superfamily. Protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77620 |
| fragaria_vesca | FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 |
| malus_domestica | MD15G1351000.v1.1 |
| prunus_persica | Prupe.1G499900_v2.0.a1 |
| pyrus_communis | pycom15g31350 |
| rosa_chinensis | RchiOBHm_Chr6g0295641 |
| rosa_laevigata | RLG00000011780 |
| rosa_multiflora | Rmu_sc0005000.1_g000001 Rmu_sc0006802.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00172280 |
| rosa_rugosa | Rorug06G0253100 Rorug06G0253100 |
| rosa_samantha | Rh6AG366100 Rh6BG374200 Rh6CG380500 Rh6DG367300 |
| rosa_wichuraiana | Rw6G031950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1101 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1139 |
| Acc36I | ACCTGC | 1 cut(s) | 1665 |
| AccB1I | GGYRCC | 1 cut(s) | 1839 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 983, 1411 |
| AccBSI | CCGCTC | 1 cut(s) | 3151 |
| AccI | GTMKAC | 2 cut(s) | 68, 2159 |
| AclWI | GGATC | 3 cut(s) | 107, 374, 3229 |
| AcoI | YGGCCR | 3 cut(s) | 198, 1332, 2638 |
| AcsI | RAATTY | 5 cut(s) | 649, 1316, 2420, 2734, 3358 |
| AcuI | CTGAAG | 4 cut(s) | 465, 1814, 2289, 3198 |
| AcyI | GRCGYC | 3 cut(s) | 32, 212, 3537 |
| AfaI | GTAC | 6 cut(s) | 262, 971, 1396, 2203, 2928, 3435 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 983, 1411, 2035 |
| AflIII | ACRYGT | 2 cut(s) | 2227, 3054 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 591 |
| AhlI | ACTAGT | 1 cut(s) | 578 |
| AjiI | CACGTC | 1 cut(s) | 3253 |
| AjnI | CCWGG | 1 cut(s) | 2368 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 143, 175 |
| Alw21I | GWGCWC | 3 cut(s) | 748, 1109, 1248 |
| Alw26I | GTCTC | 5 cut(s) | 49, 1377, 1877, 2813, 3615 |
| Alw44I | GTGCAC | 1 cut(s) | 1105 |
| AlwI | GGATC | 3 cut(s) | 107, 374, 3229 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1930, 2168, 3050 |
| Ama87I | CYCGRG | 1 cut(s) | 3476 |
| ApaI | GGGCCC | 1 cut(s) | 1623 |
| ApaLI | GTGCAC | 1 cut(s) | 1105 |
| ApeKI | GCWGC | 9 cut(s) | 886, 1199, 1340, 1586, 1742, 1930, 2174, 2856, 2981 |
| ApoI | RAATTY | 5 cut(s) | 649, 1316, 2420, 2734, 3358 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3358 |
| AspLEI | GCGC | 1 cut(s) | 2961 |
| AspS9I | GGNCC | 6 cut(s) | 45, 305, 593, 1175, 1619, 1620 |
| AsuC2I | CCSGG | 2 cut(s) | 49, 2221 |
| AsuHPI | GGTGA | 1 cut(s) | 1091 |
| AsuII | TTCGAA | 2 cut(s) | 413, 1810 |
| AvaI | CYCGRG | 1 cut(s) | 3476 |
| AvaII | GGWCC | 3 cut(s) | 45, 305, 593 |
| AxyI | CCTNAGG | 1 cut(s) | 3301 |
| BaeGI | GKGCMC | 3 cut(s) | 502, 1109, 1623 |
| BalI | TGGCCA | 2 cut(s) | 1334, 2640 |
| BanI | GGYRCC | 1 cut(s) | 1839 |
| BanII | GRGCYC | 4 cut(s) | 635, 1248, 1623, 2882 |
| BbsI | GAAGAC | 8 cut(s) | 215, 1137, 2250, 2526, 2601, 2625, 2700, 3662 |
| Bbv12I | GWGCWC | 3 cut(s) | 748, 1109, 1248 |
| BbvCI | CCTCAGC | 1 cut(s) | 2908 |
| BbvI | GCAGC | 9 cut(s) | 898, 1211, 1327, 1598, 1729, 1917, 2161, 2868, 2968 |
| BccI | CCATC | 9 cut(s) | 296, 1070, 1708, 2005, 2839, 2949, 3109, 3289, 3671 |
| BceAI | ACGGC | 2 cut(s) | 56, 124 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 58, 92 |
| BciT130I | CCWGG | 1 cut(s) | 2370 |
| BclI | TGATCA | 2 cut(s) | 145, 937 |
| BcnI | CCSGG | 2 cut(s) | 49, 2221 |
| BcoDI | GTCTC | 5 cut(s) | 49, 1377, 1877, 2813, 3615 |
| BcuI | ACTAGT | 1 cut(s) | 578 |
| BfaI | CTAG | 5 cut(s) | 579, 666, 927, 2771, 3632 |
| BfmI | CTRYAG | 4 cut(s) | 1197, 1743, 2298, 2412 |
| BfuAI | ACCTGC | 1 cut(s) | 1665 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 40 |
| BglII | AGATCT | 2 cut(s) | 1057, 2611 |
| BlpI | GCTNAGC | 1 cut(s) | 2123 |
| Bme1390I | CCNGG | 3 cut(s) | 49, 2221, 2370 |
| Bme18I | GGWCC | 3 cut(s) | 45, 305, 593 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 591 |
| BmeT110I | CYCGRG | 1 cut(s) | 3476 |
| BmgBI | CACGTC | 1 cut(s) | 3253 |
| BmgT120I | GGNCC | 6 cut(s) | 45, 305, 593, 1175, 1619, 1620 |
| BmiI | GGNNCC | 5 cut(s) | 47, 1621, 1841, 2881, 3099 |
| BmrFI | CCNGG | 3 cut(s) | 49, 2221, 2370 |
| BpiI | GAAGAC | 8 cut(s) | 215, 1137, 2250, 2526, 2601, 2625, 2700, 3662 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 344, 376, 3113, 3145, 3559, 3591 |
| BpmI | CTGGAG | 3 cut(s) | 923, 1290, 2391 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2908, 3587 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2123 |
| Bpu14I | TTCGAA | 2 cut(s) | 413, 1810 |
| BpuEI | CTTGAG | 1 cut(s) | 1796 |
| BpuMI | CCSGG | 2 cut(s) | 49, 2221 |
| Bsa29I | ATCGAT | 1 cut(s) | 2499 |
| BsaHI | GRCGYC | 3 cut(s) | 32, 212, 3537 |
| BsaJI | CCNNGG | 5 cut(s) | 1843, 1946, 2219, 2332, 3201 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1263, 1293 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 983, 1411, 2035 |
| Bse118I | RCCGGY | 3 cut(s) | 88, 193, 217 |
| Bse1I | ACTGG | 7 cut(s) | 63, 862, 1068, 1273, 1483, 2588, 3424 |
| Bse21I | CCTNAGG | 1 cut(s) | 3301 |
| Bse3DI | GCAATG | 5 cut(s) | 1895, 2066, 2124, 2968, 3626 |
| BseBI | CCWGG | 1 cut(s) | 2370 |
| BseCI | ATCGAT | 1 cut(s) | 2499 |
| BseDI | CCNNGG | 5 cut(s) | 1843, 1946, 2219, 2332, 3201 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 983, 1411, 2035 |
| BseMI | GCAATG | 5 cut(s) | 1895, 2066, 2124, 2968, 3626 |
| BseNI | ACTGG | 7 cut(s) | 63, 862, 1068, 1273, 1483, 2588, 3424 |
| BseRI | GAGGAG | 4 cut(s) | 170, 1815, 3256, 3580 |
| BseSI | GKGCMC | 3 cut(s) | 502, 1109, 1623 |
| BseX3I | CGGCCG | 1 cut(s) | 198 |
| BseXI | GCAGC | 9 cut(s) | 898, 1211, 1327, 1598, 1729, 1917, 2161, 2868, 2968 |
| BseYI | CCCAGC | 1 cut(s) | 3177 |
| BsgI | GTGCAG | 3 cut(s) | 83, 2170, 2875 |
| Bsh1285I | CGRYCG | 2 cut(s) | 201, 251 |
| BshNI | GGYRCC | 1 cut(s) | 1839 |
| BshVI | ATCGAT | 1 cut(s) | 2499 |
| BsiEI | CGRYCG | 2 cut(s) | 201, 251 |
| BsiHKAI | GWGCWC | 3 cut(s) | 748, 1109, 1248 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3476 |
| BsiSI | CCGG | 6 cut(s) | 26, 49, 89, 194, 218, 2221 |
| BslFI | GGGAC | 1 cut(s) | 752 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 983, 1411, 2035 |
| BsmAI | GTCTC | 5 cut(s) | 49, 1377, 1877, 2813, 3615 |
| BsmFI | GGGAC | 1 cut(s) | 752 |
| BsmI | GAATGC | 1 cut(s) | 611 |
| BsoBI | CYCGRG | 1 cut(s) | 3476 |
| Bsp119I | TTCGAA | 2 cut(s) | 413, 1810 |
| Bsp120I | GGGCCC | 1 cut(s) | 1619 |
| Bsp1286I | GDGCHC | 7 cut(s) | 502, 635, 748, 1109, 1248, 1623, 2882 |
| Bsp1407I | TGTACA | 1 cut(s) | 2926 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2123 |
| BspDI | ATCGAT | 1 cut(s) | 2499 |
| BspHI | TCATGA | 3 cut(s) | 601, 748, 2143 |
| BspLI | GGNNCC | 5 cut(s) | 47, 1621, 1841, 2881, 3099 |
| BspMAI | CTGCAG | 3 cut(s) | 1201, 1747, 2416 |
| BspMI | ACCTGC | 1 cut(s) | 1665 |
| BspPI | GGATC | 3 cut(s) | 107, 374, 3229 |
| BspT104I | TTCGAA | 2 cut(s) | 413, 1810 |
| BspT107I | GGYRCC | 1 cut(s) | 1839 |
| BsrBI | CCGCTC | 1 cut(s) | 3151 |
| BsrDI | GCAATG | 5 cut(s) | 1895, 2066, 2124, 2968, 3626 |
| BsrFI | RCCGGY | 3 cut(s) | 88, 193, 217 |
| BsrGI | TGTACA | 1 cut(s) | 2926 |
| BsrI | ACTGG | 7 cut(s) | 63, 862, 1068, 1273, 1483, 2588, 3424 |
| BssAI | RCCGGY | 3 cut(s) | 88, 193, 217 |
| BssECI | CCNNGG | 5 cut(s) | 1843, 1946, 2219, 2332, 3201 |
| BssNAI | GTATAC | 1 cut(s) | 2160 |
| BssNI | GRCGYC | 3 cut(s) | 32, 212, 3537 |
| BssT1I | CCWWGG | 4 cut(s) | 1843, 1946, 2332, 3201 |
| Bst1107I | GTATAC | 1 cut(s) | 2160 |
| Bst2UI | CCWGG | 1 cut(s) | 2370 |
| Bst6I | CTCTTC | 3 cut(s) | 129, 179, 3673 |
| BstACI | GRCGYC | 3 cut(s) | 32, 212, 3537 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2171 |
| BstAUI | TGTACA | 1 cut(s) | 2926 |
| BstBI | TTCGAA | 2 cut(s) | 413, 1810 |
| BstC8I | GCNNGC | 5 cut(s) | 90, 195, 611, 1756, 3018 |
| BstHHI | GCGC | 1 cut(s) | 2961 |
| BstMAI | GTCTC | 5 cut(s) | 49, 1377, 1877, 2813, 3615 |
| BstMCI | CGRYCG | 2 cut(s) | 201, 251 |
| BstNI | CCWGG | 1 cut(s) | 2370 |
| BstNSI | RCATGY | 4 cut(s) | 411, 613, 2231, 3058 |
| BstSCI | CCNGG | 3 cut(s) | 47, 2219, 2368 |
| BstSFI | CTRYAG | 4 cut(s) | 1197, 1743, 2298, 2412 |
| BstSLI | GKGCMC | 3 cut(s) | 502, 1109, 1623 |
| BstV1I | GCAGC | 9 cut(s) | 898, 1211, 1327, 1598, 1729, 1917, 2161, 2868, 2968 |
| BstV2I | GAAGAC | 8 cut(s) | 215, 1137, 2250, 2526, 2601, 2625, 2700, 3662 |
| BstX2I | RGATCY | 3 cut(s) | 366, 1057, 2611 |
| BstYI | RGATCY | 3 cut(s) | 366, 1057, 2611 |
| BstZ17I | GTATAC | 1 cut(s) | 2160 |
| BstZI | CGGCCG | 1 cut(s) | 198 |
| Bsu15I | ATCGAT | 1 cut(s) | 2499 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3301 |
| BsuTUI | ATCGAT | 1 cut(s) | 2499 |
| BtgZI | GCGATG | 1 cut(s) | 2592 |
| BtrI | CACGTC | 1 cut(s) | 3253 |
| BtsI | GCAGTG | 3 cut(s) | 2158, 3472, 3598 |
| BveI | ACCTGC | 1 cut(s) | 1665 |
| Cac8I | GCNNGC | 5 cut(s) | 90, 195, 611, 1756, 3018 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1930, 2168, 3050 |
| CciI | TCATGA | 3 cut(s) | 601, 748, 2143 |
| CciNI | GCGGCCGC | 1 cut(s) | 198 |
| CfoI | GCGC | 1 cut(s) | 2961 |
| Cfr10I | RCCGGY | 3 cut(s) | 88, 193, 217 |
| Cfr13I | GGNCC | 6 cut(s) | 45, 305, 593, 1175, 1619, 1620 |
| ClaI | ATCGAT | 1 cut(s) | 2499 |
| CseI | GACGC | 4 cut(s) | 40, 79, 220, 3526 |
| Csp6I | GTAC | 6 cut(s) | 261, 970, 1395, 2202, 2927, 3434 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2932, 2967 |
| CviQI | GTAC | 6 cut(s) | 261, 970, 1395, 2202, 2927, 3434 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1139 |
| DriI | GACNNNNNGTC | 1 cut(s) | 591 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1139 |
| EaeI | YGGCCR | 3 cut(s) | 198, 1332, 2638 |
| EagI | CGGCCG | 1 cut(s) | 198 |
| Eam1104I | CTCTTC | 3 cut(s) | 129, 179, 3673 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 591 |
| EarI | CTCTTC | 3 cut(s) | 129, 179, 3673 |
| EciI | GGCGGA | 3 cut(s) | 58, 67, 107 |
| Ecl136II | GAGCTC | 1 cut(s) | 1246 |
| EclXI | CGGCCG | 1 cut(s) | 198 |
| Eco130I | CCWWGG | 4 cut(s) | 1843, 1946, 2332, 3201 |
| Eco147I | AGGCCT | 1 cut(s) | 2999 |
| Eco24I | GRGCYC | 4 cut(s) | 635, 1248, 1623, 2882 |
| Eco32I | GATATC | 1 cut(s) | 2294 |
| Eco47I | GGWCC | 3 cut(s) | 45, 305, 593 |
| Eco52I | CGGCCG | 1 cut(s) | 198 |
| Eco53kI | GAGCTC | 1 cut(s) | 1246 |
| Eco57I | CTGAAG | 4 cut(s) | 465, 1814, 2289, 3198 |
| Eco81I | CCTNAGG | 1 cut(s) | 3301 |
| Eco88I | CYCGRG | 1 cut(s) | 3476 |
| EcoICRI | GAGCTC | 1 cut(s) | 1246 |
| EcoRII | CCWGG | 1 cut(s) | 2368 |
| EcoRV | GATATC | 1 cut(s) | 2294 |
| EcoT14I | CCWWGG | 4 cut(s) | 1843, 1946, 2332, 3201 |
| EcoT22I | ATGCAT | 4 cut(s) | 611, 1729, 1827, 2244 |
| EcoT38I | GRGCYC | 4 cut(s) | 635, 1248, 1623, 2882 |
| ErhI | CCWWGG | 4 cut(s) | 1843, 1946, 2332, 3201 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1361, 1393, 1512, 1544 |
| FaqI | GGGAC | 1 cut(s) | 752 |
| FauI | CCCGC | 2 cut(s) | 158, 412 |
| FauNDI | CATATG | 2 cut(s) | 1888, 3346 |
| FbaI | TGATCA | 2 cut(s) | 145, 937 |
| FblI | GTMKAC | 2 cut(s) | 68, 2159 |
| FriOI | GRGCYC | 4 cut(s) | 635, 1248, 1623, 2882 |
| FspBI | CTAG | 5 cut(s) | 579, 666, 927, 2771, 3632 |
| GlaI | GCGC | 1 cut(s) | 2960 |
| GsaI | CCCAGC | 1 cut(s) | 3181 |
| GsuI | CTGGAG | 3 cut(s) | 923, 1290, 2391 |
| HapII | CCGG | 6 cut(s) | 26, 49, 89, 194, 218, 2221 |
| HgaI | GACGC | 4 cut(s) | 40, 79, 220, 3526 |
| HhaI | GCGC | 1 cut(s) | 2961 |
| Hin1I | GRCGYC | 3 cut(s) | 32, 212, 3537 |
| Hin6I | GCGC | 1 cut(s) | 2959 |
| HinP1I | GCGC | 1 cut(s) | 2959 |
| HincII | GTYRAC | 1 cut(s) | 69 |
| HindII | GTYRAC | 1 cut(s) | 69 |
| HindIII | AAGCTT | 4 cut(s) | 463, 1358, 1526, 3516 |
| HpaII | CCGG | 6 cut(s) | 26, 49, 89, 194, 218, 2221 |
| HphI | GGTGA | 1 cut(s) | 1091 |
| Hpy166II | GTNNAC | 8 cut(s) | 69, 263, 1107, 1349, 1552, 2160, 2810, 3250 |
| Hpy8I | GTNNAC | 8 cut(s) | 69, 263, 1107, 1349, 1552, 2160, 2810, 3250 |
| Hpy99I | CGWCG | 4 cut(s) | 34, 73, 271, 3542 |
| HpyCH4IV | ACGT | 4 cut(s) | 1554, 1573, 2668, 3252 |
| HpySE526I | ACGT | 4 cut(s) | 1554, 1573, 2668, 3252 |
| Hsp92I | GRCGYC | 3 cut(s) | 32, 212, 3537 |
| HspAI | GCGC | 1 cut(s) | 2959 |
| KroI | GCCGGC | 2 cut(s) | 88, 193 |
| KroNI | GCCGGC | 2 cut(s) | 90, 195 |
| Ksp22I | TGATCA | 2 cut(s) | 145, 937 |
| LmnI | GCTCC | 9 cut(s) | 94, 232, 1243, 1271, 1711, 2182, 2336, 2885, 3580 |
| Lsp1109I | GCAGC | 9 cut(s) | 898, 1211, 1327, 1598, 1729, 1917, 2161, 2868, 2968 |
| MaeI | CTAG | 5 cut(s) | 579, 666, 927, 2771, 3632 |
| MaeII | ACGT | 4 cut(s) | 1554, 1573, 2668, 3252 |
| MaeIII | GTNAC | 9 cut(s) | 1079, 1115, 1168, 1489, 1555, 2302, 2441, 2540, 3402 |
| MbiI | CCGCTC | 1 cut(s) | 3151 |
| MfeI | CAATTG | 5 cut(s) | 1179, 2840, 3158, 3171, 3429 |
| MflI | RGATCY | 3 cut(s) | 366, 1057, 2611 |
| MhlI | GDGCHC | 7 cut(s) | 502, 635, 748, 1109, 1248, 1623, 2882 |
| MlsI | TGGCCA | 2 cut(s) | 1334, 2640 |
| MluNI | TGGCCA | 2 cut(s) | 1334, 2640 |
| MlyI | GAGTC | 6 cut(s) | 178, 881, 1112, 2336, 3122, 3131 |
| MmeI | TCCRAC | 4 cut(s) | 1244, 2772, 3105, 3295 |
| Mox20I | TGGCCA | 2 cut(s) | 1334, 2640 |
| Mph1103I | ATGCAT | 4 cut(s) | 611, 1729, 1827, 2244 |
| MroNI | GCCGGC | 2 cut(s) | 88, 193 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3358 |
| MscI | TGGCCA | 2 cut(s) | 1334, 2640 |
| MseI | TTAA | 7 cut(s) | 222, 647, 1233, 2024, 2408, 2714, 2871 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1258 |
| Msp20I | TGGCCA | 2 cut(s) | 1334, 2640 |
| MspA1I | CMGCKG | 1 cut(s) | 3138 |
| MspI | CCGG | 6 cut(s) | 26, 49, 89, 194, 218, 2221 |
| MspR9I | CCNGG | 3 cut(s) | 49, 2221, 2370 |
| MunI | CAATTG | 5 cut(s) | 1179, 2840, 3158, 3171, 3429 |
| Mva1269I | GAATGC | 1 cut(s) | 611 |
| MvaI | CCWGG | 1 cut(s) | 2370 |
| NaeI | GCCGGC | 2 cut(s) | 90, 195 |
| NciI | CCSGG | 2 cut(s) | 49, 2221 |
| NdeI | CATATG | 2 cut(s) | 1888, 3346 |
| NgoMIV | GCCGGC | 2 cut(s) | 88, 193 |
| NlaIV | GGNNCC | 5 cut(s) | 47, 1621, 1841, 2881, 3099 |
| NmuCI | GTSAC | 5 cut(s) | 1079, 1115, 2441, 2540, 3402 |
| NotI | GCGGCCGC | 1 cut(s) | 198 |
| NsiI | ATGCAT | 4 cut(s) | 611, 1729, 1827, 2244 |
| NspI | RCATGY | 4 cut(s) | 411, 613, 2231, 3058 |
| NspV | TTCGAA | 2 cut(s) | 413, 1810 |
| PaeI | GCATGC | 1 cut(s) | 613 |
| PaeR7I | CTCGAG | 1 cut(s) | 3476 |
| PagI | TCATGA | 3 cut(s) | 601, 748, 2143 |
| PceI | AGGCCT | 1 cut(s) | 2999 |
| PciI | ACATGT | 2 cut(s) | 2227, 3054 |
| PctI | GAATGC | 1 cut(s) | 611 |
| PdiI | GCCGGC | 2 cut(s) | 90, 195 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3358 |
| PfeI | GAWTC | 9 cut(s) | 8, 1010, 2195, 2264, 2471, 2798, 2933, 3089, 3444 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 983, 1411 |
| PfoI | TCCNGGA | 1 cut(s) | 2368 |
| Ple19I | CGATCG | 1 cut(s) | 251 |
| PleI | GAGTC | 6 cut(s) | 177, 880, 1112, 2336, 3122, 3130 |
| PpsI | GAGTC | 6 cut(s) | 177, 880, 1112, 2336, 3122, 3130 |
| PscI | ACATGT | 2 cut(s) | 2227, 3054 |
| PsiI | TTATAA | 1 cut(s) | 1101 |
| Psp124BI | GAGCTC | 1 cut(s) | 1248 |
| Psp6I | CCWGG | 1 cut(s) | 2368 |
| PspFI | CCCAGC | 1 cut(s) | 3177 |
| PspGI | CCWGG | 1 cut(s) | 2368 |
| PspN4I | GGNNCC | 5 cut(s) | 47, 1621, 1841, 2881, 3099 |
| PspOMI | GGGCCC | 1 cut(s) | 1619 |
| PspPI | GGNCC | 6 cut(s) | 45, 305, 593, 1175, 1619, 1620 |
| PspXI | VCTCGAGB | 1 cut(s) | 3476 |
| PstI | CTGCAG | 3 cut(s) | 1201, 1747, 2416 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1930, 2168, 3050 |
| PsuI | RGATCY | 3 cut(s) | 366, 1057, 2611 |
| PvuI | CGATCG | 1 cut(s) | 251 |
| PvuII | CAGCTG | 1 cut(s) | 3138 |
| RsaI | GTAC | 6 cut(s) | 262, 971, 1396, 2203, 2928, 3435 |
| RsaNI | GTAC | 6 cut(s) | 261, 970, 1395, 2202, 2927, 3434 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1258 |
| SacI | GAGCTC | 1 cut(s) | 1248 |
| SalI | GTCGAC | 1 cut(s) | 67 |
| SaqAI | TTAA | 7 cut(s) | 222, 647, 1233, 2024, 2408, 2714, 2871 |
| Sau96I | GGNCC | 6 cut(s) | 45, 305, 593, 1175, 1619, 1620 |
| SchI | GAGTC | 6 cut(s) | 178, 881, 1112, 2336, 3122, 3131 |
| ScrFI | CCNGG | 3 cut(s) | 49, 2221, 2370 |
| SduI | GDGCHC | 7 cut(s) | 502, 635, 748, 1109, 1248, 1623, 2882 |
| SfcI | CTRYAG | 4 cut(s) | 1197, 1743, 2298, 2412 |
| Sfr274I | CTCGAG | 1 cut(s) | 3476 |
| SfuI | TTCGAA | 2 cut(s) | 413, 1810 |
| SinI | GGWCC | 3 cut(s) | 45, 305, 593 |
| SlaI | CTCGAG | 1 cut(s) | 3476 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1258 |
| SmlI | CTYRAG | 2 cut(s) | 1775, 3476 |
| SmoI | CTYRAG | 2 cut(s) | 1775, 3476 |
| SpeI | ACTAGT | 1 cut(s) | 578 |
| SphI | GCATGC | 1 cut(s) | 613 |
| SseBI | AGGCCT | 1 cut(s) | 2999 |
| SspI | AATATT | 3 cut(s) | 624, 1629, 2777 |
| SspMI | CTAG | 5 cut(s) | 579, 666, 927, 2771, 3632 |
| SstI | GAGCTC | 1 cut(s) | 1248 |
| StuI | AGGCCT | 1 cut(s) | 2999 |
| StyD4I | CCNGG | 3 cut(s) | 47, 2219, 2368 |
| StyI | CCWWGG | 4 cut(s) | 1843, 1946, 2332, 3201 |
| TaiI | ACGT | 4 cut(s) | 1557, 1576, 2671, 3255 |
| TaqI | TCGA | 8 cut(s) | 68, 413, 450, 1810, 2499, 2673, 3477, 3540 |
| TatI | WGTACW | 2 cut(s) | 260, 2926 |
| TauI | GCSGC | 5 cut(s) | 16, 200, 203, 217, 2862 |
| TfiI | GAWTC | 9 cut(s) | 8, 1010, 2195, 2264, 2471, 2798, 2933, 3089, 3444 |
| Tru1I | TTAA | 7 cut(s) | 222, 647, 1233, 2024, 2408, 2714, 2871 |
| Tru9I | TTAA | 7 cut(s) | 222, 647, 1233, 2024, 2408, 2714, 2871 |
| TseFI | GTSAC | 5 cut(s) | 1079, 1115, 2441, 2540, 3402 |
| TseI | GCWGC | 9 cut(s) | 886, 1199, 1340, 1586, 1742, 1930, 2174, 2856, 2981 |
| Tsp45I | GTSAC | 5 cut(s) | 1079, 1115, 2441, 2540, 3402 |
| TspGWI | ACGGA | 1 cut(s) | 379 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 983, 1411 |
| VneI | GTGCAC | 1 cut(s) | 1105 |
| VpaK11BI | GGWCC | 3 cut(s) | 45, 305, 593 |
| XapI | RAATTY | 5 cut(s) | 649, 1316, 2420, 2734, 3358 |
| XbaI | TCTAGA | 1 cut(s) | 2770 |
| XceI | RCATGY | 4 cut(s) | 411, 613, 2231, 3058 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 980, 2330 |
| XhoI | CTCGAG | 1 cut(s) | 3476 |
| XmiI | GTMKAC | 2 cut(s) | 68, 2159 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3358 |
| XspI | CTAG | 5 cut(s) | 579, 666, 927, 2771, 3632 |
| Zsp2I | ATGCAT | 4 cut(s) | 611, 1729, 1827, 2244 |