Rh6AG366100
ERF Family

superfamily. Protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0006838
Physical Location & Seq
Forward (+)
56462822 .. 56471379
8558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG366100.1

Sequence Viewer

Length: 3567 bp
ATGGACGAATCGCCGCAGAAATCTCCGGCGACGCCGAAACGGCGGACCCGGCGGAGACTGGTGCAGTCGACGCTGGTTCTTGTGAAGCCGGCGGAGCCGGTGGAGAACGGCGATCCGAAGAAGGAGAATAGCGAAGAGAAGAACGATCAGGATGAGGAGTTCTGCGGGAGTCAGAGCAAGAGGAAGAGGAAGCCGGCGGCGGCCAAGAAGACGCCGCCGGTTAAAGCTCCTAAGAAGAACGGTAAGCGATCGGCGAATAGTACACCGACGAAGAAGAATGGAAAAGATGTGGTGGTTGAAGATGGACCTCTGATAATGCCTGATTTGAGATTAGAGGCCAAATTGAGAAGCGAGGAAATCTCACGGATCTGGACGAAGGAAGGAAGGCAATTACATCCCTTTTTTGCATGTTCGAAAGCGGGGAAGAAAAGTCAGGAGGCAACTGAAGTCGAGGGCAGTTCAAGCTTCATGGGGAGTAAGGAGAAATATATTACTTGTGCCCCAATTCATGTGTTTGAAGATACTCAGGACGATGCTGTGTTTCTTGATTGGAGAAATTGGACATTTTGTGAGGAAACTAGTCTGACAAGTGGTCCTCATCATGAATGCATGCAGTCCTCAATATTTGAGTGCTCTGTTGAGTGCTTAAATTTTGATAAGGTTTCTAGTGTTTCCCAACCATGCAAATCATCAACTTTTCAAAACACAGCCTCTTTATATCAGTGTCGTATTCAACAGGAATGTGCTCATGAAACATCATCCACAGTCCCTCAGTTTTTGCCTAATGAGCAAATGAGGTGCTATCAGCACTCAAAGGAAGTAGAGGATTGTGAGGGTGGTTTGTTTTCTGGGCATACTGGTTGCATGAAGGAGTCAGATATTGAGCAGCAGAATGCATTTCTGGAGGAAAGGATGTCAAACAATCCTGGTTGCTGTGATCACTCTGAGAATAGCTTATGGACATATAAGTACCAGCCAAAGAATGGCAGGGAGGTATGTGGTAATAATGAATCTGTGAGGTTTTTGAGTGAGTGGCTTCGTTCTTGGTATGAACGAGATCTTCAAACCAGTGAAGATGGTGACAGGCAAGGCATTGATTATAAGTGCACTCAAAGTGACTCAGAAAGTGAAGATGATGAGGTCTTGAAGAAAAAGAATGTTCTGTTAGTTACAGGGCCAATTGGGAGTGGAAAGTCTGCAGCTATATATGCGTGTGCAAAAGAACAAGGGATTAAGGTTTTGGAGCTCAGTGCATCAGAGTGTCGGACTGGAGCTACTGTAAAACAGAAGTTTGGAGAGGCGTTCAAATCTCGCAAATTTCAAAGATCAGTGGCCAATGCTGCTGGTTCACAGAACAAGCTTATTATGAAGTCTCGCTTTGTTGAGGCTAATGGTACGACAGGCCAAGACTTGGATGATGATGATGATGATCTTGTTGAACTGATACCCATATCAGATGAAGAAAGTCATGATGCTACTGGAGCTTCTGTAACATTTGCCTTCAAGGAGGACTGTTGCAAAGATAAACTTGTTATACTTTTTGAGGATGTGGACATTACTTTTCAAGAAGAACGTGGTTTTATTGCAGCAATTCAGCAGATAGCTAAAACAGCGAATGGGCCCATAATATTGACCAGCAATAGTCCAAAACCTGACCTGCCAGACAGTTTTGATAGATTACAAGTGCATTTCATGTTGCCATCATCAGTGGAGCTGTATTCCCATGCATATATGGTTTGTGCTGCAGAGAGAGCCAGCATACAGCCCTATTTACTTGAGCGATTTATTGAATGTTGTGGAGGAGATATTCGAAAAATTATAATGCATCTTCAGTTCTGGTGCCAAGGAAGAAGTTTTAGAAAAGATACAAAAATGATGCGAGAGACGTATGGTTCAGTGCTATTTGATGTTGAGGCTGGTCATCAGATGCTGCCAAAATTATTACCTTGGGATTTACCTTCTCAGTTATCTGATTTAGTAGAGAAAGAGATAACCAAGTCATTATCAATGATGGAAGAAGGTTTAAGCCCAATGGAGGTAGATGACAATACAGAAGTGCAATGTAGTTTGAACATGGCTTATAGTGAAATGGAAAATATGGAGGCCAAGAAGGTAGCAATGCTGAGCAGGAATGGCTATACTCATGAGTGCAGTGAGTATACAGCAACTGATGCTGCTCCCGACTTTTCTAATGATTCAAGTACCTCATTTCCTTTCCCCCGGCGACATGTTCGGAGGATGCATGGTGTTATATTGTCATCTGATTCTGAAGATGACTTTACGAAGAATGGATATCCTACAGTTACAGATAAAGATACTAACCATGAAATCCTTGGAGCTGACTCATTATCAGAGATGCTGCTTTTTCCTGGAGTGACAAATATAGATAGAGGACTTTATAACTGTTTAACTGCAGATGAATTTCACACAAGTGAAATGTGCAACTTTGCAGATATATCCTGTGTGCCAGAATCGTCTTTTGTTCCTGAAACTCAAATGGATAATGAAACAAATTTCTTATCTCAAACAATGTCTTCTGGTCACTTTGCAACAGCTATAAACGAAGTATTTTTGGGCGATGAATTACCAGTTGAAGACAATAATGAAATAGATCTGTTATCTCAAACAGTGTCTTCTGGCCATTTTGCTAACACCATGAATGAAGTACGTTTTGATGAAGAATTACCTGTTGAAGACAACAATCCTGCTCAATTAAAATCAGGATTACAGATAAATTTTGATAAGGTGGGAAATAATTGTGATGCCATTCTAGAATATTCTCATCAGGAGTTGGAAGATTCTCAAAGTGAACATGGGGAGACTGTTGCAAGAGCTTATCAATTGATGGATGAGTGCAGCCGCATGGATTTTAATAAGGGCTCCAAGTTTTTACAGGAGAAAAAAACCTCAGCAGTCAGTGATCTTGTACAAGATTCATGGAACAAACTTCGTGGATGGCGCAATGATCTAAGGCAGTATGCTGCATCAGAACAAGAGGCCTCTCAGATTGTTATGCTTGCTTATAGAATGAGCAATTTGATCTCGGAAACTGACATGTTGTTTTCTAAATGCCAACCACTAATGAGTGATTCTGTGGAACCATCAATGATCTTCTCGGATGAGTCAGATTCATTCAGCTGGTGTGATGAGCGGTTGCAATTGGCATCCACAATTGCCCAGCATGGATTTTGCTTCTATGCCAAGGGCATTTCTTCTGTAGGATCAAATGTAGGTTGTGTGAGGAGAGTGGACGTGGATATAGCCTCTGAGATGTTGGCTAACACAACTACTATGATGGCCTTAGGTAAGTTAGTTGGACAGGGTATGAGAACAAGTAAGACATCATATGCTGGAAGAAATTCAGAGATTAGTCAGCCAAATGTGATTACAAGTGAAATCAAGTCACATATATTTGATGCAATCCAGTCAATTGTACCTTCCAGATTCAACTTGACATTGAGAGGCAGTGCATACCTCGAGTATCTTTCCTCACTTCGCCACATTTCAAGATCAGAAGCTTCTCGTTTGTCAAAAGGCGTCGAGATGACCACAAGAAGAAGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0001775 GO:0002200 GO:0002204 GO:0002208 GO:0002250 GO:0002252 GO:0002263 GO:0002285 GO:0002312 GO:0002366 GO:0002376 GO:0002377 GO:0002381 GO:0002440 GO:0002443 GO:0002449 GO:0002460 GO:0002520 GO:0002562 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006310 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006955 GO:0006974 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0008283 GO:0008284 GO:0008630 GO:0009058 GO:0009059 GO:0009893 GO:0009966 GO:0009968 GO:0009987 GO:0010564 GO:0010604 GO:0010646 GO:0010648 GO:0010941 GO:0012501 GO:0016064 GO:0016444 GO:0016445 GO:0016447 GO:0019219 GO:0019222 GO:0019724 GO:0022402 GO:0023051 GO:0023052 GO:0023057 GO:0030888 GO:0030890 GO:0031323 GO:0031325 GO:0032501 GO:0032502 GO:0032943 GO:0032944 GO:0032946 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0035556 GO:0042100 GO:0042113 GO:0042127 GO:0042770 GO:0042771 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045190 GO:0045191 GO:0045321 GO:0045830 GO:0045911 GO:0045935 GO:0046483 GO:0046649 GO:0046651 GO:0048302 GO:0048304 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048731 GO:0048856 GO:0050670 GO:0050671 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051249 GO:0051251 GO:0051716 GO:0051726 GO:0060255 GO:0060548 GO:0065007 GO:0070661 GO:0070663 GO:0070665 GO:0071704 GO:0072331 GO:0072332 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097190 GO:0097193 GO:1901360 GO:1901576 GO:1901796 GO:1901797 GO:1901987 GO:1901990 GO:1902165 GO:1902166 GO:1902229 GO:1902230 GO:1902253 GO:1902254 GO:1902531 GO:1902532 GO:2000026 GO:2001020 GO:2001021 GO:2001233 GO:2001234 GO:2001242 GO:2001243
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA Rad17

Protein Analysis

1188

Amino Acids

133.39

Weight (kDa)

5.01

Isoelectric Point (pI)

55.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1101, 1820, 2400
Acc36I ACCTGC 1 cut(s) 1665
AccB1I GGYRCC 1 cut(s) 1839
AccB7I CCANNNNNTGG 2 cut(s) 983, 1411
AccBSI CCGCTC 1 cut(s) 3151
AccI GTMKAC 2 cut(s) 68, 2159
AclWI GGATC 3 cut(s) 107, 374, 3229
AcoI YGGCCR 3 cut(s) 201, 1332, 2638
AcsI RAATTY 6 cut(s) 649, 1316, 2420, 2512, 2734, 3358
AcuI CTGAAG 3 cut(s) 465, 1814, 2289
AcyI GRCGYC 3 cut(s) 32, 212, 3537
AfaI GTAC 7 cut(s) 262, 971, 1396, 2203, 2667, 2928, 3435
AfiI CCNNNNNNNGG 3 cut(s) 983, 1411, 2035
AflIII ACRYGT 2 cut(s) 2227, 3054
AhdI GACNNNNNGTC 1 cut(s) 591
AhlI ACTAGT 1 cut(s) 578
AjiI CACGTC 1 cut(s) 3253
AjnI CCWGG 2 cut(s) 925, 2368
AleI CACNNNNGTG 1 cut(s) 2430
AloI GAACNNNNNNTCC 2 cut(s) 143, 175
Alw21I GWGCWC 4 cut(s) 635, 748, 1109, 1248
Alw26I GTCTC 4 cut(s) 49, 1377, 1877, 2813
Alw44I GTGCAC 1 cut(s) 1105
AlwI GGATC 3 cut(s) 107, 374, 3229
AlwNI CAGNNNCTG 2 cut(s) 1930, 2168
Ama87I CYCGRG 1 cut(s) 3476
ApaI GGGCCC 1 cut(s) 1623
ApaLI GTGCAC 1 cut(s) 1105
ApoI RAATTY 6 cut(s) 649, 1316, 2420, 2512, 2734, 3358
Asp700I GAANNNNTTC 1 cut(s) 3358
AspLEI GCGC 1 cut(s) 2961
AspS9I GGNCC 6 cut(s) 45, 305, 593, 1175, 1619, 1620
AsuC2I CCSGG 2 cut(s) 49, 2221
AsuHPI GGTGA 1 cut(s) 1091
AsuII TTCGAA 2 cut(s) 413, 1810
AvaI CYCGRG 1 cut(s) 3476
AvaII GGWCC 3 cut(s) 45, 305, 593
AxyI CCTNAGG 1 cut(s) 3301
BaeGI GKGCMC 3 cut(s) 502, 1109, 1623
BalI TGGCCA 2 cut(s) 1334, 2640
BanI GGYRCC 1 cut(s) 1839
BanII GRGCYC 3 cut(s) 1248, 1623, 2882
BbsI GAAGAC 5 cut(s) 215, 2526, 2601, 2625, 2700
Bbv12I GWGCWC 4 cut(s) 635, 748, 1109, 1248
BbvCI CCTCAGC 1 cut(s) 2908
BccI CCATC 8 cut(s) 296, 1070, 1708, 2005, 2839, 2949, 3109, 3289
BceAI ACGGC 2 cut(s) 56, 124
BciT130I CCWGG 2 cut(s) 927, 2370
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 2 cut(s) 49, 2221
BcoDI GTCTC 4 cut(s) 49, 1377, 1877, 2813
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 3 cut(s) 579, 666, 2771
BfmI CTRYAG 5 cut(s) 1197, 1743, 2298, 2412, 3216
BfuAI ACCTGC 1 cut(s) 1665
BglI GCCNNNNNGGC 1 cut(s) 40
BglII AGATCT 2 cut(s) 1057, 2611
BlpI GCTNAGC 1 cut(s) 2123
Bme1390I CCNGG 4 cut(s) 49, 927, 2221, 2370
Bme18I GGWCC 3 cut(s) 45, 305, 593
BmeRI GACNNNNNGTC 1 cut(s) 591
BmeT110I CYCGRG 1 cut(s) 3476
BmgBI CACGTC 1 cut(s) 3253
BmgT120I GGNCC 6 cut(s) 45, 305, 593, 1175, 1619, 1620
BmiI GGNNCC 6 cut(s) 47, 96, 1621, 1841, 2881, 3099
BmrFI CCNGG 4 cut(s) 49, 927, 2221, 2370
BpiI GAAGAC 5 cut(s) 215, 2526, 2601, 2625, 2700
BplI GAGNNNNNCTC 2 cut(s) 344, 376
BpmI CTGGAG 4 cut(s) 923, 1290, 1500, 2391
Bpu10I CCTNAGC 1 cut(s) 2908
Bpu1102I GCTNAGC 1 cut(s) 2123
Bpu14I TTCGAA 2 cut(s) 413, 1810
BpuEI CTTGAG 1 cut(s) 1796
BpuMI CCSGG 2 cut(s) 49, 2221
BsaBI GATNNNNATC 1 cut(s) 1428
BsaHI GRCGYC 3 cut(s) 32, 212, 3537
BsaJI CCNNGG 5 cut(s) 1843, 1946, 2219, 2332, 3201
BsaXI ACNNNNNCTCC 4 cut(s) 1263, 1293, 1473, 1503
Bsc4I CCNNNNNNNGG 3 cut(s) 983, 1411, 2035
Bse118I RCCGGY 4 cut(s) 88, 97, 193, 217
Bse1I ACTGG 7 cut(s) 63, 862, 1068, 1273, 1483, 2588, 3424
Bse21I CCTNAGG 1 cut(s) 3301
Bse3DI GCAATG 3 cut(s) 2066, 2124, 2968
Bse8I GATNNNNATC 1 cut(s) 1428
BseBI CCWGG 2 cut(s) 927, 2370
BseDI CCNNGG 5 cut(s) 1843, 1946, 2219, 2332, 3201
BseJI GATNNNNATC 1 cut(s) 1428
BseLI CCNNNNNNNGG 3 cut(s) 983, 1411, 2035
BseMI GCAATG 3 cut(s) 2066, 2124, 2968
BseNI ACTGG 7 cut(s) 63, 862, 1068, 1273, 1483, 2588, 3424
BseRI GAGGAG 3 cut(s) 170, 1815, 3256
BseSI GKGCMC 3 cut(s) 502, 1109, 1623
BseYI CCCAGC 1 cut(s) 3177
BsgI GTGCAG 3 cut(s) 83, 2170, 2875
Bsh1285I CGRYCG 1 cut(s) 251
BshNI GGYRCC 1 cut(s) 1839
BsiEI CGRYCG 1 cut(s) 251
BsiHKAI GWGCWC 4 cut(s) 635, 748, 1109, 1248
BsiHKCI CYCGRG 1 cut(s) 3476
BsiSI CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2221
BslFI GGGAC 1 cut(s) 752
BslI CCNNNNNNNGG 3 cut(s) 983, 1411, 2035
BsmAI GTCTC 4 cut(s) 49, 1377, 1877, 2813
BsmBI CGTCTC 1 cut(s) 1877
BsmFI GGGAC 1 cut(s) 752
BsmI GAATGC 2 cut(s) 611, 898
BsoBI CYCGRG 1 cut(s) 3476
Bsp119I TTCGAA 2 cut(s) 413, 1810
Bsp120I GGGCCC 1 cut(s) 1619
Bsp1286I GDGCHC 7 cut(s) 502, 635, 748, 1109, 1248, 1623, 2882
Bsp1407I TGTACA 1 cut(s) 2926
Bsp1720I GCTNAGC 1 cut(s) 2123
BspHI TCATGA 4 cut(s) 601, 748, 1468, 2143
BspLI GGNNCC 6 cut(s) 47, 96, 1621, 1841, 2881, 3099
BspMAI CTGCAG 3 cut(s) 1201, 1747, 2416
BspMI ACCTGC 1 cut(s) 1665
BspPI GGATC 3 cut(s) 107, 374, 3229
BspT104I TTCGAA 2 cut(s) 413, 1810
BspT107I GGYRCC 1 cut(s) 1839
BsrBI CCGCTC 1 cut(s) 3151
BsrDI GCAATG 3 cut(s) 2066, 2124, 2968
BsrFI RCCGGY 4 cut(s) 88, 97, 193, 217
BsrGI TGTACA 1 cut(s) 2926
BsrI ACTGG 7 cut(s) 63, 862, 1068, 1273, 1483, 2588, 3424
BssAI RCCGGY 4 cut(s) 88, 97, 193, 217
BssECI CCNNGG 5 cut(s) 1843, 1946, 2219, 2332, 3201
BssNAI GTATAC 1 cut(s) 2160
BssNI GRCGYC 3 cut(s) 32, 212, 3537
BssT1I CCWWGG 4 cut(s) 1843, 1946, 2332, 3201
Bst1107I GTATAC 1 cut(s) 2160
Bst2UI CCWGG 2 cut(s) 927, 2370
Bst4CI ACNGT 9 cut(s) 242, 766, 1279, 1514, 1667, 2302, 2405, 2629, 2824
Bst6I CTCTTC 2 cut(s) 129, 179
BstACI GRCGYC 3 cut(s) 32, 212, 3537
BstAPI GCANNNNNTGC 1 cut(s) 2171
BstAUI TGTACA 1 cut(s) 2926
BstBI TTCGAA 2 cut(s) 413, 1810
BstC8I GCNNGC 5 cut(s) 90, 195, 611, 1756, 3018
BstHHI GCGC 1 cut(s) 2961
BstMAI GTCTC 4 cut(s) 49, 1377, 1877, 2813
BstMCI CGRYCG 1 cut(s) 251
BstNI CCWGG 2 cut(s) 927, 2370
BstNSI RCATGY 4 cut(s) 411, 613, 2231, 3058
BstSCI CCNGG 4 cut(s) 47, 925, 2219, 2368
BstSFI CTRYAG 5 cut(s) 1197, 1743, 2298, 2412, 3216
BstSLI GKGCMC 3 cut(s) 502, 1109, 1623
BstV2I GAAGAC 5 cut(s) 215, 2526, 2601, 2625, 2700
BstX2I RGATCY 3 cut(s) 366, 1057, 2611
BstYI RGATCY 3 cut(s) 366, 1057, 2611
BstZ17I GTATAC 1 cut(s) 2160
Bsu36I CCTNAGG 1 cut(s) 3301
BtgZI GCGATG 1 cut(s) 2592
BtrI CACGTC 1 cut(s) 3253
BtsI GCAGTG 2 cut(s) 2158, 3472
BveI ACCTGC 1 cut(s) 1665
Cac8I GCNNGC 5 cut(s) 90, 195, 611, 1756, 3018
CaiI CAGNNNCTG 2 cut(s) 1930, 2168
CciI TCATGA 4 cut(s) 601, 748, 1468, 2143
CfoI GCGC 1 cut(s) 2961
Cfr10I RCCGGY 4 cut(s) 88, 97, 193, 217
Cfr13I GGNCC 6 cut(s) 45, 305, 593, 1175, 1619, 1620
CseI GACGC 4 cut(s) 40, 79, 220, 3526
Csp6I GTAC 7 cut(s) 261, 970, 1395, 2202, 2666, 2927, 3434
CspCI CAANNNNNGTGG 2 cut(s) 2932, 2967
CviQI GTAC 7 cut(s) 261, 970, 1395, 2202, 2666, 2927, 3434
DriI GACNNNNNGTC 1 cut(s) 591
EaeI YGGCCR 3 cut(s) 201, 1332, 2638
Eam1104I CTCTTC 2 cut(s) 129, 179
Eam1105I GACNNNNNGTC 1 cut(s) 591
EarI CTCTTC 2 cut(s) 129, 179
EciI GGCGGA 3 cut(s) 58, 67, 107
Ecl136II GAGCTC 1 cut(s) 1246
Eco130I CCWWGG 4 cut(s) 1843, 1946, 2332, 3201
Eco147I AGGCCT 1 cut(s) 2999
Eco24I GRGCYC 3 cut(s) 1248, 1623, 2882
Eco32I GATATC 1 cut(s) 2294
Eco47I GGWCC 3 cut(s) 45, 305, 593
Eco53kI GAGCTC 1 cut(s) 1246
Eco57I CTGAAG 3 cut(s) 465, 1814, 2289
Eco81I CCTNAGG 1 cut(s) 3301
Eco88I CYCGRG 1 cut(s) 3476
EcoICRI GAGCTC 1 cut(s) 1246
EcoRII CCWGG 2 cut(s) 925, 2368
EcoRV GATATC 1 cut(s) 2294
EcoT14I CCWWGG 4 cut(s) 1843, 1946, 2332, 3201
EcoT22I ATGCAT 5 cut(s) 611, 898, 1729, 1827, 2244
EcoT38I GRGCYC 3 cut(s) 1248, 1623, 2882
ErhI CCWWGG 4 cut(s) 1843, 1946, 2332, 3201
Esp3I CGTCTC 1 cut(s) 1877
FalI AAGNNNNNCTT 4 cut(s) 1361, 1393, 1512, 1544
FaqI GGGAC 1 cut(s) 752
FauI CCCGC 2 cut(s) 158, 412
FauNDI CATATG 1 cut(s) 3346
FbaI TGATCA 1 cut(s) 937
FblI GTMKAC 2 cut(s) 68, 2159
FriOI GRGCYC 3 cut(s) 1248, 1623, 2882
FspBI CTAG 3 cut(s) 579, 666, 2771
GlaI GCGC 1 cut(s) 2960
GsaI CCCAGC 1 cut(s) 3181
GsuI CTGGAG 4 cut(s) 923, 1290, 1500, 2391
HapII CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2221
HgaI GACGC 4 cut(s) 40, 79, 220, 3526
HhaI GCGC 1 cut(s) 2961
Hin1I GRCGYC 3 cut(s) 32, 212, 3537
Hin6I GCGC 1 cut(s) 2959
HinP1I GCGC 1 cut(s) 2959
HincII GTYRAC 1 cut(s) 69
HindII GTYRAC 1 cut(s) 69
HindIII AAGCTT 3 cut(s) 463, 1358, 3516
HpaII CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2221
HphI GGTGA 1 cut(s) 1091
Hpy166II GTNNAC 8 cut(s) 69, 263, 1107, 1349, 1552, 2160, 2810, 3250
Hpy8I GTNNAC 8 cut(s) 69, 263, 1107, 1349, 1552, 2160, 2810, 3250
Hpy99I CGWCG 4 cut(s) 34, 73, 271, 3542
HpyCH4III ACNGT 9 cut(s) 242, 766, 1279, 1514, 1667, 2302, 2405, 2629, 2824
HpyCH4IV ACGT 4 cut(s) 1573, 1886, 2668, 3252
HpySE526I ACGT 4 cut(s) 1573, 1886, 2668, 3252
Hsp92I GRCGYC 3 cut(s) 32, 212, 3537
HspAI GCGC 1 cut(s) 2959
KroI GCCGGC 2 cut(s) 88, 193
KroNI GCCGGC 2 cut(s) 90, 195
Ksp22I TGATCA 1 cut(s) 937
LmnI GCTCC 9 cut(s) 94, 232, 1243, 1271, 1481, 1711, 2182, 2336, 2885
MaeI CTAG 3 cut(s) 579, 666, 2771
MaeII ACGT 4 cut(s) 1573, 1886, 2668, 3252
MaeIII GTNAC 8 cut(s) 1079, 1115, 1168, 1489, 2302, 2374, 2540, 3402
MbiI CCGCTC 1 cut(s) 3151
MfeI CAATTG 5 cut(s) 1179, 2840, 3158, 3171, 3429
MflI RGATCY 3 cut(s) 366, 1057, 2611
MhlI GDGCHC 7 cut(s) 502, 635, 748, 1109, 1248, 1623, 2882
MlsI TGGCCA 2 cut(s) 1334, 2640
MluNI TGGCCA 2 cut(s) 1334, 2640
MlyI GAGTC 5 cut(s) 178, 881, 1112, 2336, 3131
MmeI TCCRAC 3 cut(s) 1244, 2772, 3295
Mox20I TGGCCA 2 cut(s) 1334, 2640
Mph1103I ATGCAT 5 cut(s) 611, 898, 1729, 1827, 2244
MroNI GCCGGC 2 cut(s) 88, 193
MroXI GAANNNNTTC 1 cut(s) 3358
MscI TGGCCA 2 cut(s) 1334, 2640
MseI TTAA 7 cut(s) 222, 647, 1233, 2024, 2408, 2714, 2871
MslI CAYNNNNRTG 2 cut(s) 1258, 2430
Msp20I TGGCCA 2 cut(s) 1334, 2640
MspA1I CMGCKG 1 cut(s) 3138
MspI CCGG 7 cut(s) 26, 49, 89, 98, 194, 218, 2221
MspR9I CCNGG 4 cut(s) 49, 927, 2221, 2370
MunI CAATTG 5 cut(s) 1179, 2840, 3158, 3171, 3429
Mva1269I GAATGC 2 cut(s) 611, 898
MvaI CCWGG 2 cut(s) 927, 2370
NaeI GCCGGC 2 cut(s) 90, 195
NciI CCSGG 2 cut(s) 49, 2221
NdeI CATATG 1 cut(s) 3346
NgoMIV GCCGGC 2 cut(s) 88, 193
NlaIV GGNNCC 6 cut(s) 47, 96, 1621, 1841, 2881, 3099
NmuCI GTSAC 5 cut(s) 1079, 1115, 2374, 2540, 3402
NsiI ATGCAT 5 cut(s) 611, 898, 1729, 1827, 2244
NspI RCATGY 4 cut(s) 411, 613, 2231, 3058
NspV TTCGAA 2 cut(s) 413, 1810
OliI CACNNNNGTG 1 cut(s) 2430
PaeI GCATGC 1 cut(s) 613
PaeR7I CTCGAG 1 cut(s) 3476
PagI TCATGA 4 cut(s) 601, 748, 1468, 2143
PceI AGGCCT 1 cut(s) 2999
PciI ACATGT 2 cut(s) 2227, 3054
PctI GAATGC 2 cut(s) 611, 898
PdiI GCCGGC 2 cut(s) 90, 195
PdmI GAANNNNTTC 1 cut(s) 3358
PflMI CCANNNNNTGG 2 cut(s) 983, 1411
PfoI TCCNGGA 1 cut(s) 2368
Ple19I CGATCG 1 cut(s) 251
PleI GAGTC 5 cut(s) 177, 880, 1112, 2336, 3130
PpsI GAGTC 5 cut(s) 177, 880, 1112, 2336, 3130
PscI ACATGT 2 cut(s) 2227, 3054
PsiI TTATAA 3 cut(s) 1101, 1820, 2400
Psp124BI GAGCTC 1 cut(s) 1248
Psp6I CCWGG 2 cut(s) 925, 2368
PspFI CCCAGC 1 cut(s) 3177
PspGI CCWGG 2 cut(s) 925, 2368
PspN4I GGNNCC 6 cut(s) 47, 96, 1621, 1841, 2881, 3099
PspOMI GGGCCC 1 cut(s) 1619
PspPI GGNCC 6 cut(s) 45, 305, 593, 1175, 1619, 1620
PspXI VCTCGAGB 1 cut(s) 3476
PstI CTGCAG 3 cut(s) 1201, 1747, 2416
PstNI CAGNNNCTG 2 cut(s) 1930, 2168
PsuI RGATCY 3 cut(s) 366, 1057, 2611
PvuI CGATCG 1 cut(s) 251
PvuII CAGCTG 1 cut(s) 3138
RsaI GTAC 7 cut(s) 262, 971, 1396, 2203, 2667, 2928, 3435
RsaNI GTAC 7 cut(s) 261, 970, 1395, 2202, 2666, 2927, 3434
RseI CAYNNNNRTG 2 cut(s) 1258, 2430
SacI GAGCTC 1 cut(s) 1248
SalI GTCGAC 1 cut(s) 67
SaqAI TTAA 7 cut(s) 222, 647, 1233, 2024, 2408, 2714, 2871
Sau96I GGNCC 6 cut(s) 45, 305, 593, 1175, 1619, 1620
SchI GAGTC 5 cut(s) 178, 881, 1112, 2336, 3131
ScrFI CCNGG 4 cut(s) 49, 927, 2221, 2370
SduI GDGCHC 7 cut(s) 502, 635, 748, 1109, 1248, 1623, 2882
SfcI CTRYAG 5 cut(s) 1197, 1743, 2298, 2412, 3216
Sfr274I CTCGAG 1 cut(s) 3476
SfuI TTCGAA 2 cut(s) 413, 1810
SinI GGWCC 3 cut(s) 45, 305, 593
SlaI CTCGAG 1 cut(s) 3476
SmiMI CAYNNNNRTG 2 cut(s) 1258, 2430
SmlI CTYRAG 2 cut(s) 1775, 3476
SmoI CTYRAG 2 cut(s) 1775, 3476
SpeI ACTAGT 1 cut(s) 578
SphI GCATGC 1 cut(s) 613
SseBI AGGCCT 1 cut(s) 2999
SspI AATATT 3 cut(s) 624, 1629, 2777
SspMI CTAG 3 cut(s) 579, 666, 2771
SstI GAGCTC 1 cut(s) 1248
StuI AGGCCT 1 cut(s) 2999
StyD4I CCNGG 4 cut(s) 47, 925, 2219, 2368
StyI CCWWGG 4 cut(s) 1843, 1946, 2332, 3201
TaaI ACNGT 9 cut(s) 242, 766, 1279, 1514, 1667, 2302, 2405, 2629, 2824
TaiI ACGT 4 cut(s) 1576, 1889, 2671, 3255
TaqI TCGA 6 cut(s) 68, 413, 450, 1810, 3477, 3540
TatI WGTACW 2 cut(s) 260, 2926
TauI GCSGC 5 cut(s) 16, 200, 203, 217, 2862
Tru1I TTAA 7 cut(s) 222, 647, 1233, 2024, 2408, 2714, 2871
Tru9I TTAA 7 cut(s) 222, 647, 1233, 2024, 2408, 2714, 2871
TseFI GTSAC 5 cut(s) 1079, 1115, 2374, 2540, 3402
Tsp45I GTSAC 5 cut(s) 1079, 1115, 2374, 2540, 3402
TspGWI ACGGA 1 cut(s) 379
Van91I CCANNNNNTGG 2 cut(s) 983, 1411
VneI GTGCAC 1 cut(s) 1105
VpaK11BI GGWCC 3 cut(s) 45, 305, 593
XapI RAATTY 6 cut(s) 649, 1316, 2420, 2512, 2734, 3358
XbaI TCTAGA 1 cut(s) 2770
XceI RCATGY 4 cut(s) 411, 613, 2231, 3058
XcmI CCANNNNNNNNNTGG 2 cut(s) 980, 2330
XhoI CTCGAG 1 cut(s) 3476
XmiI GTMKAC 2 cut(s) 68, 2159
XmnI GAANNNNTTC 1 cut(s) 3358
XspI CTAG 3 cut(s) 579, 666, 2771
Zsp2I ATGCAT 5 cut(s) 611, 898, 1729, 1827, 2244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.