Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007005

Physical Location & Seq

Genomic Coordinates Forward (+)

42783897 .. 42785993

Gene Structure 2097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G521900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 789 bp

ATGGCGGCAACCACACCCTCGCCCCGTGAAGAGAACGTGTACATGGCGAAGCTCGCGGAGCAAGCTGAGCGCTACGAGGAGATGGTGGAGTTCGTCGAGAAGGTCTCGGCCTCCGCCGAAAAGGAGGAGCTGACCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTGATCGGCGCTCGCCGGGCCTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGCGGCAACGACGACCATGTCGCCATGATCCGCGACTACCGATCCAAGATCGAGACCGAGCTCTCCAACATCTGCGATGGCATTCTCAAGCTGCTCGACTCGCGGCTCATCCCTTCCGCCTTCGCCGGCGACTCCAAGGTCTTCTACCTCAAGATGAAGGGCGACTACCATCGCTATCTTGCTGAGTTCAAGACCGGCACCGAGCGCAAGGAGGCTGCTGAGAGCACTCTCTCAGCCTACAAAGCTGCTCAGGACATTGCCAATGCAGAACTGGCACCAACGCATCCAATCCGTCTGGGATTGGCTCTCAACTTCTCTGTGTTCTACTATGAGATTCTGAACTCCCCTGATCGCGCTTGCAATCTCGCCAAACAGGCTTTTGATGAGGCAATCGCAGAGTTGGACACTCTCGGCGAGGAGTCATACAAGGACAGCACTTTGATAATGCAACTTCTCCGTGACAACCTCACTCTGTGGACCTCTGACATGCAGGATGATGGGGCGGATGAGATTAAAGAAGCAGCACCCAAGCCTGAGGAACCAAAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0019222 GO:0023052 GO:0031090 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

263

Amino Acids

29.59

Weight (kDa)

4.77

Isoelectric Point (pI)

51.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35160 AT1G35160 AT1G78300 AT4G09000 AT4G09000
fragaria_vesca	FvH4_5g36710
malus_domestica	MD00G1018600.v1.1 MD08G1187400.v1.1 MD10G1084500.v1.1 MD15G1373400.v1.1
prunus_persica	Prupe.1G521900_v2.0.a1 Prupe.8G064700_v2.0.a1
pyrus_communis	pycom05g06310 pycom08g16100 pycom15g33450
rosa_chinensis	RchiOBHm_Chr7g0242691
rosa_laevigata	RLG00000000887
rosa_multiflora	Rmu_sc0017298.1_g000001
rosa_roxburghii	Rroxscaffold_3G00222580
rosa_rugosa	Rorug07G0316300
rosa_samantha	Rh7AG471300 Rh7BG441600 Rh7CG488300 Rh7DG456900
rosa_wichuraiana	Rw7G039230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	254, 374
AccB1I	GGYRCC	2 cut(s)	434, 511
AccII	CGCG	5 cut(s)	56, 240, 270, 340, 591
AciI	CCGC	9 cut(s)	5, 56, 114, 238, 240, 268, 340, 354, 740
AclWI	GGATC	2 cut(s)	259, 273
AdeI	CACNNNGTG	1 cut(s)	711
AfaI	GTAC	1 cut(s)	41
AfeI	AGCGCT	1 cut(s)	71
AflIII	ACRYGT	1 cut(s)	36
AgsI	TTSAA	1 cut(s)	427
AjnI	CCWGG	1 cut(s)	197
AluBI	AGCT	6 cut(s)	52, 65, 130, 298, 328, 482
AluI	AGCT	6 cut(s)	52, 65, 130, 298, 328, 482
Alw21I	GWGCWC	2 cut(s)	300, 464
Alw26I	GTCTC	2 cut(s)	109, 284
AlwI	GGATC	2 cut(s)	259, 273
Aor51HI	AGCGCT	1 cut(s)	71
AoxI	GGCC	2 cut(s)	108, 192
ApeKI	GCWGC	4 cut(s)	328, 452, 482, 758
AspLEI	GCGC	6 cut(s)	72, 147, 185, 204, 444, 593
AspS9I	GGNCC	2 cut(s)	192, 714
AsuC2I	CCSGG	1 cut(s)	191
AvaII	GGWCC	1 cut(s)	714
AxyI	CCTNAGG	1 cut(s)	771
BanI	GGYRCC	2 cut(s)	434, 511
BanII	GRGCYC	1 cut(s)	300
BarI	GAAGNNNNNNTAC	2 cut(s)	386, 418
BbsI	GAAGAC	1 cut(s)	370
Bbv12I	GWGCWC	2 cut(s)	300, 464
BbvI	GCAGC	4 cut(s)	315, 439, 469, 770
BccI	CCATC	5 cut(s)	76, 224, 308, 414, 728
BciT130I	CCWGG	1 cut(s)	199
BcnI	CCSGG	1 cut(s)	191
BcoDI	GTCTC	2 cut(s)	109, 284
BfoI	RGCGCY	2 cut(s)	73, 186
BglI	GCCNNNNNGGC	1 cut(s)	611
BisI	GCNGC	8 cut(s)	6, 238, 241, 329, 341, 453, 483, 759
BlpI	GCTNAGC	1 cut(s)	66
BlsI	GCNGC	8 cut(s)	7, 239, 242, 330, 342, 454, 484, 760
Bme1390I	CCNGG	2 cut(s)	191, 199
Bme18I	GGWCC	1 cut(s)	714
BmgT120I	GGNCC	2 cut(s)	192, 714
BmiI	GGNNCC	3 cut(s)	436, 513, 777
BmrFI	CCNGG	2 cut(s)	191, 199
BmsI	GCATC	2 cut(s)	213, 529
BpiI	GAAGAC	1 cut(s)	370
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
Bpu10I	CCTNAGC	1 cut(s)	486
Bpu1102I	GCTNAGC	1 cut(s)	66
BpuEI	CTTGAG	2 cut(s)	308, 371
BpuMI	CCSGG	1 cut(s)	191
BsaI	GGTCTC	2 cut(s)	109, 284
BsaJI	CCNNGG	3 cut(s)	135, 238, 372
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bse118I	RCCGGY	2 cut(s)	362, 431
Bse1I	ACTGG	1 cut(s)	513
Bse21I	CCTNAGG	1 cut(s)	771
Bse3DI	GCAATG	1 cut(s)	492
BseBI	CCWGG	1 cut(s)	199
BseDI	CCNNGG	3 cut(s)	135, 238, 372
BseGI	GGATG	4 cut(s)	345, 520, 736, 748
BseMI	GCAATG	1 cut(s)	492
BseMII	CTCAG	6 cut(s)	57, 411, 447, 483, 500, 762
BseNI	ACTGG	1 cut(s)	513
BseRI	GAGGAG	7 cut(s)	92, 140, 143, 155, 202, 245, 668
BseXI	GCAGC	4 cut(s)	315, 439, 469, 770
Bsh1236I	CGCG	5 cut(s)	56, 240, 270, 340, 591
BshFI	GGCC	2 cut(s)	110, 194
BshNI	GGYRCC	2 cut(s)	434, 511
BsiHKAI	GWGCWC	2 cut(s)	300, 464
BsiSI	CCGG	3 cut(s)	190, 363, 432
BsmAI	GTCTC	2 cut(s)	109, 284
BsmI	GAATGC	1 cut(s)	318
BsnI	GGCC	2 cut(s)	110, 194
Bso31I	GGTCTC	2 cut(s)	109, 284
Bsp1286I	GDGCHC	2 cut(s)	300, 464
Bsp1407I	TGTACA	1 cut(s)	39
Bsp143I	GATC	5 cut(s)	177, 264, 278, 285, 586
Bsp1720I	GCTNAGC	1 cut(s)	66
BspACI	CCGC	9 cut(s)	5, 56, 114, 238, 240, 268, 340, 354, 740
BspANI	GGCC	2 cut(s)	110, 194
BspCNI	CTCAG	6 cut(s)	58, 412, 448, 482, 499, 763
BspFNI	CGCG	5 cut(s)	56, 240, 270, 340, 591
BspLI	GGNNCC	3 cut(s)	436, 513, 777
BspPI	GGATC	2 cut(s)	259, 273
BspT107I	GGYRCC	2 cut(s)	434, 511
BspTNI	GGTCTC	2 cut(s)	109, 284
BsrDI	GCAATG	1 cut(s)	492
BsrFI	RCCGGY	2 cut(s)	362, 431
BsrGI	TGTACA	1 cut(s)	39
BsrI	ACTGG	1 cut(s)	513
BssAI	RCCGGY	2 cut(s)	362, 431
BssECI	CCNNGG	3 cut(s)	135, 238, 372
BssMI	GATC	5 cut(s)	177, 264, 278, 285, 586
BssT1I	CCWWGG	1 cut(s)	372
Bst2UI	CCWGG	1 cut(s)	199
Bst4CI	ACNGT	1 cut(s)	136
Bst6I	CTCTTC	1 cut(s)	24
BstAUI	TGTACA	1 cut(s)	39
BstC8I	GCNNGC	5 cut(s)	54, 63, 187, 364, 595
BstDEI	CTNAG	6 cut(s)	66, 420, 456, 469, 486, 771
BstDSI	CCRYGG	2 cut(s)	135, 238
BstF5I	GGATG	4 cut(s)	345, 520, 736, 748
BstFNI	CGCG	5 cut(s)	56, 240, 270, 340, 591
BstH2I	RGCGCY	2 cut(s)	73, 186
BstHHI	GCGC	6 cut(s)	72, 147, 185, 204, 444, 593
BstKTI	GATC	5 cut(s)	180, 267, 281, 288, 589
BstMAI	GTCTC	2 cut(s)	109, 284
BstMBI	GATC	5 cut(s)	177, 264, 278, 285, 586
BstNI	CCWGG	1 cut(s)	199
BstNSI	RCATGY	1 cut(s)	727
BstSCI	CCNGG	2 cut(s)	189, 197
BstUI	CGCG	5 cut(s)	56, 240, 270, 340, 591
BstV1I	GCAGC	4 cut(s)	315, 439, 469, 770
BstV2I	GAAGAC	1 cut(s)	370
Bsu36I	CCTNAGG	1 cut(s)	771
BsuRI	GGCC	2 cut(s)	110, 194
BtgI	CCRYGG	2 cut(s)	135, 238
BtgZI	GCGATG	2 cut(s)	327, 392
BtsCI	GGATG	4 cut(s)	345, 520, 736, 748
Cac8I	GCNNGC	5 cut(s)	54, 63, 187, 364, 595
CfoI	GCGC	6 cut(s)	72, 147, 185, 204, 444, 593
Cfr10I	RCCGGY	2 cut(s)	362, 431
Cfr13I	GGNCC	2 cut(s)	192, 714
Cfr42I	CCGCGG	1 cut(s)	241
Csp6I	GTAC	1 cut(s)	40
CviAII	CATG	4 cut(s)	43, 254, 262, 724
CviQI	GTAC	1 cut(s)	40
DdeI	CTNAG	6 cut(s)	66, 420, 456, 469, 486, 771
DpnI	GATC	5 cut(s)	179, 266, 280, 287, 588
DpnII	GATC	5 cut(s)	177, 264, 278, 285, 586
DraIII	CACNNNGTG	1 cut(s)	711
DrdI	GACNNNNNNGTC	2 cut(s)	254, 374
DseDI	GACNNNNNNGTC	2 cut(s)	254, 374
Eam1104I	CTCTTC	1 cut(s)	24
EarI	CTCTTC	1 cut(s)	24
EciI	GGCGGA	3 cut(s)	103, 343, 755
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	1 cut(s)	372
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	2 cut(s)	109, 284
Eco47I	GGWCC	1 cut(s)	714
Eco47III	AGCGCT	1 cut(s)	71
Eco53kI	GAGCTC	1 cut(s)	298
Eco81I	CCTNAGG	1 cut(s)	771
EcoICRI	GAGCTC	1 cut(s)	298
EcoRII	CCWGG	1 cut(s)	197
EcoT14I	CCWWGG	1 cut(s)	372
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	372
FaeI	CATG	4 cut(s)	46, 257, 265, 727
FaiI	YATR	6 cut(s)	44, 255, 263, 567, 661, 725
FatI	CATG	4 cut(s)	42, 253, 261, 723
Fnu4HI	GCNGC	8 cut(s)	6, 238, 241, 329, 341, 453, 483, 759
FokI	GGATG	4 cut(s)	332, 507, 743, 755
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	8 cut(s)	6, 238, 241, 329, 341, 453, 483, 759
GlaI	GCGC	6 cut(s)	71, 146, 184, 203, 443, 592
GluI	GCNGC	8 cut(s)	6, 238, 241, 329, 341, 453, 483, 759
HaeII	RGCGCY	2 cut(s)	73, 186
HaeIII	GGCC	2 cut(s)	110, 194
HapII	CCGG	3 cut(s)	190, 363, 432
HhaI	GCGC	6 cut(s)	72, 147, 185, 204, 444, 593
Hin1II	CATG	4 cut(s)	46, 257, 265, 727
Hin6I	GCGC	6 cut(s)	70, 145, 183, 202, 442, 591
HinP1I	GCGC	6 cut(s)	70, 145, 183, 202, 442, 591
HinfI	GANTC	4 cut(s)	335, 368, 571, 656
HpaII	CCGG	3 cut(s)	190, 363, 432
Hpy166II	GTNNAC	2 cut(s)	40, 714
Hpy188I	TCNGA	2 cut(s)	576, 721
Hpy188III	TCNNGA	5 cut(s)	97, 289, 388, 427, 488
Hpy8I	GTNNAC	2 cut(s)	40, 714
Hpy99I	CGWCG	3 cut(s)	98, 164, 251
HpyAV	CCTTC	5 cut(s)	94, 220, 360, 367, 388
HpyCH4III	ACNGT	1 cut(s)	136
HpyCH4IV	ACGT	2 cut(s)	36, 174
HpyCH4V	TGCA	4 cut(s)	503, 597, 685, 727
HpyF3I	CTNAG	6 cut(s)	66, 420, 456, 469, 486, 771
HpySE526I	ACGT	2 cut(s)	36, 174
Hsp92II	CATG	4 cut(s)	46, 257, 265, 727
HspAI	GCGC	6 cut(s)	70, 145, 183, 202, 442, 591
KroI	GCCGGC	1 cut(s)	362
KroNI	GCCGGC	1 cut(s)	364
KspI	CCGCGG	1 cut(s)	241
Kzo9I	GATC	5 cut(s)	177, 264, 278, 285, 586
LmnI	GCTCC	3 cut(s)	58, 127, 142
Lsp1109I	GCAGC	4 cut(s)	315, 439, 469, 770
LweI	GCATC	2 cut(s)	213, 529
MaeII	ACGT	2 cut(s)	36, 174
MaeIII	GTNAC	1 cut(s)	695
MalI	GATC	5 cut(s)	179, 266, 280, 287, 588
MboI	GATC	5 cut(s)	177, 264, 278, 285, 586
MboII	GAAGA	2 cut(s)	41, 370
MhlI	GDGCHC	2 cut(s)	300, 464
MlyI	GAGTC	3 cut(s)	329, 362, 665
MmeI	TCCRAC	2 cut(s)	327, 618
MreI	CGCCGGCG	1 cut(s)	362
MroNI	GCCGGC	1 cut(s)	362
MseI	TTAA	1 cut(s)	750
MspA1I	CMGCKG	1 cut(s)	240
MspI	CCGG	3 cut(s)	190, 363, 432
MspR9I	CCNGG	2 cut(s)	191, 199
Mva1269I	GAATGC	1 cut(s)	318
MvaI	CCWGG	1 cut(s)	199
MvnI	CGCG	5 cut(s)	56, 240, 270, 340, 591
NaeI	GCCGGC	1 cut(s)	364
NciI	CCSGG	1 cut(s)	191
NdeII	GATC	5 cut(s)	177, 264, 278, 285, 586
NgoMIV	GCCGGC	1 cut(s)	362
NlaIII	CATG	4 cut(s)	46, 257, 265, 727
NlaIV	GGNNCC	3 cut(s)	436, 513, 777
NmeAIII	GCCGAG	2 cut(s)	86, 627
NmuCI	GTSAC	1 cut(s)	695
NspI	RCATGY	1 cut(s)	727
PctI	GAATGC	1 cut(s)	318
PdiI	GCCGGC	1 cut(s)	364
PfeI	GAWTC	1 cut(s)	571
PflFI	GACNNNGTC	1 cut(s)	254
PkrI	GCNGC	8 cut(s)	7, 239, 242, 330, 342, 454, 484, 760
PleI	GAGTC	3 cut(s)	329, 362, 664
PpsI	GAGTC	3 cut(s)	329, 362, 664
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	1 cut(s)	197
PspGI	CCWGG	1 cut(s)	197
PspN4I	GGNNCC	3 cut(s)	436, 513, 777
PspPI	GGNCC	2 cut(s)	192, 714
PsyI	GACNNNGTC	1 cut(s)	254
RsaI	GTAC	1 cut(s)	41
RsaNI	GTAC	1 cut(s)	40
SacI	GAGCTC	1 cut(s)	300
SacII	CCGCGG	1 cut(s)	241
SaqAI	TTAA	1 cut(s)	750
SatI	GCNGC	8 cut(s)	6, 238, 241, 329, 341, 453, 483, 759
Sau3AI	GATC	5 cut(s)	177, 264, 278, 285, 586
Sau96I	GGNCC	2 cut(s)	192, 714
SchI	GAGTC	3 cut(s)	329, 362, 665
ScrFI	CCNGG	2 cut(s)	191, 199
SduI	GDGCHC	2 cut(s)	300, 464
SfaNI	GCATC	2 cut(s)	213, 529
Sfr303I	CCGCGG	1 cut(s)	241
SgrAI	CRCCGGYG	1 cut(s)	362
SgrBI	CCGCGG	1 cut(s)	241
SinI	GGWCC	1 cut(s)	714
SmlI	CTYRAG	2 cut(s)	323, 386
SmoI	CTYRAG	2 cut(s)	323, 386
SsiI	CCGC	9 cut(s)	5, 56, 114, 238, 240, 268, 340, 354, 740
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	2 cut(s)	189, 197
StyI	CCWWGG	1 cut(s)	372
TaaI	ACNGT	1 cut(s)	136
TaiI	ACGT	2 cut(s)	39, 177
TaqI	TCGA	4 cut(s)	96, 219, 288, 333
TaqII	GACCGA	1 cut(s)	308
TatI	WGTACW	1 cut(s)	39
TauI	GCSGC	4 cut(s)	8, 240, 243, 343
TfiI	GAWTC	1 cut(s)	571
Tru1I	TTAA	1 cut(s)	750
Tru9I	TTAA	1 cut(s)	750
TseFI	GTSAC	1 cut(s)	695
TseI	GCWGC	4 cut(s)	328, 452, 482, 758
Tsp45I	GTSAC	1 cut(s)	695
TspDTI	ATGAA	1 cut(s)	407
TspGWI	ACGGA	3 cut(s)	148, 518, 683
Tth111I	GACNNNGTC	1 cut(s)	254
VpaK11BI	GGWCC	1 cut(s)	714
XceI	RCATGY	1 cut(s)	727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.