Rmu_sc0006802.1_g000010
ERF Family

superfamily. Protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006802.1
OG0006838
Physical Location & Seq
Reverse (-)
32993 .. 40372
7380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006802.1_g000010.1.cds

Sequence Viewer

Length: 3600 bp
atggacgaatcgccgcagaaatctccggcgacgccgaaacggcggacccggcggagactggtgcagtcgacgctggttcttgtgaagccggcggagccggtggagaacggcgatccgaagaaggagaatagcgaagagaagaacgatcaggatgaggagttctgtgggagtcagagcaagaggaagaggaagccggcggcggccaagaagacgccgccggttaaagctcctaagaagaacggtaagcgatcggcgaatagtacaccgacgaagaagaatggaaaagatgtggtggttgaagatggacctctgataatgcctgatttgagattagaggccaaattgagaagcgaggaaatctcacggatctggacgaaggaaggaaggcaattacatcccttttttgcatgttcgaaagcggggaagaaaagtcaggaggcaactgaagtcgagggcagttcaagcttcatggggagtaaggagaaatatcttacttgtgccccaattcatgtgtttgaagatactcaggacgatgctgtgtttcttgattggagaaattggacattttgtgaggaaactagtctgacaagtggtcctcatcatgaatgcatgcagtcctcaatatttgagggctctgttgagtgcttaacttttgataaggaatgtgctcatgaaacatcatccacagtccctcagtttttgcctaatgagcaaatgaggtgctatcagcactcaaaggaagtagaggattgtgagggtggtttgttttctgagcatactggttgcatgaaggagtcagatattgagcagcagaatacatttctggaggaaaggatgtcaaacaattctggttgctgtgatcactctgagaatagcttatggacatataagtaccagccaaagaatggcagggaggtatgtggtaataatgaatctgtgaggtttttgagtgagtggcttcgttcttggtatgaacgagatcttcaaaccagtgaagatggtgacaggcaaggcattgattataagtgcactcaaagtgactcagaaagtgaagatgatgaggtcttgaagaaaaagaatgttttgttagttacagggccaattgggagtggaaagtctgcagctatatatgcgtgtgcaaaagaacaagggattaaggttttggagctcagtgcatcagagtgtcggactggagctactgtaaaacagaagtttggagaggcgttcaaatctcgcaaatttcaaagatcagtggccaatgctgctggttcacagaacaagcttattatgaagtctcgctttgttgaggctaatggtacgacaggccaagacttggatggtgatgatgatgatcttgttgaactgatacccatatcagatgaagaaagtcatgatgctactggaacttctgtaacatttgccttcaaggaggactgttgcaaagataaacttgttatactttttgaggatgtggacattacttttcaagaagaacgtggttttattgcagcaattcagcagatagctaaaacagcgaatgggcccataatattgaccagcaatagtccaaaacctgacctgccagacagttttgatagattacaagtgcatttcatgttgccatcatcagtggagctgtattcccatgcatatatggtttgtgctgcagagagagccagcatacagccctatttacttgagcgatttattgaatgttgtggaggagatattcgaaaaattattatgcatcttcagttctggtgccaaggaagaagttttagaaaagatacaaaaatgatgcgagagacgtatggttcattgctatttgatgttgaggctggtcatcagatgctgccaaaattattaccttgggatttaccttctcagttatctgatttagtagagaaagagataaccaagtcattatcaatgatggaagaaggtttaagcccaatggaggtagatgacaatacagaagtgcaatgtagtttgaacatggcttatagtgaaatggaaaatatggaggccaagaaggtagcaatgctgagcaggaatggctatactcatgagtgcagtgagtatacagcaactgatgctgctccctacttttctaatgattcaagtacctcatttcctttcccccggcgacatgttcggaggatgcatggtgttatattgtcttctgattctgaagatgactttatgaagaatggatatcctagagttacagataaagatactaaccatgaaatccttggagctgactcattatcagagatgctgctttttcctggagtgacaaatatagatagaggactttatgactgtttaaccgcagatgaatttcacacaagtgaaatgtgcaactttgcagatatatcctgtgtgccagaatcgtcttttgttcctgaaactcaaatggataatgaaacaaatttcttatctcaaacaatgtcttctggtcactttgcaacagctataaacgaagtatttttgggcgatgaattaccagttgaagacaataatgaaatagatctgttatctcaaacagtgtcttctggccattttgctaacaccatgaatgaagtacgtttcgatgaagaattacctgttgaagacaacaatcctgctcaattaaaatcaggattacagataaattttgataaggtgggaaataattgtgatgccattctagaatattctcatcaggagttggaagattctcaaagtgaacatggggagactgttgcaagagcttatcaattgatggatgagtgcagccgcatggattttaataagggctccaagtttatacaggagaaaaaaacctcagcagtcagtgatcttgtacaagattcctggaacaaacttcgtggatggcgcaatgatctaaggcagtatgctgcatcagaacaagaggcctctcagattgctatgcttgcttatagaatgagcaatttgatctcggaaactgacatgttgttttctaaatgccaaccactaatgagtgattctgtggaaccatcaatgatcttctcggatgagttggattcattcagctggtgtgatgagcggttgcaattggcatccacaattgcccagcatggattttgcttctatgccaagggcatttcttctgtaggatcaaatgtaggttgtgtgaggagggtggacgtggatatagcccctgagatgttggctaacacaactaatatgatggccttaggtaagttagttggacagggtatgagaacaagtaagacatcatatgctggaagaaattcagagattagtcagccaaatgtgattacaagtgaaatcaagtcacatatatttgatgcaatccagtcaattgtaccttccagattcaacttgacattgagaggcagtgcatacctcgagtatctttcctcacttcgccacatttcaagatcagaagcttctcgtttgtcaaaaggcgtcgagatgaccacaagaagaagaaggaggagggttgctccacactacctgagcagtggtgcaagaatgttgtctcctgaacagttatcattgctagatcagaataacttatgtgggaagaccacctcctcttccaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0001775 GO:0002200 GO:0002204 GO:0002208 GO:0002250 GO:0002252 GO:0002263 GO:0002285 GO:0002312 GO:0002366 GO:0002376 GO:0002377 GO:0002381 GO:0002440 GO:0002443 GO:0002449 GO:0002460 GO:0002520 GO:0002562 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006310 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006955 GO:0006974 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0008283 GO:0008284 GO:0008630 GO:0009058 GO:0009059 GO:0009893 GO:0009966 GO:0009968 GO:0009987 GO:0010564 GO:0010604 GO:0010646 GO:0010648 GO:0010941 GO:0012501 GO:0016064 GO:0016444 GO:0016445 GO:0016447 GO:0019219 GO:0019222 GO:0019724 GO:0022402 GO:0023051 GO:0023052 GO:0023057 GO:0030888 GO:0030890 GO:0031323 GO:0031325 GO:0032501 GO:0032502 GO:0032943 GO:0032944 GO:0032946 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0035556 GO:0042100 GO:0042113 GO:0042127 GO:0042770 GO:0042771 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045190 GO:0045191 GO:0045321 GO:0045830 GO:0045911 GO:0045935 GO:0046483 GO:0046649 GO:0046651 GO:0048302 GO:0048304 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048731 GO:0048856 GO:0050670 GO:0050671 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051249 GO:0051251 GO:0051716 GO:0051726 GO:0060255 GO:0060548 GO:0065007 GO:0070661 GO:0070663 GO:0070665 GO:0071704 GO:0072331 GO:0072332 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097190 GO:0097193 GO:1901360 GO:1901576 GO:1901796 GO:1901797 GO:1901987 GO:1901990 GO:1902165 GO:1902166 GO:1902229 GO:1902230 GO:1902253 GO:1902254 GO:1902531 GO:1902532 GO:2000026 GO:2001020 GO:2001021 GO:2001233 GO:2001234 GO:2001242 GO:2001243
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA Rad17

Protein Analysis

1199

Amino Acids

134.71

Weight (kDa)

5.05

Isoelectric Point (pI)

56.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1023
Acc36I ACCTGC 1 cut(s) 1587
AccB1I GGYRCC 1 cut(s) 1761
AccB7I CCANNNNNTGG 2 cut(s) 905, 1333
AccBSI CCGCTC 1 cut(s) 3073
AccI GTMKAC 2 cut(s) 68, 2081
AclWI GGATC 3 cut(s) 107, 374, 3151
AcoI YGGCCR 3 cut(s) 201, 1254, 2560
AcsI RAATTY 5 cut(s) 1238, 2342, 2434, 2656, 3280
AcuI CTGAAG 3 cut(s) 465, 1736, 2211
AcyI GRCGYC 3 cut(s) 32, 212, 3459
AfaI GTAC 7 cut(s) 262, 893, 1318, 2125, 2589, 2850, 3357
AfiI CCNNNNNNNGG 3 cut(s) 905, 1333, 1957
AflIII ACRYGT 2 cut(s) 2149, 2976
AhdI GACNNNNNGTC 1 cut(s) 591
AhlI ACTAGT 1 cut(s) 578
AjiI CACGTC 1 cut(s) 3175
AjnI CCWGG 2 cut(s) 2290, 2858
AleI CACNNNNGTG 1 cut(s) 2352
AloI GAACNNNNNNTCC 2 cut(s) 143, 175
Alw21I GWGCWC 3 cut(s) 670, 1031, 1170
Alw26I GTCTC 5 cut(s) 49, 1299, 1799, 2735, 3537
Alw44I GTGCAC 1 cut(s) 1027
AlwI GGATC 3 cut(s) 107, 374, 3151
AlwNI CAGNNNCTG 2 cut(s) 1852, 2090
Ama87I CYCGRG 1 cut(s) 3398
ApaI GGGCCC 1 cut(s) 1545
ApaLI GTGCAC 1 cut(s) 1027
ApoI RAATTY 5 cut(s) 1238, 2342, 2434, 2656, 3280
Asp700I GAANNNNTTC 1 cut(s) 3280
AspLEI GCGC 1 cut(s) 2883
AspS9I GGNCC 6 cut(s) 45, 305, 593, 1097, 1541, 1542
AsuC2I CCSGG 2 cut(s) 49, 2143
AsuHPI GGTGA 2 cut(s) 1013, 1352
AsuII TTCGAA 2 cut(s) 413, 1732
AvaI CYCGRG 1 cut(s) 3398
AvaII GGWCC 3 cut(s) 45, 305, 593
AxyI CCTNAGG 1 cut(s) 3223
BaeGI GKGCMC 3 cut(s) 502, 1031, 1545
BalI TGGCCA 2 cut(s) 1256, 2562
BanI GGYRCC 1 cut(s) 1761
BanII GRGCYC 4 cut(s) 635, 1170, 1545, 2804
BbsI GAAGAC 7 cut(s) 215, 2172, 2448, 2523, 2547, 2622, 3584
Bbv12I GWGCWC 3 cut(s) 670, 1031, 1170
BbvCI CCTCAGC 1 cut(s) 2830
BccI CCATC 9 cut(s) 296, 992, 1331, 1630, 1927, 2761, 2871, 3031, 3211
BceAI ACGGC 2 cut(s) 56, 124
BciT130I CCWGG 2 cut(s) 2292, 2860
BclI TGATCA 1 cut(s) 859
BcnI CCSGG 2 cut(s) 49, 2143
BcoDI GTCTC 5 cut(s) 49, 1299, 1799, 2735, 3537
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 4 cut(s) 579, 2220, 2693, 3554
BfmI CTRYAG 3 cut(s) 1119, 1665, 3138
BfuAI ACCTGC 1 cut(s) 1587
BglI GCCNNNNNGGC 1 cut(s) 40
BglII AGATCT 2 cut(s) 979, 2533
BlpI GCTNAGC 1 cut(s) 2045
Bme1390I CCNGG 4 cut(s) 49, 2143, 2292, 2860
Bme18I GGWCC 3 cut(s) 45, 305, 593
BmeRI GACNNNNNGTC 1 cut(s) 591
BmeT110I CYCGRG 1 cut(s) 3398
BmgBI CACGTC 1 cut(s) 3175
BmgT120I GGNCC 6 cut(s) 45, 305, 593, 1097, 1541, 1542
BmiI GGNNCC 6 cut(s) 47, 96, 1543, 1763, 2803, 3021
BmrFI CCNGG 4 cut(s) 49, 2143, 2292, 2860
BpiI GAAGAC 7 cut(s) 215, 2172, 2448, 2523, 2547, 2622, 3584
BplI GAGNNNNNCTC 4 cut(s) 344, 376, 3481, 3513
BpmI CTGGAG 3 cut(s) 845, 1212, 2313
Bpu10I CCTNAGC 2 cut(s) 2830, 3509
Bpu1102I GCTNAGC 1 cut(s) 2045
Bpu14I TTCGAA 2 cut(s) 413, 1732
BpuEI CTTGAG 1 cut(s) 1718
BpuMI CCSGG 2 cut(s) 49, 2143
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 3 cut(s) 32, 212, 3459
BsaJI CCNNGG 5 cut(s) 1765, 1868, 2141, 2254, 3123
BsaXI ACNNNNNCTCC 2 cut(s) 1185, 1215
Bsc4I CCNNNNNNNGG 3 cut(s) 905, 1333, 1957
Bse118I RCCGGY 4 cut(s) 88, 97, 193, 217
Bse1I ACTGG 7 cut(s) 63, 784, 990, 1195, 1405, 2510, 3346
Bse21I CCTNAGG 1 cut(s) 3223
Bse3DI GCAATG 5 cut(s) 1817, 1988, 2046, 2890, 3548
Bse8I GATNNNNATC 1 cut(s) 1350
BseBI CCWGG 2 cut(s) 2292, 2860
BseDI CCNNGG 5 cut(s) 1765, 1868, 2141, 2254, 3123
BseJI GATNNNNATC 1 cut(s) 1350
BseLI CCNNNNNNNGG 3 cut(s) 905, 1333, 1957
BseMI GCAATG 5 cut(s) 1817, 1988, 2046, 2890, 3548
BseNI ACTGG 7 cut(s) 63, 784, 990, 1195, 1405, 2510, 3346
BseRI GAGGAG 5 cut(s) 170, 1737, 3178, 3502, 3577
BseSI GKGCMC 3 cut(s) 502, 1031, 1545
BseYI CCCAGC 1 cut(s) 3099
BsgI GTGCAG 3 cut(s) 83, 2092, 2797
Bsh1285I CGRYCG 1 cut(s) 251
BshNI GGYRCC 1 cut(s) 1761
BsiEI CGRYCG 1 cut(s) 251
BsiHKAI GWGCWC 3 cut(s) 670, 1031, 1170
BsiHKCI CYCGRG 1 cut(s) 3398
BsiSI CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2143
BslFI GGGAC 1 cut(s) 674
BslI CCNNNNNNNGG 3 cut(s) 905, 1333, 1957
BsmAI GTCTC 5 cut(s) 49, 1299, 1799, 2735, 3537
BsmBI CGTCTC 1 cut(s) 1799
BsmFI GGGAC 1 cut(s) 674
BsmI GAATGC 1 cut(s) 611
BsoBI CYCGRG 1 cut(s) 3398
Bsp119I TTCGAA 2 cut(s) 413, 1732
Bsp120I GGGCCC 1 cut(s) 1541
Bsp1286I GDGCHC 7 cut(s) 502, 635, 670, 1031, 1170, 1545, 2804
Bsp1407I TGTACA 1 cut(s) 2848
Bsp1720I GCTNAGC 1 cut(s) 2045
BspHI TCATGA 4 cut(s) 601, 670, 1390, 2065
BspLI GGNNCC 6 cut(s) 47, 96, 1543, 1763, 2803, 3021
BspMAI CTGCAG 2 cut(s) 1123, 1669
BspMI ACCTGC 1 cut(s) 1587
BspPI GGATC 3 cut(s) 107, 374, 3151
BspT104I TTCGAA 2 cut(s) 413, 1732
BspT107I GGYRCC 1 cut(s) 1761
BsrBI CCGCTC 1 cut(s) 3073
BsrDI GCAATG 5 cut(s) 1817, 1988, 2046, 2890, 3548
BsrFI RCCGGY 4 cut(s) 88, 97, 193, 217
BsrGI TGTACA 1 cut(s) 2848
BsrI ACTGG 7 cut(s) 63, 784, 990, 1195, 1405, 2510, 3346
BssAI RCCGGY 4 cut(s) 88, 97, 193, 217
BssECI CCNNGG 5 cut(s) 1765, 1868, 2141, 2254, 3123
BssNAI GTATAC 1 cut(s) 2082
BssNI GRCGYC 3 cut(s) 32, 212, 3459
BssT1I CCWWGG 4 cut(s) 1765, 1868, 2254, 3123
Bst1107I GTATAC 1 cut(s) 2082
Bst2UI CCWGG 2 cut(s) 2292, 2860
Bst4CI ACNGT 9 cut(s) 242, 688, 1201, 1436, 1589, 2327, 2551, 2746, 3543
Bst6I CTCTTC 3 cut(s) 129, 179, 3595
BstACI GRCGYC 3 cut(s) 32, 212, 3459
BstAPI GCANNNNNTGC 1 cut(s) 2093
BstAUI TGTACA 1 cut(s) 2848
BstBI TTCGAA 2 cut(s) 413, 1732
BstC8I GCNNGC 5 cut(s) 90, 195, 611, 1678, 2940
BstHHI GCGC 1 cut(s) 2883
BstMAI GTCTC 5 cut(s) 49, 1299, 1799, 2735, 3537
BstMCI CGRYCG 1 cut(s) 251
BstNI CCWGG 2 cut(s) 2292, 2860
BstNSI RCATGY 4 cut(s) 411, 613, 2153, 2980
BstSCI CCNGG 4 cut(s) 47, 2141, 2290, 2858
BstSFI CTRYAG 3 cut(s) 1119, 1665, 3138
BstSLI GKGCMC 3 cut(s) 502, 1031, 1545
BstV2I GAAGAC 7 cut(s) 215, 2172, 2448, 2523, 2547, 2622, 3584
BstX2I RGATCY 3 cut(s) 366, 979, 2533
BstYI RGATCY 3 cut(s) 366, 979, 2533
BstZ17I GTATAC 1 cut(s) 2082
Bsu36I CCTNAGG 1 cut(s) 3223
BtgZI GCGATG 1 cut(s) 2514
BtrI CACGTC 1 cut(s) 3175
BtsI GCAGTG 3 cut(s) 2080, 3394, 3520
BtsIMutI CAGTG 9 cut(s) 997, 1177, 1257, 1635, 2080, 2556, 2845, 3394, 3520
BveI ACCTGC 1 cut(s) 1587
Cac8I GCNNGC 5 cut(s) 90, 195, 611, 1678, 2940
CaiI CAGNNNCTG 2 cut(s) 1852, 2090
CciI TCATGA 4 cut(s) 601, 670, 1390, 2065
CfoI GCGC 1 cut(s) 2883
Cfr10I RCCGGY 4 cut(s) 88, 97, 193, 217
Cfr13I GGNCC 6 cut(s) 45, 305, 593, 1097, 1541, 1542
CseI GACGC 4 cut(s) 40, 79, 220, 3448
Csp6I GTAC 7 cut(s) 261, 892, 1317, 2124, 2588, 2849, 3356
CspCI CAANNNNNGTGG 2 cut(s) 2854, 2889
CviQI GTAC 7 cut(s) 261, 892, 1317, 2124, 2588, 2849, 3356
DriI GACNNNNNGTC 1 cut(s) 591
EaeI YGGCCR 3 cut(s) 201, 1254, 2560
Eam1104I CTCTTC 3 cut(s) 129, 179, 3595
Eam1105I GACNNNNNGTC 1 cut(s) 591
EarI CTCTTC 3 cut(s) 129, 179, 3595
EciI GGCGGA 3 cut(s) 58, 67, 107
Ecl136II GAGCTC 1 cut(s) 1168
Eco130I CCWWGG 4 cut(s) 1765, 1868, 2254, 3123
Eco147I AGGCCT 1 cut(s) 2921
Eco24I GRGCYC 4 cut(s) 635, 1170, 1545, 2804
Eco32I GATATC 1 cut(s) 2216
Eco47I GGWCC 3 cut(s) 45, 305, 593
Eco53kI GAGCTC 1 cut(s) 1168
Eco57I CTGAAG 3 cut(s) 465, 1736, 2211
Eco81I CCTNAGG 1 cut(s) 3223
Eco88I CYCGRG 1 cut(s) 3398
EcoICRI GAGCTC 1 cut(s) 1168
EcoRII CCWGG 2 cut(s) 2290, 2858
EcoRV GATATC 1 cut(s) 2216
EcoT14I CCWWGG 4 cut(s) 1765, 1868, 2254, 3123
EcoT22I ATGCAT 4 cut(s) 611, 1651, 1749, 2166
EcoT38I GRGCYC 4 cut(s) 635, 1170, 1545, 2804
ErhI CCWWGG 4 cut(s) 1765, 1868, 2254, 3123
Esp3I CGTCTC 1 cut(s) 1799
FalI AAGNNNNNCTT 4 cut(s) 1283, 1315, 1434, 1466
FaqI GGGAC 1 cut(s) 674
FauI CCCGC 1 cut(s) 412
FauNDI CATATG 1 cut(s) 3268
FbaI TGATCA 1 cut(s) 859
FblI GTMKAC 2 cut(s) 68, 2081
FriOI GRGCYC 4 cut(s) 635, 1170, 1545, 2804
FspBI CTAG 4 cut(s) 579, 2220, 2693, 3554
GlaI GCGC 1 cut(s) 2882
GsaI CCCAGC 1 cut(s) 3103
GsuI CTGGAG 3 cut(s) 845, 1212, 2313
HapII CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2143
HgaI GACGC 4 cut(s) 40, 79, 220, 3448
HhaI GCGC 1 cut(s) 2883
Hin1I GRCGYC 3 cut(s) 32, 212, 3459
Hin6I GCGC 1 cut(s) 2881
HinP1I GCGC 1 cut(s) 2881
HincII GTYRAC 1 cut(s) 69
HindII GTYRAC 1 cut(s) 69
HindIII AAGCTT 3 cut(s) 463, 1280, 3438
HpaII CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2143
HphI GGTGA 2 cut(s) 1013, 1352
Hpy166II GTNNAC 8 cut(s) 69, 263, 1029, 1271, 1474, 2082, 2732, 3172
Hpy8I GTNNAC 8 cut(s) 69, 263, 1029, 1271, 1474, 2082, 2732, 3172
Hpy99I CGWCG 4 cut(s) 34, 73, 271, 3464
HpyCH4III ACNGT 9 cut(s) 242, 688, 1201, 1436, 1589, 2327, 2551, 2746, 3543
HpyCH4IV ACGT 4 cut(s) 1495, 1808, 2590, 3174
HpySE526I ACGT 4 cut(s) 1495, 1808, 2590, 3174
Hsp92I GRCGYC 3 cut(s) 32, 212, 3459
HspAI GCGC 1 cut(s) 2881
KroI GCCGGC 2 cut(s) 88, 193
KroNI GCCGGC 2 cut(s) 90, 195
Ksp22I TGATCA 1 cut(s) 859
LmnI GCTCC 9 cut(s) 94, 232, 1165, 1193, 1633, 2104, 2258, 2807, 3502
MaeI CTAG 4 cut(s) 579, 2220, 2693, 3554
MaeII ACGT 4 cut(s) 1495, 1808, 2590, 3174
MaeIII GTNAC 8 cut(s) 1001, 1037, 1090, 1411, 2224, 2296, 2462, 3324
MbiI CCGCTC 1 cut(s) 3073
MfeI CAATTG 5 cut(s) 1101, 2762, 3080, 3093, 3351
MflI RGATCY 3 cut(s) 366, 979, 2533
MhlI GDGCHC 7 cut(s) 502, 635, 670, 1031, 1170, 1545, 2804
MlsI TGGCCA 2 cut(s) 1256, 2562
MluNI TGGCCA 2 cut(s) 1256, 2562
MlyI GAGTC 4 cut(s) 178, 803, 1034, 2258
MmeI TCCRAC 4 cut(s) 1166, 2694, 3027, 3217
Mox20I TGGCCA 2 cut(s) 1256, 2562
Mph1103I ATGCAT 4 cut(s) 611, 1651, 1749, 2166
MroNI GCCGGC 2 cut(s) 88, 193
MroXI GAANNNNTTC 1 cut(s) 3280
MscI TGGCCA 2 cut(s) 1256, 2562
MseI TTAA 8 cut(s) 222, 647, 1155, 1946, 2330, 2636, 2793, 3598
MslI CAYNNNNRTG 2 cut(s) 1180, 2352
Msp20I TGGCCA 2 cut(s) 1256, 2562
MspA1I CMGCKG 1 cut(s) 3060
MspI CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2143
MspR9I CCNGG 4 cut(s) 49, 2143, 2292, 2860
MunI CAATTG 5 cut(s) 1101, 2762, 3080, 3093, 3351
Mva1269I GAATGC 1 cut(s) 611
MvaI CCWGG 2 cut(s) 2292, 2860
NaeI GCCGGC 2 cut(s) 90, 195
NciI CCSGG 2 cut(s) 49, 2143
NdeI CATATG 1 cut(s) 3268
NgoMIV GCCGGC 2 cut(s) 88, 193
NlaIV GGNNCC 6 cut(s) 47, 96, 1543, 1763, 2803, 3021
NmuCI GTSAC 5 cut(s) 1001, 1037, 2296, 2462, 3324
NsiI ATGCAT 4 cut(s) 611, 1651, 1749, 2166
NspI RCATGY 4 cut(s) 411, 613, 2153, 2980
NspV TTCGAA 2 cut(s) 413, 1732
OliI CACNNNNGTG 1 cut(s) 2352
PaeI GCATGC 1 cut(s) 613
PaeR7I CTCGAG 1 cut(s) 3398
PagI TCATGA 4 cut(s) 601, 670, 1390, 2065
PceI AGGCCT 1 cut(s) 2921
PciI ACATGT 2 cut(s) 2149, 2976
PctI GAATGC 1 cut(s) 611
PdiI GCCGGC 2 cut(s) 90, 195
PdmI GAANNNNTTC 1 cut(s) 3280
PflMI CCANNNNNTGG 2 cut(s) 905, 1333
PfoI TCCNGGA 2 cut(s) 2290, 2858
Ple19I CGATCG 1 cut(s) 251
PleI GAGTC 4 cut(s) 177, 802, 1034, 2258
PpsI GAGTC 4 cut(s) 177, 802, 1034, 2258
PscI ACATGT 2 cut(s) 2149, 2976
PsiI TTATAA 1 cut(s) 1023
Psp124BI GAGCTC 1 cut(s) 1170
Psp6I CCWGG 2 cut(s) 2290, 2858
PspFI CCCAGC 1 cut(s) 3099
PspGI CCWGG 2 cut(s) 2290, 2858
PspN4I GGNNCC 6 cut(s) 47, 96, 1543, 1763, 2803, 3021
PspOMI GGGCCC 1 cut(s) 1541
PspPI GGNCC 6 cut(s) 45, 305, 593, 1097, 1541, 1542
PspXI VCTCGAGB 1 cut(s) 3398
PstI CTGCAG 2 cut(s) 1123, 1669
PstNI CAGNNNCTG 2 cut(s) 1852, 2090
PsuI RGATCY 3 cut(s) 366, 979, 2533
PvuI CGATCG 1 cut(s) 251
PvuII CAGCTG 1 cut(s) 3060
RsaI GTAC 7 cut(s) 262, 893, 1318, 2125, 2589, 2850, 3357
RsaNI GTAC 7 cut(s) 261, 892, 1317, 2124, 2588, 2849, 3356
RseI CAYNNNNRTG 2 cut(s) 1180, 2352
SacI GAGCTC 1 cut(s) 1170
SalI GTCGAC 1 cut(s) 67
SaqAI TTAA 8 cut(s) 222, 647, 1155, 1946, 2330, 2636, 2793, 3598
Sau96I GGNCC 6 cut(s) 45, 305, 593, 1097, 1541, 1542
SchI GAGTC 4 cut(s) 178, 803, 1034, 2258
ScrFI CCNGG 4 cut(s) 49, 2143, 2292, 2860
SduI GDGCHC 7 cut(s) 502, 635, 670, 1031, 1170, 1545, 2804
SfcI CTRYAG 3 cut(s) 1119, 1665, 3138
Sfr274I CTCGAG 1 cut(s) 3398
SfuI TTCGAA 2 cut(s) 413, 1732
SinI GGWCC 3 cut(s) 45, 305, 593
SlaI CTCGAG 1 cut(s) 3398
SmiMI CAYNNNNRTG 2 cut(s) 1180, 2352
SmlI CTYRAG 2 cut(s) 1697, 3398
SmoI CTYRAG 2 cut(s) 1697, 3398
SpeI ACTAGT 1 cut(s) 578
SphI GCATGC 1 cut(s) 613
SseBI AGGCCT 1 cut(s) 2921
SspI AATATT 3 cut(s) 624, 1551, 2699
SspMI CTAG 4 cut(s) 579, 2220, 2693, 3554
SstI GAGCTC 1 cut(s) 1170
StuI AGGCCT 1 cut(s) 2921
StyD4I CCNGG 4 cut(s) 47, 2141, 2290, 2858
StyI CCWWGG 4 cut(s) 1765, 1868, 2254, 3123
TaaI ACNGT 9 cut(s) 242, 688, 1201, 1436, 1589, 2327, 2551, 2746, 3543
TaiI ACGT 4 cut(s) 1498, 1811, 2593, 3177
TaqI TCGA 7 cut(s) 68, 413, 450, 1732, 2595, 3399, 3462
TatI WGTACW 2 cut(s) 260, 2848
TauI GCSGC 5 cut(s) 16, 200, 203, 217, 2784
Tru1I TTAA 8 cut(s) 222, 647, 1155, 1946, 2330, 2636, 2793, 3598
Tru9I TTAA 8 cut(s) 222, 647, 1155, 1946, 2330, 2636, 2793, 3598
TscAI CASTG 9 cut(s) 997, 1177, 1257, 1635, 2080, 2556, 2845, 3394, 3520
TseFI GTSAC 5 cut(s) 1001, 1037, 2296, 2462, 3324
Tsp45I GTSAC 5 cut(s) 1001, 1037, 2296, 2462, 3324
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 9 cut(s) 997, 1177, 1257, 1635, 2080, 2556, 2845, 3394, 3520
Van91I CCANNNNNTGG 2 cut(s) 905, 1333
VneI GTGCAC 1 cut(s) 1027
VpaK11BI GGWCC 3 cut(s) 45, 305, 593
XapI RAATTY 5 cut(s) 1238, 2342, 2434, 2656, 3280
XbaI TCTAGA 1 cut(s) 2692
XceI RCATGY 4 cut(s) 411, 613, 2153, 2980
XcmI CCANNNNNNNNNTGG 3 cut(s) 902, 1334, 2252
XhoI CTCGAG 1 cut(s) 3398
XmiI GTMKAC 2 cut(s) 68, 2081
XmnI GAANNNNTTC 1 cut(s) 3280
XspI CTAG 4 cut(s) 579, 2220, 2693, 3554
Zsp2I ATGCAT 4 cut(s) 611, 1651, 1749, 2166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.