AT1G75020

acyltransferase 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008281
Physical Location & Seq
Forward (+)
28170752 .. 28173678
2927 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G75020.2

Sequence Viewer

Length: 1137 bp
ATGGAAGTTTGCGGGGATCTGAAATCTGATAACTTAAAGAACCGCCCCTTGACTCCGCTTAGGATTCTGAGGGGCTTGATGATCCTGCTGGTGTTTCTGTCTACTGCTTTTATGTTTCTGCTGTACTTTGCACCAATAGCTGCTCTAGGTCTACGGCTTCTGAGTGTGCAACAATCTAGAAAAGTTGTTTCGTTAATCTTTGGTCTCTGGTTAGCTTTGTGGCCTTACCTGTTTGAAACGGTTAACGGGACAACTGTGGTGTTCTCTGGAGACATCATTCCGGTTGAGAAACGTGTTTTGCTTATTGCAAATCACAGGACGGAGGTGGATTGGATGTATCTGTGGAATATTGCCTTGAGAAAAGGCTGTCTTGGCTACATCAAATACGTGCTCAAGAGCAGCTTGATGAAATTACCTATTTTTGGTTGGGGCTTTCATGTTTTGGAATTTATCCCGGTGGAGAGGAAGCGGGAGGTCGACGAACCTGTTTTGCTTCAAATGCTTTCATCTTTTAAGGATCCTCAAGAACCCTTATGGCTTGCTCTATTCCCTGAAGGAACCGATTTCACTGAAGAGAAATGCAAGAGAAGCCAAAAGTTTGCAGCTGAAGTTGGTCTTCCAGCACTATCAAACGTACTTCTACCAAAAACAAGGGGTTTTGGCGTTTGCTTAGAAGTTCTTCATAACTCTTTGGATGCAGTATATGATTTGACTATCGCATATAAACCTCGCTGCCCATCTTTCATGGACAATGTATTCGGGACGGATCCTTCAGAAGTACATATCCACGTTCGGCGAGTTCTACTAAAGGAGATTCCAGCAAACGAGGCAGAATCTTCTGCTTGGTTAATGGATTCATTTAAGTTGAAGGACAAACTGCTATCCGATTTCAATGCTCAGGGGAAATTCCCCAATCAAAGACCAGAAGAAGAACTCTCTGTTCTCAAGTGCATTGCAACATTTGCAGGGGTAATATCTTTGACAGTAGTGTTCATATATCTGACCTTGTATTCACATAGCTGTTTCAAAGTATATGCTTGTCTAAGCGGCACATATTTAACTTTTGCTACATATTACAAGTTCCAACCCTCACCTGGCTGTTTTAGAGAAGATTCTTGTAAAGTTAAAAACCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110
Pfam Domains
Protein Families
Acyltransf_C Acyltransferase

Protein Analysis

378

Amino Acids

43.06

Weight (kDa)

8.57

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 90 - 199 1e-17 Acyltransferase
Acyltransf_C PF16076 254 - 309 3.6e-16 Acyltransferase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 101, 151, 477
AciI CCGC 5 cut(s) 12, 43, 56, 469, 1047
AclWI GGATC 6 cut(s) 24, 76, 512, 525, 761, 774
AcsI RAATTY 2 cut(s) 446, 905
AcuI CTGAAG 4 cut(s) 573, 591, 627, 756
AfaI GTAC 3 cut(s) 125, 636, 780
AfiI CCNNNNNNNGG 2 cut(s) 422, 1094
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 5 cut(s) 236, 497, 868, 892, 1027
AjnI CCWGG 1 cut(s) 1093
AluBI AGCT 5 cut(s) 140, 215, 402, 605, 1020
AluI AGCT 5 cut(s) 140, 215, 402, 605, 1020
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 2 cut(s) 209, 264
AlwI GGATC 6 cut(s) 24, 76, 512, 525, 761, 774
AoxI GGCC 1 cut(s) 221
ApeKI GCWGC 4 cut(s) 140, 399, 602, 732
ApoI RAATTY 2 cut(s) 446, 905
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
Asp700I GAANNNNTTC 1 cut(s) 678
AsuC2I CCSGG 1 cut(s) 455
AsuHPI GGTGA 1 cut(s) 1083
BamHI GGATCC 2 cut(s) 517, 766
BbsI GAAGAC 1 cut(s) 608
Bbv12I GWGCWC 1 cut(s) 393
BbvI GCAGC 4 cut(s) 127, 411, 614, 719
BccI CCATC 1 cut(s) 745
BceAI ACGGC 1 cut(s) 170
BcgI CGANNNNNNTGC 2 cut(s) 875, 909
BciT130I CCWGG 1 cut(s) 1095
BcnI CCSGG 1 cut(s) 455
BcoDI GTCTC 2 cut(s) 209, 264
BfaI CTAG 2 cut(s) 146, 177
BisI GCNGC 5 cut(s) 141, 400, 603, 733, 1048
BlsI GCNGC 5 cut(s) 142, 401, 604, 734, 1049
Bme1390I CCNGG 2 cut(s) 455, 1095
BmiI GGNNCC 3 cut(s) 519, 559, 768
BmrFI CCNGG 2 cut(s) 455, 1095
BmsI GCATC 1 cut(s) 685
BpiI GAAGAC 1 cut(s) 608
BpmI CTGGAG 1 cut(s) 288
Bpu10I CCTNAGC 2 cut(s) 59, 897
BpuEI CTTGAG 4 cut(s) 376, 377, 507, 929
BpuMI CCSGG 1 cut(s) 455
BsaAI YACGTR 1 cut(s) 388
BsaI GGTCTC 1 cut(s) 209
BsaWI WCCGGW 1 cut(s) 280
Bsc4I CCNNNNNNNGG 2 cut(s) 422, 1094
Bse3DI GCAATG 1 cut(s) 951
BseBI CCWGG 1 cut(s) 1095
BseGI GGATG 2 cut(s) 339, 700
BseLI CCNNNNNNNGG 2 cut(s) 422, 1094
BseMI GCAATG 1 cut(s) 951
BseMII CTCAG 3 cut(s) 59, 152, 911
BseXI GCAGC 4 cut(s) 127, 411, 614, 719
BshFI GGCC 1 cut(s) 223
BsiHKAI GWGCWC 1 cut(s) 393
BsiSI CCGG 2 cut(s) 281, 455
BslFI GGGAC 2 cut(s) 262, 775
BslI CCNNNNNNNGG 2 cut(s) 422, 1094
BsmAI GTCTC 2 cut(s) 209, 264
BsmFI GGGAC 2 cut(s) 262, 775
BsnI GGCC 1 cut(s) 223
Bso31I GGTCTC 1 cut(s) 209
Bsp1286I GDGCHC 1 cut(s) 393
Bsp143I GATC 4 cut(s) 16, 81, 517, 766
BspACI CCGC 5 cut(s) 12, 43, 56, 469, 1047
BspANI GGCC 1 cut(s) 223
BspCNI CTCAG 3 cut(s) 60, 153, 910
BspLI GGNNCC 3 cut(s) 519, 559, 768
BspPI GGATC 6 cut(s) 24, 76, 512, 525, 761, 774
BspTNI GGTCTC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 951
BssMI GATC 4 cut(s) 16, 81, 517, 766
Bst2UI CCWGG 1 cut(s) 1095
Bst4CI ACNGT 3 cut(s) 241, 256, 985
Bst6I CTCTTC 1 cut(s) 567
BstAPI GCANNNNNTGC 1 cut(s) 962
BstBAI YACGTR 1 cut(s) 388
BstC8I GCNNGC 1 cut(s) 540
BstDEI CTNAG 6 cut(s) 59, 68, 161, 670, 897, 1043
BstF5I GGATG 2 cut(s) 339, 700
BstKTI GATC 4 cut(s) 19, 84, 520, 769
BstMAI GTCTC 2 cut(s) 209, 264
BstMBI GATC 4 cut(s) 16, 81, 517, 766
BstMWI GCNNNNNNNGC 6 cut(s) 137, 372, 499, 588, 827, 962
BstNI CCWGG 1 cut(s) 1095
BstSCI CCNGG 2 cut(s) 453, 1093
BstV1I GCAGC 4 cut(s) 127, 411, 614, 719
BstV2I GAAGAC 1 cut(s) 608
BstX2I RGATCY 3 cut(s) 16, 517, 766
BstYI RGATCY 3 cut(s) 16, 517, 766
BsuRI GGCC 1 cut(s) 223
BtsCI GGATG 2 cut(s) 339, 700
BtsIMutI CAGTG 1 cut(s) 567
Cac8I GCNNGC 1 cut(s) 540
Csp6I GTAC 3 cut(s) 124, 635, 779
CviAII CATG 2 cut(s) 437, 745
CviQI GTAC 3 cut(s) 124, 635, 779
DdeI CTNAG 6 cut(s) 59, 68, 161, 670, 897, 1043
DpnI GATC 4 cut(s) 18, 83, 519, 768
DpnII GATC 4 cut(s) 16, 81, 517, 766
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
Eco31I GGTCTC 1 cut(s) 209
Eco57I CTGAAG 4 cut(s) 573, 591, 627, 756
EcoRII CCWGG 1 cut(s) 1093
FaeI CATG 2 cut(s) 440, 748
FalI AAGNNNNNCTT 6 cut(s) 354, 386, 386, 418, 600, 632
FaqI GGGAC 2 cut(s) 262, 775
FatI CATG 2 cut(s) 436, 744
FauI CCCGC 2 cut(s) 5, 462
FblI GTMKAC 3 cut(s) 101, 151, 477
Fnu4HI GCNGC 5 cut(s) 141, 400, 603, 733, 1048
FokI GGATG 2 cut(s) 346, 707
Fsp4HI GCNGC 5 cut(s) 141, 400, 603, 733, 1048
FspBI CTAG 2 cut(s) 146, 177
GluI GCNGC 5 cut(s) 141, 400, 603, 733, 1048
GsuI CTGGAG 1 cut(s) 288
HaeIII GGCC 1 cut(s) 223
HapII CCGG 2 cut(s) 281, 455
Hin1II CATG 2 cut(s) 440, 748
HincII GTYRAC 2 cut(s) 244, 478
HindII GTYRAC 2 cut(s) 244, 478
HinfI GANTC 6 cut(s) 52, 64, 814, 833, 854, 1112
HpaI GTTAAC 1 cut(s) 244
HpaII CCGG 2 cut(s) 281, 455
HphI GGTGA 1 cut(s) 1083
Hpy166II GTNNAC 4 cut(s) 102, 152, 244, 478
Hpy188I TCNGA 7 cut(s) 21, 28, 69, 162, 775, 886, 1002
Hpy188III TCNNGA 5 cut(s) 177, 267, 394, 524, 760
Hpy8I GTNNAC 4 cut(s) 102, 152, 244, 478
Hpy99I CGWCG 1 cut(s) 482
HpyAV CCTTC 3 cut(s) 548, 780, 862
HpyCH4III ACNGT 3 cut(s) 241, 256, 985
HpyCH4IV ACGT 4 cut(s) 292, 387, 633, 789
HpyCH4V TGCA 9 cut(s) 131, 169, 308, 582, 602, 698, 951, 956, 965
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 372, 499, 588, 827, 962
HpyF3I CTNAG 6 cut(s) 59, 68, 161, 670, 897, 1043
HpySE526I ACGT 4 cut(s) 292, 387, 633, 789
Hsp92II CATG 2 cut(s) 440, 748
KspAI GTTAAC 1 cut(s) 244
Kzo9I GATC 4 cut(s) 16, 81, 517, 766
Lsp1109I GCAGC 4 cut(s) 127, 411, 614, 719
LweI GCATC 1 cut(s) 685
MaeI CTAG 2 cut(s) 146, 177
MaeII ACGT 4 cut(s) 292, 387, 633, 789
MalI GATC 4 cut(s) 18, 83, 519, 768
MboI GATC 4 cut(s) 16, 81, 517, 766
MboII GAAGA 7 cut(s) 584, 608, 671, 828, 938, 941, 1121
MflI RGATCY 3 cut(s) 16, 517, 766
MhlI GDGCHC 1 cut(s) 393
MluCI AATT 3 cut(s) 410, 446, 905
MlyI GAGTC 1 cut(s) 46
MmeI TCCRAC 1 cut(s) 1108
MnlI CCTC 8 cut(s) 63, 316, 456, 466, 531, 738, 820, 1099
MroXI GAANNNNTTC 1 cut(s) 678
MseI TTAA 9 cut(s) 35, 194, 243, 513, 848, 861, 1058, 1125, 1135
MspA1I CMGCKG 1 cut(s) 605
MspI CCGG 2 cut(s) 281, 455
MspR9I CCNGG 2 cut(s) 455, 1095
MvaI CCWGG 1 cut(s) 1095
MwoI GCNNNNNNNGC 6 cut(s) 137, 372, 499, 588, 827, 962
NciI CCSGG 1 cut(s) 455
NdeII GATC 4 cut(s) 16, 81, 517, 766
NlaIII CATG 2 cut(s) 440, 748
NlaIV GGNNCC 3 cut(s) 519, 559, 768
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 5 cut(s) 64, 814, 833, 854, 1112
PkrI GCNGC 5 cut(s) 142, 401, 604, 734, 1049
PleI GAGTC 1 cut(s) 46
PpsI GAGTC 1 cut(s) 46
Ppu21I YACGTR 1 cut(s) 388
Psp6I CCWGG 1 cut(s) 1093
PspGI CCWGG 1 cut(s) 1093
PspN4I GGNNCC 3 cut(s) 519, 559, 768
PsuI RGATCY 3 cut(s) 16, 517, 766
PvuII CAGCTG 1 cut(s) 605
RsaI GTAC 3 cut(s) 125, 636, 780
RsaNI GTAC 3 cut(s) 124, 635, 779
SalI GTCGAC 1 cut(s) 476
SaqAI TTAA 9 cut(s) 35, 194, 243, 513, 848, 861, 1058, 1125, 1135
SatI GCNGC 5 cut(s) 141, 400, 603, 733, 1048
Sau3AI GATC 4 cut(s) 16, 81, 517, 766
SchI GAGTC 1 cut(s) 46
ScrFI CCNGG 2 cut(s) 455, 1095
SduI GDGCHC 1 cut(s) 393
SfaNI GCATC 1 cut(s) 685
SmlI CTYRAG 4 cut(s) 355, 392, 522, 944
SmoI CTYRAG 4 cut(s) 355, 392, 522, 944
Sse9I AATT 3 cut(s) 410, 446, 905
SsiI CCGC 5 cut(s) 12, 43, 56, 469, 1047
SspI AATATT 1 cut(s) 349
SspMI CTAG 2 cut(s) 146, 177
StyD4I CCNGG 2 cut(s) 453, 1093
TaaI ACNGT 3 cut(s) 241, 256, 985
TaiI ACGT 4 cut(s) 295, 390, 636, 792
TaqI TCGA 1 cut(s) 477
TasI AATT 3 cut(s) 410, 446, 905
TatI WGTACW 2 cut(s) 123, 778
TauI GCSGC 1 cut(s) 1050
TfiI GAWTC 5 cut(s) 64, 814, 833, 854, 1112
Tru1I TTAA 9 cut(s) 35, 194, 243, 513, 848, 861, 1058, 1125, 1135
Tru9I TTAA 9 cut(s) 35, 194, 243, 513, 848, 861, 1058, 1125, 1135
TscAI CASTG 1 cut(s) 574
TseI GCWGC 4 cut(s) 140, 399, 602, 732
TspDTI ATGAA 7 cut(s) 422, 425, 495, 671, 733, 846, 982
TspGWI ACGGA 2 cut(s) 335, 779
TspRI CASTG 1 cut(s) 574
XapI RAATTY 2 cut(s) 446, 905
XbaI TCTAGA 1 cut(s) 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 1091
XmiI GTMKAC 3 cut(s) 101, 151, 477
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 2 cut(s) 146, 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.