAGTTACTTATTAGGAAGCAACAACCAGTCCGTGATATCGATTTCCATGCTCCTGTTTCGACAAACACTCATAATGTAGAGGCGTTACCGTTACCCGCTCCTACACCTTCCCTGTCTCCTCCTCCTCCTCCTAAAGTAGTTGAAAATAGGACTTTGGAGAGAGCTGAATCTATGACAAACCCAGTGAAACCTGCAGTTTTACCTGTTGTCCCCGAGAAGCTTGTAGAAGAGGCGTCTGCAAACAGGGACTTGACGTTTGATGAGAAGCGGCAACTAAGTGAAGACCTCCAGGATTTACCTTATGACAAGCTAGAGGCAGTTGTGCAGATTATAAAGAAGAGAACTCCAGAACTCTCTCAACAAGATGATGAGATTGAGTTAGATATTGATAGTCTTGATCTGGAAACACTTTGGGAGCTTTTCAGATTCGTGACTGAATATAAGGAGAGCTTAAGCAAGAAAAAGGAGGAACAGGGATTAGACTCAGAAAGAGATGCTGAATCTTTTCACAATAGTGTGCACGAATCGAACACGCTAGTAACTGGCCTTGAATCGTCAAAAGTTACTGAATTAGGTCATGTGGCATCTACTGTTCGACAAGAAGTAAATGTTGGAGGATCAAGTAGTTCTAACAGTTCTAGTAGTGGCTCAGGCTCGGGTTCTAGTGGCTCTGACAGTGATAGCTCAGGACATGAATCTGATACCGGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

461

Amino Acids

50.81

Weight (kDa)

5.92

Isoelectric Point (pI)

52.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 123 - 207 1e-19 Bromodomain
BET PF17035 308 - 369 2.8e-23 Bromodomain extra-terminal - transcription regulation
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1004
Acc36I ACCTGC 1 cut(s) 871
AccB1I GGYRCC 1 cut(s) 652
AccBSI CCGCTC 1 cut(s) 770
AciI CCGC 3 cut(s) 193, 768, 940
AclWI GGATC 2 cut(s) 78, 1297
AcsI RAATTY 2 cut(s) 103, 109
AcyI GRCGYC 2 cut(s) 5, 905
AfaI GTAC 2 cut(s) 321, 346
AfiI CCNNNNNNNGG 1 cut(s) 20
AflII CTTAAG 1 cut(s) 1123
AgeI ACCGGT 1 cut(s) 1376
AgsI TTSAA 9 cut(s) 176, 190, 361, 418, 631, 641, 662, 815, 1223
AjnI CCWGG 1 cut(s) 960
AjuI GAANNNNNNNTTGG 2 cut(s) 1266, 1298
AleI CACNNNNGTG 1 cut(s) 1185
Alw21I GWGCWC 1 cut(s) 1194
Alw26I GTCTC 1 cut(s) 792
Alw44I GTGCAC 1 cut(s) 1190
AlwI GGATC 2 cut(s) 78, 1297
Ama87I CYCGRG 2 cut(s) 884, 1327
AoxI GGCC 1 cut(s) 1216
ApaLI GTGCAC 1 cut(s) 1190
ApeKI GCWGC 3 cut(s) 329, 332, 366
ApoI RAATTY 2 cut(s) 103, 109
ArsI GACNNNNNNTTYG 2 cut(s) 911, 943
AsiGI ACCGGT 1 cut(s) 1376
Asp700I GAANNNNTTC 1 cut(s) 1176
AspS9I GGNCC 1 cut(s) 11
AsuHPI GGTGA 1 cut(s) 522
AsuII TTCGAA 2 cut(s) 35, 107
AvaI CYCGRG 2 cut(s) 884, 1327
AvaII GGWCC 1 cut(s) 11
BaeGI GKGCMC 1 cut(s) 1194
BanI GGYRCC 1 cut(s) 652
BbsI GAAGAC 3 cut(s) 44, 506, 960
Bbv12I GWGCWC 1 cut(s) 1194
BbvCI CCTCAGC 1 cut(s) 546
BbvI GCAGC 3 cut(s) 316, 319, 353
BccI CCATC 1 cut(s) 402
BceAI ACGGC 1 cut(s) 254
BcgI CGANNNNNNTGC 2 cut(s) 701, 735
BciT130I CCWGG 1 cut(s) 962
BclI TGATCA 1 cut(s) 231
BcoDI GTCTC 1 cut(s) 792
BfaI CTAG 5 cut(s) 504, 983, 1208, 1311, 1335
BfmI CTRYAG 2 cut(s) 15, 864
BfrI CTTAAG 1 cut(s) 1123
BfuAI ACCTGC 1 cut(s) 871
BisI GCNGC 4 cut(s) 330, 333, 367, 941
BlpI GCTNAGC 1 cut(s) 207
BlsI GCNGC 4 cut(s) 331, 334, 368, 942
Bme1390I CCNGG 1 cut(s) 962
Bme18I GGWCC 1 cut(s) 11
BmeT110I CYCGRG 2 cut(s) 884, 1327
BmgT120I GGNCC 1 cut(s) 11
BmiI GGNNCC 2 cut(s) 477, 654
BmrFI CCNGG 1 cut(s) 962
BmrI ACTGGG 1 cut(s) 848
BmsI GCATC 2 cut(s) 1156, 1265
BmuI ACTGGG 1 cut(s) 848
BpiI GAAGAC 3 cut(s) 44, 506, 960
BpmI CTGGAG 3 cut(s) 408, 944, 1002
Bpu10I CCTNAGC 3 cut(s) 546, 1321, 1357
Bpu1102I GCTNAGC 1 cut(s) 207
Bpu14I TTCGAA 2 cut(s) 35, 107
BpuEI CTTGAG 1 cut(s) 233
Bsa29I ATCGAT 1 cut(s) 711
BsaBI GATNNNNATC 2 cut(s) 132, 606
BsaHI GRCGYC 2 cut(s) 5, 905
BsaJI CCNNGG 1 cut(s) 93
BsaWI WCCGGW 1 cut(s) 1376
BsaXI ACNNNNNCTCC 2 cut(s) 46, 76
Bsc4I CCNNNNNNNGG 1 cut(s) 20
Bse118I RCCGGY 1 cut(s) 1376
Bse1I ACTGG 4 cut(s) 425, 698, 854, 1219
Bse3DI GCAATG 1 cut(s) 582
Bse8I GATNNNNATC 2 cut(s) 132, 606
BseBI CCWGG 1 cut(s) 962
BseCI ATCGAT 1 cut(s) 711
BseDI CCNNGG 1 cut(s) 93
BseGI GGATG 2 cut(s) 413, 556
BseJI GATNNNNATC 2 cut(s) 132, 606
BseLI CCNNNNNNNGG 1 cut(s) 20
BseMI GCAATG 1 cut(s) 582
BseMII CTCAG 6 cut(s) 198, 537, 609, 1170, 1335, 1371
BseNI ACTGG 4 cut(s) 425, 698, 854, 1219
BseRI GAGGAG 4 cut(s) 780, 783, 786, 789
BseSI GKGCMC 1 cut(s) 1194
BseXI GCAGC 3 cut(s) 316, 319, 353
BsgI GTGCAG 1 cut(s) 1016
BshFI GGCC 1 cut(s) 1218
BshNI GGYRCC 1 cut(s) 652
BshTI ACCGGT 1 cut(s) 1376
BshVI ATCGAT 1 cut(s) 711
BsiHKAI GWGCWC 1 cut(s) 1194
BsiHKCI CYCGRG 2 cut(s) 884, 1327
BsiSI CCGG 1 cut(s) 1377
BslFI GGGAC 2 cut(s) 866, 932
BslI CCNNNNNNNGG 1 cut(s) 20
BsmAI GTCTC 1 cut(s) 792
BsmFI GGGAC 2 cut(s) 866, 932
BsnI GGCC 1 cut(s) 1218
BsoBI CYCGRG 2 cut(s) 884, 1327
Bsp119I TTCGAA 2 cut(s) 35, 107
Bsp1286I GDGCHC 1 cut(s) 1194
Bsp143I GATC 4 cut(s) 83, 231, 1069, 1289
Bsp1720I GCTNAGC 1 cut(s) 207
BspACI CCGC 3 cut(s) 193, 768, 940
BspANI GGCC 1 cut(s) 1218
BspCNI CTCAG 6 cut(s) 199, 538, 610, 1169, 1334, 1370
BspDI ATCGAT 1 cut(s) 711
BspLI GGNNCC 2 cut(s) 477, 654
BspMAI CTGCAG 1 cut(s) 868
BspMI ACCTGC 1 cut(s) 871
BspPI GGATC 2 cut(s) 78, 1297
BspQI GCTCTTC 1 cut(s) 356
BspT104I TTCGAA 2 cut(s) 35, 107
BspT107I GGYRCC 1 cut(s) 652
BspTI CTTAAG 1 cut(s) 1123
BsrBI CCGCTC 1 cut(s) 770
BsrDI GCAATG 1 cut(s) 582
BsrFI RCCGGY 1 cut(s) 1376
BsrI ACTGG 4 cut(s) 425, 698, 854, 1219
BssAI RCCGGY 1 cut(s) 1376
BssECI CCNNGG 1 cut(s) 93
BssMI GATC 4 cut(s) 83, 231, 1069, 1289
BssNI GRCGYC 2 cut(s) 5, 905
Bst2UI CCWGG 1 cut(s) 962
Bst4CI ACNGT 8 cut(s) 97, 302, 349, 496, 762, 1264, 1307, 1349
Bst6I CTCTTC 4 cut(s) 356, 636, 894, 1004
BstACI GRCGYC 2 cut(s) 5, 905
BstAFI CTTAAG 1 cut(s) 1123
BstBI TTCGAA 2 cut(s) 35, 107
BstDEI CTNAG 7 cut(s) 207, 546, 618, 947, 1156, 1321, 1357
BstDSI CCRYGG 1 cut(s) 93
BstF5I GGATG 2 cut(s) 413, 556
BstKTI GATC 4 cut(s) 86, 234, 1072, 1292
BstMAI GTCTC 1 cut(s) 792
BstMBI GATC 4 cut(s) 83, 231, 1069, 1289
BstMWI GCNNNNNNNGC 1 cut(s) 72
BstNI CCWGG 1 cut(s) 962
BstSCI CCNGG 1 cut(s) 960
BstSFI CTRYAG 2 cut(s) 15, 864
BstSLI GKGCMC 1 cut(s) 1194
BstV1I GCAGC 3 cut(s) 316, 319, 353
BstV2I GAAGAC 3 cut(s) 44, 506, 960
Bsu15I ATCGAT 1 cut(s) 711
BsuRI GGCC 1 cut(s) 1218
BsuTUI ATCGAT 1 cut(s) 711
BtgI CCRYGG 1 cut(s) 93
BtsCI GGATG 2 cut(s) 413, 556
BtsIMutI CAGTG 3 cut(s) 501, 861, 1354
BveI ACCTGC 1 cut(s) 871
Cfr10I RCCGGY 1 cut(s) 1376
Cfr13I GGNCC 1 cut(s) 11
ClaI ATCGAT 1 cut(s) 711
CseI GACGC 1 cut(s) 894
Csp6I GTAC 2 cut(s) 320, 345
CspAI ACCGGT 1 cut(s) 1376
CviAII CATG 6 cut(s) 323, 452, 599, 719, 1250, 1364
CviQI GTAC 2 cut(s) 320, 345
DdeI CTNAG 7 cut(s) 207, 546, 618, 947, 1156, 1321, 1357
DpnI GATC 4 cut(s) 85, 233, 1071, 1291
DpnII GATC 4 cut(s) 83, 231, 1069, 1289
Eam1104I CTCTTC 4 cut(s) 356, 636, 894, 1004
EarI CTCTTC 4 cut(s) 356, 636, 894, 1004
Eco32I GATATC 1 cut(s) 709
Eco47I GGWCC 1 cut(s) 11
Eco88I CYCGRG 2 cut(s) 884, 1327
EcoRI GAATTC 2 cut(s) 103, 109
EcoRII CCWGG 1 cut(s) 960
EcoRV GATATC 1 cut(s) 709
FaeI CATG 6 cut(s) 326, 455, 602, 722, 1253, 1367
FalI AAGNNNNNCTT 4 cut(s) 195, 227, 1106, 1138
FaqI GGGAC 2 cut(s) 866, 932
FatI CATG 6 cut(s) 322, 451, 598, 718, 1249, 1363
FauI CCCGC 1 cut(s) 775
FauNDI CATATG 1 cut(s) 612
FbaI TGATCA 1 cut(s) 231
Fnu4HI GCNGC 4 cut(s) 330, 333, 367, 941
FokI GGATG 2 cut(s) 420, 563
Fsp4HI GCNGC 4 cut(s) 330, 333, 367, 941
FspBI CTAG 5 cut(s) 504, 983, 1208, 1311, 1335
GluI GCNGC 4 cut(s) 330, 333, 367, 941
GsuI CTGGAG 3 cut(s) 408, 944, 1002
HaeIII GGCC 1 cut(s) 1218
HapII CCGG 1 cut(s) 1377
HgaI GACGC 1 cut(s) 894
Hin1I GRCGYC 2 cut(s) 5, 905
Hin1II CATG 6 cut(s) 326, 455, 602, 722, 1253, 1367
HindIII AAGCTT 2 cut(s) 170, 890
HinfI GANTC 8 cut(s) 631, 839, 1098, 1154, 1172, 1196, 1223, 1367
HpaII CCGG 1 cut(s) 1377
HphI GGTGA 1 cut(s) 522
Hpy166II GTNNAC 2 cut(s) 449, 1192
Hpy188I TCNGA 7 cut(s) 138, 354, 557, 1097, 1159, 1345, 1372
Hpy188III TCNNGA 7 cut(s) 405, 659, 1019, 1067, 1073, 1102, 1359
Hpy8I GTNNAC 2 cut(s) 449, 1192
HpyAV CCTTC 1 cut(s) 789
HpyCH4III ACNGT 8 cut(s) 97, 302, 349, 496, 762, 1264, 1307, 1349
HpyCH4IV ACGT 1 cut(s) 926
HpyCH4V TGCA 6 cut(s) 369, 575, 866, 911, 997, 1192
HpyF10VI GCNNNNNNNGC 1 cut(s) 72
HpyF3I CTNAG 7 cut(s) 207, 546, 618, 947, 1156, 1321, 1357
HpySE526I ACGT 1 cut(s) 926
Hsp92I GRCGYC 2 cut(s) 5, 905
Hsp92II CATG 6 cut(s) 326, 455, 602, 722, 1253, 1367
Ksp22I TGATCA 1 cut(s) 231
Kzo9I GATC 4 cut(s) 83, 231, 1069, 1289
LguI GCTCTTC 1 cut(s) 356
LmnI GCTCC 7 cut(s) 225, 271, 326, 475, 727, 775, 1087
Lsp1109I GCAGC 3 cut(s) 316, 319, 353
LweI GCATC 2 cut(s) 1156, 1265
MaeI CTAG 5 cut(s) 504, 983, 1208, 1311, 1335
MaeII ACGT 1 cut(s) 926
MaeIII GTNAC 9 cut(s) 254, 436, 528, 675, 756, 762, 1102, 1210, 1234
MalI GATC 4 cut(s) 85, 233, 1071, 1291
MbiI CCGCTC 1 cut(s) 770
MboI GATC 4 cut(s) 83, 231, 1069, 1289
MboII GAAGA 9 cut(s) 49, 137, 157, 373, 511, 653, 911, 965, 1021
MhlI GDGCHC 1 cut(s) 1194
MluCI AATT 6 cut(s) 103, 109, 162, 373, 1241, 1381
MlyI GAGTC 1 cut(s) 1148
MmeI TCCRAC 2 cut(s) 102, 1264
MroXI GAANNNNTTC 1 cut(s) 1176
MseI TTAA 6 cut(s) 155, 389, 471, 567, 1124, 1384
MslI CAYNNNNRTG 1 cut(s) 1185
MspCI CTTAAG 1 cut(s) 1123
MspI CCGG 1 cut(s) 1377
MspR9I CCNGG 1 cut(s) 962
MvaI CCWGG 1 cut(s) 962
MwoI GCNNNNNNNGC 1 cut(s) 72
NdeI CATATG 1 cut(s) 612
NdeII GATC 4 cut(s) 83, 231, 1069, 1289
NlaIII CATG 6 cut(s) 326, 455, 602, 722, 1253, 1367
NlaIV GGNNCC 2 cut(s) 477, 654
NmuCI GTSAC 2 cut(s) 528, 1102
NspV TTCGAA 2 cut(s) 35, 107
OliI CACNNNNGTG 1 cut(s) 1185
PciSI GCTCTTC 1 cut(s) 356
PdmI GAANNNNTTC 1 cut(s) 1176
PfeI GAWTC 7 cut(s) 631, 839, 1098, 1172, 1196, 1223, 1367
PfoI TCCNGGA 1 cut(s) 960
PinAI ACCGGT 1 cut(s) 1376
PkrI GCNGC 4 cut(s) 331, 334, 368, 942
PleI GAGTC 1 cut(s) 1148
PpsI GAGTC 1 cut(s) 1148
PsiI TTATAA 1 cut(s) 1004
Psp6I CCWGG 1 cut(s) 960
PspGI CCWGG 1 cut(s) 960
PspN4I GGNNCC 2 cut(s) 477, 654
PspPI GGNCC 1 cut(s) 11
PstI CTGCAG 1 cut(s) 868
RsaI GTAC 2 cut(s) 321, 346
RsaNI GTAC 2 cut(s) 320, 345
RseI CAYNNNNRTG 1 cut(s) 1185
SapI GCTCTTC 1 cut(s) 356
SaqAI TTAA 6 cut(s) 155, 389, 471, 567, 1124, 1384
SatI GCNGC 4 cut(s) 330, 333, 367, 941
Sau3AI GATC 4 cut(s) 83, 231, 1069, 1289
Sau96I GGNCC 1 cut(s) 11
SchI GAGTC 1 cut(s) 1148
ScrFI CCNGG 1 cut(s) 962
SduI GDGCHC 1 cut(s) 1194
SfaNI GCATC 2 cut(s) 1156, 1265
SfcI CTRYAG 2 cut(s) 15, 864
SfuI TTCGAA 2 cut(s) 35, 107
SinI GGWCC 1 cut(s) 11
SmiMI CAYNNNNRTG 1 cut(s) 1185
SmlI CTYRAG 2 cut(s) 212, 1123
SmoI CTYRAG 2 cut(s) 212, 1123
Sse9I AATT 6 cut(s) 103, 109, 162, 373, 1241, 1381
SsiI CCGC 3 cut(s) 193, 768, 940
SspI AATATT 1 cut(s) 466
SspMI CTAG 5 cut(s) 504, 983, 1208, 1311, 1335
StyD4I CCNGG 1 cut(s) 960
TaaI ACNGT 8 cut(s) 97, 302, 349, 496, 762, 1264, 1307, 1349
TaiI ACGT 1 cut(s) 929
TaqI TCGA 7 cut(s) 35, 107, 243, 711, 731, 1199, 1267
TasI AATT 6 cut(s) 103, 109, 162, 373, 1241, 1381
TatI WGTACW 1 cut(s) 319
TauI GCSGC 1 cut(s) 943
TfiI GAWTC 7 cut(s) 631, 839, 1098, 1172, 1196, 1223, 1367
Tru1I TTAA 6 cut(s) 155, 389, 471, 567, 1124, 1384
Tru9I TTAA 6 cut(s) 155, 389, 471, 567, 1124, 1384
TscAI CASTG 3 cut(s) 501, 861, 1354
TseFI GTSAC 2 cut(s) 528, 1102
TseI GCWGC 3 cut(s) 329, 332, 366
Tsp45I GTSAC 2 cut(s) 528, 1102
TspDTI ATGAA 3 cut(s) 158, 407, 1380
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 3 cut(s) 501, 861, 1354
Vha464I CTTAAG 1 cut(s) 1123
VneI GTGCAC 1 cut(s) 1190
VpaK11BI GGWCC 1 cut(s) 11
XapI RAATTY 2 cut(s) 103, 109
XcmI CCANNNNNNNNNTGG 1 cut(s) 94
XmnI GAANNNNTTC 1 cut(s) 1176
XspI CTAG 5 cut(s) 504, 983, 1208, 1311, 1335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.