Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007005

Physical Location & Seq

Genomic Coordinates Forward (+)

9565391 .. 9568209

Gene Structure 2819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G064700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 789 bp

ATGGCTACCCCATCCCCACGCGAAGAGAACGTATACGTGGCCAAGCTGGCCGAGCAAGCGGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCGTCTCCTCCGTCCCCGAAGGCGAAGAACCCACAGTCGAAGAGCGCAACCTCCTCTCCGTCGCCTATAAGAACGTGATCGGCGCTCGCCGTGCCTCGTGGCGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACAGCGATCACGTGGCCACCATCAAGGACTACAGGGCACGGATCGAGAACGAGCTCTCTAACATCTGCGGTGGGATTCTCAAGCTTCTTGACTCCAAGCTCGTGCCGTCGGCCAACGTCGGCGATTCCAAGGTGTTTTATCTGAAGATGAAGGGAGATTACCATAGGTATTTGGCTGAATTCAAGACTGGAAATGAGCGTAAGGAGGCTGCTGAGAATACCCTCAATGCCTATAAGGCTGCTCAGGATATCGCGAACTCTGAGCTGGCCCCAACTCATCCCATCCGTTTAGGATTGGCTTTGAACTTCTCTGTGTTTTACTACGAGATTTTAAATTCTCCCGATCGGGCTTGCAATCTTGCCAAGCAGGCTTTTGATGAAGCCATTGCAGAGCTGGACACACTGGGAGAGGATTCGTACAAGGATAGCACTTTGATAATGCAACTTCTTCGTGATAATCTCACATTGTGGACTTCAGATATGCAGGATGACGGAGCAGATGAGATCAAAGAAGCTGCACCCAAGCCTCAGGCTGAGCAGCAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

263

Amino Acids

29.47

Weight (kDa)

4.78

Isoelectric Point (pI)

45.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35160 AT1G35160 AT1G78300 AT4G09000 AT4G09000
fragaria_vesca	FvH4_5g36710
malus_domestica	MD00G1018600.v1.1 MD08G1187400.v1.1 MD10G1084500.v1.1 MD15G1373400.v1.1
prunus_persica	Prupe.1G521900_v2.0.a1 Prupe.8G064700_v2.0.a1
pyrus_communis	pycom05g06310 pycom08g16100 pycom15g33450
rosa_chinensis	RchiOBHm_Chr7g0242691
rosa_laevigata	RLG00000000887
rosa_multiflora	Rmu_sc0017298.1_g000001
rosa_roxburghii	Rroxscaffold_3G00222580
rosa_rugosa	Rorug07G0316300
rosa_samantha	Rh7AG471300 Rh7BG441600 Rh7CG488300 Rh7DG456900
rosa_wichuraiana	Rw7G039230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	33
AccII	CGCG	3 cut(s)	21, 237, 494
AciI	CCGC	4 cut(s)	59, 235, 237, 309
AclWI	GGATC	1 cut(s)	290
AcoI	YGGCCR	4 cut(s)	39, 48, 255, 351
AcsI	RAATTY	2 cut(s)	419, 574
AcuI	CTGAAG	2 cut(s)	404, 699
AcvI	CACGTG	1 cut(s)	253
AdeI	CACNNNGTG	1 cut(s)	708
AfaI	GTAC	1 cut(s)	659
AfeI	AGCGCT	1 cut(s)	65
AgsI	TTSAA	2 cut(s)	424, 544
AluBI	AGCT	7 cut(s)	46, 295, 325, 340, 505, 634, 755
AluI	AGCT	7 cut(s)	46, 295, 325, 340, 505, 634, 755
Alw21I	GWGCWC	1 cut(s)	297
Alw26I	GTCTC	1 cut(s)	106
AlwI	GGATC	1 cut(s)	290
Aor51HI	AGCGCT	1 cut(s)	65
AoxI	GGCC	5 cut(s)	39, 48, 255, 351, 507
ApeKI	GCWGC	5 cut(s)	449, 479, 755, 778, 781
ApoI	RAATTY	2 cut(s)	419, 574
AspLEI	GCGC	4 cut(s)	66, 144, 182, 201
AspS9I	GGNCC	1 cut(s)	508
AxyI	CCTNAGG	1 cut(s)	768
BaeGI	GKGCMC	1 cut(s)	280
BalI	TGGCCA	2 cut(s)	41, 257
BanII	GRGCYC	1 cut(s)	297
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BauI	CACGAG	2 cut(s)	193, 341
BbrPI	CACGTG	1 cut(s)	253
Bbv12I	GWGCWC	1 cut(s)	297
BbvI	GCAGC	3 cut(s)	436, 466, 742
BccI	CCATC	4 cut(s)	19, 70, 269, 530
BceAI	ACGGC	2 cut(s)	171, 331
BcgI	CGANNNNNNTGC	2 cut(s)	671, 705
BcoDI	GTCTC	1 cut(s)	106
BfmI	CTRYAG	1 cut(s)	271
BfoI	RGCGCY	2 cut(s)	67, 183
BglI	GCCNNNNNGGC	3 cut(s)	47, 476, 608
BisI	GCNGC	7 cut(s)	235, 238, 450, 480, 756, 779, 782
BlpI	GCTNAGC	1 cut(s)	774
BlsI	GCNGC	7 cut(s)	236, 239, 451, 481, 757, 780, 783
BmgT120I	GGNCC	1 cut(s)	508
BmiI	GGNNCC	1 cut(s)	510
BmrI	ACTGGG	1 cut(s)	653
BmsI	GCATC	1 cut(s)	210
BmuI	ACTGGG	1 cut(s)	653
Bpu10I	CCTNAGC	1 cut(s)	483
Bpu1102I	GCTNAGC	1 cut(s)	774
BpuEI	CTTGAG	1 cut(s)	305
BsaAI	YACGTR	2 cut(s)	37, 253
BsaJI	CCNNGG	2 cut(s)	235, 369
BsaXI	ACNNNNNCTCC	2 cut(s)	137, 167
Bse1I	ACTGG	2 cut(s)	433, 648
Bse21I	CCTNAGG	1 cut(s)	768
Bse3DI	GCAATG	1 cut(s)	624
BseDI	CCNNGG	2 cut(s)	235, 369
BseGI	GGATG	4 cut(s)	11, 517, 522, 733
BseMI	GCAATG	1 cut(s)	624
BseMII	CTCAG	5 cut(s)	444, 492, 497, 765, 782
BseNI	ACTGG	2 cut(s)	433, 648
BseRI	GAGGAG	4 cut(s)	86, 94, 140, 242
BseSI	GKGCMC	1 cut(s)	280
BseXI	GCAGC	3 cut(s)	436, 466, 742
BsgI	GTGCAG	1 cut(s)	741
Bsh1236I	CGCG	3 cut(s)	21, 237, 494
Bsh1285I	CGRYCG	2 cut(s)	216, 586
BshFI	GGCC	5 cut(s)	41, 50, 257, 353, 509
BsiEI	CGRYCG	2 cut(s)	216, 586
BsiHKAI	GWGCWC	1 cut(s)	297
BslFI	GGGAC	1 cut(s)	95
BsmAI	GTCTC	1 cut(s)	106
BsmBI	CGTCTC	1 cut(s)	106
BsmFI	GGGAC	1 cut(s)	95
BsnI	GGCC	5 cut(s)	41, 50, 257, 353, 509
Bsp1286I	GDGCHC	2 cut(s)	280, 297
Bsp143I	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
Bsp1720I	GCTNAGC	1 cut(s)	774
Bsp68I	TCGCGA	1 cut(s)	494
BspACI	CCGC	4 cut(s)	59, 235, 237, 309
BspANI	GGCC	5 cut(s)	41, 50, 257, 353, 509
BspCNI	CTCAG	5 cut(s)	445, 493, 496, 766, 781
BspFNI	CGCG	3 cut(s)	21, 237, 494
BspLI	GGNNCC	1 cut(s)	510
BspPI	GGATC	1 cut(s)	290
BspQI	GCTCTTC	1 cut(s)	132
BsrDI	GCAATG	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	433, 648
BssECI	CCNNGG	2 cut(s)	235, 369
BssMI	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
BssNAI	GTATAC	1 cut(s)	34
BssSI	CACGAG	2 cut(s)	193, 341
BssT1I	CCWWGG	1 cut(s)	369
Bst1107I	GTATAC	1 cut(s)	34
Bst2BI	CACGAG	2 cut(s)	193, 341
Bst4CI	ACNGT	1 cut(s)	133
Bst6I	CTCTTC	2 cut(s)	18, 132
BstBAI	YACGTR	2 cut(s)	37, 253
BstC8I	GCNNGC	6 cut(s)	48, 57, 184, 507, 592, 609
BstDEI	CTNAG	5 cut(s)	453, 483, 501, 768, 774
BstDSI	CCRYGG	1 cut(s)	235
BstF5I	GGATG	4 cut(s)	11, 517, 522, 733
BstFNI	CGCG	3 cut(s)	21, 237, 494
BstH2I	RGCGCY	2 cut(s)	67, 183
BstHHI	GCGC	4 cut(s)	66, 144, 182, 201
BstKTI	GATC	6 cut(s)	177, 216, 250, 285, 586, 747
BstMAI	GTCTC	1 cut(s)	106
BstMBI	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
BstMCI	CGRYCG	2 cut(s)	216, 586
BstMWI	GCNNNNNNNGC	8 cut(s)	47, 52, 56, 61, 188, 243, 476, 608
BstSFI	CTRYAG	1 cut(s)	271
BstSLI	GKGCMC	1 cut(s)	280
BstUI	CGCG	3 cut(s)	21, 237, 494
BstV1I	GCAGC	3 cut(s)	436, 466, 742
BstZ17I	GTATAC	1 cut(s)	34
Bsu36I	CCTNAGG	1 cut(s)	768
BsuRI	GGCC	5 cut(s)	41, 50, 257, 353, 509
BtgI	CCRYGG	1 cut(s)	235
BtsCI	GGATG	4 cut(s)	11, 517, 522, 733
BtsIMutI	CAGTG	1 cut(s)	641
BtuMI	TCGCGA	1 cut(s)	494
Cac8I	GCNNGC	6 cut(s)	48, 57, 184, 507, 592, 609
CfoI	GCGC	4 cut(s)	66, 144, 182, 201
Cfr13I	GGNCC	1 cut(s)	508
Cfr42I	CCGCGG	1 cut(s)	238
Csp6I	GTAC	1 cut(s)	658
CviAII	CATG	1 cut(s)	88
CviQI	GTAC	1 cut(s)	658
DdeI	CTNAG	5 cut(s)	453, 483, 501, 768, 774
DpnI	GATC	6 cut(s)	176, 215, 249, 284, 585, 746
DpnII	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
DraI	TTTAAA	1 cut(s)	573
DraIII	CACNNNGTG	1 cut(s)	708
EaeI	YGGCCR	4 cut(s)	39, 48, 255, 351
Eam1104I	CTCTTC	2 cut(s)	18, 132
EarI	CTCTTC	2 cut(s)	18, 132
Ecl136II	GAGCTC	1 cut(s)	295
Eco130I	CCWWGG	1 cut(s)	369
Eco24I	GRGCYC	1 cut(s)	297
Eco32I	GATATC	1 cut(s)	490
Eco47III	AGCGCT	1 cut(s)	65
Eco53kI	GAGCTC	1 cut(s)	295
Eco57I	CTGAAG	2 cut(s)	404, 699
Eco72I	CACGTG	1 cut(s)	253
Eco81I	CCTNAGG	1 cut(s)	768
EcoICRI	GAGCTC	1 cut(s)	295
EcoRI	GAATTC	1 cut(s)	419
EcoRV	GATATC	1 cut(s)	490
EcoT14I	CCWWGG	1 cut(s)	369
EcoT38I	GRGCYC	1 cut(s)	297
ErhI	CCWWGG	1 cut(s)	369
Esp3I	CGTCTC	1 cut(s)	106
FaeI	CATG	1 cut(s)	91
FaiI	YATR	6 cut(s)	34, 89, 165, 405, 474, 722
FaqI	GGGAC	1 cut(s)	95
FatI	CATG	1 cut(s)	87
FblI	GTMKAC	1 cut(s)	33
Fnu4HI	GCNGC	7 cut(s)	235, 238, 450, 480, 756, 779, 782
FokI	GGATG	3 cut(s)	504, 509, 740
FriOI	GRGCYC	1 cut(s)	297
Fsp4HI	GCNGC	7 cut(s)	235, 238, 450, 480, 756, 779, 782
GlaI	GCGC	4 cut(s)	65, 143, 181, 200
GluI	GCNGC	7 cut(s)	235, 238, 450, 480, 756, 779, 782
HaeII	RGCGCY	2 cut(s)	67, 183
HaeIII	GGCC	5 cut(s)	41, 50, 257, 353, 509
HhaI	GCGC	4 cut(s)	66, 144, 182, 201
Hin1II	CATG	1 cut(s)	91
Hin6I	GCGC	4 cut(s)	64, 142, 180, 199
HinP1I	GCGC	4 cut(s)	64, 142, 180, 199
HindIII	AAGCTT	1 cut(s)	323
HinfI	GANTC	4 cut(s)	316, 332, 365, 653
Hpy166II	GTNNAC	2 cut(s)	34, 711
Hpy188I	TCNGA	3 cut(s)	384, 502, 718
Hpy188III	TCNNGA	7 cut(s)	286, 329, 424, 485, 493, 581, 692
Hpy8I	GTNNAC	2 cut(s)	34, 711
Hpy99I	CGWCG	4 cut(s)	161, 214, 352, 362
HpyAV	CCTTC	4 cut(s)	88, 110, 217, 385
HpyCH4III	ACNGT	1 cut(s)	133
HpyCH4IV	ACGT	5 cut(s)	30, 36, 171, 252, 357
HpyCH4V	TGCA	5 cut(s)	594, 629, 682, 724, 758
HpyF10VI	GCNNNNNNNGC	8 cut(s)	47, 52, 56, 61, 188, 243, 476, 608
HpyF3I	CTNAG	5 cut(s)	453, 483, 501, 768, 774
HpySE526I	ACGT	5 cut(s)	30, 36, 171, 252, 357
Hsp92II	CATG	1 cut(s)	91
HspAI	GCGC	4 cut(s)	64, 142, 180, 199
KspI	CCGCGG	1 cut(s)	238
Kzo9I	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
LguI	GCTCTTC	1 cut(s)	132
LmnI	GCTCC	2 cut(s)	61, 734
Lsp1109I	GCAGC	3 cut(s)	436, 466, 742
LweI	GCATC	1 cut(s)	210
MaeII	ACGT	5 cut(s)	30, 36, 171, 252, 357
MalI	GATC	6 cut(s)	176, 215, 249, 284, 585, 746
MboI	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
MboII	GAAGA	5 cut(s)	35, 134, 149, 397, 680
MhlI	GDGCHC	2 cut(s)	280, 297
MlsI	TGGCCA	2 cut(s)	41, 257
MluCI	AATT	2 cut(s)	419, 574
MluNI	TGGCCA	2 cut(s)	41, 257
MlyI	GAGTC	1 cut(s)	326
Mox20I	TGGCCA	2 cut(s)	41, 257
MscI	TGGCCA	2 cut(s)	41, 257
MseI	TTAA	1 cut(s)	572
Msp20I	TGGCCA	2 cut(s)	41, 257
MspA1I	CMGCKG	1 cut(s)	237
MvnI	CGCG	3 cut(s)	21, 237, 494
MwoI	GCNNNNNNNGC	8 cut(s)	47, 52, 56, 61, 188, 243, 476, 608
NdeII	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
NlaIII	CATG	1 cut(s)	91
NlaIV	GGNNCC	1 cut(s)	510
NmeAIII	GCCGAG	1 cut(s)	76
NruI	TCGCGA	1 cut(s)	494
PciSI	GCTCTTC	1 cut(s)	132
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PfeI	GAWTC	3 cut(s)	316, 365, 653
PkrI	GCNGC	7 cut(s)	236, 239, 451, 481, 757, 780, 783
Ple19I	CGATCG	2 cut(s)	216, 586
PleI	GAGTC	1 cut(s)	326
PmaCI	CACGTG	1 cut(s)	253
PmlI	CACGTG	1 cut(s)	253
PpsI	GAGTC	1 cut(s)	326
Ppu21I	YACGTR	2 cut(s)	37, 253
Psp124BI	GAGCTC	1 cut(s)	297
PspCI	CACGTG	1 cut(s)	253
PspN4I	GGNNCC	1 cut(s)	510
PspPI	GGNCC	1 cut(s)	508
PvuI	CGATCG	2 cut(s)	216, 586
RruI	TCGCGA	1 cut(s)	494
RsaI	GTAC	1 cut(s)	659
RsaNI	GTAC	1 cut(s)	658
SacI	GAGCTC	1 cut(s)	297
SacII	CCGCGG	1 cut(s)	238
SapI	GCTCTTC	1 cut(s)	132
SaqAI	TTAA	1 cut(s)	572
SatI	GCNGC	7 cut(s)	235, 238, 450, 480, 756, 779, 782
Sau3AI	GATC	6 cut(s)	174, 213, 247, 282, 583, 744
Sau96I	GGNCC	1 cut(s)	508
SchI	GAGTC	1 cut(s)	326
SduI	GDGCHC	2 cut(s)	280, 297
SfaNI	GCATC	1 cut(s)	210
SfcI	CTRYAG	1 cut(s)	271
SfiI	GGCCNNNNNGGCC	1 cut(s)	47
Sfr303I	CCGCGG	1 cut(s)	238
SgrBI	CCGCGG	1 cut(s)	238
SmlI	CTYRAG	1 cut(s)	320
SmoI	CTYRAG	1 cut(s)	320
Sse9I	AATT	2 cut(s)	419, 574
SsiI	CCGC	4 cut(s)	59, 235, 237, 309
SstI	GAGCTC	1 cut(s)	297
StyI	CCWWGG	1 cut(s)	369
TaaI	ACNGT	1 cut(s)	133
TaiI	ACGT	5 cut(s)	33, 39, 174, 255, 360
TaqI	TCGA	4 cut(s)	135, 212, 216, 285
TasI	AATT	2 cut(s)	419, 574
TauI	GCSGC	2 cut(s)	237, 240
TfiI	GAWTC	3 cut(s)	316, 365, 653
Tru1I	TTAA	1 cut(s)	572
Tru9I	TTAA	1 cut(s)	572
TscAI	CASTG	1 cut(s)	648
TseI	GCWGC	5 cut(s)	449, 479, 755, 778, 781
TspDTI	ATGAA	3 cut(s)	76, 404, 633
TspGWI	ACGGA	5 cut(s)	97, 145, 295, 515, 747
TspRI	CASTG	1 cut(s)	648
XapI	RAATTY	2 cut(s)	419, 574
XcmI	CCANNNNNNNNNTGG	1 cut(s)	631
XmiI	GTMKAC	1 cut(s)	33

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.