AT1G77620
ERF Family

superfamily. Protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006838
Physical Location & Seq
Reverse (-)
29167764 .. 29173032
5269 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G77620.1

Sequence Viewer

Length: 3456 bp
ATGGATCAGACTCCACGGCGGAATGTTCGTCGGAAATTGGTTCAGTCGTCTTTGCTCCCCCATAAACCGGAGGATGTAATTGACTCTAATGGAGATCCGATGTGCGATGAAGGAGGAGAAGTAGGAGATGGTCGTAGTCAAGGGAAGAAGACGAGAAAACAGAAAGAGAGAACTCCGAAGAACGGAGCTACCAAGAAGGTGGCTAAAGGAAAGAGTCCTCGAAAAACAACTCCTAAGAAATGTGCAACTAAAAACGGAATTGTAGCTGCTGGTGATCAGATGATTGCTGCCAATGTTTCACCTCCAGTTCCCAATTTGCGCCTGGAAGCTAAGTTAAGAGCTGAGGAAAATTCGCGGATGTCTGCTGGGAAGCAAATACATCCGTTTTTCTCGACTTGGAAAGGAGGTAAAAGAAATCAAGAAGCTGTTGCAGCAGAGAATGGTACGTGTCTTGGTCGAGGGAGAGATAAAATCGTCACCATTGGCCCTATCCATGTATTTGACAAGTTTCAGGATGATTATCCAACCACCCTTGATTGGAAGAACTGGACTTTCTATGAGCAAACATCTACTACTGAGAGTCCTGATCAACAAATAAAATTTAACTCTCTTGAACCTCGGCCCAAGGAGTTTGATTTAAATGAATTGCCATCTCTTTCACATCCTGACGTGTGTGTCATCGATGATGAGGAGCCTGAACAATGCACTAGTCAATCAGAAGGTATTGCAGAGGCATCTTCGGTAGTCTTAATAGAAGACCAGGAGGAGAAACGTGGGTGCCTCGGCTTCTTAGATGGAGCAGAATCGGATTGTGAAGTTCATGAAGCAATTAACTTGTCTGATGATGCTGGTGGTGAAGCCAATATTTCTCATGAAATGCAACACCTGTCATGTCGAGAAAGTAATGACTCCAGTGGCCAACCTTGTAATCGATTATGGGTAGATAAGTACCAGCCAAGAAGTGCCTCGGAGGTATGTGGTAATACTGAATCTGTAAAGGTAATGAATGAATGGCTGCGCCAATGGTATGAGAGAGGGTTTCAGCCAAACAAAGACTTTTTGAGTAGTGATGAAGATAAATCGCAAGATGCTGATTACAACTGTTCTGAAAGTGACTCTGACTCAGAAAAAAGTGGTGCTGAAGATAGCCAGAAGAATGTTCTCTTAATTGTTGGTCCAGCTGGGAGTGGGAAATCTGCAGCCATTCATGCATGCGCCAAGGAACAAGGATTTAAAATCCTAGAGTCCAATACATCAGAATGCCGAAGTGGAACAGTAGTTAGGCAGAAATTTGGGGAGGCTCTCAAGTCATATAGCCTGTCAAGGTCCTTGGACCCTCTTTTCAATTCCTGTACTGATGGCAATGGGGTAGAGGATGTAGTTGAAGTGATGCCCGTATTACATATCCAGAATGATGGAGCTAACTTGAAGCCTTTAATTCTTTTCGAAGATGTAGATATTTGCTTTGCTGAAGATCGTGGTCTCGTTTCTGCTATCCAGCAGATTGCTGTGAAAGCAAAAGGGCCTGTGGTATTGACTGCCAATGACAAGAATCATGGGTTACCAGACAACTTAGAGAGGATAGAAATATACTTTTCATTGCCATCAAAAGAAGAACTGTTTAACCACCTTTCTCTGGTTTGTGCAGCAGAGGAAGTTAAAGTTAATCATGGTTCACTAGAGGAAATGACCACGTTTTGTGGTGGAGATATACGGAAAGCAATTATGCAATTGCAGTTTTGGTTTCAGAGTAAACCGAAAAGAGCCAGAAAGGTGAAGAATACAGGTAATCAAGATCTCTTTGATCATGAAGCTGGCCACTTGCTGCTTCCCAAGATAATTGCACGGGATTTCCCTTCTCAATTATCTCAGTTGGTGGAGAATGAGATTGCTAAGGTATTATCTATGGAAGAGGAAAGAAATAACACAGTGGAAGTATTTGTTGAAGAGGTTGAAAACGAAAAAATGCTTAATAGATTATGGAGGCGTGGCACAGGAAAGAACAGTATACAAGCCAAGAAAGCAGCGATGTTCAGGCAGAACACTACTTTTGAAGATTATGACGAATTAGAAGACGTCTTAAGGATTCCGTGTGAACTTAGCAACACTTCCTACCAACCACTCTCTTTCTCTCAGCCAAACAGAAGGCGGAAGCTCAATGTTGTGATGTCCTCTGATTCAGAAGATGAGCCTCTGACTGACATACGGGTTTCCATTTCTCAACATCAGAAGGACGACAGATTGATTTTCCAAGAAGATGGTACGTTGTCCTCATATTGGCCAGATATGCAAAAGGAAACAAACCCATTAGCTGATCCTTCTAGAGCAGAAATATTGGAGGCAGCTTGTTATCAGTATGAGACATCAAAATTCTCTTACATTAATGAGGTGTCCCAGTCAGTTGAAATATCATGTGTACCAGAGTCTTCATATGTTCCAGAAACTTTAATGGATGGTGAAGCTGAGCTGTCGCCAAGAGCAGTATCTTGCGGACATTTTGATGGAAGAGTAGAGGTTTCAATGAATGAGGACGTTGTACAGACTCCCCCATCAAAAGAGATATACATAGACAGATTCCAGATTTTTGATTGTTTAAAGAATACAAGTGAGATCATTGCAGAATCTTCTGATGCGACAGTGATGGAAGACTGTTTCAAGGAATATGTAGGGGCTGCCCAGAAGATGCAACAAGTTTCAGATGAATGTAGCCGTATGGATTTTGGTAAGACATACAAGACGGCTGAGAAACCAAAGCTAGATACCTCTAGATCTGCGGTGCAAGAATCATGGGAAAAAATCTGTTCCAATCTTGCTGATTTCAAGCCATACTTGGATTCAGAACCTGTAGAAGCTCCACAAGTTCTTGATCTCACTCATCAGATAACCAATCTAATTTCAGAAGCTGACCTAACACATTCCAGATGCCTGAACCTTGGAGCTTTGGAGCCAATGATGAACACTTCAGGAGATCTTGATACGTCTGGTTTATCTCAGATGCTTGAAGAGATGACTTCCACCGTGTCACAGCAAGAATTTTGCTTTTTGACAAACCAAATTACGACAACGGGATCCGTTCCTACTTCATCAGCCACCATGGTACCAGAAAGAGGATTAACAGTAGACGAGGCAAGGCAGGATTACACATCGAGCAATGGAAGCTGCTTGGATATGAAACCAGATATACTTGAAGACTTACTAAAATGTAGGCGAATGACACGGCTTTCCGGTGTCTTAGAGTCAGTAGTCCCTCTGAGATCATTGAAAGGAAGAGCTTTCCATGAATATGCTTCATTCATAGGGCAGATTTCAAGAGCAGATCCCTCTAACTTATCCGGAGCCTTGGAGAAAGGCAGACGGCGAAGGCCAAGAGAAGCTCGACATTACCTGTCAATGGAACTATCCTCCGAAGATATTGCATTATTGGGCCAACACAGCACATACAATAGAAATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0001775 GO:0002200 GO:0002204 GO:0002208 GO:0002250 GO:0002252 GO:0002263 GO:0002285 GO:0002312 GO:0002366 GO:0002376 GO:0002377 GO:0002381 GO:0002440 GO:0002443 GO:0002449 GO:0002460 GO:0002520 GO:0002562 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006310 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006955 GO:0006974 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0008283 GO:0008284 GO:0008630 GO:0009058 GO:0009059 GO:0009893 GO:0009966 GO:0009968 GO:0009987 GO:0010564 GO:0010604 GO:0010646 GO:0010648 GO:0010941 GO:0012501 GO:0016064 GO:0016444 GO:0016445 GO:0016447 GO:0019219 GO:0019222 GO:0019724 GO:0022402 GO:0023051 GO:0023052 GO:0023057 GO:0030888 GO:0030890 GO:0031323 GO:0031325 GO:0032501 GO:0032502 GO:0032943 GO:0032944 GO:0032946 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0035556 GO:0042100 GO:0042113 GO:0042127 GO:0042770 GO:0042771 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045190 GO:0045191 GO:0045321 GO:0045830 GO:0045911 GO:0045935 GO:0046483 GO:0046649 GO:0046651 GO:0048302 GO:0048304 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048731 GO:0048856 GO:0050670 GO:0050671 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051249 GO:0051251 GO:0051716 GO:0051726 GO:0060255 GO:0060548 GO:0065007 GO:0070661 GO:0070663 GO:0070665 GO:0071704 GO:0072331 GO:0072332 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097190 GO:0097193 GO:1901360 GO:1901576 GO:1901796 GO:1901797 GO:1901987 GO:1901990 GO:1902165 GO:1902166 GO:1902229 GO:1902230 GO:1902253 GO:1902254 GO:1902531 GO:1902532 GO:2000026 GO:2001020 GO:2001021 GO:2001233 GO:2001234 GO:2001242 GO:2001243
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA Rad17

Protein Analysis

1151

Amino Acids

128.66

Weight (kDa)

4.97

Isoelectric Point (pI)

49.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 674
AatII GACGTC 1 cut(s) 2079
Acc65I GGTACC 1 cut(s) 3097
AccB1I GGYRCC 2 cut(s) 777, 3097
AccI GTMKAC 2 cut(s) 2008, 3120
AccII CGCG 1 cut(s) 355
AccIII TCCGGA 1 cut(s) 3332
AciI CCGC 5 cut(s) 19, 355, 2149, 2490, 2774
AclWI GGATC 6 cut(s) 12, 89, 2309, 3063, 3076, 3311
AcoI YGGCCR 3 cut(s) 916, 1816, 2279
AcsI RAATTY 5 cut(s) 349, 599, 1289, 2369, 3032
AcuI CTGAAG 3 cut(s) 1161, 1491, 2946
AcyI GRCGYC 1 cut(s) 2076
AfaI GTAC 7 cut(s) 445, 950, 1354, 2263, 2418, 2538, 3099
AfiI CCNNNNNNNGG 7 cut(s) 67, 182, 537, 1636, 2277, 3107, 3391
AflII CTTAAG 1 cut(s) 2080
AflIII ACRYGT 2 cut(s) 446, 669
AhlI ACTAGT 1 cut(s) 707
AjiI CACGTC 1 cut(s) 670
AjnI CCWGG 2 cut(s) 321, 759
Alw26I GTCTC 2 cut(s) 1487, 2354
AlwI GGATC 6 cut(s) 12, 89, 2309, 3063, 3076, 3311
AlwNI CAGNNNCTG 2 cut(s) 2843, 2903
Aor13HI TCCGGA 1 cut(s) 3332
AoxI GGCC 8 cut(s) 484, 620, 916, 1523, 1816, 2279, 3362, 3424
ApoI RAATTY 5 cut(s) 349, 599, 1289, 2369, 3032
AseI ATTAAT 1 cut(s) 2382
Asp718I GGTACC 1 cut(s) 3097
AspLEI GCGC 3 cut(s) 321, 1020, 1217
AspS9I GGNCC 7 cut(s) 485, 621, 1175, 1326, 1333, 1523, 3424
AsuHPI GGTGA 6 cut(s) 284, 291, 469, 866, 1786, 2468
AsuII TTCGAA 1 cut(s) 1446
AvaII GGWCC 3 cut(s) 1175, 1326, 1333
BaeI ACNNNNGTAYC 2 cut(s) 3081, 3114
BalI TGGCCA 3 cut(s) 918, 1818, 2281
BamHI GGATCC 1 cut(s) 3068
BanI GGYRCC 2 cut(s) 777, 3097
BbsI GAAGAC 6 cut(s) 155, 762, 2079, 2418, 2652, 3195
BbvCI CCTCAGC 1 cut(s) 342
BceAI ACGGC 5 cut(s) 32, 2694, 2754, 3233, 3371
BcgI CGANNNNNNTGC 2 cut(s) 3395, 3429
BciT130I CCWGG 2 cut(s) 323, 761
BclI TGATCA 3 cut(s) 274, 586, 1804
BcoDI GTCTC 2 cut(s) 1487, 2354
BcuI ACTAGT 1 cut(s) 707
BfaI CTAG 6 cut(s) 708, 1241, 1679, 2322, 2756, 2766
BfmI CTRYAG 2 cut(s) 1197, 2844
BfrI CTTAAG 1 cut(s) 2080
BglII AGATCT 3 cut(s) 1795, 2768, 2968
BlpI GCTNAGC 1 cut(s) 2463
Bme1390I CCNGG 2 cut(s) 323, 761
Bme18I GGWCC 3 cut(s) 1175, 1326, 1333
BmgBI CACGTC 1 cut(s) 670
BmgT120I GGNCC 7 cut(s) 485, 621, 1175, 1326, 1333, 1523, 3424
BmiI GGNNCC 7 cut(s) 693, 779, 1335, 2946, 3070, 3099, 3337
BmrFI CCNGG 2 cut(s) 323, 761
BmrI ACTGGG 1 cut(s) 2389
BmsI GCATC 8 cut(s) 743, 835, 1078, 1380, 2620, 2673, 2912, 2985
BmuI ACTGGG 1 cut(s) 2389
BpiI GAAGAC 6 cut(s) 155, 762, 2079, 2418, 2652, 3195
BpmI CTGGAG 2 cut(s) 288, 895
Bpu10I CCTNAGC 2 cut(s) 342, 1893
Bpu1102I GCTNAGC 1 cut(s) 2463
Bpu14I TTCGAA 1 cut(s) 1446
BpuEI CTTGAG 1 cut(s) 1289
Bsa29I ATCGAT 2 cut(s) 681, 931
BsaAI YACGTR 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 519
BsaHI GRCGYC 1 cut(s) 2076
BsaI GGTCTC 1 cut(s) 1487
BsaWI WCCGGW 3 cut(s) 67, 3224, 3332
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 7 cut(s) 67, 182, 537, 1636, 2277, 3107, 3391
Bse1I ACTGG 4 cut(s) 305, 551, 912, 2395
Bse3DI GCAATG 4 cut(s) 1369, 1598, 2613, 3157
Bse8I GATNNNNATC 1 cut(s) 519
BseAI TCCGGA 1 cut(s) 3332
BseBI CCWGG 2 cut(s) 323, 761
BseCI ATCGAT 2 cut(s) 681, 931
BseGI GGATG 7 cut(s) 79, 363, 379, 520, 661, 1381, 2458
BseJI GATNNNNATC 1 cut(s) 519
BseLI CCNNNNNNNGG 7 cut(s) 67, 182, 537, 1636, 2277, 3107, 3391
BseMI GCAATG 4 cut(s) 1369, 1598, 2613, 3157
BseMII CTCAG 9 cut(s) 333, 567, 1137, 1883, 2147, 2454, 2733, 3005, 3242
BseNI ACTGG 4 cut(s) 305, 551, 912, 2395
BseRI GAGGAG 3 cut(s) 129, 704, 779
BseYI CCCAGC 2 cut(s) 365, 1181
BsgI GTGCAG 1 cut(s) 1665
Bsh1236I CGCG 1 cut(s) 355
BshFI GGCC 8 cut(s) 486, 622, 918, 1525, 1818, 2281, 3364, 3426
BshNI GGYRCC 2 cut(s) 777, 3097
BshVI ATCGAT 2 cut(s) 681, 931
BsiSI CCGG 3 cut(s) 68, 3225, 3333
BslFI GGGAC 2 cut(s) 2377, 3230
BslI CCNNNNNNNGG 7 cut(s) 67, 182, 537, 1636, 2277, 3107, 3391
BsmAI GTCTC 2 cut(s) 1487, 2354
BsmFI GGGAC 2 cut(s) 2377, 3230
BsmI GAATGC 1 cut(s) 1265
BsnI GGCC 8 cut(s) 486, 622, 918, 1525, 1818, 2281, 3364, 3426
Bso31I GGTCTC 1 cut(s) 1487
Bsp119I TTCGAA 1 cut(s) 1446
Bsp13I TCCGGA 1 cut(s) 3332
Bsp1407I TGTACA 1 cut(s) 2536
Bsp1720I GCTNAGC 1 cut(s) 2463
Bsp19I CCATGG 1 cut(s) 3093
BspACI CCGC 5 cut(s) 19, 355, 2149, 2490, 2774
BspANI GGCC 8 cut(s) 486, 622, 918, 1525, 1818, 2281, 3364, 3426
BspCNI CTCAG 9 cut(s) 334, 568, 1136, 1882, 2146, 2455, 2734, 3004, 3243
BspDI ATCGAT 2 cut(s) 681, 931
BspEI TCCGGA 1 cut(s) 3332
BspFNI CGCG 1 cut(s) 355
BspHI TCATGA 3 cut(s) 820, 871, 1807
BspLI GGNNCC 7 cut(s) 693, 779, 1335, 2946, 3070, 3099, 3337
BspMAI CTGCAG 1 cut(s) 1201
BspPI GGATC 6 cut(s) 12, 89, 2309, 3063, 3076, 3311
BspQI GCTCTTC 1 cut(s) 3262
BspT104I TTCGAA 1 cut(s) 1446
BspT107I GGYRCC 2 cut(s) 777, 3097
BspTI CTTAAG 1 cut(s) 2080
BspTNI GGTCTC 1 cut(s) 1487
BsrDI GCAATG 4 cut(s) 1369, 1598, 2613, 3157
BsrGI TGTACA 1 cut(s) 2536
BsrI ACTGG 4 cut(s) 305, 551, 912, 2395
BssNAI GTATAC 1 cut(s) 2009
BssNI GRCGYC 1 cut(s) 2076
BssT1I CCWWGG 6 cut(s) 624, 1218, 1329, 2932, 3093, 3339
Bst1107I GTATAC 1 cut(s) 2009
Bst2UI CCWGG 2 cut(s) 323, 761
Bst4CI ACNGT 9 cut(s) 1103, 1276, 1620, 1930, 2006, 2638, 2651, 3019, 3118
Bst6I CTCTTC 5 cut(s) 1905, 1941, 2500, 2997, 3262
BstACI GRCGYC 1 cut(s) 2076
BstAFI CTTAAG 1 cut(s) 2080
BstAUI TGTACA 1 cut(s) 2536
BstBAI YACGTR 1 cut(s) 447
BstBI TTCGAA 1 cut(s) 1446
BstC8I GCNNGC 2 cut(s) 1213, 1816
BstDSI CCRYGG 2 cut(s) 14, 3093
BstEII GGTNACC 1 cut(s) 1560
BstF5I GGATG 7 cut(s) 79, 363, 379, 520, 661, 1381, 2458
BstFNI CGCG 1 cut(s) 355
BstHHI GCGC 3 cut(s) 321, 1020, 1217
BstMAI GTCTC 2 cut(s) 1487, 2354
BstMWI GCNNNNNNNGC 7 cut(s) 431, 1208, 1514, 2021, 2287, 3156, 3432
BstNI CCWGG 2 cut(s) 323, 761
BstNSI RCATGY 1 cut(s) 1215
BstPI GGTNACC 1 cut(s) 1560
BstSCI CCNGG 2 cut(s) 321, 759
BstSFI CTRYAG 2 cut(s) 1197, 2844
BstUI CGCG 1 cut(s) 355
BstV2I GAAGAC 6 cut(s) 155, 762, 2079, 2418, 2652, 3195
BstX2I RGATCY 6 cut(s) 94, 1795, 2768, 2968, 3068, 3316
BstXI CCANNNNNNTGG 3 cut(s) 199, 1415, 2258
BstYI RGATCY 6 cut(s) 94, 1795, 2768, 2968, 3068, 3316
BstZ17I GTATAC 1 cut(s) 2009
Bsu15I ATCGAT 2 cut(s) 681, 931
BsuRI GGCC 8 cut(s) 486, 622, 918, 1525, 1818, 2281, 3364, 3426
BsuTUI ATCGAT 2 cut(s) 681, 931
BtgI CCRYGG 2 cut(s) 14, 3093
BtgZI GCGATG 2 cut(s) 120, 2042
BtrI CACGTC 1 cut(s) 670
BtsCI GGATG 7 cut(s) 79, 363, 379, 520, 661, 1381, 2458
BtsIMutI CAGTG 3 cut(s) 919, 1935, 2643
Cac8I GCNNGC 2 cut(s) 1213, 1816
CaiI CAGNNNCTG 2 cut(s) 2843, 2903
CciI TCATGA 3 cut(s) 820, 871, 1807
CfoI GCGC 3 cut(s) 321, 1020, 1217
Cfr13I GGNCC 7 cut(s) 485, 621, 1175, 1326, 1333, 1523, 3424
ClaI ATCGAT 2 cut(s) 681, 931
Csp6I GTAC 7 cut(s) 444, 949, 1353, 2262, 2417, 2537, 3098
CviQI GTAC 7 cut(s) 444, 949, 1353, 2262, 2417, 2537, 3098
DraI TTTAAA 3 cut(s) 639, 1234, 2595
DrdI GACNNNNNNGTC 1 cut(s) 674
DseDI GACNNNNNNGTC 1 cut(s) 674
EaeI YGGCCR 3 cut(s) 916, 1816, 2279
Eam1104I CTCTTC 5 cut(s) 1905, 1941, 2500, 2997, 3262
EarI CTCTTC 5 cut(s) 1905, 1941, 2500, 2997, 3262
EciI GGCGGA 2 cut(s) 34, 2164
Eco130I CCWWGG 6 cut(s) 624, 1218, 1329, 2932, 3093, 3339
Eco31I GGTCTC 1 cut(s) 1487
Eco47I GGWCC 3 cut(s) 1175, 1326, 1333
Eco57I CTGAAG 3 cut(s) 1161, 1491, 2946
Eco91I GGTNACC 1 cut(s) 1560
EcoO109I RGGNCCY 2 cut(s) 1326, 1523
EcoO65I GGTNACC 1 cut(s) 1560
EcoRII CCWGG 2 cut(s) 321, 759
EcoT14I CCWWGG 6 cut(s) 624, 1218, 1329, 2932, 3093, 3339
EcoT22I ATGCAT 1 cut(s) 1213
ErhI CCWWGG 6 cut(s) 624, 1218, 1329, 2932, 3093, 3339
FalI AAGNNNNNCTT 2 cut(s) 2813, 2845
FaqI GGGAC 2 cut(s) 2377, 3230
FauNDI CATATG 1 cut(s) 2431
FbaI TGATCA 3 cut(s) 274, 586, 1804
FblI GTMKAC 2 cut(s) 2008, 3120
FokI GGATG 7 cut(s) 86, 366, 370, 527, 648, 1388, 2465
FspBI CTAG 6 cut(s) 708, 1241, 1679, 2322, 2756, 2766
GlaI GCGC 3 cut(s) 320, 1019, 1216
GsaI CCCAGC 2 cut(s) 369, 1185
GsuI CTGGAG 2 cut(s) 288, 895
HaeIII GGCC 8 cut(s) 486, 622, 918, 1525, 1818, 2281, 3364, 3426
HapII CCGG 3 cut(s) 68, 3225, 3333
HhaI GCGC 3 cut(s) 321, 1020, 1217
Hin1I GRCGYC 1 cut(s) 2076
Hin6I GCGC 3 cut(s) 319, 1018, 1215
HinP1I GCGC 3 cut(s) 319, 1018, 1215
HpaII CCGG 3 cut(s) 68, 3225, 3333
HphI GGTGA 6 cut(s) 284, 291, 469, 866, 1786, 2468
Hpy166II GTNNAC 6 cut(s) 1676, 1754, 2009, 2096, 2417, 3121
Hpy8I GTNNAC 6 cut(s) 1676, 1754, 2009, 2096, 2417, 3121
Hpy99I CGWCG 1 cut(s) 33
HpyAV CCTTC 8 cut(s) 104, 190, 713, 1866, 2139, 2224, 2328, 3354
HpyCH4III ACNGT 9 cut(s) 1103, 1276, 1620, 1930, 2006, 2638, 2651, 3019, 3118
HpyCH4IV ACGT 8 cut(s) 446, 669, 772, 1694, 2076, 2264, 2532, 2978
HpyF10VI GCNNNNNNNGC 7 cut(s) 431, 1208, 1514, 2021, 2287, 3156, 3432
HpySE526I ACGT 8 cut(s) 446, 669, 772, 1694, 2076, 2264, 2532, 2978
Hsp92I GRCGYC 1 cut(s) 2076
HspAI GCGC 3 cut(s) 319, 1018, 1215
Kpn2I TCCGGA 1 cut(s) 3332
KpnI GGTACC 1 cut(s) 3101
Ksp22I TGATCA 3 cut(s) 274, 586, 1804
LguI GCTCTTC 1 cut(s) 3262
LmnI GCTCC 9 cut(s) 60, 185, 691, 797, 1418, 2857, 2936, 2944, 3335
LweI GCATC 8 cut(s) 743, 835, 1078, 1380, 2620, 2673, 2912, 2985
MaeI CTAG 6 cut(s) 708, 1241, 1679, 2322, 2756, 2766
MaeII ACGT 8 cut(s) 446, 669, 772, 1694, 2076, 2264, 2532, 2978
MaeIII GTNAC 4 cut(s) 475, 1112, 1560, 3021
MfeI CAATTG 1 cut(s) 1730
MflI RGATCY 6 cut(s) 94, 1795, 2768, 2968, 3068, 3316
MlsI TGGCCA 3 cut(s) 918, 1818, 2281
MluNI TGGCCA 3 cut(s) 918, 1818, 2281
MmeI TCCRAC 2 cut(s) 11, 548
Mox20I TGGCCA 3 cut(s) 918, 1818, 2281
Mph1103I ATGCAT 1 cut(s) 1213
MroI TCCGGA 1 cut(s) 3332
MscI TGGCCA 3 cut(s) 918, 1818, 2281
MslI CAYNNNNRTG 3 cut(s) 1258, 2499, 3282
Msp20I TGGCCA 3 cut(s) 918, 1818, 2281
MspA1I CMGCKG 1 cut(s) 1181
MspCI CTTAAG 1 cut(s) 2080
MspI CCGG 3 cut(s) 68, 3225, 3333
MspR9I CCNGG 2 cut(s) 323, 761
MunI CAATTG 1 cut(s) 1730
Mva1269I GAATGC 1 cut(s) 1265
MvaI CCWGG 2 cut(s) 323, 761
MvnI CGCG 1 cut(s) 355
MwoI GCNNNNNNNGC 7 cut(s) 431, 1208, 1514, 2021, 2287, 3156, 3432
NcoI CCATGG 1 cut(s) 3093
NdeI CATATG 1 cut(s) 2431
NlaIV GGNNCC 7 cut(s) 693, 779, 1335, 2946, 3070, 3099, 3337
NmeAIII GCCGAG 2 cut(s) 598, 762
NmuCI GTSAC 3 cut(s) 475, 1112, 3021
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 1 cut(s) 1215
NspV TTCGAA 1 cut(s) 1446
PaeI GCATGC 1 cut(s) 1215
PagI TCATGA 3 cut(s) 820, 871, 1807
PciSI GCTCTTC 1 cut(s) 3262
PctI GAATGC 1 cut(s) 1265
PfeI GAWTC 9 cut(s) 803, 989, 1552, 2086, 2177, 2574, 2621, 2783, 2834
Ppu21I YACGTR 1 cut(s) 447
PpuMI RGGWCCY 1 cut(s) 1326
PshBI ATTAAT 1 cut(s) 2382
Psp5II RGGWCCY 1 cut(s) 1326
Psp6I CCWGG 2 cut(s) 321, 759
PspEI GGTNACC 1 cut(s) 1560
PspFI CCCAGC 2 cut(s) 365, 1181
PspGI CCWGG 2 cut(s) 321, 759
PspN4I GGNNCC 7 cut(s) 693, 779, 1335, 2946, 3070, 3099, 3337
PspPI GGNCC 7 cut(s) 485, 621, 1175, 1326, 1333, 1523, 3424
PspPPI RGGWCCY 1 cut(s) 1326
PstI CTGCAG 1 cut(s) 1201
PstNI CAGNNNCTG 2 cut(s) 2843, 2903
PsuI RGATCY 6 cut(s) 94, 1795, 2768, 2968, 3068, 3316
PvuII CAGCTG 1 cut(s) 1181
RsaI GTAC 7 cut(s) 445, 950, 1354, 2263, 2418, 2538, 3099
RsaNI GTAC 7 cut(s) 444, 949, 1353, 2262, 2417, 2537, 3098
RseI CAYNNNNRTG 3 cut(s) 1258, 2499, 3282
SapI GCTCTTC 1 cut(s) 3262
Sau96I GGNCC 7 cut(s) 485, 621, 1175, 1326, 1333, 1523, 3424
ScrFI CCNGG 2 cut(s) 323, 761
SfaNI GCATC 8 cut(s) 743, 835, 1078, 1380, 2620, 2673, 2912, 2985
SfcI CTRYAG 2 cut(s) 1197, 2844
SfuI TTCGAA 1 cut(s) 1446
SinI GGWCC 3 cut(s) 1175, 1326, 1333
SmiI ATTTAAAT 1 cut(s) 639
SmiMI CAYNNNNRTG 3 cut(s) 1258, 2499, 3282
SmlI CTYRAG 2 cut(s) 1304, 2080
SmoI CTYRAG 2 cut(s) 1304, 2080
SpeI ACTAGT 1 cut(s) 707
SphI GCATGC 1 cut(s) 1215
SsiI CCGC 5 cut(s) 19, 355, 2149, 2490, 2774
SspI AATATT 2 cut(s) 865, 2334
SspMI CTAG 6 cut(s) 708, 1241, 1679, 2322, 2756, 2766
StyD4I CCNGG 2 cut(s) 321, 759
StyI CCWWGG 6 cut(s) 624, 1218, 1329, 2932, 3093, 3339
SwaI ATTTAAAT 1 cut(s) 639
TaaI ACNGT 9 cut(s) 1103, 1276, 1620, 1930, 2006, 2638, 2651, 3019, 3118
TaiI ACGT 8 cut(s) 449, 672, 775, 1697, 2079, 2267, 2535, 2981
TaqI TCGA 9 cut(s) 220, 392, 457, 681, 895, 931, 1446, 3146, 3376
TatI WGTACW 2 cut(s) 1352, 2536
TfiI GAWTC 9 cut(s) 803, 989, 1552, 2086, 2177, 2574, 2621, 2783, 2834
TscAI CASTG 3 cut(s) 919, 1935, 2643
TseFI GTSAC 3 cut(s) 475, 1112, 3021
Tsp45I GTSAC 3 cut(s) 475, 1112, 3021
TspGWI ACGGA 6 cut(s) 198, 270, 372, 1729, 2079, 3061
TspRI CASTG 3 cut(s) 919, 1935, 2643
Vha464I CTTAAG 1 cut(s) 2080
VpaK11BI GGWCC 3 cut(s) 1175, 1326, 1333
VspI ATTAAT 1 cut(s) 2382
XapI RAATTY 5 cut(s) 349, 599, 1289, 2369, 3032
XbaI TCTAGA 2 cut(s) 2321, 2765
XceI RCATGY 1 cut(s) 1215
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XmiI GTMKAC 2 cut(s) 2008, 3120
XspI CTAG 6 cut(s) 708, 1241, 1679, 2322, 2756, 2766
ZraI GACGTC 1 cut(s) 2077
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.