Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008281

Physical Location & Seq

Genomic Coordinates Reverse (-)

34464241 .. 34466732

Gene Structure 2492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G383800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGAGCTGCATTGAGGGAGGTTTTTCCTGGAACGAGATGGATGTTTGCAGTCCCTTGAAACCTGATAGTAAACTGAAGCACAGGCCCTTAACTCCACTTAGAGTTGTGAGGGGTGTGATATGTTTAGTAGTGTTTCTTTCTACTGCTTTCATGATTCTTGTGTGCTTTGCGCCTATCATTGCTGTAATTTTGCGCCTGTTGAGCATACATTGCAGCAGAAAAGCAATATCCCTCCTCTTTGGTATTTGGCTGGCCTTGTGGCCCTTCCTATTTGAAAAGATCAATGGGACCAAAGTGGTTTTTACTGGTGACACCGTGCCCCCGAAAGAACGCACTCTGCTCATTGCCAATCATAAAACTGAGGTTGATTGGATGTACTTGTGGGATCTTGCATTGCGAAAAGGGTCCCTCGGCCACATCAAATATGTCCTCAAGAGCAGCCTCATGAAGCTGCCTGTCTTCGGTTGGGGCTTTCATGTTTTGGAGTTTATCCCTTTGAAGAGGAAGTGGGAAGTTGATGAACCAGTTATGCGCAAATTGCTTTCGTCCTTTGCGGATCCTGCAGACCCTCTGTGGCTCGCCATTTTTCCTGAAGGAACTGATTATAATGAAGAAAAATGCAAAAAGAGTCAGATATTTGCTGCTGAAACTGGACTTCCTGTGCTGTCACATGTCCTGCTTCCAAGAACGAAAGGTTTTTGTGCTTGCTTGGAAGCTCTAAGAAGTTCTTTGGATGCAGTTTATGACTTGACAATCGCATACAAGAATCAATGCCCTTCATTTATGGACAATGCGTTTGGCGTGGATCCTTCAGAAGTTCACATTCATGTTCGCCGTATCCCTATCGAAGACATCCCAGAGTCTATAGCGGATGCAGCTTCTTGGTTAACGGACACATTCCAGCTCAAGGACAACTTACTTTCTGATTTCAATACTCAAGGCCATTTCCCTAGTGAAGGAGGAGGAGGAGGAGGAGGAGGAGGCGAAGAGGAACTGTCCACATTGAAGTGCTTGGTAAATTTTATGTTGGTAGTTGTTTTGACTGTCGTGCTCGTTTACCTTACCATTTTTTCAACCGTCTGGTTTAAAATATACATCGGTTTATCATGTGCATACCTTGCTACAGCTACTTATTTTGAAATCCAACCGATGCCAATTTTAGACTTTGTTAAAGCAACTTGTGTTTGCAATAGACCAAGAAGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransf_C Acyltransferase

Protein Analysis

403

Amino Acids

45.05

Weight (kDa)

6.52

Isoelectric Point (pI)

46.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75020 AT1G75020
fragaria_vesca	FvH4_2g40310 FvH4_2g40310
malus_domestica	MD08G1036500.v1.1
prunus_persica	Prupe.1G383800_v2.0.a1 Prupe.1G383800_v2.0.a1 Prupe.1G383800_v2.0.a1 Prupe.1G383800_v2.0.a1
pyrus_communis	pycom08g02920 pycom15g02850
rosa_chinensis	RchiOBHm_Chr6g0300431
rosa_laevigata	RLG00000011338
rosa_multiflora	Rmu_co8264011.1_g000001 Rmu_sc0003793.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167790
rosa_rugosa	Rorug06G0295900 Rorug06G0296000
rosa_samantha	Rh6AG408700 Rh6BG415900 Rh6CG423400 Rh6DG409000
rosa_wichuraiana	Rw6G035750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	606
Acc16I	TGCGCA	1 cut(s)	533
AciI	CCGC	2 cut(s)	554, 869
AclWI	GGATC	5 cut(s)	393, 551, 564, 800, 813
AcoI	YGGCCR	1 cut(s)	412
AcsI	RAATTY	1 cut(s)	1018
AcuI	CTGAAG	3 cut(s)	95, 612, 795
AfaI	GTAC	1 cut(s)	377
AfiI	CCNNNNNNNGG	3 cut(s)	461, 907, 956
AflIII	ACRYGT	1 cut(s)	670
AgsI	TTSAA	7 cut(s)	58, 275, 499, 931, 1006, 1074, 1139
AjnI	CCWGG	1 cut(s)	26
AluBI	AGCT	6 cut(s)	6, 451, 716, 878, 904, 1127
AluI	AGCT	6 cut(s)	6, 451, 716, 878, 904, 1127
Alw21I	GWGCWC	1 cut(s)	1053
AlwI	GGATC	5 cut(s)	393, 551, 564, 800, 813
AoxI	GGCC	5 cut(s)	83, 252, 260, 412, 940
ApeKI	GCWGC	6 cut(s)	6, 213, 438, 451, 641, 875
ApoI	RAATTY	1 cut(s)	1018
ArsI	GACNNNNNNTTYG	2 cut(s)	779, 811
AspLEI	GCGC	3 cut(s)	172, 195, 534
AspS9I	GGNCC	4 cut(s)	84, 261, 288, 405
AsuHPI	GGTGA	1 cut(s)	320
AvaII	GGWCC	2 cut(s)	288, 405
BaeGI	GKGCMC	1 cut(s)	321
BamHI	GGATCC	2 cut(s)	556, 805
BbsI	GAAGAC	2 cut(s)	451, 855
Bbv12I	GWGCWC	1 cut(s)	1053
BbvI	GCAGC	5 cut(s)	225, 438, 450, 628, 887
BccI	CCATC	1 cut(s)	31
BceAI	ACGGC	1 cut(s)	819
BciT130I	CCWGG	1 cut(s)	28
BciVI	GTATCC	1 cut(s)	848
BfaI	CTAG	1 cut(s)	951
BfmI	CTRYAG	3 cut(s)	561, 864, 1122
BfuI	GTATCC	1 cut(s)	848
BisI	GCNGC	6 cut(s)	7, 214, 439, 452, 642, 876
BlsI	GCNGC	6 cut(s)	8, 215, 440, 453, 643, 877
Bme1390I	CCNGG	1 cut(s)	28
Bme18I	GGWCC	2 cut(s)	288, 405
BmgT120I	GGNCC	4 cut(s)	84, 261, 288, 405
BmiI	GGNNCC	5 cut(s)	289, 406, 407, 558, 807
BmrFI	CCNGG	1 cut(s)	28
BmsI	GCATC	3 cut(s)	724, 862, 1140
BpiI	GAAGAC	2 cut(s)	451, 855
BpuEI	CTTGAG	3 cut(s)	416, 890, 921
BsaJI	CCNNGG	1 cut(s)	409
Bsc4I	CCNNNNNNNGG	3 cut(s)	461, 907, 956
Bse1I	ACTGG	3 cut(s)	310, 524, 655
Bse3DI	GCAATG	4 cut(s)	177, 208, 342, 392
BseBI	CCWGG	1 cut(s)	28
BseDI	CCNNGG	1 cut(s)	409
BseGI	GGATG	5 cut(s)	46, 378, 739, 852, 877
BseLI	CCNNNNNNNGG	3 cut(s)	461, 907, 956
BseMI	GCAATG	4 cut(s)	177, 208, 342, 392
BseMII	CTCAG	1 cut(s)	351
BseNI	ACTGG	3 cut(s)	310, 524, 655
BseRI	GAGGAG	8 cut(s)	224, 975, 978, 981, 984, 987, 990, 993
BseSI	GKGCMC	1 cut(s)	321
BseXI	GCAGC	5 cut(s)	225, 438, 450, 628, 887
BshFI	GGCC	5 cut(s)	85, 254, 262, 414, 942
BsiHKAI	GWGCWC	1 cut(s)	1053
BslFI	GGGAC	3 cut(s)	36, 301, 391
BslI	CCNNNNNNNGG	3 cut(s)	461, 907, 956
BsmFI	GGGAC	3 cut(s)	36, 301, 391
BsnI	GGCC	5 cut(s)	85, 254, 262, 414, 942
Bsp1286I	GDGCHC	2 cut(s)	321, 1053
Bsp143I	GATC	4 cut(s)	279, 385, 556, 805
BspACI	CCGC	2 cut(s)	554, 869
BspANI	GGCC	5 cut(s)	85, 254, 262, 414, 942
BspCNI	CTCAG	1 cut(s)	352
BspHI	TCATGA	2 cut(s)	150, 444
BspLI	GGNNCC	5 cut(s)	289, 406, 407, 558, 807
BspMAI	CTGCAG	1 cut(s)	565
BspPI	GGATC	5 cut(s)	393, 551, 564, 800, 813
BsrDI	GCAATG	4 cut(s)	177, 208, 342, 392
BsrI	ACTGG	3 cut(s)	310, 524, 655
BssECI	CCNNGG	1 cut(s)	409
BssMI	GATC	4 cut(s)	279, 385, 556, 805
Bst2UI	CCWGG	1 cut(s)	28
Bst4CI	ACNGT	4 cut(s)	316, 996, 1045, 1078
Bst6I	CTCTTC	2 cut(s)	494, 981
BstAPI	GCANNNNNTGC	2 cut(s)	210, 1118
BstC8I	GCNNGC	3 cut(s)	252, 579, 706
BstDEI	CTNAG	3 cut(s)	98, 360, 719
BstENI	CCTNNNNNAGG	1 cut(s)	954
BstF5I	GGATG	5 cut(s)	46, 378, 739, 852, 877
BstHHI	GCGC	3 cut(s)	172, 195, 534
BstKTI	GATC	4 cut(s)	282, 388, 559, 808
BstMBI	GATC	4 cut(s)	279, 385, 556, 805
BstMWI	GCNNNNNNNGC	6 cut(s)	201, 210, 538, 560, 875, 1118
BstNI	CCWGG	1 cut(s)	28
BstNSI	RCATGY	1 cut(s)	674
BstSCI	CCNGG	1 cut(s)	26
BstSFI	CTRYAG	3 cut(s)	561, 864, 1122
BstSLI	GKGCMC	1 cut(s)	321
BstV1I	GCAGC	5 cut(s)	225, 438, 450, 628, 887
BstV2I	GAAGAC	2 cut(s)	451, 855
BstX2I	RGATCY	3 cut(s)	385, 556, 805
BstYI	RGATCY	3 cut(s)	385, 556, 805
BsuI	GTATCC	1 cut(s)	848
BsuRI	GGCC	5 cut(s)	85, 254, 262, 414, 942
BtsCI	GGATG	5 cut(s)	46, 378, 739, 852, 877
Cac8I	GCNNGC	3 cut(s)	252, 579, 706
CciI	TCATGA	2 cut(s)	150, 444
CfoI	GCGC	3 cut(s)	172, 195, 534
Cfr13I	GGNCC	4 cut(s)	84, 261, 288, 405
Csp6I	GTAC	1 cut(s)	376
CviAII	CATG	6 cut(s)	151, 445, 476, 671, 827, 1107
CviQI	GTAC	1 cut(s)	376
DdeI	CTNAG	3 cut(s)	98, 360, 719
DpnI	GATC	4 cut(s)	281, 387, 558, 807
DpnII	GATC	4 cut(s)	279, 385, 556, 805
DraI	TTTAAA	1 cut(s)	1087
EaeI	YGGCCR	1 cut(s)	412
Eam1104I	CTCTTC	2 cut(s)	494, 981
EarI	CTCTTC	2 cut(s)	494, 981
Eco47I	GGWCC	2 cut(s)	288, 405
Eco57I	CTGAAG	3 cut(s)	95, 612, 795
EcoNI	CCTNNNNNAGG	1 cut(s)	954
EcoO109I	RGGNCCY	2 cut(s)	84, 405
EcoRII	CCWGG	1 cut(s)	26
FaeI	CATG	6 cut(s)	154, 448, 479, 674, 830, 1110
FalI	AAGNNNNNCTT	4 cut(s)	712, 744, 899, 931
FaqI	GGGAC	3 cut(s)	36, 301, 391
FatI	CATG	6 cut(s)	150, 444, 475, 670, 826, 1106
Fnu4HI	GCNGC	6 cut(s)	7, 214, 439, 452, 642, 876
FokI	GGATG	5 cut(s)	53, 385, 746, 839, 884
Fsp4HI	GCNGC	6 cut(s)	7, 214, 439, 452, 642, 876
FspBI	CTAG	1 cut(s)	951
FspI	TGCGCA	1 cut(s)	533
GlaI	GCGC	3 cut(s)	171, 194, 533
GluI	GCNGC	6 cut(s)	7, 214, 439, 452, 642, 876
HaeIII	GGCC	5 cut(s)	85, 254, 262, 414, 942
HhaI	GCGC	3 cut(s)	172, 195, 534
Hin1II	CATG	6 cut(s)	154, 448, 479, 674, 830, 1110
Hin6I	GCGC	3 cut(s)	170, 193, 532
HinP1I	GCGC	3 cut(s)	170, 193, 532
HincII	GTYRAC	1 cut(s)	888
HindII	GTYRAC	1 cut(s)	888
HinfI	GANTC	4 cut(s)	154, 628, 766, 860
HpaI	GTTAAC	1 cut(s)	888
HphI	GGTGA	1 cut(s)	320
Hpy166II	GTNNAC	5 cut(s)	71, 820, 888, 999, 1057
Hpy188I	TCNGA	3 cut(s)	633, 814, 925
Hpy188III	TCNNGA	4 cut(s)	151, 433, 445, 590
Hpy8I	GTNNAC	5 cut(s)	71, 820, 888, 999, 1057
HpyAV	CCTTC	5 cut(s)	274, 587, 786, 819, 950
HpyCH4III	ACNGT	4 cut(s)	316, 996, 1045, 1078
HpyF10VI	GCNNNNNNNGC	6 cut(s)	201, 210, 538, 560, 875, 1118
HpyF3I	CTNAG	3 cut(s)	98, 360, 719
Hsp92II	CATG	6 cut(s)	154, 448, 479, 674, 830, 1110
HspAI	GCGC	3 cut(s)	170, 193, 532
KflI	GGGWCCC	1 cut(s)	405
KspAI	GTTAAC	1 cut(s)	888
Kzo9I	GATC	4 cut(s)	279, 385, 556, 805
Lsp1109I	GCAGC	5 cut(s)	225, 438, 450, 628, 887
LweI	GCATC	3 cut(s)	724, 862, 1140
MaeI	CTAG	1 cut(s)	951
MaeIII	GTNAC	2 cut(s)	308, 666
MalI	GATC	4 cut(s)	281, 387, 558, 807
MboI	GATC	4 cut(s)	279, 385, 556, 805
MboII	GAAGA	5 cut(s)	451, 511, 623, 860, 998
MflI	RGATCY	3 cut(s)	385, 556, 805
MhlI	GDGCHC	2 cut(s)	321, 1053
MluCI	AATT	4 cut(s)	186, 536, 1018, 1155
MlyI	GAGTC	2 cut(s)	637, 869
MmeI	TCCRAC	1 cut(s)	1168
MseI	TTAA	4 cut(s)	89, 887, 1086, 1170
MslI	CAYNNNNRTG	2 cut(s)	825, 1006
MspR9I	CCNGG	1 cut(s)	28
MvaI	CCWGG	1 cut(s)	28
MwoI	GCNNNNNNNGC	6 cut(s)	201, 210, 538, 560, 875, 1118
NdeII	GATC	4 cut(s)	279, 385, 556, 805
NlaIII	CATG	6 cut(s)	154, 448, 479, 674, 830, 1110
NlaIV	GGNNCC	5 cut(s)	289, 406, 407, 558, 807
NmeAIII	GCCGAG	1 cut(s)	390
NmuCI	GTSAC	2 cut(s)	308, 666
NsbI	TGCGCA	1 cut(s)	533
NspI	RCATGY	1 cut(s)	674
PagI	TCATGA	2 cut(s)	150, 444
PciI	ACATGT	1 cut(s)	670
PfeI	GAWTC	2 cut(s)	154, 766
PfoI	TCCNGGA	1 cut(s)	26
PkrI	GCNGC	6 cut(s)	8, 215, 440, 453, 643, 877
PleI	GAGTC	2 cut(s)	636, 868
PpsI	GAGTC	2 cut(s)	636, 868
PpuMI	RGGWCCY	1 cut(s)	405
PscI	ACATGT	1 cut(s)	670
PsiI	TTATAA	1 cut(s)	606
Psp5II	RGGWCCY	1 cut(s)	405
Psp6I	CCWGG	1 cut(s)	26
PspGI	CCWGG	1 cut(s)	26
PspN4I	GGNNCC	5 cut(s)	289, 406, 407, 558, 807
PspPI	GGNCC	4 cut(s)	84, 261, 288, 405
PspPPI	RGGWCCY	1 cut(s)	405
PstI	CTGCAG	1 cut(s)	565
PsuI	RGATCY	3 cut(s)	385, 556, 805
RsaI	GTAC	1 cut(s)	377
RsaNI	GTAC	1 cut(s)	376
RseI	CAYNNNNRTG	2 cut(s)	825, 1006
SaqAI	TTAA	4 cut(s)	89, 887, 1086, 1170
SatI	GCNGC	6 cut(s)	7, 214, 439, 452, 642, 876
Sau3AI	GATC	4 cut(s)	279, 385, 556, 805
Sau96I	GGNCC	4 cut(s)	84, 261, 288, 405
SchI	GAGTC	2 cut(s)	637, 869
ScrFI	CCNGG	1 cut(s)	28
SduI	GDGCHC	2 cut(s)	321, 1053
SfaNI	GCATC	3 cut(s)	724, 862, 1140
SfcI	CTRYAG	3 cut(s)	561, 864, 1122
SinI	GGWCC	2 cut(s)	288, 405
SmiMI	CAYNNNNRTG	2 cut(s)	825, 1006
SmlI	CTYRAG	3 cut(s)	431, 905, 936
SmoI	CTYRAG	3 cut(s)	431, 905, 936
Sse9I	AATT	4 cut(s)	186, 536, 1018, 1155
SsiI	CCGC	2 cut(s)	554, 869
SspMI	CTAG	1 cut(s)	951
StyD4I	CCNGG	1 cut(s)	26
TaaI	ACNGT	4 cut(s)	316, 996, 1045, 1078
TaqI	TCGA	1 cut(s)	846
TasI	AATT	4 cut(s)	186, 536, 1018, 1155
TatI	WGTACW	1 cut(s)	375
TfiI	GAWTC	2 cut(s)	154, 766
Tru1I	TTAA	4 cut(s)	89, 887, 1086, 1170
Tru9I	TTAA	4 cut(s)	89, 887, 1086, 1170
TseFI	GTSAC	2 cut(s)	308, 666
TseI	GCWGC	6 cut(s)	6, 213, 438, 451, 641, 875
Tsp45I	GTSAC	2 cut(s)	308, 666
TspDTI	ATGAA	7 cut(s)	139, 461, 464, 534, 624, 768, 815
TspGWI	ACGGA	1 cut(s)	905
VpaK11BI	GGWCC	2 cut(s)	288, 405
XagI	CCTNNNNNAGG	1 cut(s)	954
XapI	RAATTY	1 cut(s)	1018
XceI	RCATGY	1 cut(s)	674
XspI	CTAG	1 cut(s)	951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.