Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007005

Physical Location & Seq

Genomic Coordinates Forward (+)

29461391 .. 29463389

Gene Structure 1999 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G78300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 780 bp

ATGGCGTCTGGGCGTGAAGAGTTCGTATACATGGCTAAGCTCGCGGAGCAAGCGGAGAGGTACGAAGAGATGGTAGAGTTTATGGAGAAAGTCTCCGCCGCCGTTGATGGCGATGAACTCACCGTAGAAGAGCGAAATCTTCTCTCCGTCGCTTATAAGAATGTGATTGGTGCTCGCCGTGCCTCGTGGCGTATCATTTCATCGATCGAGCAGAAGGAAGAGAGCCGTGGTAACGATGACCACGTCACGGCGATCCGTGAATATAGGTCTAAGATCGAGACGGAACTCTCCGGAATCTGCGACGGAATCCTTAAGTTGCTTGACTCTAGACTCATCCCTGCCGCTGCTTCTGGTGATTCCAAGGTCTTTTACCTTAAGATGAAGGGAGATTATCACAGGTACTTGGCTGAGTTTAAGACTGGTCAAGAGAGGAAAGACGCCGCCGAACATACACTCGCCGCTTACAAATCTGCTCAGGATATTGCTAATGCAGAGCTTGCTCCAACACACCCAATTCGTCTTGGTCTTGCATTGAACTTCTCTGTGTTCTATTACGAGATCCTCAATTCTCCTGATCGTGCCTGTAACCTCGCCAAACAGGCCTTTGATGAGGCGATTGCAGAGTTGGACACTCTTGGTGAAGAGTCATACAAAGACAGTACCTTGATCATGCAGCTTCTTCGTGACAATCTCACTCTCTGGACATCTGATATGCAGGATGATGCTGCGGATGAGATCAAGGAAGCAGCAGCGCCAAAACCGACCGAGGAACAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0019222 GO:0023052 GO:0031090 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

259

Amino Acids

29.16

Weight (kDa)

4.71

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
14-3-3	PF00244	11 - 235	3.7e-106	14-3-3 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35160 AT1G35160 AT1G78300 AT4G09000 AT4G09000
fragaria_vesca	FvH4_5g36710
malus_domestica	MD00G1018600.v1.1 MD08G1187400.v1.1 MD10G1084500.v1.1 MD15G1373400.v1.1
prunus_persica	Prupe.1G521900_v2.0.a1 Prupe.8G064700_v2.0.a1
pyrus_communis	pycom05g06310 pycom08g16100 pycom15g33450
rosa_chinensis	RchiOBHm_Chr7g0242691
rosa_laevigata	RLG00000000887
rosa_multiflora	Rmu_sc0017298.1_g000001
rosa_roxburghii	Rroxscaffold_3G00222580
rosa_rugosa	Rorug07G0316300
rosa_samantha	Rh7AG471300 Rh7BG441600 Rh7CG488300 Rh7DG456900
rosa_wichuraiana	Rw7G039230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	156
AccI	GTMKAC	1 cut(s)	27
AccII	CGCG	1 cut(s)	44
AccIII	TCCGGA	1 cut(s)	290
AciI	CCGC	8 cut(s)	44, 53, 96, 99, 342, 441, 459, 728
AclWI	GGATC	2 cut(s)	247, 553
AcyI	GRCGYC	2 cut(s)	5, 438
AfaI	GTAC	3 cut(s)	62, 401, 661
AfiI	CCNNNNNNNGG	1 cut(s)	247
AflII	CTTAAG	2 cut(s)	311, 374
AgsI	TTSAA	1 cut(s)	535
AjiI	CACGTC	1 cut(s)	244
AluBI	AGCT	3 cut(s)	40, 496, 676
AluI	AGCT	3 cut(s)	40, 496, 676
Alw21I	GWGCWC	1 cut(s)	175
Alw26I	GTCTC	2 cut(s)	97, 272
AlwI	GGATC	2 cut(s)	247, 553
Aor13HI	TCCGGA	1 cut(s)	290
AoxI	GGCC	1 cut(s)	600
ApeKI	GCWGC	5 cut(s)	344, 673, 725, 746, 749
AspLEI	GCGC	1 cut(s)	754
AsuHPI	GGTGA	3 cut(s)	112, 365, 650
BauI	CACGAG	1 cut(s)	184
Bbv12I	GWGCWC	1 cut(s)	175
BbvI	GCAGC	5 cut(s)	331, 685, 712, 758, 761
BccI	CCATC	2 cut(s)	64, 101
BceAI	ACGGC	4 cut(s)	86, 162, 210, 264
BcgI	CGANNNNNNTGC	2 cut(s)	662, 696
BclI	TGATCA	1 cut(s)	666
BcoDI	GTCTC	2 cut(s)	97, 272
BfaI	CTAG	1 cut(s)	327
BfoI	RGCGCY	1 cut(s)	755
BfrI	CTTAAG	2 cut(s)	311, 374
BglI	GCCNNNNNGGC	1 cut(s)	599
BisI	GCNGC	9 cut(s)	99, 342, 345, 441, 459, 674, 726, 747, 750
BlpI	GCTNAGC	1 cut(s)	36
BlsI	GCNGC	9 cut(s)	100, 343, 346, 442, 460, 675, 727, 748, 751
BmgBI	CACGTC	1 cut(s)	244
BmsI	GCATC	1 cut(s)	712
BplI	GAGNNNNNCTC	2 cut(s)	77, 109
Bpu10I	CCTNAGC	1 cut(s)	474
Bpu1102I	GCTNAGC	1 cut(s)	36
Bsa29I	ATCGAT	1 cut(s)	203
BsaHI	GRCGYC	2 cut(s)	5, 438
BsaJI	CCNNGG	3 cut(s)	226, 360, 765
BsaWI	WCCGGW	1 cut(s)	290
Bsc4I	CCNNNNNNNGG	1 cut(s)	247
Bse1I	ACTGG	1 cut(s)	424
BseAI	TCCGGA	1 cut(s)	290
BseCI	ATCGAT	1 cut(s)	203
BseDI	CCNNGG	3 cut(s)	226, 360, 765
BseGI	GGATG	3 cut(s)	333, 724, 736
BseLI	CCNNNNNNNGG	1 cut(s)	247
BseMII	CTCAG	2 cut(s)	399, 488
BseNI	ACTGG	1 cut(s)	424
BseXI	GCAGC	5 cut(s)	331, 685, 712, 758, 761
Bsh1236I	CGCG	1 cut(s)	44
Bsh1285I	CGRYCG	2 cut(s)	207, 765
BshFI	GGCC	1 cut(s)	602
BshVI	ATCGAT	1 cut(s)	203
BsiEI	CGRYCG	2 cut(s)	207, 765
BsiHKAI	GWGCWC	1 cut(s)	175
BsiSI	CCGG	1 cut(s)	291
BslI	CCNNNNNNNGG	1 cut(s)	247
BsmAI	GTCTC	2 cut(s)	97, 272
BsmBI	CGTCTC	1 cut(s)	272
BsnI	GGCC	1 cut(s)	602
Bsp1286I	GDGCHC	1 cut(s)	175
Bsp13I	TCCGGA	1 cut(s)	290
Bsp143I	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
Bsp1720I	GCTNAGC	1 cut(s)	36
BspACI	CCGC	8 cut(s)	44, 53, 96, 99, 342, 441, 459, 728
BspANI	GGCC	1 cut(s)	602
BspCNI	CTCAG	2 cut(s)	400, 487
BspDI	ATCGAT	1 cut(s)	203
BspEI	TCCGGA	1 cut(s)	290
BspFNI	CGCG	1 cut(s)	44
BspPI	GGATC	2 cut(s)	247, 553
BspQI	GCTCTTC	1 cut(s)	123
BspTI	CTTAAG	2 cut(s)	311, 374
BsrI	ACTGG	1 cut(s)	424
BssECI	CCNNGG	3 cut(s)	226, 360, 765
BssMI	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
BssNAI	GTATAC	1 cut(s)	28
BssNI	GRCGYC	2 cut(s)	5, 438
BssSI	CACGAG	1 cut(s)	184
BssT1I	CCWWGG	1 cut(s)	360
Bst1107I	GTATAC	1 cut(s)	28
Bst2BI	CACGAG	1 cut(s)	184
Bst4CI	ACNGT	2 cut(s)	124, 659
Bst6I	CTCTTC	5 cut(s)	12, 60, 123, 213, 636
BstACI	GRCGYC	2 cut(s)	5, 438
BstAFI	CTTAAG	2 cut(s)	311, 374
BstAPI	GCANNNNNTGC	1 cut(s)	497
BstC8I	GCNNGC	4 cut(s)	42, 51, 175, 498
BstDEI	CTNAG	4 cut(s)	36, 270, 408, 474
BstDSI	CCRYGG	1 cut(s)	226
BstF5I	GGATG	3 cut(s)	333, 724, 736
BstFNI	CGCG	1 cut(s)	44
BstH2I	RGCGCY	1 cut(s)	755
BstHHI	GCGC	1 cut(s)	754
BstKTI	GATC	7 cut(s)	207, 255, 276, 561, 577, 669, 738
BstMAI	GTCTC	2 cut(s)	97, 272
BstMBI	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
BstMCI	CGRYCG	2 cut(s)	207, 765
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 46, 50, 179, 497, 599
BstUI	CGCG	1 cut(s)	44
BstV1I	GCAGC	5 cut(s)	331, 685, 712, 758, 761
BstX2I	RGATCY	1 cut(s)	558
BstYI	RGATCY	1 cut(s)	558
BstZ17I	GTATAC	1 cut(s)	28
Bsu15I	ATCGAT	1 cut(s)	203
BsuRI	GGCC	1 cut(s)	602
BsuTUI	ATCGAT	1 cut(s)	203
BtgI	CCRYGG	1 cut(s)	226
BtgZI	GCGATG	1 cut(s)	126
BtrI	CACGTC	1 cut(s)	244
BtsCI	GGATG	3 cut(s)	333, 724, 736
Cac8I	GCNNGC	4 cut(s)	42, 51, 175, 498
CfoI	GCGC	1 cut(s)	754
ClaI	ATCGAT	1 cut(s)	203
CseI	GACGC	1 cut(s)	446
Csp6I	GTAC	3 cut(s)	61, 400, 660
CviAII	CATG	2 cut(s)	31, 670
CviJI	RGCY	7 cut(s)	35, 40, 225, 407, 496, 602, 676
CviKI_1	RGCY	7 cut(s)	35, 40, 225, 407, 496, 602, 676
CviQI	GTAC	3 cut(s)	61, 400, 660
DdeI	CTNAG	4 cut(s)	36, 270, 408, 474
DpnI	GATC	7 cut(s)	206, 254, 275, 560, 576, 668, 737
DpnII	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
Eam1104I	CTCTTC	5 cut(s)	12, 60, 123, 213, 636
EarI	CTCTTC	5 cut(s)	12, 60, 123, 213, 636
EciI	GGCGGA	1 cut(s)	85
Eco130I	CCWWGG	1 cut(s)	360
Eco147I	AGGCCT	1 cut(s)	602
EcoT14I	CCWWGG	1 cut(s)	360
ErhI	CCWWGG	1 cut(s)	360
Esp3I	CGTCTC	1 cut(s)	272
FaeI	CATG	2 cut(s)	34, 673
FaiI	YATR	9 cut(s)	28, 32, 83, 156, 264, 450, 649, 671, 713
FatI	CATG	2 cut(s)	30, 669
FbaI	TGATCA	1 cut(s)	666
FblI	GTMKAC	1 cut(s)	27
Fnu4HI	GCNGC	9 cut(s)	99, 342, 345, 441, 459, 674, 726, 747, 750
FokI	GGATG	3 cut(s)	320, 731, 743
Fsp4HI	GCNGC	9 cut(s)	99, 342, 345, 441, 459, 674, 726, 747, 750
FspBI	CTAG	1 cut(s)	327
GlaI	GCGC	1 cut(s)	753
GluI	GCNGC	9 cut(s)	99, 342, 345, 441, 459, 674, 726, 747, 750
HaeII	RGCGCY	1 cut(s)	755
HaeIII	GGCC	1 cut(s)	602
HapII	CCGG	1 cut(s)	291
HgaI	GACGC	1 cut(s)	446
HhaI	GCGC	1 cut(s)	754
Hin1I	GRCGYC	2 cut(s)	5, 438
Hin1II	CATG	2 cut(s)	34, 673
Hin6I	GCGC	1 cut(s)	752
HinP1I	GCGC	1 cut(s)	752
HinfI	GANTC	6 cut(s)	294, 306, 323, 330, 356, 644
HpaII	CCGG	1 cut(s)	291
HphI	GGTGA	3 cut(s)	112, 365, 650
Hpy166II	GTNNAC	1 cut(s)	28
Hpy188I	TCNGA	1 cut(s)	709
Hpy188III	TCNNGA	8 cut(s)	277, 291, 327, 425, 476, 572, 683, 700
Hpy8I	GTNNAC	1 cut(s)	28
Hpy99I	CGWCG	2 cut(s)	152, 305
HpyAV	CCTTC	2 cut(s)	208, 376
HpyCH4III	ACNGT	2 cut(s)	124, 659
HpyCH4IV	ACGT	1 cut(s)	243
HpyCH4V	TGCA	5 cut(s)	491, 530, 620, 673, 715
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 46, 50, 179, 497, 599
HpyF3I	CTNAG	4 cut(s)	36, 270, 408, 474
HpySE526I	ACGT	1 cut(s)	243
Hsp92I	GRCGYC	2 cut(s)	5, 438
Hsp92II	CATG	2 cut(s)	34, 673
HspAI	GCGC	1 cut(s)	752
Kpn2I	TCCGGA	1 cut(s)	290
Ksp22I	TGATCA	1 cut(s)	666
Kzo9I	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
LguI	GCTCTTC	1 cut(s)	123
LmnI	GCTCC	2 cut(s)	46, 505
Lsp1109I	GCAGC	5 cut(s)	331, 685, 712, 758, 761
LweI	GCATC	1 cut(s)	712
MaeI	CTAG	1 cut(s)	327
MaeII	ACGT	1 cut(s)	243
MaeIII	GTNAC	4 cut(s)	230, 244, 584, 683
MalI	GATC	7 cut(s)	206, 254, 275, 560, 576, 668, 737
MboI	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
MboII	GAAGA	7 cut(s)	29, 77, 131, 140, 230, 653, 671
MflI	RGATCY	1 cut(s)	558
MhlI	GDGCHC	1 cut(s)	175
MluCI	AATT	2 cut(s)	513, 565
MlyI	GAGTC	3 cut(s)	317, 324, 653
MmeI	TCCRAC	2 cut(s)	527, 606
MnlI	CCTC	7 cut(s)	51, 193, 423, 572, 599, 604, 760
MroI	TCCGGA	1 cut(s)	290
MseI	TTAA	3 cut(s)	312, 375, 414
MspA1I	CMGCKG	1 cut(s)	344
MspCI	CTTAAG	2 cut(s)	311, 374
MspI	CCGG	1 cut(s)	291
MvnI	CGCG	1 cut(s)	44
MwoI	GCNNNNNNNGC	6 cut(s)	41, 46, 50, 179, 497, 599
NdeII	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
NlaIII	CATG	2 cut(s)	34, 673
NmuCI	GTSAC	2 cut(s)	244, 683
PceI	AGGCCT	1 cut(s)	602
PciSI	GCTCTTC	1 cut(s)	123
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PfeI	GAWTC	3 cut(s)	294, 306, 356
PflFI	GACNNNGTC	1 cut(s)	242
PkrI	GCNGC	9 cut(s)	100, 343, 346, 442, 460, 675, 727, 748, 751
Ple19I	CGATCG	1 cut(s)	207
PleI	GAGTC	3 cut(s)	317, 324, 652
PpsI	GAGTC	3 cut(s)	317, 324, 652
PsiI	TTATAA	1 cut(s)	156
PsuI	RGATCY	1 cut(s)	558
PsyI	GACNNNGTC	1 cut(s)	242
PvuI	CGATCG	1 cut(s)	207
RsaI	GTAC	3 cut(s)	62, 401, 661
RsaNI	GTAC	3 cut(s)	61, 400, 660
SapI	GCTCTTC	1 cut(s)	123
SaqAI	TTAA	3 cut(s)	312, 375, 414
SatI	GCNGC	9 cut(s)	99, 342, 345, 441, 459, 674, 726, 747, 750
Sau3AI	GATC	7 cut(s)	204, 252, 273, 558, 574, 666, 735
SchI	GAGTC	3 cut(s)	317, 324, 653
SduI	GDGCHC	1 cut(s)	175
SfaNI	GCATC	1 cut(s)	712
SmlI	CTYRAG	2 cut(s)	311, 374
SmoI	CTYRAG	2 cut(s)	311, 374
Sse9I	AATT	2 cut(s)	513, 565
SseBI	AGGCCT	1 cut(s)	602
SsiI	CCGC	8 cut(s)	44, 53, 96, 99, 342, 441, 459, 728
SspMI	CTAG	1 cut(s)	327
StuI	AGGCCT	1 cut(s)	602
StyI	CCWWGG	1 cut(s)	360
TaaI	ACNGT	2 cut(s)	124, 659
TaiI	ACGT	1 cut(s)	246
TaqI	TCGA	3 cut(s)	203, 207, 276
TaqII	GACCGA	1 cut(s)	779
TasI	AATT	2 cut(s)	513, 565
TauI	GCSGC	4 cut(s)	101, 344, 443, 461
TfiI	GAWTC	3 cut(s)	294, 306, 356
Tru1I	TTAA	3 cut(s)	312, 375, 414
Tru9I	TTAA	3 cut(s)	312, 375, 414
TseFI	GTSAC	2 cut(s)	244, 683
TseI	GCWGC	5 cut(s)	344, 673, 725, 746, 749
Tsp45I	GTSAC	2 cut(s)	244, 683
TspDTI	ATGAA	3 cut(s)	129, 189, 395
TspGWI	ACGGA	4 cut(s)	136, 245, 296, 318
Tth111I	GACNNNGTC	1 cut(s)	242
Vha464I	CTTAAG	2 cut(s)	311, 374
XbaI	TCTAGA	1 cut(s)	326
XmiI	GTMKAC	1 cut(s)	27
XspI	CTAG	1 cut(s)	327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.