Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0008281

Physical Location & Seq

Genomic Coordinates Forward (+)

64103115 .. 64108927

Gene Structure 5813 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG415900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGTACTTGTGGGATCTTGCATTGCGAAAAGGGTCCCTCGGATATGTTAAATATGTGCTCAAGAGCAGCTTGATGAAGCTGCCTGTTTTCGGTTGGGGGTTCCACGTTCTGGAGTTCATTCCTTTGAAGAGGAAGTGGGAAGTTGATGAACCAATTCTCCGGAAAATGCTATTAAGTTTTGCTGATCCTCGAGACCCTCTCTGGCTTTCTATTTTTCCTGAAGGAACTGATTACGATGAAGAAAAATGCAAAAAGAGCCAGACATTTGCTGCTGAAAATGGACTTCCTGTGCTGTCACATGTGCTACTTCCAAGGACTAAAGGTTTTTGTGCTTGCTTAGAAGCCCTAAGAGGTTCTTTGGATGCAGTTTATGACTTGACAATTGCATACAAGAATCAATGCCCTTCGTTTATGGACAATGCATTTGGTGTAGATCCTTCAGAAGTACACATTCATGTTCGGCGTATCTCAATGGAAGATATCCCGGAGTCTAGCACAGATGCTGCATCTTGGTTAGTGGACACATTCCATCTCAAGGACAACATGCTGTCAGATTTCCATACTCGAGGCCATTTTCCTAATGAAGGAGGAGAAGAAGACATTTCTGCGTTCAAGGGTTTGGTAAATTTTATGTTGATACTTATTTTGACAGTGGTTATCATTTACCTTACCATTTTTTCATCGGTCTGGTTTAAAATATACATCGGTTTATCATGTGCATACCTTGCTTCCGCAACATATTTTGAAATCCAACCGGTGCCAGTATTAGACTTTGTTAAAGCAACATTGGTTTGCAATAGACTCAGATATACAGAAAACCTAGTTTCCGCAACCGTTTTTACGCTGCAAAACCGATGCCCCTACACAGTCTGGCCAGGCACACTCTCCGGAAACGGCGCCGCAGTTCTCGGCGAAGGCGGTTTCGCCATGTTCCCCGGTGCATTAGTCCAGCTCACAGCCCCGGCCGGCTGGTCCGGCCGCTTCTGGGCCAGAACCGGCTGCAACTTCGACGAAGCCGGTAACGGAAACTGCCTCACCGGAGACTGCGGCTCCCTAAAATGCACCGGCGGCGGCGCACCTCCCGTCACCTTGGCTGAGTTCACCATCGGGTCGAGCGTAACCGACAAGGACTTCTATGACGTCAGCCTCGTCGACGGTTACAACGTCGGCATGGGGCTGAGGGCCACCGGAGGAGACGGCGACTGCCAGTACGCTGGGTGCGTGACGGACTTGAACGCCAACTGCCCGCCCGAGTTGCGGGTCACGGATTCGGGTTCGGGTGTTGTGGTGGCTTGTAAGAGCGCGTGCGAGGCGTTCAACGCGCCTGAGTTTTGCTGCACCGGCGACCACGCCACCCCGCAGACTTGCTCTCCGACTCAGTACTCCGCCATGTTCAAGAGTGCGTGTCCCACGGCGTATAGCTACGCTTATGATGATGCTTCAAGCACCTGTACCTGTACCGGGTCGGATTACTTGATCACATTTTGCCCCACCGGATCATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransf_C Acyltransferase

Protein Analysis

501

Amino Acids

54.5

Weight (kDa)

4.9

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	8 - 100	1.4e-06	Acyltransferase
Acyltransf_C	PF16076	143 - 211	3.8e-17	Acyltransferase C-terminus
Thaumatin	PF00314	284 - 497	6.9e-79	Thaumatin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75020 AT1G75020
fragaria_vesca	FvH4_2g40310 FvH4_2g40310
malus_domestica	MD08G1036500.v1.1
prunus_persica	Prupe.1G383800_v2.0.a1 Prupe.1G383800_v2.0.a1 Prupe.1G383800_v2.0.a1 Prupe.1G383800_v2.0.a1
pyrus_communis	pycom08g02920 pycom15g02850
rosa_chinensis	RchiOBHm_Chr6g0300431
rosa_laevigata	RLG00000011338
rosa_multiflora	Rmu_co8264011.1_g000001 Rmu_sc0003793.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167790
rosa_rugosa	Rorug06G0295900 Rorug06G0296000
rosa_samantha	Rh6AG408700 Rh6BG415900 Rh6CG423400 Rh6DG409000
rosa_wichuraiana	Rw6G035750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1143
AccB1I	GGYRCC	2 cut(s)	757, 896
AccB7I	CCANNNNNTGG	1 cut(s)	109
AccI	GTMKAC	1 cut(s)	1152
AccII	CGCG	2 cut(s)	1304, 1322
AccIII	TCCGGA	2 cut(s)	159, 887
AclWI	GGATC	4 cut(s)	21, 179, 428, 1504
AcoI	YGGCCR	3 cut(s)	872, 963, 976
AcsI	RAATTY	1 cut(s)	625
AcuI	CTGAAG	2 cut(s)	240, 423
AcyI	GRCGYC	2 cut(s)	897, 1140
AfaI	GTAC	6 cut(s)	5, 447, 1211, 1382, 1453, 1459
AfiI	CCNNNNNNNGG	7 cut(s)	89, 109, 535, 584, 985, 1257, 1461
AflIII	ACRYGT	1 cut(s)	298
AgeI	ACCGGT	1 cut(s)	754
AgsI	TTSAA	7 cut(s)	127, 613, 746, 1234, 1318, 1396, 1443
AjnI	CCWGG	1 cut(s)	874
AloI	GAACNNNNNNTCC	2 cut(s)	141, 173
AluBI	AGCT	4 cut(s)	69, 79, 952, 1422
AluI	AGCT	4 cut(s)	69, 79, 952, 1422
Alw21I	GWGCWC	1 cut(s)	60
Alw26I	GTCTC	3 cut(s)	186, 1035, 1188
AlwI	GGATC	4 cut(s)	21, 179, 428, 1504
AlwNI	CAGNNNCTG	1 cut(s)	503
Ama87I	CYCGRG	3 cut(s)	189, 564, 1250
Aor13HI	TCCGGA	2 cut(s)	159, 887
AoxI	GGCC	6 cut(s)	568, 872, 963, 976, 987, 1182
ApeKI	GCWGC	7 cut(s)	66, 79, 269, 503, 844, 999, 1335
ApoI	RAATTY	1 cut(s)	625
ArsI	GACNNNNNNTTYG	2 cut(s)	407, 439
AsiGI	ACCGGT	1 cut(s)	754
Asp700I	GAANNNNTTC	1 cut(s)	153
AspLEI	GCGC	4 cut(s)	899, 1076, 1304, 1324
AspS9I	GGNCC	4 cut(s)	33, 972, 987, 1182
AsuC2I	CCSGG	4 cut(s)	485, 936, 962, 1462
AsuHPI	GGTGA	3 cut(s)	1027, 1078, 1093
AvaI	CYCGRG	3 cut(s)	189, 564, 1250
AvaII	GGWCC	2 cut(s)	33, 972
BalI	TGGCCA	1 cut(s)	874
BanI	GGYRCC	2 cut(s)	757, 896
BbsI	GAAGAC	1 cut(s)	603
Bbv12I	GWGCWC	1 cut(s)	60
BbvCI	CCTCAGC	1 cut(s)	1178
BbvI	GCAGC	7 cut(s)	66, 78, 256, 490, 831, 986, 1322
BccI	CCATC	2 cut(s)	537, 1112
BceAI	ACGGC	3 cut(s)	910, 1213, 1428
BciT130I	CCWGG	1 cut(s)	876
BclI	TGATCA	1 cut(s)	1476
BcnI	CCSGG	4 cut(s)	485, 936, 962, 1462
BcoDI	GTCTC	3 cut(s)	186, 1035, 1188
BfaI	CTAG	2 cut(s)	492, 821
BfoI	RGCGCY	1 cut(s)	900
BmcAI	AGTACT	1 cut(s)	1382
Bme1390I	CCNGG	5 cut(s)	485, 876, 936, 962, 1462
Bme18I	GGWCC	2 cut(s)	33, 972
BmeT110I	CYCGRG	3 cut(s)	189, 564, 1250
BmgT120I	GGNCC	4 cut(s)	33, 972, 987, 1182
BmiI	GGNNCC	6 cut(s)	34, 35, 101, 759, 898, 1051
BmrFI	CCNGG	5 cut(s)	485, 876, 936, 962, 1462
BmsI	GCATC	5 cut(s)	352, 490, 515, 845, 1426
BpiI	GAAGAC	1 cut(s)	603
BplI	GAGNNNNNCTC	2 cut(s)	183, 215
BpmI	CTGGAG	1 cut(s)	131
Bpu10I	CCTNAGC	1 cut(s)	1178
BpuEI	CTTGAG	2 cut(s)	44, 518
BpuMI	CCSGG	4 cut(s)	485, 936, 962, 1462
BsaHI	GRCGYC	2 cut(s)	897, 1140
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	6 cut(s)	37, 311, 934, 960, 1089, 1410
BsaWI	WCCGGW	6 cut(s)	159, 754, 887, 1037, 1187, 1493
BsaXI	ACNNNNNCTCC	6 cut(s)	141, 171, 1034, 1064, 1354, 1384
Bsc4I	CCNNNNNNNGG	7 cut(s)	89, 109, 535, 584, 985, 1257, 1461
Bse118I	RCCGGY	6 cut(s)	754, 965, 995, 1016, 1064, 1340
Bse1I	ACTGG	2 cut(s)	761, 1207
Bse3DI	GCAATG	1 cut(s)	20
BseAI	TCCGGA	2 cut(s)	159, 887
BseBI	CCWGG	1 cut(s)	876
BseDI	CCNNGG	6 cut(s)	37, 311, 934, 960, 1089, 1410
BseGI	GGATG	1 cut(s)	367
BseLI	CCNNNNNNNGG	7 cut(s)	89, 109, 535, 584, 985, 1257, 1461
BseMI	GCAATG	1 cut(s)	20
BseMII	CTCAG	5 cut(s)	817, 1086, 1169, 1317, 1391
BseNI	ACTGG	2 cut(s)	761, 1207
BseRI	GAGGAG	2 cut(s)	603, 1206
BseX3I	CGGCCG	2 cut(s)	963, 976
BseXI	GCAGC	7 cut(s)	66, 78, 256, 490, 831, 986, 1322
BseYI	CCCAGC	1 cut(s)	1214
BsgI	GTGCAG	1 cut(s)	1321
Bsh1236I	CGCG	2 cut(s)	1304, 1322
Bsh1285I	CGRYCG	2 cut(s)	966, 979
BshFI	GGCC	6 cut(s)	570, 874, 965, 978, 989, 1184
BshNI	GGYRCC	2 cut(s)	757, 896
BshTI	ACCGGT	1 cut(s)	754
BsiEI	CGRYCG	2 cut(s)	966, 979
BsiHKAI	GWGCWC	1 cut(s)	60
BsiHKCI	CYCGRG	3 cut(s)	189, 564, 1250
BslFI	GGGAC	2 cut(s)	19, 1392
BslI	CCNNNNNNNGG	7 cut(s)	89, 109, 535, 584, 985, 1257, 1461
BsmAI	GTCTC	3 cut(s)	186, 1035, 1188
BsmBI	CGTCTC	1 cut(s)	1188
BsmFI	GGGAC	2 cut(s)	19, 1392
BsnI	GGCC	6 cut(s)	570, 874, 965, 978, 989, 1184
Bso31I	GGTCTC	1 cut(s)	186
BsoBI	CYCGRG	3 cut(s)	189, 564, 1250
Bsp1286I	GDGCHC	1 cut(s)	60
Bsp13I	TCCGGA	2 cut(s)	159, 887
Bsp143I	GATC	5 cut(s)	13, 184, 433, 1476, 1496
BspANI	GGCC	6 cut(s)	570, 874, 965, 978, 989, 1184
BspCNI	CTCAG	5 cut(s)	816, 1087, 1170, 1318, 1390
BspEI	TCCGGA	2 cut(s)	159, 887
BspFNI	CGCG	2 cut(s)	1304, 1322
BspLI	GGNNCC	6 cut(s)	34, 35, 101, 759, 898, 1051
BspPI	GGATC	4 cut(s)	21, 179, 428, 1504
BspT107I	GGYRCC	2 cut(s)	757, 896
BspTNI	GGTCTC	1 cut(s)	186
BsrDI	GCAATG	1 cut(s)	20
BsrFI	RCCGGY	6 cut(s)	754, 965, 995, 1016, 1064, 1340
BsrI	ACTGG	2 cut(s)	761, 1207
BssAI	RCCGGY	6 cut(s)	754, 965, 995, 1016, 1064, 1340
BssECI	CCNNGG	6 cut(s)	37, 311, 934, 960, 1089, 1410
BssMI	GATC	5 cut(s)	13, 184, 433, 1476, 1496
BssNI	GRCGYC	2 cut(s)	897, 1140
BssT1I	CCWWGG	2 cut(s)	311, 1089
Bst2UI	CCWGG	1 cut(s)	876
Bst4CI	ACNGT	4 cut(s)	652, 835, 868, 1157
Bst6I	CTCTTC	1 cut(s)	122
BstACI	GRCGYC	2 cut(s)	897, 1140
BstAPI	GCANNNNNTGC	1 cut(s)	725
BstC8I	GCNNGC	4 cut(s)	334, 967, 1247, 1306
BstDEI	CTNAG	7 cut(s)	337, 347, 803, 1095, 1178, 1326, 1377
BstDSI	CCRYGG	1 cut(s)	1410
BstENI	CCTNNNNNAGG	1 cut(s)	582
BstF5I	GGATG	1 cut(s)	367
BstFNI	CGCG	2 cut(s)	1304, 1322
BstH2I	RGCGCY	1 cut(s)	900
BstHHI	GCGC	4 cut(s)	899, 1076, 1304, 1324
BstKTI	GATC	5 cut(s)	16, 187, 436, 1479, 1499
BstMAI	GTCTC	3 cut(s)	186, 1035, 1188
BstMBI	GATC	5 cut(s)	13, 184, 433, 1476, 1496
BstMCI	CGRYCG	2 cut(s)	966, 979
BstMWI	GCNNNNNNNGC	8 cut(s)	255, 725, 975, 1068, 1255, 1310, 1319, 1341
BstNI	CCWGG	1 cut(s)	876
BstNSI	RCATGY	2 cut(s)	302, 547
BstSCI	CCNGG	5 cut(s)	483, 874, 934, 960, 1460
BstUI	CGCG	2 cut(s)	1304, 1322
BstV1I	GCAGC	7 cut(s)	66, 78, 256, 490, 831, 986, 1322
BstV2I	GAAGAC	1 cut(s)	603
BstX2I	RGATCY	2 cut(s)	13, 433
BstXI	CCANNNNNNTGG	1 cut(s)	1214
BstYI	RGATCY	2 cut(s)	13, 433
BstZI	CGGCCG	2 cut(s)	963, 976
BsuRI	GGCC	6 cut(s)	570, 874, 965, 978, 989, 1184
BtgI	CCRYGG	1 cut(s)	1410
BtsCI	GGATG	1 cut(s)	367
BtsIMutI	CAGTG	1 cut(s)	657
Cac8I	GCNNGC	4 cut(s)	334, 967, 1247, 1306
CaiI	CAGNNNCTG	1 cut(s)	503
CfoI	GCGC	4 cut(s)	899, 1076, 1304, 1324
Cfr10I	RCCGGY	6 cut(s)	754, 965, 995, 1016, 1064, 1340
Cfr13I	GGNCC	4 cut(s)	33, 972, 987, 1182
Csp6I	GTAC	6 cut(s)	4, 446, 1210, 1381, 1452, 1458
CspAI	ACCGGT	1 cut(s)	754
CviAII	CATG	7 cut(s)	299, 455, 544, 714, 928, 1171, 1390
CviQI	GTAC	6 cut(s)	4, 446, 1210, 1381, 1452, 1458
DdeI	CTNAG	7 cut(s)	337, 347, 803, 1095, 1178, 1326, 1377
DinI	GGCGCC	1 cut(s)	898
DpnI	GATC	5 cut(s)	15, 186, 435, 1478, 1498
DpnII	GATC	5 cut(s)	13, 184, 433, 1476, 1496
DraI	TTTAAA	1 cut(s)	694
EaeI	YGGCCR	3 cut(s)	872, 963, 976
EagI	CGGCCG	2 cut(s)	963, 976
Eam1104I	CTCTTC	1 cut(s)	122
EarI	CTCTTC	1 cut(s)	122
EciI	GGCGGA	1 cut(s)	1375
EclXI	CGGCCG	2 cut(s)	963, 976
Eco130I	CCWWGG	2 cut(s)	311, 1089
Eco31I	GGTCTC	1 cut(s)	186
Eco32I	GATATC	1 cut(s)	481
Eco47I	GGWCC	2 cut(s)	33, 972
Eco52I	CGGCCG	2 cut(s)	963, 976
Eco57I	CTGAAG	2 cut(s)	240, 423
Eco88I	CYCGRG	3 cut(s)	189, 564, 1250
EcoNI	CCTNNNNNAGG	1 cut(s)	582
EcoO109I	RGGNCCY	1 cut(s)	33
EcoRII	CCWGG	1 cut(s)	874
EcoRV	GATATC	1 cut(s)	481
EcoT14I	CCWWGG	2 cut(s)	311, 1089
EcoT22I	ATGCAT	1 cut(s)	424
EgeI	GGCGCC	1 cut(s)	898
EheI	GGCGCC	1 cut(s)	898
ErhI	CCWWGG	2 cut(s)	311, 1089
Esp3I	CGTCTC	1 cut(s)	1188
FaeI	CATG	7 cut(s)	302, 458, 547, 717, 931, 1174, 1393
FalI	AAGNNNNNCTT	4 cut(s)	53, 85, 340, 372
FaqI	GGGAC	2 cut(s)	19, 1392
FatI	CATG	7 cut(s)	298, 454, 543, 713, 927, 1170, 1389
FauI	CCCGC	3 cut(s)	1251, 1254, 1365
FbaI	TGATCA	1 cut(s)	1476
FblI	GTMKAC	1 cut(s)	1152
FokI	GGATG	1 cut(s)	374
FspBI	CTAG	2 cut(s)	492, 821
GlaI	GCGC	4 cut(s)	898, 1075, 1303, 1323
GsaI	CCCAGC	1 cut(s)	1218
GsuI	CTGGAG	1 cut(s)	131
HaeII	RGCGCY	1 cut(s)	900
HaeIII	GGCC	6 cut(s)	570, 874, 965, 978, 989, 1184
HhaI	GCGC	4 cut(s)	899, 1076, 1304, 1324
Hin1I	GRCGYC	2 cut(s)	897, 1140
Hin1II	CATG	7 cut(s)	302, 458, 547, 717, 931, 1174, 1393
Hin6I	GCGC	4 cut(s)	897, 1074, 1302, 1322
HinP1I	GCGC	4 cut(s)	897, 1074, 1302, 1322
HincII	GTYRAC	1 cut(s)	1153
HindII	GTYRAC	1 cut(s)	1153
HinfI	GANTC	5 cut(s)	394, 488, 801, 1268, 1375
HphI	GGTGA	3 cut(s)	1027, 1078, 1093
Hpy166II	GTNNAC	4 cut(s)	448, 520, 1101, 1153
Hpy188I	TCNGA	6 cut(s)	41, 442, 553, 806, 1374, 1468
Hpy188III	TCNNGA	8 cut(s)	61, 110, 160, 191, 218, 888, 1396, 1503
Hpy8I	GTNNAC	4 cut(s)	448, 520, 1101, 1153
Hpy99I	CGWCG	4 cut(s)	1013, 1154, 1157, 1169
HpyAV	CCTTC	5 cut(s)	215, 414, 447, 578, 908
HpyCH4III	ACNGT	4 cut(s)	652, 835, 868, 1157
HpyCH4IV	ACGT	3 cut(s)	105, 1140, 1164
HpyF10VI	GCNNNNNNNGC	8 cut(s)	255, 725, 975, 1068, 1255, 1310, 1319, 1341
HpyF3I	CTNAG	7 cut(s)	337, 347, 803, 1095, 1178, 1326, 1377
HpySE526I	ACGT	3 cut(s)	105, 1140, 1164
Hsp92I	GRCGYC	2 cut(s)	897, 1140
Hsp92II	CATG	7 cut(s)	302, 458, 547, 717, 931, 1174, 1393
HspAI	GCGC	4 cut(s)	897, 1074, 1302, 1322
KasI	GGCGCC	1 cut(s)	896
KflI	GGGWCCC	1 cut(s)	33
Kpn2I	TCCGGA	2 cut(s)	159, 887
KroI	GCCGGC	1 cut(s)	965
KroNI	GCCGGC	1 cut(s)	967
Ksp22I	TGATCA	1 cut(s)	1476
Kzo9I	GATC	5 cut(s)	13, 184, 433, 1476, 1496
LmnI	GCTCC	1 cut(s)	1055
Lsp1109I	GCAGC	7 cut(s)	66, 78, 256, 490, 831, 986, 1322
LweI	GCATC	5 cut(s)	352, 490, 515, 845, 1426
MaeI	CTAG	2 cut(s)	492, 821
MaeII	ACGT	3 cut(s)	105, 1140, 1164
MaeIII	GTNAC	7 cut(s)	294, 1019, 1084, 1117, 1157, 1222, 1261
MalI	GATC	5 cut(s)	15, 186, 435, 1478, 1498
MboI	GATC	5 cut(s)	13, 184, 433, 1476, 1496
MboII	GAAGA	5 cut(s)	139, 251, 488, 605, 608
MfeI	CAATTG	1 cut(s)	381
MflI	RGATCY	2 cut(s)	13, 433
MhlI	GDGCHC	1 cut(s)	60
MlsI	TGGCCA	1 cut(s)	874
MluCI	AATT	3 cut(s)	153, 381, 625
MluNI	TGGCCA	1 cut(s)	874
Mly113I	GGCGCC	1 cut(s)	897
MlyI	GAGTC	3 cut(s)	497, 795, 1369
MmeI	TCCRAC	3 cut(s)	775, 1397, 1446
Mox20I	TGGCCA	1 cut(s)	874
Mph1103I	ATGCAT	1 cut(s)	424
MroI	TCCGGA	2 cut(s)	159, 887
MroNI	GCCGGC	1 cut(s)	965
MroXI	GAANNNNTTC	1 cut(s)	153
MscI	TGGCCA	1 cut(s)	874
MseI	TTAA	4 cut(s)	48, 173, 693, 777
MslI	CAYNNNNRTG	1 cut(s)	453
Msp20I	TGGCCA	1 cut(s)	874
MspR9I	CCNGG	5 cut(s)	485, 876, 936, 962, 1462
MunI	CAATTG	1 cut(s)	381
MvaI	CCWGG	1 cut(s)	876
MvnI	CGCG	2 cut(s)	1304, 1322
MwoI	GCNNNNNNNGC	8 cut(s)	255, 725, 975, 1068, 1255, 1310, 1319, 1341
NaeI	GCCGGC	1 cut(s)	967
NarI	GGCGCC	1 cut(s)	897
NciI	CCSGG	4 cut(s)	485, 936, 962, 1462
NdeII	GATC	5 cut(s)	13, 184, 433, 1476, 1496
NgoMIV	GCCGGC	1 cut(s)	965
NlaIII	CATG	7 cut(s)	302, 458, 547, 717, 931, 1174, 1393
NlaIV	GGNNCC	6 cut(s)	34, 35, 101, 759, 898, 1051
NmeAIII	GCCGAG	1 cut(s)	888
NmuCI	GTSAC	4 cut(s)	294, 1084, 1222, 1261
NsiI	ATGCAT	1 cut(s)	424
NspI	RCATGY	2 cut(s)	302, 547
PaeR7I	CTCGAG	2 cut(s)	189, 564
PciI	ACATGT	1 cut(s)	298
PcsI	WCGNNNNNNNCGW	4 cut(s)	1113, 1146, 1161, 1218
PdiI	GCCGGC	1 cut(s)	967
PdmI	GAANNNNTTC	1 cut(s)	153
PfeI	GAWTC	2 cut(s)	394, 1268
PflMI	CCANNNNNTGG	1 cut(s)	109
PfoI	TCCNGGA	1 cut(s)	483
PinAI	ACCGGT	1 cut(s)	754
PleI	GAGTC	3 cut(s)	496, 795, 1369
PluTI	GGCGCC	1 cut(s)	900
PpsI	GAGTC	3 cut(s)	496, 795, 1369
PpuMI	RGGWCCY	1 cut(s)	33
PscI	ACATGT	1 cut(s)	298
Psp5II	RGGWCCY	1 cut(s)	33
Psp6I	CCWGG	1 cut(s)	874
PspFI	CCCAGC	1 cut(s)	1214
PspGI	CCWGG	1 cut(s)	874
PspN4I	GGNNCC	6 cut(s)	34, 35, 101, 759, 898, 1051
PspPI	GGNCC	4 cut(s)	33, 972, 987, 1182
PspPPI	RGGWCCY	1 cut(s)	33
PspXI	VCTCGAGB	1 cut(s)	564
PstNI	CAGNNNCTG	1 cut(s)	503
PsuI	RGATCY	2 cut(s)	13, 433
RsaI	GTAC	6 cut(s)	5, 447, 1211, 1382, 1453, 1459
RsaNI	GTAC	6 cut(s)	4, 446, 1210, 1381, 1452, 1458
RseI	CAYNNNNRTG	1 cut(s)	453
SalI	GTCGAC	1 cut(s)	1151
SaqAI	TTAA	4 cut(s)	48, 173, 693, 777
Sau3AI	GATC	5 cut(s)	13, 184, 433, 1476, 1496
Sau96I	GGNCC	4 cut(s)	33, 972, 987, 1182
ScaI	AGTACT	1 cut(s)	1382
SchI	GAGTC	3 cut(s)	497, 795, 1369
ScrFI	CCNGG	5 cut(s)	485, 876, 936, 962, 1462
SduI	GDGCHC	1 cut(s)	60
SfaNI	GCATC	5 cut(s)	352, 490, 515, 845, 1426
SfoI	GGCGCC	1 cut(s)	898
Sfr274I	CTCGAG	2 cut(s)	189, 564
SgrAI	CRCCGGYG	2 cut(s)	1064, 1340
SgrDI	CGTCGACG	1 cut(s)	1151
SinI	GGWCC	2 cut(s)	33, 972
SlaI	CTCGAG	2 cut(s)	189, 564
SmiMI	CAYNNNNRTG	1 cut(s)	453
SmlI	CTYRAG	4 cut(s)	59, 189, 533, 564
SmoI	CTYRAG	4 cut(s)	59, 189, 533, 564
Sse9I	AATT	3 cut(s)	153, 381, 625
SspDI	GGCGCC	1 cut(s)	896
SspMI	CTAG	2 cut(s)	492, 821
StyD4I	CCNGG	5 cut(s)	483, 874, 934, 960, 1460
StyI	CCWWGG	2 cut(s)	311, 1089
TaaI	ACNGT	4 cut(s)	652, 835, 868, 1157
TaiI	ACGT	3 cut(s)	108, 1143, 1167
TaqI	TCGA	5 cut(s)	190, 565, 1008, 1112, 1152
TaqII	GACCGA	1 cut(s)	673
TasI	AATT	3 cut(s)	153, 381, 625
TatI	WGTACW	3 cut(s)	3, 445, 1380
TauI	GCSGC	5 cut(s)	902, 981, 1050, 1071, 1074
TfiI	GAWTC	2 cut(s)	394, 1268
Tru1I	TTAA	4 cut(s)	48, 173, 693, 777
Tru9I	TTAA	4 cut(s)	48, 173, 693, 777
TscAI	CASTG	1 cut(s)	657
TseFI	GTSAC	4 cut(s)	294, 1084, 1222, 1261
TseI	GCWGC	7 cut(s)	66, 79, 269, 503, 844, 999, 1335
Tsp45I	GTSAC	4 cut(s)	294, 1084, 1222, 1261
TspDTI	ATGAA	7 cut(s)	89, 106, 162, 252, 443, 597, 669
TspGWI	ACGGA	3 cut(s)	1038, 1241, 1280
TspRI	CASTG	1 cut(s)	657
Van91I	CCANNNNNTGG	1 cut(s)	109
VpaK11BI	GGWCC	2 cut(s)	33, 972
XagI	CCTNNNNNAGG	1 cut(s)	582
XapI	RAATTY	1 cut(s)	625
XceI	RCATGY	2 cut(s)	302, 547
XhoI	CTCGAG	2 cut(s)	189, 564
XmiI	GTMKAC	1 cut(s)	1152
XmnI	GAANNNNTTC	1 cut(s)	153
XspI	CTAG	2 cut(s)	492, 821
ZraI	GACGTC	1 cut(s)	1141
ZrmI	AGTACT	1 cut(s)	1382
Zsp2I	ATGCAT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.