AT1G73160

Glycosyltransferase Family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014525
Physical Location & Seq
Forward (+)
27506485 .. 27508185
1701 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G73160.1

Sequence Viewer

Length: 1461 bp
ATGGCCTTCAAGAACCATTCTTCAAGAACAACTCTTTCTTCTTCTTCTTCCACTTCATTTTCATTCAGATTCACAACAATCATTACCTTAGCATTCATCTTTTGTTCTTCTTACTACATTTTCTTCTCACAGTTTGATTACTCTCCGGTGACTTCTTCACCGGAAAATCCTCCTTTCGCAGGAGATCTTCGAGACCTGACATTCCCTTGGAACAAACTCTCACTTGGACCAATCTCGGAGAAGCTCAAACTCGCTGTCTTCTGCAAGTCATGGCCTGTTGGTTCGATCCCCGGAGGAATGGAGCGTCATGCTTACACACTCTACACTTCTCTCGCCTCAAGAGGTCACGAGATTCACGTCTTCACGGTTTCTTCCGACAGAAGTAACCGAGAAGAGTACTACAACAAAGGAGATCTCCATGTCTACTTTGCTCCAAACGAACACGGCTCACTTAACCACTCTCGAGCTTTTGAGATCTTCCATAAAATCAACAGTCTAGATCATCATTCCTTTGATTATGTTCACACTGAGAGTGTTTCTCTGCCTCATTGGCGAGTCAAAATGGTGCCTAATGGTGACATAGCTGTGACATGGCACGGAATCTGGTACGAGATTATGCATTCAAATCTTTTTCAAGAACTTTCCAATGATCGTCCTAGCTCTGATCTTCAACAAACGATGCCTAGACTCGTCGATGAAATCAGATTCTTCCCAAAATATAAACAGCATATTTGCATTAGCAACAGCGCGCGCGAGGTACTAGTTAACATCTATCAACTTCCTAAGAGAAAAGTTCACGTTATAGTCAACGGTGTTGACCAAACCAAGTTCGTGTATTCTCCTGAATCTGGAGCTAGGTTCAGGGCGAAACACGGTATTCCTGACAATGGGACATATATTGTGATGGGTGTGTCTGGACGTTTGGTGAGAGACAAAGGACATCCACTTCTATATGAAGCGTTTGCTTTGCTCGTTAAAATGCACCCGAAAGTCTATTTGCTTGTGGCTGGATCTGGTCCTTGGGGCAAAAGATACGCGGAATTAGGCGAAAACGTTAGGGTTTTAGGAGCTTTAGAGCCAGAGGAGCTCTCTGGTTTCTACAACGCTTTAGATGTGTTTGTGAATCCGACGTTGAGACCACAGGGGCTTGATTTGACGATCATTGAGGCGATGCAGTGTGGGAAACCTGTCGTGGCACCTAATTATCCAAGCATTGTTGGGACAGTGGTTGTGGACGAGCGTTTTGGGTACACATTTTCTCCAAACGTGAGATCTCTTGTTGAGACTTTGGATTCTGTTGTAAGAGATGGGCCTAGGGTTTTGGAGATGAAAGGAATAGCTTGTAAGGGATACGCTCTTTCGATGTTTACAGCGACTCAAATGGCTTCGGCTTATGAGAGATTCTTTATGTGTATGAAAAATGAGAGGTACTGTAGGTACCCTCTTTCCACAGATAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_trans_1_4 Glyco_transf_4 Glycos_transf_1

Protein Analysis

486

Amino Acids

55.15

Weight (kDa)

8.5

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_4 PF13439 97 - 274 3.7e-20 Glycosyltransferase Family 4
Glyco_trans_4_4 PF13579 98 - 271 2e-08 Glycosyl transferase 4-like domain
Glycos_transf_1 PF00534 288 - 439 5.3e-23 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 302 - 436 6.2e-21 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014525)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73160
fragaria_vesca FvH4_3g18700
malus_domestica MD11G1259200.v1.1
prunus_persica Prupe.4G170700_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0031511
rosa_laevigata RLG00000033317 RLG00000033318
rosa_multiflora Rmu_sc0006344.1_g000008 Rmu_sc0009888.1_g000003
rosa_roxburghii Rroxscaffold_1G00048810
rosa_rugosa Rorug05G0126700
rosa_samantha Rh5AG219400 Rh5AG219500 Rh5BG218800 Rh5CG242400 Rh5DG224300
rosa_wichuraiana Rw5G020010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1437
AccB1I GGYRCC 3 cut(s) 565, 1195, 1437
AccI GTMKAC 1 cut(s) 423
AccII CGCG 4 cut(s) 749, 751, 753, 1037
AciI CCGC 1 cut(s) 1037
AclI AACGTT 1 cut(s) 1053
AclWI GGATC 2 cut(s) 280, 1018
AfaI GTAC 6 cut(s) 398, 608, 759, 1250, 1430, 1439
AfiI CCNNNNNNNGG 3 cut(s) 179, 848, 887
AgsI TTSAA 5 cut(s) 10, 24, 624, 635, 671
AhlI ACTAGT 1 cut(s) 760
AjiI CACGTC 1 cut(s) 358
AluBI AGCT 8 cut(s) 244, 467, 584, 660, 854, 1070, 1087, 1340
AluI AGCT 8 cut(s) 244, 467, 584, 660, 854, 1070, 1087, 1340
Alw21I GWGCWC 1 cut(s) 1089
Alw26I GTCTC 4 cut(s) 186, 924, 1129, 1277
AlwI GGATC 2 cut(s) 280, 1018
Ama87I CYCGRG 1 cut(s) 462
AoxI GGCC 3 cut(s) 3, 272, 1310
ArsI GACNNNNNNTTYG 4 cut(s) 240, 272, 1226, 1258
Asp718I GGTACC 1 cut(s) 1437
AspA2I CCTAGG 1 cut(s) 1313
AspLEI GCGC 3 cut(s) 749, 751, 753
AspS9I GGNCC 3 cut(s) 227, 1016, 1310
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 4 cut(s) 150, 160, 587, 937
AvaI CYCGRG 1 cut(s) 462
AvaII GGWCC 2 cut(s) 227, 1016
AvrII CCTAGG 1 cut(s) 1313
BanI GGYRCC 3 cut(s) 565, 1195, 1437
BanII GRGCYC 1 cut(s) 1089
BauI CACGAG 1 cut(s) 347
BbsI GAAGAC 2 cut(s) 250, 352
Bbv12I GWGCWC 1 cut(s) 1089
BccI CCATC 2 cut(s) 898, 1301
BceAI ACGGC 1 cut(s) 460
BciVI GTATCC 1 cut(s) 1343
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 4 cut(s) 186, 924, 1129, 1277
BcuI ACTAGT 1 cut(s) 760
BfaI CTAG 6 cut(s) 497, 657, 684, 761, 855, 1314
BfmI CTRYAG 1 cut(s) 1432
BfuI GTATCC 1 cut(s) 1343
BglI GCCNNNNNGGC 1 cut(s) 550
BglII AGATCT 4 cut(s) 184, 412, 474, 1271
BlnI CCTAGG 1 cut(s) 1313
BmcAI AGTACT 1 cut(s) 398
Bme1390I CCNGG 1 cut(s) 291
Bme18I GGWCC 2 cut(s) 227, 1016
BmeT110I CYCGRG 1 cut(s) 462
BmgBI CACGTC 1 cut(s) 358
BmgT120I GGNCC 3 cut(s) 227, 1016, 1310
BmiI GGNNCC 3 cut(s) 567, 1197, 1439
BmrFI CCNGG 1 cut(s) 291
BmsI GCATC 2 cut(s) 669, 1161
BpiI GAAGAC 2 cut(s) 250, 352
BplI GAGNNNNNCTC 4 cut(s) 523, 555, 1073, 1105
BpmI CTGGAG 1 cut(s) 870
Bpu10I CCTNAGC 1 cut(s) 88
BpuEI CTTGAG 1 cut(s) 322
BpuMI CCSGG 1 cut(s) 291
BsaI GGTCTC 2 cut(s) 186, 1129
BsaJI CCNNGG 4 cut(s) 206, 289, 1019, 1313
BsaWI WCCGGW 2 cut(s) 145, 160
BsaXI ACNNNNNCTCC 2 cut(s) 1243, 1273
Bsc4I CCNNNNNNNGG 3 cut(s) 179, 848, 887
BseDI CCNNGG 4 cut(s) 206, 289, 1019, 1313
BseGI GGATG 1 cut(s) 940
BseLI CCNNNNNNNGG 3 cut(s) 179, 848, 887
BseMII CTCAG 1 cut(s) 519
BsePI GCGCGC 2 cut(s) 747, 749
BseRI GAGGAG 1 cut(s) 1097
Bsh1236I CGCG 4 cut(s) 749, 751, 753, 1037
BshFI GGCC 3 cut(s) 5, 274, 1312
BshNI GGYRCC 3 cut(s) 565, 1195, 1437
BsiHKAI GWGCWC 1 cut(s) 1089
BsiHKCI CYCGRG 1 cut(s) 462
BsiSI CCGG 3 cut(s) 146, 161, 291
BslFI GGGAC 2 cut(s) 904, 1234
BslI CCNNNNNNNGG 3 cut(s) 179, 848, 887
BsmAI GTCTC 4 cut(s) 186, 924, 1129, 1277
BsmFI GGGAC 2 cut(s) 904, 1234
BsmI GAATGC 2 cut(s) 92, 619
BsnI GGCC 3 cut(s) 5, 274, 1312
Bso31I GGTCTC 2 cut(s) 186, 1129
BsoBI CYCGRG 1 cut(s) 462
Bsp1286I GDGCHC 1 cut(s) 1089
BspACI CCGC 1 cut(s) 1037
BspANI GGCC 3 cut(s) 5, 274, 1312
BspCNI CTCAG 1 cut(s) 520
BspFNI CGCG 4 cut(s) 749, 751, 753, 1037
BspLI GGNNCC 3 cut(s) 567, 1197, 1439
BspPI GGATC 2 cut(s) 280, 1018
BspT107I GGYRCC 3 cut(s) 565, 1195, 1437
BspTNI GGTCTC 2 cut(s) 186, 1129
BssECI CCNNGG 4 cut(s) 206, 289, 1019, 1313
BssHII GCGCGC 2 cut(s) 747, 749
BssSI CACGAG 1 cut(s) 347
BssT1I CCWWGG 3 cut(s) 206, 1019, 1313
Bst2BI CACGAG 1 cut(s) 347
Bst4CI ACNGT 7 cut(s) 132, 367, 494, 812, 875, 1225, 1433
Bst6I CTCTTC 1 cut(s) 387
BstC8I GCNNGC 2 cut(s) 749, 751
BstDEI CTNAG 3 cut(s) 88, 528, 783
BstENI CCTNNNNNAGG 1 cut(s) 177
BstF5I GGATG 1 cut(s) 940
BstFNI CGCG 4 cut(s) 749, 751, 753, 1037
BstHHI GCGC 3 cut(s) 749, 751, 753
BstMAI GTCTC 4 cut(s) 186, 924, 1129, 1277
BstMWI GCNNNNNNNGC 2 cut(s) 550, 1084
BstSCI CCNGG 1 cut(s) 289
BstSFI CTRYAG 1 cut(s) 1432
BstUI CGCG 4 cut(s) 749, 751, 753, 1037
BstV2I GAAGAC 2 cut(s) 250, 352
BstX2I RGATCY 5 cut(s) 184, 412, 474, 1010, 1271
BstYI RGATCY 5 cut(s) 184, 412, 474, 1010, 1271
BsuI GTATCC 1 cut(s) 1343
BsuRI GGCC 3 cut(s) 5, 274, 1312
BtgZI GCGATG 1 cut(s) 1184
BtrI CACGTC 1 cut(s) 358
BtsCI GGATG 1 cut(s) 940
BtsI GCAGTG 1 cut(s) 1181
BtsIMutI CAGTG 3 cut(s) 525, 1181, 1230
Cac8I GCNNGC 2 cut(s) 749, 751
CfoI GCGC 3 cut(s) 749, 751, 753
Cfr13I GGNCC 3 cut(s) 227, 1016, 1310
CseI GACGC 1 cut(s) 293
Csp6I GTAC 6 cut(s) 397, 607, 758, 1249, 1429, 1438
CviAII CATG 4 cut(s) 270, 308, 419, 591
CviQI GTAC 6 cut(s) 397, 607, 758, 1249, 1429, 1438
DdeI CTNAG 3 cut(s) 88, 528, 783
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Ecl136II GAGCTC 1 cut(s) 1087
Eco130I CCWWGG 3 cut(s) 206, 1019, 1313
Eco24I GRGCYC 1 cut(s) 1089
Eco31I GGTCTC 2 cut(s) 186, 1129
Eco47I GGWCC 2 cut(s) 227, 1016
Eco53kI GAGCTC 1 cut(s) 1087
Eco88I CYCGRG 1 cut(s) 462
EcoICRI GAGCTC 1 cut(s) 1087
EcoNI CCTNNNNNAGG 1 cut(s) 177
EcoT14I CCWWGG 3 cut(s) 206, 1019, 1313
EcoT22I ATGCAT 1 cut(s) 621
EcoT38I GRGCYC 1 cut(s) 1089
ErhI CCWWGG 3 cut(s) 206, 1019, 1313
FaeI CATG 4 cut(s) 273, 311, 422, 594
FaqI GGGAC 2 cut(s) 904, 1234
FatI CATG 4 cut(s) 269, 307, 418, 590
FblI GTMKAC 1 cut(s) 423
FokI GGATG 1 cut(s) 927
FriOI GRGCYC 1 cut(s) 1089
FspBI CTAG 6 cut(s) 497, 657, 684, 761, 855, 1314
GlaI GCGC 3 cut(s) 748, 750, 752
GsuI CTGGAG 1 cut(s) 870
HaeIII GGCC 3 cut(s) 5, 274, 1312
HapII CCGG 3 cut(s) 146, 161, 291
HgaI GACGC 1 cut(s) 293
HhaI GCGC 3 cut(s) 749, 751, 753
Hin1II CATG 4 cut(s) 273, 311, 422, 594
Hin6I GCGC 3 cut(s) 747, 749, 751
HinP1I GCGC 3 cut(s) 747, 749, 751
HincII GTYRAC 3 cut(s) 766, 808, 817
HindII GTYRAC 3 cut(s) 766, 808, 817
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 3 cut(s) 146, 161, 291
HphI GGTGA 4 cut(s) 150, 160, 587, 937
Hpy166II GTNNAC 9 cut(s) 424, 523, 766, 796, 808, 817, 1234, 1251, 1368
Hpy188I TCNGA 6 cut(s) 68, 238, 376, 664, 704, 1128
Hpy8I GTNNAC 9 cut(s) 424, 523, 766, 796, 808, 817, 1234, 1251, 1368
Hpy99I CGWCG 2 cut(s) 695, 1132
HpyAV CCTTC 1 cut(s) 16
HpyCH4III ACNGT 7 cut(s) 132, 367, 494, 812, 875, 1225, 1433
HpyCH4IV ACGT 6 cut(s) 357, 798, 919, 1053, 1130, 1266
HpyCH4V TGCA 5 cut(s) 264, 619, 735, 982, 1174
HpyF10VI GCNNNNNNNGC 2 cut(s) 550, 1084
HpyF3I CTNAG 3 cut(s) 88, 528, 783
HpySE526I ACGT 6 cut(s) 357, 798, 919, 1053, 1130, 1266
Hsp92II CATG 4 cut(s) 273, 311, 422, 594
HspAI GCGC 3 cut(s) 747, 749, 751
KpnI GGTACC 1 cut(s) 1441
KspAI GTTAAC 1 cut(s) 766
LmnI GCTCC 5 cut(s) 301, 436, 851, 1067, 1084
LweI GCATC 2 cut(s) 669, 1161
MaeI CTAG 6 cut(s) 497, 657, 684, 761, 855, 1314
MaeII ACGT 6 cut(s) 357, 798, 919, 1053, 1130, 1266
MaeIII GTNAC 5 cut(s) 148, 344, 383, 575, 586
MauBI CGCGCGCG 1 cut(s) 749
MflI RGATCY 5 cut(s) 184, 412, 474, 1010, 1271
MhlI GDGCHC 1 cut(s) 1089
MluCI AATT 2 cut(s) 1040, 1201
MlyI GAGTC 3 cut(s) 564, 681, 1369
MmeI TCCRAC 2 cut(s) 399, 1151
Mph1103I ATGCAT 1 cut(s) 621
MseI TTAA 3 cut(s) 453, 765, 975
MslI CAYNNNNRTG 1 cut(s) 584
MspI CCGG 3 cut(s) 146, 161, 291
MspR9I CCNGG 1 cut(s) 291
Mva1269I GAATGC 2 cut(s) 92, 619
MvnI CGCG 4 cut(s) 749, 751, 753, 1037
MwoI GCNNNNNNNGC 2 cut(s) 550, 1084
NciI CCSGG 1 cut(s) 291
NlaIII CATG 4 cut(s) 273, 311, 422, 594
NlaIV GGNNCC 3 cut(s) 567, 1197, 1439
NmuCI GTSAC 4 cut(s) 148, 344, 575, 586
NsiI ATGCAT 1 cut(s) 621
PaeR7I CTCGAG 1 cut(s) 462
PauI GCGCGC 2 cut(s) 747, 749
PcsI WCGNNNNNNNCGW 1 cut(s) 354
PctI GAATGC 2 cut(s) 92, 619
PfeI GAWTC 8 cut(s) 69, 352, 600, 705, 845, 1123, 1292, 1401
PleI GAGTC 3 cut(s) 563, 681, 1369
PpsI GAGTC 3 cut(s) 563, 681, 1369
Psp124BI GAGCTC 1 cut(s) 1089
Psp1406I AACGTT 1 cut(s) 1053
PspN4I GGNNCC 3 cut(s) 567, 1197, 1439
PspPI GGNCC 3 cut(s) 227, 1016, 1310
PsuI RGATCY 5 cut(s) 184, 412, 474, 1010, 1271
PteI GCGCGC 2 cut(s) 747, 749
RsaI GTAC 6 cut(s) 398, 608, 759, 1250, 1430, 1439
RsaNI GTAC 6 cut(s) 397, 607, 758, 1249, 1429, 1438
RseI CAYNNNNRTG 1 cut(s) 584
SacI GAGCTC 1 cut(s) 1089
SaqAI TTAA 3 cut(s) 453, 765, 975
Sau96I GGNCC 3 cut(s) 227, 1016, 1310
ScaI AGTACT 1 cut(s) 398
SchI GAGTC 3 cut(s) 564, 681, 1369
ScrFI CCNGG 1 cut(s) 291
SduI GDGCHC 1 cut(s) 1089
SfaNI GCATC 2 cut(s) 669, 1161
SfcI CTRYAG 1 cut(s) 1432
Sfr274I CTCGAG 1 cut(s) 462
SinI GGWCC 2 cut(s) 227, 1016
SlaI CTCGAG 1 cut(s) 462
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 2 cut(s) 337, 462
SmoI CTYRAG 2 cut(s) 337, 462
SpeI ACTAGT 1 cut(s) 760
Sse9I AATT 2 cut(s) 1040, 1201
SsiI CCGC 1 cut(s) 1037
SspMI CTAG 6 cut(s) 497, 657, 684, 761, 855, 1314
SstI GAGCTC 1 cut(s) 1089
StyD4I CCNGG 1 cut(s) 289
StyI CCWWGG 3 cut(s) 206, 1019, 1313
TaaI ACNGT 7 cut(s) 132, 367, 494, 812, 875, 1225, 1433
TaiI ACGT 6 cut(s) 360, 801, 922, 1056, 1133, 1269
TaqI TCGA 5 cut(s) 190, 284, 463, 693, 1361
TasI AATT 2 cut(s) 1040, 1201
TatI WGTACW 1 cut(s) 396
TfiI GAWTC 8 cut(s) 69, 352, 600, 705, 845, 1123, 1292, 1401
Tru1I TTAA 3 cut(s) 453, 765, 975
Tru9I TTAA 3 cut(s) 453, 765, 975
TscAI CASTG 3 cut(s) 532, 1181, 1230
TseFI GTSAC 4 cut(s) 148, 344, 575, 586
Tsp45I GTSAC 4 cut(s) 148, 344, 575, 586
TspDTI ATGAA 7 cut(s) 45, 51, 85, 711, 969, 1343, 1430
TspGWI ACGGA 1 cut(s) 612
TspRI CASTG 3 cut(s) 532, 1181, 1230
VpaK11BI GGWCC 2 cut(s) 227, 1016
XagI CCTNNNNNAGG 1 cut(s) 177
XbaI TCTAGA 1 cut(s) 496
XhoI CTCGAG 1 cut(s) 462
XmaJI CCTAGG 1 cut(s) 1313
XmiI GTMKAC 1 cut(s) 423
XspI CTAG 6 cut(s) 497, 657, 684, 761, 855, 1314
ZrmI AGTACT 1 cut(s) 398
Zsp2I ATGCAT 1 cut(s) 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.