superfamily. Protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77620 |
| fragaria_vesca | FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 FvH4_2g26770 |
| malus_domestica | MD15G1351000.v1.1 |
| prunus_persica | Prupe.1G499900_v2.0.a1 |
| pyrus_communis | pycom15g31350 |
| rosa_chinensis | RchiOBHm_Chr6g0295641 |
| rosa_laevigata | RLG00000011780 |
| rosa_multiflora | Rmu_sc0005000.1_g000001 Rmu_sc0006802.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00172280 |
| rosa_rugosa | Rorug06G0253100 Rorug06G0253100 |
| rosa_samantha | Rh6AG366100 Rh6BG374200 Rh6CG380500 Rh6DG367300 |
| rosa_wichuraiana | Rw6G031950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1890, 2264 |
| AccI | GTMKAC | 1 cut(s) | 1602 |
| AciI | CCGC | 1 cut(s) | 1796 |
| AclWI | GGATC | 3 cut(s) | 1103, 1569, 3073 |
| AcoI | YGGCCR | 1 cut(s) | 1966 |
| AcsI | RAATTY | 5 cut(s) | 656, 1051, 2648, 2701, 3319 |
| AcuI | CTGAAG | 4 cut(s) | 146, 1638, 1865, 2352 |
| AcyI | GRCGYC | 1 cut(s) | 35 |
| AfaI | GTAC | 7 cut(s) | 274, 1004, 1082, 2895, 3113, 3393, 3407 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 64, 2283, 3088, 3144, 3513, 3516 |
| AflII | CTTAAG | 1 cut(s) | 3544 |
| AjnI | CCWGG | 4 cut(s) | 1019, 1464, 1893, 1994 |
| AleI | CACNNNNGTG | 1 cut(s) | 2496 |
| Alw21I | GWGCWC | 6 cut(s) | 754, 1279, 1308, 1336, 2849, 3559 |
| Alw26I | GTCTC | 2 cut(s) | 737, 2780 |
| Alw44I | GTGCAC | 3 cut(s) | 750, 1275, 3555 |
| AlwI | GGATC | 3 cut(s) | 1103, 1569, 3073 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 776, 2477, 3020 |
| Ama87I | CYCGRG | 1 cut(s) | 107 |
| AoxI | GGCC | 7 cut(s) | 26, 129, 1017, 1235, 1670, 1966, 2163 |
| ApaLI | GTGCAC | 3 cut(s) | 750, 1275, 3555 |
| ApoI | RAATTY | 5 cut(s) | 656, 1051, 2648, 2701, 3319 |
| AspLEI | GCGC | 2 cut(s) | 1765, 3456 |
| AspS9I | GGNCC | 5 cut(s) | 506, 1235, 1670, 1941, 3330 |
| AsuC2I | CCSGG | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 4 cut(s) | 158, 473, 2821, 2893 |
| AsuNHI | GCTAGC | 1 cut(s) | 1199 |
| AvaI | CYCGRG | 1 cut(s) | 107 |
| AvaII | GGWCC | 3 cut(s) | 506, 1941, 3330 |
| AxyI | CCTNAGG | 1 cut(s) | 978 |
| BaeGI | GKGCMC | 4 cut(s) | 754, 1279, 2269, 3559 |
| BalI | TGGCCA | 1 cut(s) | 1968 |
| BanI | GGYRCC | 2 cut(s) | 1890, 2264 |
| BanII | GRGCYC | 2 cut(s) | 1308, 1336 |
| BbsI | GAAGAC | 4 cut(s) | 120, 156, 2340, 3509 |
| Bbv12I | GWGCWC | 6 cut(s) | 754, 1279, 1308, 1336, 2849, 3559 |
| BccI | CCATC | 9 cut(s) | 452, 1383, 1759, 1977, 2053, 2143, 2806, 3079, 3250 |
| BceAI | ACGGC | 5 cut(s) | 59, 133, 175, 2811, 3143 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2246, 2280 |
| BciT130I | CCWGG | 4 cut(s) | 1021, 1466, 1895, 1996 |
| BclI | TGATCA | 1 cut(s) | 3592 |
| BcnI | CCSGG | 1 cut(s) | 25 |
| BcoDI | GTCTC | 2 cut(s) | 737, 2780 |
| BfaI | CTAG | 5 cut(s) | 351, 1200, 1226, 3036, 3249 |
| BfmI | CTRYAG | 6 cut(s) | 312, 1150, 1257, 2478, 2992, 3186 |
| BfoI | RGCGCY | 1 cut(s) | 1766 |
| BfrI | CTTAAG | 1 cut(s) | 3544 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 43 |
| Bme1390I | CCNGG | 5 cut(s) | 25, 1021, 1466, 1895, 1996 |
| Bme18I | GGWCC | 3 cut(s) | 506, 1941, 3330 |
| BmeT110I | CYCGRG | 1 cut(s) | 107 |
| BmgT120I | GGNCC | 5 cut(s) | 506, 1235, 1670, 1941, 3330 |
| BmiI | GGNNCC | 9 cut(s) | 582, 1671, 1892, 1942, 1943, 2266, 3069, 3332, 3570 |
| BmrFI | CCNGG | 5 cut(s) | 25, 1021, 1466, 1895, 1996 |
| BmtI | GCTAGC | 1 cut(s) | 1203 |
| BpiI | GAAGAC | 4 cut(s) | 120, 156, 2340, 3509 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3517, 3549 |
| BpmI | CTGGAG | 3 cut(s) | 303, 2194, 2454 |
| BpuEI | CTTGAG | 3 cut(s) | 820, 953, 1847 |
| BpuMI | CCSGG | 1 cut(s) | 25 |
| BsaAI | YACGTR | 1 cut(s) | 2712 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3043 |
| BsaHI | GRCGYC | 1 cut(s) | 35 |
| BsaWI | WCCGGW | 1 cut(s) | 1702 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 301, 331, 1323, 1353 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 64, 2283, 3088, 3144, 3513, 3516 |
| Bse1I | ACTGG | 6 cut(s) | 320, 569, 960, 1101, 1120, 2211 |
| Bse21I | CCTNAGG | 1 cut(s) | 978 |
| Bse3DI | GCAATG | 1 cut(s) | 2184 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3043 |
| BseBI | CCWGG | 4 cut(s) | 1021, 1466, 1895, 1996 |
| BseGI | GGATG | 8 cut(s) | 400, 541, 1030, 1603, 2051, 2821, 3101, 3134 |
| BseJI | GATNNNNATC | 1 cut(s) | 3043 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 64, 2283, 3088, 3144, 3513, 3516 |
| BseMI | GCAATG | 1 cut(s) | 2184 |
| BseNI | ACTGG | 6 cut(s) | 320, 569, 960, 1101, 1120, 2211 |
| BseRI | GAGGAG | 6 cut(s) | 860, 2432, 3104, 3532, 3535, 3538 |
| BseSI | GKGCMC | 4 cut(s) | 754, 1279, 2269, 3559 |
| BshFI | GGCC | 7 cut(s) | 28, 131, 1019, 1237, 1672, 1968, 2165 |
| BshNI | GGYRCC | 2 cut(s) | 1890, 2264 |
| BsiHKAI | GWGCWC | 6 cut(s) | 754, 1279, 1308, 1336, 2849, 3559 |
| BsiHKCI | CYCGRG | 1 cut(s) | 107 |
| BsiSI | CCGG | 3 cut(s) | 25, 58, 1703 |
| BslFI | GGGAC | 3 cut(s) | 758, 1927, 2921 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 64, 2283, 3088, 3144, 3513, 3516 |
| BsmAI | GTCTC | 2 cut(s) | 737, 2780 |
| BsmFI | GGGAC | 3 cut(s) | 758, 1927, 2921 |
| BsmI | GAATGC | 2 cut(s) | 292, 1768 |
| BsnI | GGCC | 7 cut(s) | 28, 131, 1019, 1237, 1672, 1968, 2165 |
| BsoBI | CYCGRG | 1 cut(s) | 107 |
| Bsp1286I | GDGCHC | 7 cut(s) | 754, 1279, 1308, 1336, 2269, 2849, 3559 |
| Bsp1407I | TGTACA | 1 cut(s) | 2893 |
| BspACI | CCGC | 1 cut(s) | 1796 |
| BspANI | GGCC | 7 cut(s) | 28, 131, 1019, 1237, 1672, 1968, 2165 |
| BspHI | TCATGA | 2 cut(s) | 1519, 2203 |
| BspLI | GGNNCC | 9 cut(s) | 582, 1671, 1892, 1942, 1943, 2266, 3069, 3332, 3570 |
| BspMAI | CTGCAG | 3 cut(s) | 316, 1261, 2482 |
| BspOI | GCTAGC | 1 cut(s) | 1203 |
| BspPI | GGATC | 3 cut(s) | 1103, 1569, 3073 |
| BspT107I | GGYRCC | 2 cut(s) | 1890, 2264 |
| BspTI | CTTAAG | 1 cut(s) | 3544 |
| BsrDI | GCAATG | 1 cut(s) | 2184 |
| BsrGI | TGTACA | 1 cut(s) | 2893 |
| BsrI | ACTGG | 6 cut(s) | 320, 569, 960, 1101, 1120, 2211 |
| BssNI | GRCGYC | 1 cut(s) | 35 |
| BssT1I | CCWWGG | 3 cut(s) | 1665, 2043, 2395 |
| Bst2UI | CCWGG | 4 cut(s) | 1021, 1466, 1895, 1996 |
| Bst6I | CTCTTC | 5 cut(s) | 194, 628, 837, 1188, 1923 |
| BstACI | GRCGYC | 1 cut(s) | 35 |
| BstAFI | CTTAAG | 1 cut(s) | 3544 |
| BstAUI | TGTACA | 1 cut(s) | 2893 |
| BstBAI | YACGTR | 1 cut(s) | 2712 |
| BstC8I | GCNNGC | 5 cut(s) | 427, 1201, 1966, 2988, 3132 |
| BstF5I | GGATG | 8 cut(s) | 400, 541, 1030, 1603, 2051, 2821, 3101, 3134 |
| BstH2I | RGCGCY | 1 cut(s) | 1766 |
| BstHHI | GCGC | 2 cut(s) | 1765, 3456 |
| BstMAI | GTCTC | 2 cut(s) | 737, 2780 |
| BstNI | CCWGG | 4 cut(s) | 1021, 1466, 1895, 1996 |
| BstNSI | RCATGY | 1 cut(s) | 2137 |
| BstSCI | CCNGG | 5 cut(s) | 23, 1019, 1464, 1893, 1994 |
| BstSFI | CTRYAG | 6 cut(s) | 312, 1150, 1257, 2478, 2992, 3186 |
| BstSLI | GKGCMC | 4 cut(s) | 754, 1279, 2269, 3559 |
| BstV2I | GAAGAC | 4 cut(s) | 120, 156, 2340, 3509 |
| BstX2I | RGATCY | 1 cut(s) | 1108 |
| BstYI | RGATCY | 1 cut(s) | 1108 |
| Bsu36I | CCTNAGG | 1 cut(s) | 978 |
| BsuRI | GGCC | 7 cut(s) | 28, 131, 1019, 1237, 1672, 1968, 2165 |
| BtsCI | GGATG | 8 cut(s) | 400, 541, 1030, 1603, 2051, 2821, 3101, 3134 |
| BtsI | GCAGTG | 1 cut(s) | 2935 |
| BtsIMutI | CAGTG | 9 cut(s) | 672, 734, 1108, 1113, 1315, 1395, 2218, 2935, 3557 |
| Cac8I | GCNNGC | 5 cut(s) | 427, 1201, 1966, 2988, 3132 |
| CaiI | CAGNNNCTG | 3 cut(s) | 776, 2477, 3020 |
| CciI | TCATGA | 2 cut(s) | 1519, 2203 |
| CfoI | GCGC | 2 cut(s) | 1765, 3456 |
| Cfr13I | GGNCC | 5 cut(s) | 506, 1235, 1670, 1941, 3330 |
| CseI | GACGC | 1 cut(s) | 43 |
| Csp6I | GTAC | 7 cut(s) | 273, 1003, 1081, 2894, 3112, 3392, 3406 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2899, 2934 |
| CviQI | GTAC | 7 cut(s) | 273, 1003, 1081, 2894, 3112, 3392, 3406 |
| EaeI | YGGCCR | 1 cut(s) | 1966 |
| Eam1104I | CTCTTC | 5 cut(s) | 194, 628, 837, 1188, 1923 |
| EarI | CTCTTC | 5 cut(s) | 194, 628, 837, 1188, 1923 |
| Ecl136II | GAGCTC | 2 cut(s) | 1306, 1334 |
| Eco130I | CCWWGG | 3 cut(s) | 1665, 2043, 2395 |
| Eco24I | GRGCYC | 2 cut(s) | 1308, 1336 |
| Eco32I | GATATC | 1 cut(s) | 2357 |
| Eco47I | GGWCC | 3 cut(s) | 506, 1941, 3330 |
| Eco53kI | GAGCTC | 2 cut(s) | 1306, 1334 |
| Eco57I | CTGAAG | 4 cut(s) | 146, 1638, 1865, 2352 |
| Eco81I | CCTNAGG | 1 cut(s) | 978 |
| Eco88I | CYCGRG | 1 cut(s) | 107 |
| EcoICRI | GAGCTC | 2 cut(s) | 1306, 1334 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1670, 1941, 3330 |
| EcoRII | CCWGG | 4 cut(s) | 1019, 1464, 1893, 1994 |
| EcoRV | GATATC | 1 cut(s) | 2357 |
| EcoT14I | CCWWGG | 3 cut(s) | 1665, 2043, 2395 |
| EcoT22I | ATGCAT | 4 cut(s) | 1780, 1878, 2307, 3103 |
| EcoT38I | GRGCYC | 2 cut(s) | 1308, 1336 |
| ErhI | CCWWGG | 3 cut(s) | 1665, 2043, 2395 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 971, 1003, 2085, 2117, 3046, 3078, 3286, 3318 |
| FaqI | GGGAC | 3 cut(s) | 758, 1927, 2921 |
| FauNDI | CATATG | 1 cut(s) | 3307 |
| FbaI | TGATCA | 1 cut(s) | 3592 |
| FblI | GTMKAC | 1 cut(s) | 1602 |
| FokI | GGATG | 8 cut(s) | 387, 548, 1037, 1610, 2038, 2828, 3088, 3121 |
| FriOI | GRGCYC | 2 cut(s) | 1308, 1336 |
| FspBI | CTAG | 5 cut(s) | 351, 1200, 1226, 3036, 3249 |
| GlaI | GCGC | 2 cut(s) | 1764, 3455 |
| GsuI | CTGGAG | 3 cut(s) | 303, 2194, 2454 |
| HaeII | RGCGCY | 1 cut(s) | 1766 |
| HaeIII | GGCC | 7 cut(s) | 28, 131, 1019, 1237, 1672, 1968, 2165 |
| HapII | CCGG | 3 cut(s) | 25, 58, 1703 |
| HgaI | GACGC | 1 cut(s) | 43 |
| HhaI | GCGC | 2 cut(s) | 1765, 3456 |
| Hin1I | GRCGYC | 1 cut(s) | 35 |
| Hin6I | GCGC | 2 cut(s) | 1763, 3454 |
| HinP1I | GCGC | 2 cut(s) | 1763, 3454 |
| HincII | GTYRAC | 1 cut(s) | 790 |
| HindII | GTYRAC | 1 cut(s) | 790 |
| HindIII | AAGCTT | 2 cut(s) | 469, 3474 |
| HpaII | CCGG | 3 cut(s) | 25, 58, 1703 |
| HphI | GGTGA | 4 cut(s) | 158, 473, 2821, 2893 |
| Hpy166II | GTNNAC | 8 cut(s) | 75, 275, 752, 790, 1277, 1409, 1603, 3557 |
| Hpy8I | GTNNAC | 8 cut(s) | 75, 275, 752, 790, 1277, 1409, 1603, 3557 |
| Hpy99I | CGWCG | 2 cut(s) | 37, 3625 |
| HpyCH4IV | ACGT | 3 cut(s) | 905, 2425, 2711 |
| HpySE526I | ACGT | 3 cut(s) | 905, 2425, 2711 |
| Hsp92I | GRCGYC | 1 cut(s) | 35 |
| HspAI | GCGC | 2 cut(s) | 1763, 3454 |
| KflI | GGGWCCC | 1 cut(s) | 1941 |
| Ksp22I | TGATCA | 1 cut(s) | 3592 |
| LmnI | GCTCC | 9 cut(s) | 244, 322, 1303, 1331, 2419, 2798, 2852, 3538, 3574 |
| MaeI | CTAG | 5 cut(s) | 351, 1200, 1226, 3036, 3249 |
| MaeII | ACGT | 3 cut(s) | 905, 2425, 2711 |
| MaeIII | GTNAC | 9 cut(s) | 1034, 1124, 1130, 1166, 1228, 2365, 2596, 2881, 3343 |
| MfeI | CAATTG | 7 cut(s) | 447, 1239, 2514, 2722, 2733, 3141, 3628 |
| MflI | RGATCY | 1 cut(s) | 1108 |
| MhlI | GDGCHC | 7 cut(s) | 754, 1279, 1308, 1336, 2269, 2849, 3559 |
| MlsI | TGGCCA | 1 cut(s) | 1968 |
| MluNI | TGGCCA | 1 cut(s) | 1968 |
| MlyI | GAGTC | 6 cut(s) | 57, 193, 523, 1163, 2201, 3101 |
| MmeI | TCCRAC | 5 cut(s) | 324, 706, 1304, 2739, 2874 |
| Mox20I | TGGCCA | 1 cut(s) | 1968 |
| Mph1103I | ATGCAT | 4 cut(s) | 1780, 1878, 2307, 3103 |
| MscI | TGGCCA | 1 cut(s) | 1968 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1318, 1773, 2496 |
| Msp20I | TGGCCA | 1 cut(s) | 1968 |
| MspA1I | CMGCKG | 1 cut(s) | 3108 |
| MspCI | CTTAAG | 1 cut(s) | 3544 |
| MspI | CCGG | 3 cut(s) | 25, 58, 1703 |
| MspR9I | CCNGG | 5 cut(s) | 25, 1021, 1466, 1895, 1996 |
| MunI | CAATTG | 7 cut(s) | 447, 1239, 2514, 2722, 2733, 3141, 3628 |
| Mva1269I | GAATGC | 2 cut(s) | 292, 1768 |
| MvaI | CCWGG | 4 cut(s) | 1021, 1466, 1895, 1996 |
| NciI | CCSGG | 1 cut(s) | 25 |
| NdeI | CATATG | 1 cut(s) | 3307 |
| NheI | GCTAGC | 1 cut(s) | 1199 |
| NlaIV | GGNNCC | 9 cut(s) | 582, 1671, 1892, 1942, 1943, 2266, 3069, 3332, 3570 |
| NmeAIII | GCCGAG | 2 cut(s) | 157, 388 |
| NmuCI | GTSAC | 4 cut(s) | 1130, 1166, 2881, 3343 |
| NsiI | ATGCAT | 4 cut(s) | 1780, 1878, 2307, 3103 |
| NspI | RCATGY | 1 cut(s) | 2137 |
| OliI | CACNNNNGTG | 1 cut(s) | 2496 |
| PaeR7I | CTCGAG | 1 cut(s) | 107 |
| PagI | TCATGA | 2 cut(s) | 1519, 2203 |
| PasI | CCCWGGG | 1 cut(s) | 1995 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 159, 165 |
| PctI | GAATGC | 2 cut(s) | 292, 1768 |
| PflFI | GACNNNGTC | 1 cut(s) | 2460 |
| PleI | GAGTC | 6 cut(s) | 56, 192, 523, 1163, 2201, 3100 |
| PpsI | GAGTC | 6 cut(s) | 56, 192, 523, 1163, 2201, 3100 |
| Ppu21I | YACGTR | 1 cut(s) | 2712 |
| PpuMI | RGGWCCY | 2 cut(s) | 1941, 3330 |
| Psp124BI | GAGCTC | 2 cut(s) | 1308, 1336 |
| Psp5II | RGGWCCY | 2 cut(s) | 1941, 3330 |
| Psp6I | CCWGG | 4 cut(s) | 1019, 1464, 1893, 1994 |
| PspGI | CCWGG | 4 cut(s) | 1019, 1464, 1893, 1994 |
| PspN4I | GGNNCC | 9 cut(s) | 582, 1671, 1892, 1942, 1943, 2266, 3069, 3332, 3570 |
| PspPI | GGNCC | 5 cut(s) | 506, 1235, 1670, 1941, 3330 |
| PspPPI | RGGWCCY | 2 cut(s) | 1941, 3330 |
| PspXI | VCTCGAGB | 1 cut(s) | 107 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1806, 1838 |
| PstI | CTGCAG | 3 cut(s) | 316, 1261, 2482 |
| PstNI | CAGNNNCTG | 3 cut(s) | 776, 2477, 3020 |
| PsuI | RGATCY | 1 cut(s) | 1108 |
| PsyI | GACNNNGTC | 1 cut(s) | 2460 |
| PvuII | CAGCTG | 1 cut(s) | 3108 |
| RsaI | GTAC | 7 cut(s) | 274, 1004, 1082, 2895, 3113, 3393, 3407 |
| RsaNI | GTAC | 7 cut(s) | 273, 1003, 1081, 2894, 3112, 3392, 3406 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1318, 1773, 2496 |
| SacI | GAGCTC | 2 cut(s) | 1308, 1336 |
| Sau96I | GGNCC | 5 cut(s) | 506, 1235, 1670, 1941, 3330 |
| SchI | GAGTC | 6 cut(s) | 57, 193, 523, 1163, 2201, 3101 |
| ScrFI | CCNGG | 5 cut(s) | 25, 1021, 1466, 1895, 1996 |
| SduI | GDGCHC | 7 cut(s) | 754, 1279, 1308, 1336, 2269, 2849, 3559 |
| SfcI | CTRYAG | 6 cut(s) | 312, 1150, 1257, 2478, 2992, 3186 |
| Sfr274I | CTCGAG | 1 cut(s) | 107 |
| SinI | GGWCC | 3 cut(s) | 506, 1941, 3330 |
| SlaI | CTCGAG | 1 cut(s) | 107 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1318, 1773, 2496 |
| SmlI | CTYRAG | 5 cut(s) | 107, 835, 932, 1826, 3544 |
| SmoI | CTYRAG | 5 cut(s) | 107, 835, 932, 1826, 3544 |
| SsiI | CCGC | 1 cut(s) | 1796 |
| SspI | AATATT | 2 cut(s) | 1989, 2634 |
| SspMI | CTAG | 5 cut(s) | 351, 1200, 1226, 3036, 3249 |
| SstI | GAGCTC | 2 cut(s) | 1308, 1336 |
| StyD4I | CCNGG | 5 cut(s) | 23, 1019, 1464, 1893, 1994 |
| StyI | CCWWGG | 3 cut(s) | 1665, 2043, 2395 |
| TaiI | ACGT | 3 cut(s) | 908, 2428, 2714 |
| TaqI | TCGA | 6 cut(s) | 32, 108, 1096, 1953, 3410, 3623 |
| TatI | WGTACW | 3 cut(s) | 272, 2893, 3405 |
| TscAI | CASTG | 9 cut(s) | 679, 734, 1108, 1120, 1315, 1395, 2218, 2935, 3564 |
| TseFI | GTSAC | 4 cut(s) | 1130, 1166, 2881, 3343 |
| Tsp45I | GTSAC | 4 cut(s) | 1130, 1166, 2881, 3343 |
| TspGWI | ACGGA | 2 cut(s) | 391, 2798 |
| TspRI | CASTG | 9 cut(s) | 679, 734, 1108, 1120, 1315, 1395, 2218, 2935, 3564 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2460 |
| Vha464I | CTTAAG | 1 cut(s) | 3544 |
| VneI | GTGCAC | 3 cut(s) | 750, 1275, 3555 |
| VpaK11BI | GGWCC | 3 cut(s) | 506, 1941, 3330 |
| XapI | RAATTY | 5 cut(s) | 656, 1051, 2648, 2701, 3319 |
| XbaI | TCTAGA | 1 cut(s) | 3035 |
| XceI | RCATGY | 1 cut(s) | 2137 |
| XhoI | CTCGAG | 1 cut(s) | 107 |
| XmiI | GTMKAC | 1 cut(s) | 1602 |
| XspI | CTAG | 5 cut(s) | 351, 1200, 1226, 3036, 3249 |
| Zsp2I | ATGCAT | 4 cut(s) | 1780, 1878, 2307, 3103 |