Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007005

Physical Location & Seq

Genomic Coordinates Forward (+)

45588403 .. 45590135

Gene Structure 1733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1373400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGGCGGCAACCACCCCCTCCCCCCGCGAAGAGAACGTCTACATGGCCAAGCTCGCCGAGCAAGCCGAGCGCTACGAGGAGATGGTCGAGTTCGTCGAGAAGGTCTCCGCCTCCGCCGAGAAAGAGGAGCTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTGATCGGCGCCCGCCGTGCCTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGCGGCAATGACGACCACGTCGCCTTGATCCGCGACTACCGATCCAAGATCGAGACCGAGCTCTCCAACATCTGCGACGGCATTCTCAAGCTCCTCGACTCCAGGCTCATCCCCTCCGCCTGCCCCGGCGACTCCAAGGTCTTTTATCTCAAGATGAAGGGCGATTACCACCGTTATCTTGCCGAGTTCAAGACCGGCGCTGAGCGCAAGGAGGCCGCCGAAAGCACCCTCTCCGCCTACAAGGCCGCTCAGGACATTGCCAATGCCGAACTGGCACCAACGCATCCAATCCGCCTGGGGTTGGCTCTCAACTTCTCTGTGTTTTACTATGAGATTCTGAACTCTCCTGACCGCGCCTGCAGTCTCGCCAAACAGGCTTTTGATGAGGCGATCGCAGAGTTGGACACTCTCGGAGAGGAGTCATACAAGGACAGCACTTTGATAATGCAACTTCTCCGTGATAACCTCACCCTGTGGACCTCTGACATGCAGGACGATGGGGCTGATGAGATTAAAGAAGCAGCGCCCAAGCCCACCGAGGAACCAAAACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0019222 GO:0023052 GO:0031090 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

264

Amino Acids

29.6

Weight (kDa)

4.77

Isoelectric Point (pI)

52.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
14-3-3	PF00244	15 - 239	1.5e-105	14-3-3 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35160 AT1G35160 AT1G78300 AT4G09000 AT4G09000
fragaria_vesca	FvH4_5g36710
malus_domestica	MD00G1018600.v1.1 MD08G1187400.v1.1 MD10G1084500.v1.1 MD15G1373400.v1.1
prunus_persica	Prupe.1G521900_v2.0.a1 Prupe.8G064700_v2.0.a1
pyrus_communis	pycom05g06310 pycom08g16100 pycom15g33450
rosa_chinensis	RchiOBHm_Chr7g0242691
rosa_laevigata	RLG00000000887
rosa_multiflora	Rmu_sc0017298.1_g000001
rosa_roxburghii	Rroxscaffold_3G00222580
rosa_rugosa	Rorug07G0316300
rosa_samantha	Rh7AG471300 Rh7BG441600 Rh7CG488300 Rh7DG456900
rosa_wichuraiana	Rw7G039230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	254, 374
AccB1I	GGYRCC	2 cut(s)	182, 511
AccBSI	CCGCTC	1 cut(s)	485
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	4 cut(s)	27, 240, 270, 591
AclWI	GGATC	2 cut(s)	259, 273
AcoI	YGGCCR	1 cut(s)	45
AcyI	GRCGYC	1 cut(s)	183
AdeI	CACNNNGTG	1 cut(s)	711
AfeI	AGCGCT	1 cut(s)	71
AfiI	CCNNNNNNNGG	1 cut(s)	538
AgsI	TTSAA	1 cut(s)	427
AjiI	CACGTC	1 cut(s)	256
AjnI	CCWGG	3 cut(s)	197, 338, 531
AluBI	AGCT	4 cut(s)	52, 130, 298, 328
AluI	AGCT	4 cut(s)	52, 130, 298, 328
Alw21I	GWGCWC	2 cut(s)	132, 300
Alw26I	GTCTC	3 cut(s)	109, 284, 605
AlwI	GGATC	2 cut(s)	259, 273
Aor51HI	AGCGCT	1 cut(s)	71
AoxI	GGCC	3 cut(s)	45, 450, 480
ApeKI	GCWGC	1 cut(s)	758
ArsI	GACNNNNNNTTYG	2 cut(s)	21, 53
AsiSI	GCGATCGC	1 cut(s)	630
AspLEI	GCGC	8 cut(s)	72, 147, 185, 204, 437, 444, 593, 763
AspS9I	GGNCC	1 cut(s)	714
AsuC2I	CCSGG	1 cut(s)	363
AsuHPI	GGTGA	2 cut(s)	124, 697
AvaII	GGWCC	1 cut(s)	714
BalI	TGGCCA	1 cut(s)	47
BanI	GGYRCC	2 cut(s)	182, 511
BanII	GRGCYC	2 cut(s)	132, 300
BarI	GAAGNNNNNNTAC	2 cut(s)	386, 418
Bbv12I	GWGCWC	2 cut(s)	132, 300
BbvI	GCAGC	1 cut(s)	770
BccI	CCATC	3 cut(s)	76, 224, 728
BceAI	ACGGC	2 cut(s)	174, 331
BciT130I	CCWGG	3 cut(s)	199, 340, 533
BcnI	CCSGG	1 cut(s)	363
BcoDI	GTCTC	3 cut(s)	109, 284, 605
BfmI	CTRYAG	1 cut(s)	595
BfoI	RGCGCY	4 cut(s)	73, 186, 438, 764
BglI	GCCNNNNNGGC	3 cut(s)	479, 509, 611
BisI	GCNGC	6 cut(s)	6, 238, 241, 453, 483, 759
BlpI	GCTNAGC	1 cut(s)	438
BlsI	GCNGC	6 cut(s)	7, 239, 242, 454, 484, 760
Bme1390I	CCNGG	4 cut(s)	199, 340, 363, 533
Bme18I	GGWCC	1 cut(s)	714
BmgBI	CACGTC	1 cut(s)	256
BmgT120I	GGNCC	1 cut(s)	714
BmiI	GGNNCC	3 cut(s)	184, 513, 780
BmrFI	CCNGG	4 cut(s)	199, 340, 363, 533
BmsI	GCATC	2 cut(s)	213, 529
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
BpmI	CTGGAG	1 cut(s)	322
Bpu10I	CCTNAGC	1 cut(s)	486
Bpu1102I	GCTNAGC	1 cut(s)	438
BpuEI	CTTGAG	2 cut(s)	308, 371
BpuMI	CCSGG	1 cut(s)	363
BsaHI	GRCGYC	1 cut(s)	183
BsaI	GGTCTC	2 cut(s)	109, 284
BsaJI	CCNNGG	5 cut(s)	238, 361, 372, 532, 774
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bsc4I	CCNNNNNNNGG	1 cut(s)	538
Bse118I	RCCGGY	1 cut(s)	431
Bse1I	ACTGG	1 cut(s)	513
Bse3DI	GCAATG	2 cut(s)	250, 492
BseBI	CCWGG	3 cut(s)	199, 340, 533
BseDI	CCNNGG	5 cut(s)	238, 361, 372, 532, 774
BseGI	GGATG	2 cut(s)	345, 520
BseLI	CCNNNNNNNGG	1 cut(s)	538
BseMI	GCAATG	2 cut(s)	250, 492
BseMII	CTCAG	2 cut(s)	429, 500
BseNI	ACTGG	1 cut(s)	513
BseRI	GAGGAG	8 cut(s)	92, 140, 143, 155, 202, 245, 320, 668
BseXI	GCAGC	1 cut(s)	770
Bsh1236I	CGCG	4 cut(s)	27, 240, 270, 591
Bsh1285I	CGRYCG	1 cut(s)	630
BshFI	GGCC	3 cut(s)	47, 452, 482
BshNI	GGYRCC	2 cut(s)	182, 511
BsiEI	CGRYCG	1 cut(s)	630
BsiHKAI	GWGCWC	2 cut(s)	132, 300
BsiSI	CCGG	2 cut(s)	363, 432
BslI	CCNNNNNNNGG	1 cut(s)	538
BsmAI	GTCTC	3 cut(s)	109, 284, 605
BsmI	GAATGC	1 cut(s)	318
BsnI	GGCC	3 cut(s)	47, 452, 482
Bso31I	GGTCTC	2 cut(s)	109, 284
Bsp1286I	GDGCHC	2 cut(s)	132, 300
Bsp143I	GATC	5 cut(s)	177, 264, 278, 285, 627
Bsp1720I	GCTNAGC	1 cut(s)	438
BspANI	GGCC	3 cut(s)	47, 452, 482
BspCNI	CTCAG	2 cut(s)	430, 499
BspFNI	CGCG	4 cut(s)	27, 240, 270, 591
BspLI	GGNNCC	3 cut(s)	184, 513, 780
BspMAI	CTGCAG	1 cut(s)	599
BspPI	GGATC	2 cut(s)	259, 273
BspT107I	GGYRCC	2 cut(s)	182, 511
BspTNI	GGTCTC	2 cut(s)	109, 284
BsrBI	CCGCTC	1 cut(s)	485
BsrDI	GCAATG	2 cut(s)	250, 492
BsrFI	RCCGGY	1 cut(s)	431
BsrI	ACTGG	1 cut(s)	513
BssAI	RCCGGY	1 cut(s)	431
BssECI	CCNNGG	5 cut(s)	238, 361, 372, 532, 774
BssMI	GATC	5 cut(s)	177, 264, 278, 285, 627
BssNI	GRCGYC	1 cut(s)	183
BssT1I	CCWWGG	1 cut(s)	372
Bst2UI	CCWGG	3 cut(s)	199, 340, 533
Bst4CI	ACNGT	3 cut(s)	136, 410, 789
Bst6I	CTCTTC	1 cut(s)	24
BstACI	GRCGYC	1 cut(s)	183
BstC8I	GCNNGC	5 cut(s)	54, 63, 187, 358, 595
BstDEI	CTNAG	2 cut(s)	438, 486
BstDSI	CCRYGG	1 cut(s)	238
BstF5I	GGATG	2 cut(s)	345, 520
BstFNI	CGCG	4 cut(s)	27, 240, 270, 591
BstH2I	RGCGCY	4 cut(s)	73, 186, 438, 764
BstHHI	GCGC	8 cut(s)	72, 147, 185, 204, 437, 444, 593, 763
BstKTI	GATC	5 cut(s)	180, 267, 281, 288, 630
BstMAI	GTCTC	3 cut(s)	109, 284, 605
BstMBI	GATC	5 cut(s)	177, 264, 278, 285, 627
BstMCI	CGRYCG	1 cut(s)	630
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 58, 62, 67, 191, 441, 479, 509, 611
BstNI	CCWGG	3 cut(s)	199, 340, 533
BstNSI	RCATGY	1 cut(s)	727
BstSCI	CCNGG	4 cut(s)	197, 338, 361, 531
BstSFI	CTRYAG	1 cut(s)	595
BstUI	CGCG	4 cut(s)	27, 240, 270, 591
BstV1I	GCAGC	1 cut(s)	770
BsuRI	GGCC	3 cut(s)	47, 452, 482
BtgI	CCRYGG	1 cut(s)	238
BtrI	CACGTC	1 cut(s)	256
BtsCI	GGATG	2 cut(s)	345, 520
Cac8I	GCNNGC	5 cut(s)	54, 63, 187, 358, 595
CfoI	GCGC	8 cut(s)	72, 147, 185, 204, 437, 444, 593, 763
Cfr10I	RCCGGY	1 cut(s)	431
Cfr13I	GGNCC	1 cut(s)	714
Cfr42I	CCGCGG	1 cut(s)	241
CviAII	CATG	2 cut(s)	43, 724
DdeI	CTNAG	2 cut(s)	438, 486
DinI	GGCGCC	1 cut(s)	184
DpnI	GATC	5 cut(s)	179, 266, 280, 287, 629
DpnII	GATC	5 cut(s)	177, 264, 278, 285, 627
DraIII	CACNNNGTG	1 cut(s)	711
DrdI	GACNNNNNNGTC	2 cut(s)	254, 374
DseDI	GACNNNNNNGTC	2 cut(s)	254, 374
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	1 cut(s)	24
EarI	CTCTTC	1 cut(s)	24
EciI	GGCGGA	5 cut(s)	97, 103, 343, 460, 518
Ecl136II	GAGCTC	2 cut(s)	130, 298
Eco130I	CCWWGG	1 cut(s)	372
Eco24I	GRGCYC	2 cut(s)	132, 300
Eco31I	GGTCTC	2 cut(s)	109, 284
Eco47I	GGWCC	1 cut(s)	714
Eco47III	AGCGCT	1 cut(s)	71
Eco53kI	GAGCTC	2 cut(s)	130, 298
EcoICRI	GAGCTC	2 cut(s)	130, 298
EcoRII	CCWGG	3 cut(s)	197, 338, 531
EcoT14I	CCWWGG	1 cut(s)	372
EcoT38I	GRGCYC	2 cut(s)	132, 300
EgeI	GGCGCC	1 cut(s)	184
EheI	GGCGCC	1 cut(s)	184
ErhI	CCWWGG	1 cut(s)	372
FaeI	CATG	2 cut(s)	46, 727
FaiI	YATR	4 cut(s)	44, 567, 661, 725
FatI	CATG	2 cut(s)	42, 723
FauI	CCCGC	2 cut(s)	32, 194
FblI	GTMKAC	1 cut(s)	39
Fnu4HI	GCNGC	6 cut(s)	6, 238, 241, 453, 483, 759
FokI	GGATG	2 cut(s)	332, 507
FriOI	GRGCYC	2 cut(s)	132, 300
Fsp4HI	GCNGC	6 cut(s)	6, 238, 241, 453, 483, 759
GlaI	GCGC	8 cut(s)	71, 146, 184, 203, 436, 443, 592, 762
GluI	GCNGC	6 cut(s)	6, 238, 241, 453, 483, 759
GsuI	CTGGAG	1 cut(s)	322
HaeII	RGCGCY	4 cut(s)	73, 186, 438, 764
HaeIII	GGCC	3 cut(s)	47, 452, 482
HapII	CCGG	2 cut(s)	363, 432
HhaI	GCGC	8 cut(s)	72, 147, 185, 204, 437, 444, 593, 763
Hin1I	GRCGYC	1 cut(s)	183
Hin1II	CATG	2 cut(s)	46, 727
Hin6I	GCGC	8 cut(s)	70, 145, 183, 202, 435, 442, 591, 761
HinP1I	GCGC	8 cut(s)	70, 145, 183, 202, 435, 442, 591, 761
HinfI	GANTC	4 cut(s)	335, 368, 571, 656
HpaII	CCGG	2 cut(s)	363, 432
HphI	GGTGA	2 cut(s)	124, 697
Hpy166II	GTNNAC	2 cut(s)	40, 714
Hpy188I	TCNGA	3 cut(s)	576, 650, 721
Hpy188III	TCNNGA	6 cut(s)	97, 289, 388, 427, 488, 584
Hpy8I	GTNNAC	2 cut(s)	40, 714
Hpy99I	CGWCG	5 cut(s)	98, 140, 164, 260, 317
HpyAV	CCTTC	3 cut(s)	94, 220, 388
HpyCH4III	ACNGT	3 cut(s)	136, 410, 789
HpyCH4IV	ACGT	3 cut(s)	36, 174, 255
HpyCH4V	TGCA	3 cut(s)	597, 685, 727
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 58, 62, 67, 191, 441, 479, 509, 611
HpyF3I	CTNAG	2 cut(s)	438, 486
HpySE526I	ACGT	3 cut(s)	36, 174, 255
Hsp92I	GRCGYC	1 cut(s)	183
Hsp92II	CATG	2 cut(s)	46, 727
HspAI	GCGC	8 cut(s)	70, 145, 183, 202, 435, 442, 591, 761
KasI	GGCGCC	1 cut(s)	182
KspI	CCGCGG	1 cut(s)	241
Kzo9I	GATC	5 cut(s)	177, 264, 278, 285, 627
LmnI	GCTCC	3 cut(s)	127, 142, 333
Lsp1109I	GCAGC	1 cut(s)	770
LweI	GCATC	2 cut(s)	213, 529
MaeII	ACGT	3 cut(s)	36, 174, 255
MalI	GATC	5 cut(s)	179, 266, 280, 287, 629
MbiI	CCGCTC	1 cut(s)	485
MboI	GATC	5 cut(s)	177, 264, 278, 285, 627
MboII	GAAGA	1 cut(s)	41
MhlI	GDGCHC	2 cut(s)	132, 300
MlsI	TGGCCA	1 cut(s)	47
MluNI	TGGCCA	1 cut(s)	47
Mly113I	GGCGCC	1 cut(s)	183
MlyI	GAGTC	3 cut(s)	329, 362, 665
MmeI	TCCRAC	2 cut(s)	327, 618
Mox20I	TGGCCA	1 cut(s)	47
MscI	TGGCCA	1 cut(s)	47
MseI	TTAA	1 cut(s)	750
Msp20I	TGGCCA	1 cut(s)	47
MspA1I	CMGCKG	1 cut(s)	240
MspI	CCGG	2 cut(s)	363, 432
MspR9I	CCNGG	4 cut(s)	199, 340, 363, 533
Mva1269I	GAATGC	1 cut(s)	318
MvaI	CCWGG	3 cut(s)	199, 340, 533
MvnI	CGCG	4 cut(s)	27, 240, 270, 591
MwoI	GCNNNNNNNGC	9 cut(s)	53, 58, 62, 67, 191, 441, 479, 509, 611
NarI	GGCGCC	1 cut(s)	183
NciI	CCSGG	1 cut(s)	363
NdeII	GATC	5 cut(s)	177, 264, 278, 285, 627
NlaIII	CATG	2 cut(s)	46, 727
NlaIV	GGNNCC	3 cut(s)	184, 513, 780
NmeAIII	GCCGAG	4 cut(s)	82, 91, 142, 445
NspI	RCATGY	1 cut(s)	727
PcsI	WCGNNNNNNNCGW	1 cut(s)	93
PctI	GAATGC	1 cut(s)	318
PfeI	GAWTC	1 cut(s)	571
PflFI	GACNNNGTC	1 cut(s)	254
PkrI	GCNGC	6 cut(s)	7, 239, 242, 454, 484, 760
Ple19I	CGATCG	1 cut(s)	630
PleI	GAGTC	3 cut(s)	329, 362, 664
PluTI	GGCGCC	1 cut(s)	186
PpsI	GAGTC	3 cut(s)	329, 362, 664
Psp124BI	GAGCTC	2 cut(s)	132, 300
Psp6I	CCWGG	3 cut(s)	197, 338, 531
PspGI	CCWGG	3 cut(s)	197, 338, 531
PspN4I	GGNNCC	3 cut(s)	184, 513, 780
PspPI	GGNCC	1 cut(s)	714
PstI	CTGCAG	1 cut(s)	599
PsyI	GACNNNGTC	1 cut(s)	254
PvuI	CGATCG	1 cut(s)	630
RgaI	GCGATCGC	1 cut(s)	630
SacI	GAGCTC	2 cut(s)	132, 300
SacII	CCGCGG	1 cut(s)	241
SaqAI	TTAA	1 cut(s)	750
SatI	GCNGC	6 cut(s)	6, 238, 241, 453, 483, 759
Sau3AI	GATC	5 cut(s)	177, 264, 278, 285, 627
Sau96I	GGNCC	1 cut(s)	714
SchI	GAGTC	3 cut(s)	329, 362, 665
ScrFI	CCNGG	4 cut(s)	199, 340, 363, 533
SduI	GDGCHC	2 cut(s)	132, 300
SfaAI	GCGATCGC	1 cut(s)	630
SfaNI	GCATC	2 cut(s)	213, 529
SfcI	CTRYAG	1 cut(s)	595
SfoI	GGCGCC	1 cut(s)	184
Sfr303I	CCGCGG	1 cut(s)	241
SgfI	GCGATCGC	1 cut(s)	630
SgrBI	CCGCGG	1 cut(s)	241
SinI	GGWCC	1 cut(s)	714
SmlI	CTYRAG	2 cut(s)	323, 386
SmoI	CTYRAG	2 cut(s)	323, 386
SspDI	GGCGCC	1 cut(s)	182
SstI	GAGCTC	2 cut(s)	132, 300
StyD4I	CCNGG	4 cut(s)	197, 338, 361, 531
StyI	CCWWGG	1 cut(s)	372
TaaI	ACNGT	3 cut(s)	136, 410, 789
TaiI	ACGT	3 cut(s)	39, 177, 258
TaqI	TCGA	6 cut(s)	87, 96, 138, 219, 288, 333
TaqII	GACCGA	1 cut(s)	308
TauI	GCSGC	5 cut(s)	8, 240, 243, 455, 485
TfiI	GAWTC	1 cut(s)	571
Tru1I	TTAA	1 cut(s)	750
Tru9I	TTAA	1 cut(s)	750
TseI	GCWGC	1 cut(s)	758
TspDTI	ATGAA	1 cut(s)	407
TspGWI	ACGGA	2 cut(s)	148, 683
Tth111I	GACNNNGTC	1 cut(s)	254
VpaK11BI	GGWCC	1 cut(s)	714
XceI	RCATGY	1 cut(s)	727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	505
XmiI	GTMKAC	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.