transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17790 AT1G73150 AT1G73150 |
| fragaria_vesca | FvH4_3g18680 FvH4_3g18680 FvH4_3g18680 |
| malus_domestica | MD03G1240000.v1.1 MD11G1259300.v1.1 |
| prunus_persica | Prupe.4G170600_v2.0.a1 Prupe.4G170600_v2.0.a1 Prupe.4G170600_v2.0.a1 |
| pyrus_communis | pycom03g18520 pycom11g22910 |
| rosa_chinensis | RchiOBHm_Chr5g0031501 |
| rosa_laevigata | RLG00000033316 |
| rosa_multiflora | Rmu_co8128242.1_g000001 Rmu_sc0006344.1_g000009 Rmu_sc0009888.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00048820 |
| rosa_rugosa | Rorug05G0126400 Rorug05G0126500 Rorug05G0126500 Rorug05G0126600 Rorug05G0126700 |
| rosa_samantha | Rh5AG219300 Rh5BG218700 Rh5CG242300 Rh5DG224200 |
| rosa_wichuraiana | Rw5G020000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1515 |
| Acc36I | ACCTGC | 1 cut(s) | 1258 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 20 |
| AciI | CCGC | 6 cut(s) | 82, 103, 431, 461, 872, 1181 |
| AclWI | GGATC | 7 cut(s) | 927, 1229, 1466, 1714, 1728, 1741, 1786 |
| AcsI | RAATTY | 2 cut(s) | 523, 598 |
| AcuI | CTGAAG | 3 cut(s) | 357, 1014, 1346 |
| AcvI | CACGTG | 1 cut(s) | 191 |
| AcyI | GRCGYC | 1 cut(s) | 140 |
| AfaI | GTAC | 2 cut(s) | 427, 628 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 20, 91, 162, 182, 410, 542, 545 |
| AjnI | CCWGG | 2 cut(s) | 1084, 1267 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1048, 1080, 1443, 1475 |
| Alw26I | GTCTC | 2 cut(s) | 18, 805 |
| AlwI | GGATC | 7 cut(s) | 927, 1229, 1466, 1714, 1728, 1741, 1786 |
| Ama87I | CYCGRG | 2 cut(s) | 175, 1302 |
| AoxI | GGCC | 5 cut(s) | 10, 185, 700, 873, 1632 |
| ApeKI | GCWGC | 4 cut(s) | 97, 100, 118, 788 |
| ApoI | RAATTY | 2 cut(s) | 523, 598 |
| AseI | ATTAAT | 2 cut(s) | 1017, 1098 |
| AspLEI | GCGC | 1 cut(s) | 297 |
| AspS9I | GGNCC | 4 cut(s) | 11, 185, 874, 1306 |
| AsuC2I | CCSGG | 3 cut(s) | 52, 176, 177 |
| AsuHPI | GGTGA | 6 cut(s) | 229, 287, 313, 464, 763, 1703 |
| AvaI | CYCGRG | 2 cut(s) | 175, 1302 |
| AvaII | GGWCC | 1 cut(s) | 1306 |
| BamHI | GGATCC | 1 cut(s) | 1733 |
| BanII | GRGCYC | 2 cut(s) | 168, 1084 |
| BbrPI | CACGTG | 1 cut(s) | 191 |
| BbsI | GAAGAC | 1 cut(s) | 500 |
| BbvI | GCAGC | 4 cut(s) | 109, 112, 130, 775 |
| BccI | CCATC | 3 cut(s) | 265, 730, 862 |
| BceAI | ACGGC | 4 cut(s) | 153, 444, 676, 801 |
| BciT130I | CCWGG | 2 cut(s) | 1086, 1269 |
| BcnI | CCSGG | 3 cut(s) | 52, 176, 177 |
| BcoDI | GTCTC | 2 cut(s) | 18, 805 |
| BfaI | CTAG | 2 cut(s) | 519, 1385 |
| BfmI | CTRYAG | 2 cut(s) | 912, 1614 |
| BfoI | RGCGCY | 1 cut(s) | 298 |
| BfuAI | ACCTGC | 1 cut(s) | 1258 |
| BisI | GCNGC | 6 cut(s) | 98, 101, 104, 119, 789, 873 |
| BlpI | GCTNAGC | 1 cut(s) | 1349 |
| BlsI | GCNGC | 6 cut(s) | 99, 102, 105, 120, 790, 874 |
| BmcAI | AGTACT | 1 cut(s) | 628 |
| Bme1390I | CCNGG | 5 cut(s) | 52, 176, 177, 1086, 1269 |
| Bme18I | GGWCC | 1 cut(s) | 1306 |
| BmeT110I | CYCGRG | 2 cut(s) | 175, 1302 |
| BmgT120I | GGNCC | 4 cut(s) | 11, 185, 874, 1306 |
| BmiI | GGNNCC | 6 cut(s) | 1083, 1164, 1284, 1307, 1308, 1735 |
| BmrFI | CCNGG | 5 cut(s) | 52, 176, 177, 1086, 1269 |
| BmrI | ACTGGG | 1 cut(s) | 1664 |
| BmsI | GCATC | 4 cut(s) | 105, 676, 739, 1670 |
| BmuI | ACTGGG | 1 cut(s) | 1664 |
| BpiI | GAAGAC | 1 cut(s) | 500 |
| BpmI | CTGGAG | 1 cut(s) | 1068 |
| Bpu10I | CCTNAGC | 2 cut(s) | 318, 690 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1349 |
| BpuEI | CTTGAG | 2 cut(s) | 302, 656 |
| BpuMI | CCSGG | 3 cut(s) | 52, 176, 177 |
| BsaAI | YACGTR | 1 cut(s) | 191 |
| BsaHI | GRCGYC | 1 cut(s) | 140 |
| BsaJI | CCNNGG | 2 cut(s) | 127, 175 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 314, 344 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 20, 91, 162, 182, 410, 542, 545 |
| Bse118I | RCCGGY | 2 cut(s) | 679, 1279 |
| Bse1I | ACTGG | 2 cut(s) | 1497, 1670 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseBI | CCWGG | 2 cut(s) | 1086, 1269 |
| BseDI | CCNNGG | 2 cut(s) | 127, 175 |
| BseGI | GGATG | 5 cut(s) | 78, 730, 811, 862, 1264 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 20, 91, 162, 182, 410, 542, 545 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseMII | CTCAG | 6 cut(s) | 341, 368, 783, 1019, 1363, 1368 |
| BseNI | ACTGG | 2 cut(s) | 1497, 1670 |
| BseRI | GAGGAG | 6 cut(s) | 142, 479, 1155, 1158, 1167, 1548 |
| BseXI | GCAGC | 4 cut(s) | 109, 112, 130, 775 |
| BseYI | CCCAGC | 1 cut(s) | 663 |
| BshFI | GGCC | 5 cut(s) | 12, 187, 702, 875, 1634 |
| BsiHKCI | CYCGRG | 2 cut(s) | 175, 1302 |
| BsiSI | CCGG | 4 cut(s) | 52, 176, 680, 1280 |
| BslFI | GGGAC | 4 cut(s) | 224, 760, 1319, 1651 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 20, 91, 162, 182, 410, 542, 545 |
| BsmAI | GTCTC | 2 cut(s) | 18, 805 |
| BsmBI | CGTCTC | 1 cut(s) | 18 |
| BsmFI | GGGAC | 4 cut(s) | 224, 760, 1319, 1651 |
| BsnI | GGCC | 5 cut(s) | 12, 187, 702, 875, 1634 |
| BsoBI | CYCGRG | 2 cut(s) | 175, 1302 |
| Bsp1286I | GDGCHC | 2 cut(s) | 168, 1084 |
| Bsp143I | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1349 |
| BspACI | CCGC | 6 cut(s) | 82, 103, 431, 461, 872, 1181 |
| BspANI | GGCC | 5 cut(s) | 12, 187, 702, 875, 1634 |
| BspCNI | CTCAG | 6 cut(s) | 340, 367, 784, 1018, 1362, 1369 |
| BspLI | GGNNCC | 6 cut(s) | 1083, 1164, 1284, 1307, 1308, 1735 |
| BspMAI | CTGCAG | 1 cut(s) | 1618 |
| BspMI | ACCTGC | 1 cut(s) | 1258 |
| BspPI | GGATC | 7 cut(s) | 927, 1229, 1466, 1714, 1728, 1741, 1786 |
| BspQI | GCTCTTC | 1 cut(s) | 1677 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BsrFI | RCCGGY | 2 cut(s) | 679, 1279 |
| BsrI | ACTGG | 2 cut(s) | 1497, 1670 |
| BssAI | RCCGGY | 2 cut(s) | 679, 1279 |
| BssECI | CCNNGG | 2 cut(s) | 127, 175 |
| BssMI | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| BssNI | GRCGYC | 1 cut(s) | 140 |
| Bst2UI | CCWGG | 2 cut(s) | 1086, 1269 |
| Bst4CI | ACNGT | 1 cut(s) | 751 |
| Bst6I | CTCTTC | 6 cut(s) | 557, 611, 749, 891, 1677, 1744 |
| BstACI | GRCGYC | 1 cut(s) | 140 |
| BstBAI | YACGTR | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 4 cut(s) | 34, 168, 704, 1230 |
| BstDEI | CTNAG | 8 cut(s) | 318, 327, 354, 690, 792, 1005, 1349, 1377 |
| BstF5I | GGATG | 5 cut(s) | 78, 730, 811, 862, 1264 |
| BstH2I | RGCGCY | 1 cut(s) | 298 |
| BstHHI | GCGC | 1 cut(s) | 297 |
| BstKTI | GATC | 7 cut(s) | 511, 922, 1237, 1474, 1709, 1736, 1781 |
| BstMAI | GTCTC | 2 cut(s) | 18, 805 |
| BstMBI | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 103, 292, 323, 332, 703, 797, 1339, 1553 |
| BstNI | CCWGG | 2 cut(s) | 1086, 1269 |
| BstSCI | CCNGG | 5 cut(s) | 50, 174, 175, 1084, 1267 |
| BstSFI | CTRYAG | 2 cut(s) | 912, 1614 |
| BstV1I | GCAGC | 4 cut(s) | 109, 112, 130, 775 |
| BstV2I | GAAGAC | 1 cut(s) | 500 |
| BstX2I | RGATCY | 1 cut(s) | 1733 |
| BstYI | RGATCY | 1 cut(s) | 1733 |
| BsuRI | GGCC | 5 cut(s) | 12, 187, 702, 875, 1634 |
| BtsCI | GGATG | 5 cut(s) | 78, 730, 811, 862, 1264 |
| BtsI | GCAGTG | 3 cut(s) | 1471, 1611, 1729 |
| BtsIMutI | CAGTG | 3 cut(s) | 1471, 1611, 1729 |
| BveI | ACCTGC | 1 cut(s) | 1258 |
| Cac8I | GCNNGC | 4 cut(s) | 34, 168, 704, 1230 |
| CfoI | GCGC | 1 cut(s) | 297 |
| Cfr10I | RCCGGY | 2 cut(s) | 679, 1279 |
| Cfr13I | GGNCC | 4 cut(s) | 11, 185, 874, 1306 |
| Cfr9I | CCCGGG | 1 cut(s) | 175 |
| CseI | GACGC | 1 cut(s) | 129 |
| Csp6I | GTAC | 2 cut(s) | 426, 627 |
| CviAII | CATG | 6 cut(s) | 74, 707, 832, 863, 1592, 1628 |
| CviQI | GTAC | 2 cut(s) | 426, 627 |
| DdeI | CTNAG | 8 cut(s) | 318, 327, 354, 690, 792, 1005, 1349, 1377 |
| DpnI | GATC | 7 cut(s) | 510, 921, 1236, 1473, 1708, 1735, 1780 |
| DpnII | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| Eam1104I | CTCTTC | 6 cut(s) | 557, 611, 749, 891, 1677, 1744 |
| EarI | CTCTTC | 6 cut(s) | 557, 611, 749, 891, 1677, 1744 |
| EciI | GGCGGA | 3 cut(s) | 71, 446, 1170 |
| Eco24I | GRGCYC | 2 cut(s) | 168, 1084 |
| Eco47I | GGWCC | 1 cut(s) | 1306 |
| Eco57I | CTGAAG | 3 cut(s) | 357, 1014, 1346 |
| Eco72I | CACGTG | 1 cut(s) | 191 |
| Eco88I | CYCGRG | 2 cut(s) | 175, 1302 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1306 |
| EcoRI | GAATTC | 2 cut(s) | 523, 598 |
| EcoRII | CCWGG | 2 cut(s) | 1084, 1267 |
| EcoT22I | ATGCAT | 2 cut(s) | 1593, 1663 |
| EcoT38I | GRGCYC | 2 cut(s) | 168, 1084 |
| Esp3I | CGTCTC | 1 cut(s) | 18 |
| FaeI | CATG | 6 cut(s) | 77, 710, 835, 866, 1595, 1631 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1536, 1568 |
| FaqI | GGGAC | 4 cut(s) | 224, 760, 1319, 1651 |
| FatI | CATG | 6 cut(s) | 73, 706, 831, 862, 1591, 1627 |
| Fnu4HI | GCNGC | 6 cut(s) | 98, 101, 104, 119, 789, 873 |
| FokI | GGATG | 5 cut(s) | 65, 717, 818, 869, 1251 |
| FriOI | GRGCYC | 2 cut(s) | 168, 1084 |
| Fsp4HI | GCNGC | 6 cut(s) | 98, 101, 104, 119, 789, 873 |
| FspBI | CTAG | 2 cut(s) | 519, 1385 |
| GlaI | GCGC | 1 cut(s) | 296 |
| GluI | GCNGC | 6 cut(s) | 98, 101, 104, 119, 789, 873 |
| GsaI | CCCAGC | 1 cut(s) | 667 |
| GsuI | CTGGAG | 1 cut(s) | 1068 |
| HaeII | RGCGCY | 1 cut(s) | 298 |
| HaeIII | GGCC | 5 cut(s) | 12, 187, 702, 875, 1634 |
| HapII | CCGG | 4 cut(s) | 52, 176, 680, 1280 |
| HgaI | GACGC | 1 cut(s) | 129 |
| HhaI | GCGC | 1 cut(s) | 297 |
| Hin1I | GRCGYC | 1 cut(s) | 140 |
| Hin1II | CATG | 6 cut(s) | 77, 710, 835, 866, 1595, 1631 |
| Hin6I | GCGC | 1 cut(s) | 295 |
| HinP1I | GCGC | 1 cut(s) | 295 |
| HincII | GTYRAC | 1 cut(s) | 148 |
| HindII | GTYRAC | 1 cut(s) | 148 |
| HpaII | CCGG | 4 cut(s) | 52, 176, 680, 1280 |
| HphI | GGTGA | 6 cut(s) | 229, 287, 313, 464, 763, 1703 |
| Hpy166II | GTNNAC | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 9 cut(s) | 311, 984, 1068, 1202, 1304, 1399, 1475, 1731, 1770 |
| Hpy8I | GTNNAC | 1 cut(s) | 148 |
| Hpy99I | CGWCG | 2 cut(s) | 94, 145 |
| HpyAV | CCTTC | 7 cut(s) | 332, 463, 496, 549, 1182, 1370, 1383 |
| HpyCH4III | ACNGT | 1 cut(s) | 751 |
| HpyCH4IV | ACGT | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 8 cut(s) | 118, 706, 800, 1253, 1333, 1591, 1616, 1661 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 103, 292, 323, 332, 703, 797, 1339, 1553 |
| HpyF3I | CTNAG | 8 cut(s) | 318, 327, 354, 690, 792, 1005, 1349, 1377 |
| HpySE526I | ACGT | 1 cut(s) | 190 |
| Hsp92I | GRCGYC | 1 cut(s) | 140 |
| Hsp92II | CATG | 6 cut(s) | 77, 710, 835, 866, 1595, 1631 |
| HspAI | GCGC | 1 cut(s) | 295 |
| KflI | GGGWCCC | 1 cut(s) | 1306 |
| Kzo9I | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| LguI | GCTCTTC | 1 cut(s) | 1677 |
| LmnI | GCTCC | 5 cut(s) | 94, 1003, 1087, 1168, 1561 |
| Lsp1109I | GCAGC | 4 cut(s) | 109, 112, 130, 775 |
| LweI | GCATC | 4 cut(s) | 105, 676, 739, 1670 |
| MaeI | CTAG | 2 cut(s) | 519, 1385 |
| MaeII | ACGT | 1 cut(s) | 190 |
| MaeIII | GTNAC | 3 cut(s) | 531, 548, 1504 |
| MalI | GATC | 7 cut(s) | 510, 921, 1236, 1473, 1708, 1735, 1780 |
| MboI | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| MflI | RGATCY | 1 cut(s) | 1733 |
| MhlI | GDGCHC | 2 cut(s) | 168, 1084 |
| MlyI | GAGTC | 3 cut(s) | 143, 490, 1192 |
| MmeI | TCCRAC | 3 cut(s) | 72, 180, 570 |
| Mph1103I | ATGCAT | 2 cut(s) | 1593, 1663 |
| MseI | TTAA | 8 cut(s) | 249, 416, 672, 726, 933, 1017, 1098, 1407 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1596 |
| MspA1I | CMGCKG | 1 cut(s) | 103 |
| MspI | CCGG | 4 cut(s) | 52, 176, 680, 1280 |
| MspR9I | CCNGG | 5 cut(s) | 52, 176, 177, 1086, 1269 |
| MvaI | CCWGG | 2 cut(s) | 1086, 1269 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 103, 292, 323, 332, 703, 797, 1339, 1553 |
| NciI | CCSGG | 3 cut(s) | 52, 176, 177 |
| NdeII | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| NlaIII | CATG | 6 cut(s) | 77, 710, 835, 866, 1595, 1631 |
| NlaIV | GGNNCC | 6 cut(s) | 1083, 1164, 1284, 1307, 1308, 1735 |
| NmuCI | GTSAC | 1 cut(s) | 1504 |
| NsiI | ATGCAT | 2 cut(s) | 1593, 1663 |
| PciSI | GCTCTTC | 1 cut(s) | 1677 |
| PfeI | GAWTC | 9 cut(s) | 42, 64, 255, 307, 959, 1214, 1574, 1727, 1748 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 20 |
| PfoI | TCCNGGA | 2 cut(s) | 50, 1084 |
| PkrI | GCNGC | 6 cut(s) | 99, 102, 105, 120, 790, 874 |
| PleI | GAGTC | 3 cut(s) | 143, 490, 1192 |
| PmaCI | CACGTG | 1 cut(s) | 191 |
| PmlI | CACGTG | 1 cut(s) | 191 |
| PpsI | GAGTC | 3 cut(s) | 143, 490, 1192 |
| Ppu21I | YACGTR | 1 cut(s) | 191 |
| PpuMI | RGGWCCY | 1 cut(s) | 1306 |
| PshBI | ATTAAT | 2 cut(s) | 1017, 1098 |
| PsiI | TTATAA | 1 cut(s) | 1515 |
| Psp5II | RGGWCCY | 1 cut(s) | 1306 |
| Psp6I | CCWGG | 2 cut(s) | 1084, 1267 |
| PspCI | CACGTG | 1 cut(s) | 191 |
| PspFI | CCCAGC | 1 cut(s) | 663 |
| PspGI | CCWGG | 2 cut(s) | 1084, 1267 |
| PspN4I | GGNNCC | 6 cut(s) | 1083, 1164, 1284, 1307, 1308, 1735 |
| PspPI | GGNCC | 4 cut(s) | 11, 185, 874, 1306 |
| PspPPI | RGGWCCY | 1 cut(s) | 1306 |
| PstI | CTGCAG | 1 cut(s) | 1618 |
| PsuI | RGATCY | 1 cut(s) | 1733 |
| RsaI | GTAC | 2 cut(s) | 427, 628 |
| RsaNI | GTAC | 2 cut(s) | 426, 627 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1596 |
| SapI | GCTCTTC | 1 cut(s) | 1677 |
| SaqAI | TTAA | 8 cut(s) | 249, 416, 672, 726, 933, 1017, 1098, 1407 |
| SatI | GCNGC | 6 cut(s) | 98, 101, 104, 119, 789, 873 |
| Sau3AI | GATC | 7 cut(s) | 508, 919, 1234, 1471, 1706, 1733, 1778 |
| Sau96I | GGNCC | 4 cut(s) | 11, 185, 874, 1306 |
| ScaI | AGTACT | 1 cut(s) | 628 |
| SchI | GAGTC | 3 cut(s) | 143, 490, 1192 |
| ScrFI | CCNGG | 5 cut(s) | 52, 176, 177, 1086, 1269 |
| SduI | GDGCHC | 2 cut(s) | 168, 1084 |
| SfaNI | GCATC | 4 cut(s) | 105, 676, 739, 1670 |
| SfcI | CTRYAG | 2 cut(s) | 912, 1614 |
| SinI | GGWCC | 1 cut(s) | 1306 |
| SmaI | CCCGGG | 1 cut(s) | 177 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1596 |
| SmlI | CTYRAG | 2 cut(s) | 281, 635 |
| SmoI | CTYRAG | 2 cut(s) | 281, 635 |
| SsiI | CCGC | 6 cut(s) | 82, 103, 431, 461, 872, 1181 |
| SspI | AATATT | 2 cut(s) | 1015, 1096 |
| SspMI | CTAG | 2 cut(s) | 519, 1385 |
| StyD4I | CCNGG | 5 cut(s) | 50, 174, 175, 1084, 1267 |
| TaaI | ACNGT | 1 cut(s) | 751 |
| TaiI | ACGT | 1 cut(s) | 193 |
| TaqI | TCGA | 2 cut(s) | 312, 602 |
| TatI | WGTACW | 1 cut(s) | 626 |
| TauI | GCSGC | 2 cut(s) | 106, 875 |
| TfiI | GAWTC | 9 cut(s) | 42, 64, 255, 307, 959, 1214, 1574, 1727, 1748 |
| Tru1I | TTAA | 8 cut(s) | 249, 416, 672, 726, 933, 1017, 1098, 1407 |
| Tru9I | TTAA | 8 cut(s) | 249, 416, 672, 726, 933, 1017, 1098, 1407 |
| TscAI | CASTG | 3 cut(s) | 1471, 1618, 1729 |
| TseFI | GTSAC | 1 cut(s) | 1504 |
| TseI | GCWGC | 4 cut(s) | 97, 100, 118, 788 |
| Tsp45I | GTSAC | 1 cut(s) | 1504 |
| TspDTI | ATGAA | 3 cut(s) | 662, 851, 1340 |
| TspMI | CCCGGG | 1 cut(s) | 175 |
| TspRI | CASTG | 3 cut(s) | 1471, 1618, 1729 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 20 |
| VpaK11BI | GGWCC | 1 cut(s) | 1306 |
| VspI | ATTAAT | 2 cut(s) | 1017, 1098 |
| XapI | RAATTY | 2 cut(s) | 523, 598 |
| XmaI | CCCGGG | 1 cut(s) | 175 |
| XspI | CTAG | 2 cut(s) | 519, 1385 |
| ZrmI | AGTACT | 1 cut(s) | 628 |
| Zsp2I | ATGCAT | 2 cut(s) | 1593, 1663 |