Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0005416

Physical Location & Seq

Genomic Coordinates Reverse (-)

25216731 .. 25222221

Gene Structure 5491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG218700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGTTTCAGGCCCACTTGTTGGAGACGAAGCCAGCAACAGATTCTATTCCCGGAACACCCAGAATCCCAACCATGTCATCCGCCACTCGTCGGAGCAGCAGCGGCAGAGCTTGATGCAGCAGTTCCGAGGCGAAACGGCGTCGGTTGACTCCTCCAACAATGGGCTCGCCGAGCCGGGCAATGGGCCACGTGGGTATTCAAAGGTTGGGGACAAGGTGAGGATTTGCTTGAACTCCAAGGCTGACATTAAGGGAATCAAGTGGAAGCTGATGGGTGAGCTTGAGCAAGTGAGGCGCTTGGTGAGGAATCTCGAAGCTAAGGAGGCTCAGTTTGCTGAAGGGTATGGTGTTTCTCAGCTTTCAGATACTAATTTGGTAGATAATAATGTTAGAACTACAATGCCATTTAGGGGTTTAAGTGTTTGTACGGCGGAGAATGAGAATAAGGGTGGTGAGTTTGCGGAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGACTCCGAAGGGAGATCAGAGTTCTAGGAATTCAAAGCTACCTCCTTCTGGGGGTAACAAGAATAGGAAGAGTGAAGTTGGGCTGTTGTTGGGGTCGGATAAGAATTCGAGTAAATTGTTGAAGAGTTGTAGTACTTTGCTTGAGAAATTGATGAAGCATAAGCACGGCTGGGTGTTTAATAAGCCGGTAGATGCTAAGGGGCTTGGCCTGCATGATTACTATAAGATTGTTAAGCATCCGATGGATTTGGGGACGGTGAAGAGTAGGCTGGACAAGAATTGGTATAAGACGGCTGCTGAGTTTGCAGAGGATGTGAGACTTACATTCAATAATGCCATGTTGTATAACCCGAAAGAGCAGGATGTTCATGTGATGGCGGCCCTATTGTTGAAGTTGTTTGAAGAGAAATGGGTGGCTATAGAGGATCAGTATAAACTTAATAGGGGAGTTGAAATGGGTAGTGATTCAGAATTGCCGACCCCTGTTTCAAGAAATGCTGAAGCTCCTGCTCCGAATAATATTAATAGGAGGGTTGAAATAGGTAATAATTCAGAATTGCCAACCCCTATTTCAAGAAAGGTTCGGGCTCCAGGACATAATATTAATAGGAGAATTGGAATGGGTAATAATTCAGAATTGCCTACCCCTATAACAAGAAAGGTTCAGGCTCCTCCTCCTTCTCCTCCGCCATTGGAGATGAGGACTCTGGATAGAGCAGAATCTATGACAAAGCCTGCTGATCCCAAGTTGAAACCTGCAAGTGTTGGTCATCCAGGTAGAAAGCCGGTTCCAAAGAAACCAAAAGCTCGGGACCCTGACAAAAGGGATATGAATATGCAGGAGAAGCAGAAGCTCAGCACAGACCTTCAGGCTTTGCCTTCTGAGAAACTAGCTAATGTTGTCCAGATTGTTAAAAAGAGAAGTCAAGGGATTTTACAACAAGACGATGAGATTGAATTGGACATTGGCAGTGTTGATCCTGAAACACTTTGGGAACTGGATAGATTTGTGACTAATTATAAAAAGAGCTTGACCAAAAATAAGAGAAAAGCTGAACTTGCTCCTCAATCAGTAGAAGAATCTGACTATGCTATGCATGAGAATGTGGCACAAGCCACTGCAGAGGCACAACATGAGGCCATAGCAGTTGAATACAACGATAATGCATCTTCCCCAGTTCAAAGAGAAGAGCGAGGTGAGAATGTGAGTGGATCAAGTAGTTCCAGCAGTGATTCTGGATCCTCTTCAAGTGATTCGGAGAAAGGAAGTTCCTCTGGAAGTGGATCATATTCAAATCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

599

Amino Acids

66.4

Weight (kDa)

9.34

Isoelectric Point (pI)

46.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	209 - 293	7.6e-21	Bromodomain
BET	PF17035	443 - 504	4.6e-20	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17790 AT1G73150 AT1G73150
fragaria_vesca	FvH4_3g18680 FvH4_3g18680 FvH4_3g18680
malus_domestica	MD03G1240000.v1.1 MD11G1259300.v1.1
prunus_persica	Prupe.4G170600_v2.0.a1 Prupe.4G170600_v2.0.a1 Prupe.4G170600_v2.0.a1
pyrus_communis	pycom03g18520 pycom11g22910
rosa_chinensis	RchiOBHm_Chr5g0031501
rosa_laevigata	RLG00000033316
rosa_multiflora	Rmu_co8128242.1_g000001 Rmu_sc0006344.1_g000009 Rmu_sc0009888.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048820
rosa_rugosa	Rorug05G0126400 Rorug05G0126500 Rorug05G0126500 Rorug05G0126600 Rorug05G0126700
rosa_samantha	Rh5AG219300 Rh5BG218700 Rh5CG242300 Rh5DG224200
rosa_wichuraiana	Rw5G020000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1518
Acc36I	ACCTGC	1 cut(s)	1261
AccB7I	CCANNNNNTGG	1 cut(s)	20
AciI	CCGC	6 cut(s)	82, 103, 431, 461, 875, 1184
AclWI	GGATC	7 cut(s)	930, 1232, 1469, 1717, 1731, 1744, 1789
AcsI	RAATTY	2 cut(s)	526, 601
AcuI	CTGAAG	3 cut(s)	357, 1017, 1349
AcvI	CACGTG	1 cut(s)	191
AcyI	GRCGYC	1 cut(s)	140
AfaI	GTAC	2 cut(s)	427, 631
AfiI	CCNNNNNNNGG	7 cut(s)	20, 91, 162, 182, 410, 545, 548
AjnI	CCWGG	2 cut(s)	1087, 1270
AjuI	GAANNNNNNNTTGG	4 cut(s)	1051, 1083, 1446, 1478
Alw26I	GTCTC	2 cut(s)	18, 808
AlwI	GGATC	7 cut(s)	930, 1232, 1469, 1717, 1731, 1744, 1789
Ama87I	CYCGRG	1 cut(s)	1305
AoxI	GGCC	5 cut(s)	10, 185, 703, 876, 1635
ApeKI	GCWGC	4 cut(s)	97, 100, 118, 791
ApoI	RAATTY	2 cut(s)	526, 601
AseI	ATTAAT	2 cut(s)	1020, 1101
AspLEI	GCGC	1 cut(s)	297
AspS9I	GGNCC	4 cut(s)	11, 185, 877, 1309
AsuC2I	CCSGG	2 cut(s)	52, 177
AsuHPI	GGTGA	6 cut(s)	229, 287, 313, 464, 766, 1706
AvaI	CYCGRG	1 cut(s)	1305
AvaII	GGWCC	1 cut(s)	1309
BamHI	GGATCC	1 cut(s)	1736
BanII	GRGCYC	2 cut(s)	168, 1087
BbrPI	CACGTG	1 cut(s)	191
BbsI	GAAGAC	1 cut(s)	503
BbvI	GCAGC	4 cut(s)	109, 112, 130, 778
BccI	CCATC	3 cut(s)	265, 733, 865
BceAI	ACGGC	4 cut(s)	153, 444, 679, 804
BciT130I	CCWGG	2 cut(s)	1089, 1272
BcnI	CCSGG	2 cut(s)	52, 177
BcoDI	GTCTC	2 cut(s)	18, 808
BfaI	CTAG	2 cut(s)	522, 1388
BfmI	CTRYAG	2 cut(s)	915, 1617
BfoI	RGCGCY	1 cut(s)	298
BfuAI	ACCTGC	1 cut(s)	1261
BisI	GCNGC	6 cut(s)	98, 101, 104, 119, 792, 876
BlpI	GCTNAGC	1 cut(s)	1352
BlsI	GCNGC	6 cut(s)	99, 102, 105, 120, 793, 877
BmcAI	AGTACT	1 cut(s)	631
Bme1390I	CCNGG	4 cut(s)	52, 177, 1089, 1272
Bme18I	GGWCC	1 cut(s)	1309
BmeT110I	CYCGRG	1 cut(s)	1305
BmgT120I	GGNCC	4 cut(s)	11, 185, 877, 1309
BmiI	GGNNCC	6 cut(s)	1086, 1167, 1287, 1310, 1311, 1738
BmrFI	CCNGG	4 cut(s)	52, 177, 1089, 1272
BmrI	ACTGGG	1 cut(s)	1667
BmsI	GCATC	4 cut(s)	105, 679, 742, 1673
BmuI	ACTGGG	1 cut(s)	1667
BpiI	GAAGAC	1 cut(s)	503
BpmI	CTGGAG	1 cut(s)	1071
Bpu10I	CCTNAGC	2 cut(s)	318, 693
Bpu1102I	GCTNAGC	1 cut(s)	1352
BpuEI	CTTGAG	2 cut(s)	302, 659
BpuMI	CCSGG	2 cut(s)	52, 177
BsaAI	YACGTR	1 cut(s)	191
BsaHI	GRCGYC	1 cut(s)	140
BsaJI	CCNNGG	2 cut(s)	127, 237
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 91, 162, 182, 410, 545, 548
Bse118I	RCCGGY	2 cut(s)	682, 1282
Bse1I	ACTGG	2 cut(s)	1500, 1673
Bse3DI	GCAATG	1 cut(s)	187
BseBI	CCWGG	2 cut(s)	1089, 1272
BseDI	CCNNGG	2 cut(s)	127, 237
BseGI	GGATG	5 cut(s)	78, 733, 814, 865, 1267
BseLI	CCNNNNNNNGG	7 cut(s)	20, 91, 162, 182, 410, 545, 548
BseMI	GCAATG	1 cut(s)	187
BseMII	CTCAG	5 cut(s)	341, 368, 786, 1366, 1371
BseNI	ACTGG	2 cut(s)	1500, 1673
BseRI	GAGGAG	6 cut(s)	142, 479, 1158, 1161, 1170, 1551
BseXI	GCAGC	4 cut(s)	109, 112, 130, 778
BseYI	CCCAGC	1 cut(s)	666
BshFI	GGCC	5 cut(s)	12, 187, 705, 878, 1637
BsiHKCI	CYCGRG	1 cut(s)	1305
BsiSI	CCGG	4 cut(s)	52, 176, 683, 1283
BslFI	GGGAC	3 cut(s)	224, 763, 1322
BslI	CCNNNNNNNGG	7 cut(s)	20, 91, 162, 182, 410, 545, 548
BsmAI	GTCTC	2 cut(s)	18, 808
BsmBI	CGTCTC	1 cut(s)	18
BsmFI	GGGAC	3 cut(s)	224, 763, 1322
BsnI	GGCC	5 cut(s)	12, 187, 705, 878, 1637
BsoBI	CYCGRG	1 cut(s)	1305
Bsp1286I	GDGCHC	2 cut(s)	168, 1087
Bsp143I	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
Bsp1720I	GCTNAGC	1 cut(s)	1352
BspACI	CCGC	6 cut(s)	82, 103, 431, 461, 875, 1184
BspANI	GGCC	5 cut(s)	12, 187, 705, 878, 1637
BspCNI	CTCAG	5 cut(s)	340, 367, 787, 1365, 1372
BspLI	GGNNCC	6 cut(s)	1086, 1167, 1287, 1310, 1311, 1738
BspMAI	CTGCAG	1 cut(s)	1621
BspMI	ACCTGC	1 cut(s)	1261
BspPI	GGATC	7 cut(s)	930, 1232, 1469, 1717, 1731, 1744, 1789
BspQI	GCTCTTC	1 cut(s)	1680
BsrDI	GCAATG	1 cut(s)	187
BsrFI	RCCGGY	2 cut(s)	682, 1282
BsrI	ACTGG	2 cut(s)	1500, 1673
BssAI	RCCGGY	2 cut(s)	682, 1282
BssECI	CCNNGG	2 cut(s)	127, 237
BssMI	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
BssNI	GRCGYC	1 cut(s)	140
BssT1I	CCWWGG	1 cut(s)	237
Bst2UI	CCWGG	2 cut(s)	1089, 1272
Bst4CI	ACNGT	1 cut(s)	754
Bst6I	CTCTTC	6 cut(s)	560, 614, 752, 894, 1680, 1747
BstACI	GRCGYC	1 cut(s)	140
BstBAI	YACGTR	1 cut(s)	191
BstC8I	GCNNGC	4 cut(s)	34, 168, 707, 1233
BstDEI	CTNAG	7 cut(s)	318, 327, 354, 693, 795, 1352, 1380
BstF5I	GGATG	5 cut(s)	78, 733, 814, 865, 1267
BstH2I	RGCGCY	1 cut(s)	298
BstHHI	GCGC	1 cut(s)	297
BstKTI	GATC	7 cut(s)	514, 925, 1240, 1477, 1712, 1739, 1784
BstMAI	GTCTC	2 cut(s)	18, 808
BstMBI	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
BstMWI	GCNNNNNNNGC	9 cut(s)	103, 172, 292, 323, 332, 706, 800, 1342, 1556
BstNI	CCWGG	2 cut(s)	1089, 1272
BstSCI	CCNGG	4 cut(s)	50, 175, 1087, 1270
BstSFI	CTRYAG	2 cut(s)	915, 1617
BstV1I	GCAGC	4 cut(s)	109, 112, 130, 778
BstV2I	GAAGAC	1 cut(s)	503
BstX2I	RGATCY	1 cut(s)	1736
BstYI	RGATCY	1 cut(s)	1736
BsuRI	GGCC	5 cut(s)	12, 187, 705, 878, 1637
BtsCI	GGATG	5 cut(s)	78, 733, 814, 865, 1267
BtsI	GCAGTG	3 cut(s)	1474, 1614, 1732
BtsIMutI	CAGTG	3 cut(s)	1474, 1614, 1732
BveI	ACCTGC	1 cut(s)	1261
Cac8I	GCNNGC	4 cut(s)	34, 168, 707, 1233
CfoI	GCGC	1 cut(s)	297
Cfr10I	RCCGGY	2 cut(s)	682, 1282
Cfr13I	GGNCC	4 cut(s)	11, 185, 877, 1309
CseI	GACGC	1 cut(s)	129
Csp6I	GTAC	2 cut(s)	426, 630
CviAII	CATG	6 cut(s)	74, 710, 835, 866, 1595, 1631
CviQI	GTAC	2 cut(s)	426, 630
DdeI	CTNAG	7 cut(s)	318, 327, 354, 693, 795, 1352, 1380
DpnI	GATC	7 cut(s)	513, 924, 1239, 1476, 1711, 1738, 1783
DpnII	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
Eam1104I	CTCTTC	6 cut(s)	560, 614, 752, 894, 1680, 1747
EarI	CTCTTC	6 cut(s)	560, 614, 752, 894, 1680, 1747
EciI	GGCGGA	3 cut(s)	71, 446, 1173
Eco130I	CCWWGG	1 cut(s)	237
Eco24I	GRGCYC	2 cut(s)	168, 1087
Eco47I	GGWCC	1 cut(s)	1309
Eco57I	CTGAAG	3 cut(s)	357, 1017, 1349
Eco72I	CACGTG	1 cut(s)	191
Eco88I	CYCGRG	1 cut(s)	1305
EcoO109I	RGGNCCY	1 cut(s)	1309
EcoRI	GAATTC	2 cut(s)	526, 601
EcoRII	CCWGG	2 cut(s)	1087, 1270
EcoT14I	CCWWGG	1 cut(s)	237
EcoT22I	ATGCAT	2 cut(s)	1596, 1666
EcoT38I	GRGCYC	2 cut(s)	168, 1087
ErhI	CCWWGG	1 cut(s)	237
Esp3I	CGTCTC	1 cut(s)	18
FaeI	CATG	6 cut(s)	77, 713, 838, 869, 1598, 1634
FalI	AAGNNNNNCTT	2 cut(s)	1539, 1571
FaqI	GGGAC	3 cut(s)	224, 763, 1322
FatI	CATG	6 cut(s)	73, 709, 834, 865, 1594, 1630
Fnu4HI	GCNGC	6 cut(s)	98, 101, 104, 119, 792, 876
FokI	GGATG	5 cut(s)	65, 720, 821, 872, 1254
FriOI	GRGCYC	2 cut(s)	168, 1087
Fsp4HI	GCNGC	6 cut(s)	98, 101, 104, 119, 792, 876
FspBI	CTAG	2 cut(s)	522, 1388
GlaI	GCGC	1 cut(s)	296
GluI	GCNGC	6 cut(s)	98, 101, 104, 119, 792, 876
GsaI	CCCAGC	1 cut(s)	670
GsuI	CTGGAG	1 cut(s)	1071
HaeII	RGCGCY	1 cut(s)	298
HaeIII	GGCC	5 cut(s)	12, 187, 705, 878, 1637
HapII	CCGG	4 cut(s)	52, 176, 683, 1283
HgaI	GACGC	1 cut(s)	129
HhaI	GCGC	1 cut(s)	297
Hin1I	GRCGYC	1 cut(s)	140
Hin1II	CATG	6 cut(s)	77, 713, 838, 869, 1598, 1634
Hin6I	GCGC	1 cut(s)	295
HinP1I	GCGC	1 cut(s)	295
HincII	GTYRAC	1 cut(s)	148
HindII	GTYRAC	1 cut(s)	148
HpaII	CCGG	4 cut(s)	52, 176, 683, 1283
HphI	GGTGA	6 cut(s)	229, 287, 313, 464, 766, 1706
Hpy166II	GTNNAC	1 cut(s)	148
Hpy188III	TCNNGA	9 cut(s)	311, 987, 1071, 1205, 1307, 1402, 1478, 1734, 1773
Hpy8I	GTNNAC	1 cut(s)	148
Hpy99I	CGWCG	2 cut(s)	94, 145
HpyAV	CCTTC	7 cut(s)	332, 463, 499, 552, 1185, 1373, 1386
HpyCH4III	ACNGT	1 cut(s)	754
HpyCH4IV	ACGT	1 cut(s)	190
HpyCH4V	TGCA	8 cut(s)	118, 709, 803, 1256, 1336, 1594, 1619, 1664
HpyF10VI	GCNNNNNNNGC	9 cut(s)	103, 172, 292, 323, 332, 706, 800, 1342, 1556
HpyF3I	CTNAG	7 cut(s)	318, 327, 354, 693, 795, 1352, 1380
HpySE526I	ACGT	1 cut(s)	190
Hsp92I	GRCGYC	1 cut(s)	140
Hsp92II	CATG	6 cut(s)	77, 713, 838, 869, 1598, 1634
HspAI	GCGC	1 cut(s)	295
KflI	GGGWCCC	1 cut(s)	1309
Kzo9I	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
LguI	GCTCTTC	1 cut(s)	1680
LmnI	GCTCC	6 cut(s)	94, 1006, 1012, 1090, 1171, 1564
Lsp1109I	GCAGC	4 cut(s)	109, 112, 130, 778
LweI	GCATC	4 cut(s)	105, 679, 742, 1673
MaeI	CTAG	2 cut(s)	522, 1388
MaeII	ACGT	1 cut(s)	190
MaeIII	GTNAC	2 cut(s)	551, 1507
MalI	GATC	7 cut(s)	513, 924, 1239, 1476, 1711, 1738, 1783
MboI	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
MflI	RGATCY	1 cut(s)	1736
MhlI	GDGCHC	2 cut(s)	168, 1087
MlyI	GAGTC	3 cut(s)	143, 493, 1195
MmeI	TCCRAC	3 cut(s)	72, 180, 573
Mph1103I	ATGCAT	2 cut(s)	1596, 1666
MseI	TTAA	8 cut(s)	249, 416, 675, 729, 936, 1020, 1101, 1410
MslI	CAYNNNNRTG	1 cut(s)	1599
MspA1I	CMGCKG	1 cut(s)	103
MspI	CCGG	4 cut(s)	52, 176, 683, 1283
MspR9I	CCNGG	4 cut(s)	52, 177, 1089, 1272
MvaI	CCWGG	2 cut(s)	1089, 1272
MwoI	GCNNNNNNNGC	9 cut(s)	103, 172, 292, 323, 332, 706, 800, 1342, 1556
NciI	CCSGG	2 cut(s)	52, 177
NdeII	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
NlaIII	CATG	6 cut(s)	77, 713, 838, 869, 1598, 1634
NlaIV	GGNNCC	6 cut(s)	1086, 1167, 1287, 1310, 1311, 1738
NmeAIII	GCCGAG	1 cut(s)	196
NmuCI	GTSAC	1 cut(s)	1507
NsiI	ATGCAT	2 cut(s)	1596, 1666
PciSI	GCTCTTC	1 cut(s)	1680
PfeI	GAWTC	9 cut(s)	42, 64, 255, 307, 962, 1217, 1577, 1730, 1751
PflMI	CCANNNNNTGG	1 cut(s)	20
PfoI	TCCNGGA	2 cut(s)	50, 1087
PkrI	GCNGC	6 cut(s)	99, 102, 105, 120, 793, 877
PleI	GAGTC	3 cut(s)	143, 493, 1195
PmaCI	CACGTG	1 cut(s)	191
PmlI	CACGTG	1 cut(s)	191
PpsI	GAGTC	3 cut(s)	143, 493, 1195
Ppu21I	YACGTR	1 cut(s)	191
PpuMI	RGGWCCY	1 cut(s)	1309
PshBI	ATTAAT	2 cut(s)	1020, 1101
PsiI	TTATAA	1 cut(s)	1518
Psp5II	RGGWCCY	1 cut(s)	1309
Psp6I	CCWGG	2 cut(s)	1087, 1270
PspCI	CACGTG	1 cut(s)	191
PspFI	CCCAGC	1 cut(s)	666
PspGI	CCWGG	2 cut(s)	1087, 1270
PspN4I	GGNNCC	6 cut(s)	1086, 1167, 1287, 1310, 1311, 1738
PspPI	GGNCC	4 cut(s)	11, 185, 877, 1309
PspPPI	RGGWCCY	1 cut(s)	1309
PstI	CTGCAG	1 cut(s)	1621
PsuI	RGATCY	1 cut(s)	1736
RsaI	GTAC	2 cut(s)	427, 631
RsaNI	GTAC	2 cut(s)	426, 630
RseI	CAYNNNNRTG	1 cut(s)	1599
SapI	GCTCTTC	1 cut(s)	1680
SaqAI	TTAA	8 cut(s)	249, 416, 675, 729, 936, 1020, 1101, 1410
SatI	GCNGC	6 cut(s)	98, 101, 104, 119, 792, 876
Sau3AI	GATC	7 cut(s)	511, 922, 1237, 1474, 1709, 1736, 1781
Sau96I	GGNCC	4 cut(s)	11, 185, 877, 1309
ScaI	AGTACT	1 cut(s)	631
SchI	GAGTC	3 cut(s)	143, 493, 1195
ScrFI	CCNGG	4 cut(s)	52, 177, 1089, 1272
SduI	GDGCHC	2 cut(s)	168, 1087
SfaNI	GCATC	4 cut(s)	105, 679, 742, 1673
SfcI	CTRYAG	2 cut(s)	915, 1617
SinI	GGWCC	1 cut(s)	1309
SmiMI	CAYNNNNRTG	1 cut(s)	1599
SmlI	CTYRAG	2 cut(s)	281, 638
SmoI	CTYRAG	2 cut(s)	281, 638
SsiI	CCGC	6 cut(s)	82, 103, 431, 461, 875, 1184
SspI	AATATT	2 cut(s)	1018, 1099
SspMI	CTAG	2 cut(s)	522, 1388
StyD4I	CCNGG	4 cut(s)	50, 175, 1087, 1270
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	1 cut(s)	754
TaiI	ACGT	1 cut(s)	193
TaqI	TCGA	2 cut(s)	312, 605
TatI	WGTACW	1 cut(s)	629
TauI	GCSGC	2 cut(s)	106, 878
TfiI	GAWTC	9 cut(s)	42, 64, 255, 307, 962, 1217, 1577, 1730, 1751
Tru1I	TTAA	8 cut(s)	249, 416, 675, 729, 936, 1020, 1101, 1410
Tru9I	TTAA	8 cut(s)	249, 416, 675, 729, 936, 1020, 1101, 1410
TscAI	CASTG	3 cut(s)	1474, 1621, 1732
TseFI	GTSAC	1 cut(s)	1507
TseI	GCWGC	4 cut(s)	97, 100, 118, 791
Tsp45I	GTSAC	1 cut(s)	1507
TspDTI	ATGAA	3 cut(s)	665, 854, 1343
TspRI	CASTG	3 cut(s)	1474, 1621, 1732
Van91I	CCANNNNNTGG	1 cut(s)	20
VpaK11BI	GGWCC	1 cut(s)	1309
VspI	ATTAAT	2 cut(s)	1020, 1101
XapI	RAATTY	2 cut(s)	526, 601
XspI	CTAG	2 cut(s)	522, 1388
ZrmI	AGTACT	1 cut(s)	631
Zsp2I	ATGCAT	2 cut(s)	1596, 1666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.