Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0005416

Physical Location & Seq

Genomic Coordinates Reverse (-)

25144589 .. 25152039

Gene Structure 7451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG242300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGTTTCAGGCCCACTTGTTGGAGACGAAGCCAGCAACAGATTCTATTCCCGGAACACCCAGAATCCCAACCATGTCATCCGCCACTCGTCGGAGCAGCAGCGGCAGCGGCAGAGCTTGATGCAGCAGTTCCGAGGAGAAACGGCGTCGGTTGACTCCTCCAACAATGGGCTCGCCGAGCCGGGCAATGGGCCACGTGGGTATTCAAAGGTTGGGGACAAGGTGAGGATTTGCTTGAACTCCAAGACTGACATTAAGGGAATCAAGTGGAAGCTGATGGGTGAGCTTGAGCAAGTGAGGCGGCTGGTGAGGAATCTCGAAGCTAAGGAGGCTCAGTTTGCTGAAGGGTATGGTGTTTCTCAGCTTTCAGATACTAATTTGGTAGATAATAATGTTAGAACTACAATGCCATTTAGGGGTTTAAGTGTTTGTACGGCGGAGAATGAGAATAAGGGTGGTGAGTTTGCGGAGGAGAAGAAGAAGAAGAAGAAGAAGGGAGATCAGAGTTCTAGGAATTCAAAGTTACCTCCTTCTGGGGGTAACAAGAATAGGAAGAGTGAAGTTGGGCTGTTGTTGGGGTCGGATAAGAATTCGAGCAGATTGTTGAAGAGTTGTAGTACTTTGCTTGAGAAATTGATGAAGCATAAGCACGGCTGGGTGTTTAATAAGGCGGTAGATGCTAAGGGGCTTGGCCTGCATGATTACTATAAGATTGTTAAGCATCCGATGGATTTGGGGACGGTGAAGAGTAGGCTGGACAAGAATTGGTATAAGACGGCTGCTGAGTTTGCAGAGGATGTGAGACTTACATTCAATAATGCCATGTTGTATAACCCGAAAGAGCAGGATGTTCATGTGATGGCGGCCCTATTGTTGAAGTTGTTTGAAGAGAAATGGGTGGCTATAGAGGATCAGTATAAACTTAATAGGAGAGTTGAAATGAGTAGTGATTCCGAATTGCCGACCCCTGTTTCAAGAAATGCTGAAGTTCCTGCTCAGAATAATATTAATAGGAGGGTTGAAATAGGTAATAATTCAGAATTGCCAACCCCTATTTCAAGAAAGGTTCGGGCTCCAGGACATAATATTAATAGGAGAATTGGAATGGGTAATAATTCAGAATTGCCTACCCCTATAACAAGAAAGGTTCAGGCTCCTCTTCCTCCTCCTCCTTCTCCTCCGCCATTGGAGATGAGGACTCTGGATAGAGCAGAATCTATGACAAAGCCTGTTGATCCCAAGTTGAAACCTGCAAGTGTTGGTCATCCAGGTAGAAAGCCGGTTCCAAAGAAACCAAAAGCTCGGGACCCTGACAAAAGGGATATGAATATGCAGGAGAAGCAGAAGCTCAGCACAGACCTTCAGGCTTTGCCTTCTGAAAAACTAGCTAATGTTGTCCAGATTGTTAAAAAGAGAAGTCAAGGGATTTTACAACAAGACGATGAGATTGAATTGGACATTGGCAGTGTTGATCCTGAAACACTTTGGGAACTGGATAGATTTGTGACTAATTATAAAAAGAGCTTGACCAAAAATAAGAGAAAAGCTGAACTTGCTCCTCAATCAGTAGAAGAATCTGACTATGCTATGCATGAGAATGTGGCACAAGCCACTGCAGAGGCACAACATGAGGCCATAGCAGTTGAATACAACGACAATGCATCTTCCCCAGTTCAAAGAGAAGAGCGAGGTGAGAATGTGAGTGGATCAAGTAGTTCCAGCAGTGATTCTGGATCCTCTTCAAGTGATTCGGAGAATGGAAGTTCCTCTGGAAGTGGATCATATTCAAATCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

598

Amino Acids

66.52

Weight (kDa)

9.34

Isoelectric Point (pI)

49.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	205 - 289	5.7e-20	Bromodomain
BET	PF17035	442 - 503	4.6e-20	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17790 AT1G73150 AT1G73150
fragaria_vesca	FvH4_3g18680 FvH4_3g18680 FvH4_3g18680
malus_domestica	MD03G1240000.v1.1 MD11G1259300.v1.1
prunus_persica	Prupe.4G170600_v2.0.a1 Prupe.4G170600_v2.0.a1 Prupe.4G170600_v2.0.a1
pyrus_communis	pycom03g18520 pycom11g22910
rosa_chinensis	RchiOBHm_Chr5g0031501
rosa_laevigata	RLG00000033316
rosa_multiflora	Rmu_co8128242.1_g000001 Rmu_sc0006344.1_g000009 Rmu_sc0009888.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048820
rosa_rugosa	Rorug05G0126400 Rorug05G0126500 Rorug05G0126500 Rorug05G0126600 Rorug05G0126700
rosa_samantha	Rh5AG219300 Rh5BG218700 Rh5CG242300 Rh5DG224200
rosa_wichuraiana	Rw5G020000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
Acc36I	ACCTGC	1 cut(s)	1258
AccB7I	CCANNNNNTGG	1 cut(s)	20
AciI	CCGC	9 cut(s)	82, 103, 109, 301, 437, 467, 671, 863, 1181
AclWI	GGATC	7 cut(s)	918, 1229, 1466, 1714, 1728, 1741, 1786
AcsI	RAATTY	2 cut(s)	514, 589
AcuI	CTGAAG	3 cut(s)	363, 1005, 1346
AcvI	CACGTG	1 cut(s)	197
AcyI	GRCGYC	1 cut(s)	146
AfaI	GTAC	2 cut(s)	433, 619
AfiI	CCNNNNNNNGG	7 cut(s)	20, 91, 168, 188, 416, 533, 536
AjnI	CCWGG	2 cut(s)	1075, 1267
AjuI	GAANNNNNNNTTGG	4 cut(s)	1039, 1071, 1443, 1475
Alw26I	GTCTC	2 cut(s)	18, 796
AlwI	GGATC	7 cut(s)	918, 1229, 1466, 1714, 1728, 1741, 1786
Ama87I	CYCGRG	1 cut(s)	1302
AoxI	GGCC	5 cut(s)	10, 191, 691, 864, 1632
ApeKI	GCWGC	5 cut(s)	97, 100, 106, 124, 779
ApoI	RAATTY	2 cut(s)	514, 589
AseI	ATTAAT	2 cut(s)	1008, 1089
AspS9I	GGNCC	4 cut(s)	11, 191, 865, 1306
AsuC2I	CCSGG	2 cut(s)	52, 183
AsuHPI	GGTGA	6 cut(s)	235, 293, 319, 470, 754, 1703
AvaI	CYCGRG	1 cut(s)	1302
AvaII	GGWCC	1 cut(s)	1306
BamHI	GGATCC	1 cut(s)	1733
BanII	GRGCYC	2 cut(s)	174, 1075
BbrPI	CACGTG	1 cut(s)	197
BbvI	GCAGC	5 cut(s)	109, 112, 118, 136, 766
BccI	CCATC	3 cut(s)	271, 721, 853
BceAI	ACGGC	4 cut(s)	159, 450, 667, 792
BciT130I	CCWGG	2 cut(s)	1077, 1269
BcnI	CCSGG	2 cut(s)	52, 183
BcoDI	GTCTC	2 cut(s)	18, 796
BfaI	CTAG	2 cut(s)	510, 1385
BfmI	CTRYAG	2 cut(s)	903, 1614
BfuAI	ACCTGC	1 cut(s)	1258
BisI	GCNGC	9 cut(s)	98, 101, 104, 107, 110, 125, 302, 780, 864
BlpI	GCTNAGC	1 cut(s)	1349
BlsI	GCNGC	9 cut(s)	99, 102, 105, 108, 111, 126, 303, 781, 865
BmcAI	AGTACT	1 cut(s)	619
Bme1390I	CCNGG	4 cut(s)	52, 183, 1077, 1269
Bme18I	GGWCC	1 cut(s)	1306
BmeT110I	CYCGRG	1 cut(s)	1302
BmgT120I	GGNCC	4 cut(s)	11, 191, 865, 1306
BmiI	GGNNCC	6 cut(s)	1074, 1155, 1284, 1307, 1308, 1735
BmrFI	CCNGG	4 cut(s)	52, 183, 1077, 1269
BmrI	ACTGGG	1 cut(s)	1664
BmsI	GCATC	4 cut(s)	111, 667, 730, 1670
BmuI	ACTGGG	1 cut(s)	1664
BpmI	CTGGAG	1 cut(s)	1059
Bpu10I	CCTNAGC	2 cut(s)	324, 681
Bpu1102I	GCTNAGC	1 cut(s)	1349
BpuEI	CTTGAG	2 cut(s)	308, 647
BpuMI	CCSGG	2 cut(s)	52, 183
BsaAI	YACGTR	1 cut(s)	197
BsaHI	GRCGYC	1 cut(s)	146
BsaJI	CCNNGG	1 cut(s)	133
BsaXI	ACNNNNNCTCC	2 cut(s)	320, 350
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 91, 168, 188, 416, 533, 536
Bse118I	RCCGGY	1 cut(s)	1279
Bse1I	ACTGG	2 cut(s)	1497, 1670
Bse3DI	GCAATG	1 cut(s)	193
BseBI	CCWGG	2 cut(s)	1077, 1269
BseDI	CCNNGG	1 cut(s)	133
BseGI	GGATG	5 cut(s)	78, 721, 802, 853, 1264
BseLI	CCNNNNNNNGG	7 cut(s)	20, 91, 168, 188, 416, 533, 536
BseMI	GCAATG	1 cut(s)	193
BseMII	CTCAG	5 cut(s)	347, 374, 774, 1010, 1363
BseNI	ACTGG	2 cut(s)	1497, 1670
BseRI	GAGGAG	8 cut(s)	148, 150, 485, 1146, 1155, 1158, 1167, 1548
BseXI	GCAGC	5 cut(s)	109, 112, 118, 136, 766
BseYI	CCCAGC	1 cut(s)	654
BshFI	GGCC	5 cut(s)	12, 193, 693, 866, 1634
BsiHKCI	CYCGRG	1 cut(s)	1302
BsiSI	CCGG	3 cut(s)	52, 182, 1280
BslFI	GGGAC	3 cut(s)	230, 751, 1319
BslI	CCNNNNNNNGG	7 cut(s)	20, 91, 168, 188, 416, 533, 536
BsmAI	GTCTC	2 cut(s)	18, 796
BsmBI	CGTCTC	1 cut(s)	18
BsmFI	GGGAC	3 cut(s)	230, 751, 1319
BsnI	GGCC	5 cut(s)	12, 193, 693, 866, 1634
BsoBI	CYCGRG	1 cut(s)	1302
Bsp1286I	GDGCHC	2 cut(s)	174, 1075
Bsp143I	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
Bsp1720I	GCTNAGC	1 cut(s)	1349
BspACI	CCGC	9 cut(s)	82, 103, 109, 301, 437, 467, 671, 863, 1181
BspANI	GGCC	5 cut(s)	12, 193, 693, 866, 1634
BspCNI	CTCAG	5 cut(s)	346, 373, 775, 1009, 1362
BspLI	GGNNCC	6 cut(s)	1074, 1155, 1284, 1307, 1308, 1735
BspMAI	CTGCAG	1 cut(s)	1618
BspMI	ACCTGC	1 cut(s)	1258
BspPI	GGATC	7 cut(s)	918, 1229, 1466, 1714, 1728, 1741, 1786
BspQI	GCTCTTC	1 cut(s)	1677
BsrDI	GCAATG	1 cut(s)	193
BsrFI	RCCGGY	1 cut(s)	1279
BsrI	ACTGG	2 cut(s)	1497, 1670
BssAI	RCCGGY	1 cut(s)	1279
BssECI	CCNNGG	1 cut(s)	133
BssMI	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
BssNI	GRCGYC	1 cut(s)	146
Bst2UI	CCWGG	2 cut(s)	1077, 1269
Bst4CI	ACNGT	1 cut(s)	742
Bst6I	CTCTTC	7 cut(s)	548, 602, 740, 882, 1164, 1677, 1744
BstACI	GRCGYC	1 cut(s)	146
BstBAI	YACGTR	1 cut(s)	197
BstC8I	GCNNGC	3 cut(s)	34, 174, 695
BstDEI	CTNAG	7 cut(s)	324, 333, 360, 681, 783, 996, 1349
BstF5I	GGATG	5 cut(s)	78, 721, 802, 853, 1264
BstKTI	GATC	7 cut(s)	502, 913, 1237, 1474, 1709, 1736, 1781
BstMAI	GTCTC	2 cut(s)	18, 796
BstMBI	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
BstNI	CCWGG	2 cut(s)	1077, 1269
BstSCI	CCNGG	4 cut(s)	50, 181, 1075, 1267
BstSFI	CTRYAG	2 cut(s)	903, 1614
BstV1I	GCAGC	5 cut(s)	109, 112, 118, 136, 766
BstX2I	RGATCY	1 cut(s)	1733
BstYI	RGATCY	1 cut(s)	1733
BsuRI	GGCC	5 cut(s)	12, 193, 693, 866, 1634
BtsCI	GGATG	5 cut(s)	78, 721, 802, 853, 1264
BtsI	GCAGTG	3 cut(s)	1471, 1611, 1729
BtsIMutI	CAGTG	3 cut(s)	1471, 1611, 1729
BveI	ACCTGC	1 cut(s)	1258
Cac8I	GCNNGC	3 cut(s)	34, 174, 695
Cfr10I	RCCGGY	1 cut(s)	1279
Cfr13I	GGNCC	4 cut(s)	11, 191, 865, 1306
CseI	GACGC	1 cut(s)	135
Csp6I	GTAC	2 cut(s)	432, 618
CviAII	CATG	6 cut(s)	74, 698, 823, 854, 1592, 1628
CviQI	GTAC	2 cut(s)	432, 618
DdeI	CTNAG	7 cut(s)	324, 333, 360, 681, 783, 996, 1349
DpnI	GATC	7 cut(s)	501, 912, 1236, 1473, 1708, 1735, 1780
DpnII	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
Eam1104I	CTCTTC	7 cut(s)	548, 602, 740, 882, 1164, 1677, 1744
EarI	CTCTTC	7 cut(s)	548, 602, 740, 882, 1164, 1677, 1744
EciI	GGCGGA	3 cut(s)	71, 452, 1170
Eco24I	GRGCYC	2 cut(s)	174, 1075
Eco47I	GGWCC	1 cut(s)	1306
Eco57I	CTGAAG	3 cut(s)	363, 1005, 1346
Eco72I	CACGTG	1 cut(s)	197
Eco88I	CYCGRG	1 cut(s)	1302
EcoO109I	RGGNCCY	1 cut(s)	1306
EcoRI	GAATTC	2 cut(s)	514, 589
EcoRII	CCWGG	2 cut(s)	1075, 1267
EcoT22I	ATGCAT	2 cut(s)	1593, 1663
EcoT38I	GRGCYC	2 cut(s)	174, 1075
Esp3I	CGTCTC	1 cut(s)	18
FaeI	CATG	6 cut(s)	77, 701, 826, 857, 1595, 1631
FalI	AAGNNNNNCTT	2 cut(s)	1536, 1568
FaqI	GGGAC	3 cut(s)	230, 751, 1319
FatI	CATG	6 cut(s)	73, 697, 822, 853, 1591, 1627
Fnu4HI	GCNGC	9 cut(s)	98, 101, 104, 107, 110, 125, 302, 780, 864
FokI	GGATG	5 cut(s)	65, 708, 809, 860, 1251
FriOI	GRGCYC	2 cut(s)	174, 1075
Fsp4HI	GCNGC	9 cut(s)	98, 101, 104, 107, 110, 125, 302, 780, 864
FspBI	CTAG	2 cut(s)	510, 1385
GluI	GCNGC	9 cut(s)	98, 101, 104, 107, 110, 125, 302, 780, 864
GsaI	CCCAGC	1 cut(s)	658
GsuI	CTGGAG	1 cut(s)	1059
HaeIII	GGCC	5 cut(s)	12, 193, 693, 866, 1634
HapII	CCGG	3 cut(s)	52, 182, 1280
HgaI	GACGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	146
Hin1II	CATG	6 cut(s)	77, 701, 826, 857, 1595, 1631
HincII	GTYRAC	1 cut(s)	154
HindII	GTYRAC	1 cut(s)	154
HpaII	CCGG	3 cut(s)	52, 182, 1280
HphI	GGTGA	6 cut(s)	235, 293, 319, 470, 754, 1703
Hpy166II	GTNNAC	1 cut(s)	154
Hpy188III	TCNNGA	9 cut(s)	317, 975, 1059, 1202, 1304, 1399, 1475, 1731, 1770
Hpy8I	GTNNAC	1 cut(s)	154
Hpy99I	CGWCG	2 cut(s)	94, 151
HpyAV	CCTTC	6 cut(s)	338, 487, 540, 1182, 1370, 1383
HpyCH4III	ACNGT	1 cut(s)	742
HpyCH4IV	ACGT	1 cut(s)	196
HpyCH4V	TGCA	8 cut(s)	124, 697, 791, 1253, 1333, 1591, 1616, 1661
HpyF3I	CTNAG	7 cut(s)	324, 333, 360, 681, 783, 996, 1349
HpySE526I	ACGT	1 cut(s)	196
Hsp92I	GRCGYC	1 cut(s)	146
Hsp92II	CATG	6 cut(s)	77, 701, 826, 857, 1595, 1631
KflI	GGGWCCC	1 cut(s)	1306
Kzo9I	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
LguI	GCTCTTC	1 cut(s)	1677
LmnI	GCTCC	4 cut(s)	94, 1078, 1159, 1561
Lsp1109I	GCAGC	5 cut(s)	109, 112, 118, 136, 766
LweI	GCATC	4 cut(s)	111, 667, 730, 1670
MaeI	CTAG	2 cut(s)	510, 1385
MaeII	ACGT	1 cut(s)	196
MaeIII	GTNAC	3 cut(s)	522, 539, 1504
MalI	GATC	7 cut(s)	501, 912, 1236, 1473, 1708, 1735, 1780
MboI	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
MflI	RGATCY	1 cut(s)	1733
MhlI	GDGCHC	2 cut(s)	174, 1075
MlyI	GAGTC	2 cut(s)	149, 1192
MmeI	TCCRAC	3 cut(s)	72, 186, 561
Mph1103I	ATGCAT	2 cut(s)	1593, 1663
MseI	TTAA	8 cut(s)	255, 422, 663, 717, 924, 1008, 1089, 1407
MslI	CAYNNNNRTG	1 cut(s)	1596
MspA1I	CMGCKG	2 cut(s)	103, 109
MspI	CCGG	3 cut(s)	52, 182, 1280
MspR9I	CCNGG	4 cut(s)	52, 183, 1077, 1269
MvaI	CCWGG	2 cut(s)	1077, 1269
NciI	CCSGG	2 cut(s)	52, 183
NdeII	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
NlaIII	CATG	6 cut(s)	77, 701, 826, 857, 1595, 1631
NlaIV	GGNNCC	6 cut(s)	1074, 1155, 1284, 1307, 1308, 1735
NmeAIII	GCCGAG	1 cut(s)	202
NmuCI	GTSAC	1 cut(s)	1504
NsiI	ATGCAT	2 cut(s)	1593, 1663
PciSI	GCTCTTC	1 cut(s)	1677
PfeI	GAWTC	9 cut(s)	42, 64, 261, 313, 950, 1214, 1574, 1727, 1748
PflMI	CCANNNNNTGG	1 cut(s)	20
PfoI	TCCNGGA	2 cut(s)	50, 1075
PkrI	GCNGC	9 cut(s)	99, 102, 105, 108, 111, 126, 303, 781, 865
PleI	GAGTC	2 cut(s)	149, 1192
PmaCI	CACGTG	1 cut(s)	197
PmlI	CACGTG	1 cut(s)	197
PpsI	GAGTC	2 cut(s)	149, 1192
Ppu21I	YACGTR	1 cut(s)	197
PpuMI	RGGWCCY	1 cut(s)	1306
PshBI	ATTAAT	2 cut(s)	1008, 1089
PsiI	TTATAA	1 cut(s)	1515
Psp5II	RGGWCCY	1 cut(s)	1306
Psp6I	CCWGG	2 cut(s)	1075, 1267
PspCI	CACGTG	1 cut(s)	197
PspFI	CCCAGC	1 cut(s)	654
PspGI	CCWGG	2 cut(s)	1075, 1267
PspN4I	GGNNCC	6 cut(s)	1074, 1155, 1284, 1307, 1308, 1735
PspPI	GGNCC	4 cut(s)	11, 191, 865, 1306
PspPPI	RGGWCCY	1 cut(s)	1306
PstI	CTGCAG	1 cut(s)	1618
PsuI	RGATCY	1 cut(s)	1733
RsaI	GTAC	2 cut(s)	433, 619
RsaNI	GTAC	2 cut(s)	432, 618
RseI	CAYNNNNRTG	1 cut(s)	1596
SapI	GCTCTTC	1 cut(s)	1677
SaqAI	TTAA	8 cut(s)	255, 422, 663, 717, 924, 1008, 1089, 1407
SatI	GCNGC	9 cut(s)	98, 101, 104, 107, 110, 125, 302, 780, 864
Sau3AI	GATC	7 cut(s)	499, 910, 1234, 1471, 1706, 1733, 1778
Sau96I	GGNCC	4 cut(s)	11, 191, 865, 1306
ScaI	AGTACT	1 cut(s)	619
SchI	GAGTC	2 cut(s)	149, 1192
ScrFI	CCNGG	4 cut(s)	52, 183, 1077, 1269
SduI	GDGCHC	2 cut(s)	174, 1075
SfaNI	GCATC	4 cut(s)	111, 667, 730, 1670
SfcI	CTRYAG	2 cut(s)	903, 1614
SinI	GGWCC	1 cut(s)	1306
SmiMI	CAYNNNNRTG	1 cut(s)	1596
SmlI	CTYRAG	2 cut(s)	287, 626
SmoI	CTYRAG	2 cut(s)	287, 626
SsiI	CCGC	9 cut(s)	82, 103, 109, 301, 437, 467, 671, 863, 1181
SspI	AATATT	2 cut(s)	1006, 1087
SspMI	CTAG	2 cut(s)	510, 1385
StyD4I	CCNGG	4 cut(s)	50, 181, 1075, 1267
TaaI	ACNGT	1 cut(s)	742
TaiI	ACGT	1 cut(s)	199
TaqI	TCGA	2 cut(s)	318, 593
TatI	WGTACW	1 cut(s)	617
TauI	GCSGC	4 cut(s)	106, 112, 304, 866
TfiI	GAWTC	9 cut(s)	42, 64, 261, 313, 950, 1214, 1574, 1727, 1748
Tru1I	TTAA	8 cut(s)	255, 422, 663, 717, 924, 1008, 1089, 1407
Tru9I	TTAA	8 cut(s)	255, 422, 663, 717, 924, 1008, 1089, 1407
TscAI	CASTG	3 cut(s)	1471, 1618, 1729
TseFI	GTSAC	1 cut(s)	1504
TseI	GCWGC	5 cut(s)	97, 100, 106, 124, 779
Tsp45I	GTSAC	1 cut(s)	1504
TspDTI	ATGAA	3 cut(s)	653, 842, 1340
TspRI	CASTG	3 cut(s)	1471, 1618, 1729
Van91I	CCANNNNNTGG	1 cut(s)	20
VpaK11BI	GGWCC	1 cut(s)	1306
VspI	ATTAAT	2 cut(s)	1008, 1089
XapI	RAATTY	2 cut(s)	514, 589
XspI	CTAG	2 cut(s)	510, 1385
ZrmI	AGTACT	1 cut(s)	619
Zsp2I	ATGCAT	2 cut(s)	1593, 1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.