AT1G79820
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
30022260 .. 30027634
5375 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G79820.4

Sequence Viewer

Length: 1488 bp
ATGGATTCTGTTCGACGCACTTACACCATTATGCGAGGTCGTCACATAGACAAGCGTGTTCCTTCTAAAGAGTTTCTCTCTGCTTTGGATAAAGCTGAAACTGCAGTACGTCTTCCTACTGGGACGGGAAAAGACTGCGGGAATCCTTCCTGGAAGCGATCTCTGCCTCACGTGCTCGTTGCTTCTCTGACTTCGCTTTTATTCGGCTATCATCTCGGGGTTGTTAATGAAACTCTCGAAAGCATATCAATTGACCTTGGCTTTAGTGGGAACACCATAGCTGAAGGTCTTGTGGTTAGCACCTGCTTAGGCGGCGCCTTTATTGGGTCTCTGTTCAGTGGGTTGGTAGCTGATGGTGTTGGGCGCCGTAGAGCTTTCCAGTTGAGCGCTTTACCAATGATTGTTGGAGCTTCTGTGAGTGCATCAACTGAGAGTCTTATGGGCATGCTCCTGGGAAGGTTTTTGGTCGGAATTGGGATGGGCATAGGTCCTTCTGTTACAGCTCTCTATGTCACTGAGGTGTCACCTGCTTATGTGAGAGGTACATATGGGAGTTCTACCCAAATCGCAACATGTATTGGACTCTTAGGTTCGCTGTTTGCTGGAATCCCGGCAAAAGATAACTTGGGCTGGTGGCGCATATGTTTTTGGATATCCACAGTCCCAGCTGCAATGCTTGCTGTCTTCATGGAACTCTGCGTGGAAAGTCCTCAGTGGCTTTTTAAGAGGGGAAGGGCAGCTGAAGCTGAAGCTGTGTTTGAGAAGCTATTGGGAGGGTCGTACGTCAAAGCTGCTATGGCAGAGTTAGTGAAGTCGGATAGGGGAGATGACGCCGATTCAGCCAAATTGTCGGAGTTGCTTTTTGGACGCAGTTTTAGAGTGGTTTTCATTGGATCTACCCTTTTTGCTTTACAACAGTTGTCTGGGATAAATGCTGTGTTCTATTTCTCATCAACTGTCTTCAAGAAAGCTGGTGTACCTTCAGCCTCTGCAAACATATGTGTAGGAGTTTGCAACCTCTTAGGATCAACTGTTGCTGTGGTTTTGATGGATAAGCTGGGGAGAAAAGTGTTGCTTATTGGGAGTTTTGCGGGCATGGCAGTATCGCTGGGTCTCCAAGCAATAGCATATACTTCGCTTCCTTCGCCCTTTGGAACCTTGTTTCTCTCGGTTGGAGGAATGCTGCTGTTTGTGTTGTCGTTTGCAACTGGAGCGGGTCCTGTTCCAAGTCTTCTCCTGTCTGAGATATGCCCTGGTCGACTTCGAGCAACTGCGTTGGCTGTTTGTCTTGCCGTTCACTGGGTTATAAACTTCTTTGTCGGGCTGCTGTTTCTGAGAATGCTGGAGCAACTAGGTTCGGTGCTTCTAAATGCAATATTTGGGTTCTTCTGTGTGGTGGCAGTCATCTTTGTGCAGAAGAACGTGGTTGAGACTAAAGGAAAGAGCCTACAAGAGATAGAAATCAGTCTGCTCTCTTCCACCCAGTGA

Protein Analysis

495

Amino Acids

52.44

Weight (kDa)

9.06

Isoelectric Point (pI)

33.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 58 - 443 4.9e-75 Sugar (and other) transporter
MFS_1 PF07690 66 - 428 3.3e-18 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1307
AarI CACCTGC 2 cut(s) 311, 535
Acc36I ACCTGC 2 cut(s) 311, 535
AccB1I GGYRCC 2 cut(s) 314, 363
AccBSI CCGCTC 1 cut(s) 1214
AccI GTMKAC 1 cut(s) 1258
AciI CCGC 4 cut(s) 138, 312, 1091, 1214
AclWI GGATC 2 cut(s) 901, 1033
AcuI CTGAAG 4 cut(s) 303, 762, 768, 966
AcvI CACGTG 1 cut(s) 172
AcyI GRCGYC 3 cut(s) 315, 364, 831
AdeI CACNNNGTG 1 cut(s) 1485
AfaI GTAC 4 cut(s) 108, 544, 782, 978
AfeI AGCGCT 1 cut(s) 388
AfiI CCNNNNNNNGG 2 cut(s) 324, 1299
AflIII ACRYGT 1 cut(s) 572
AgsI TTSAA 1 cut(s) 964
AjnI CCWGG 3 cut(s) 149, 450, 1252
AleI CACNNNNGTG 1 cut(s) 518
Alw21I GWGCWC 1 cut(s) 177
Alw26I GTCTC 3 cut(s) 333, 1118, 1424
AlwI GGATC 2 cut(s) 901, 1033
AlwNI CAGNNNCTG 1 cut(s) 989
Ama87I CYCGRG 1 cut(s) 215
Aor51HI AGCGCT 1 cut(s) 388
ApeKI GCWGC 5 cut(s) 668, 737, 791, 1183, 1324
AspLEI GCGC 4 cut(s) 317, 366, 389, 639
AspS9I GGNCC 2 cut(s) 488, 1217
AsuC2I CCSGG 1 cut(s) 611
AsuHPI GGTGA 1 cut(s) 516
AvaI CYCGRG 1 cut(s) 215
AvaII GGWCC 2 cut(s) 488, 1217
BanI GGYRCC 2 cut(s) 314, 363
BbrPI CACGTG 1 cut(s) 172
BbsI GAAGAC 4 cut(s) 104, 676, 952, 1223
Bbv12I GWGCWC 1 cut(s) 177
BbvI GCAGC 5 cut(s) 655, 749, 778, 1170, 1311
BccI CCATC 3 cut(s) 347, 472, 1042
BceAI ACGGC 2 cut(s) 351, 1277
BcgI CGANNNNNNTGC 2 cut(s) 1116, 1150
BciT130I CCWGG 3 cut(s) 151, 452, 1254
BcnI CCSGG 1 cut(s) 611
BcoDI GTCTC 3 cut(s) 333, 1118, 1424
BfaI CTAG 1 cut(s) 1352
BfmI CTRYAG 1 cut(s) 102
BfoI RGCGCY 3 cut(s) 318, 367, 390
BfuAI ACCTGC 2 cut(s) 311, 535
BisI GCNGC 6 cut(s) 313, 669, 738, 792, 1184, 1325
BlsI GCNGC 6 cut(s) 314, 670, 739, 793, 1185, 1326
Bme1390I CCNGG 4 cut(s) 151, 452, 611, 1254
Bme18I GGWCC 2 cut(s) 488, 1217
BmeT110I CYCGRG 1 cut(s) 215
BmgT120I GGNCC 2 cut(s) 488, 1217
BmiI GGNNCC 4 cut(s) 316, 365, 1156, 1218
BmrFI CCNGG 4 cut(s) 151, 452, 611, 1254
BmrI ACTGGG 3 cut(s) 129, 1309, 1477
BmsI GCATC 1 cut(s) 431
BmuI ACTGGG 3 cut(s) 129, 1309, 1477
BpiI GAAGAC 4 cut(s) 104, 676, 952, 1223
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 2 cut(s) 1230, 1364
Bpu10I CCTNAGC 1 cut(s) 307
BpuMI CCSGG 1 cut(s) 611
BsaAI YACGTR 1 cut(s) 172
BsaBI GATNNNNATC 1 cut(s) 1460
BsaHI GRCGYC 3 cut(s) 315, 364, 831
BsaI GGTCTC 2 cut(s) 333, 1118
BsaJI CCNNGG 3 cut(s) 256, 451, 1252
BsaXI ACNNNNNCTCC 2 cut(s) 399, 429
Bsc4I CCNNNNNNNGG 2 cut(s) 324, 1299
Bse1I ACTGG 5 cut(s) 124, 379, 1213, 1304, 1483
Bse3DI GCAATG 1 cut(s) 678
Bse8I GATNNNNATC 1 cut(s) 1460
BseBI CCWGG 3 cut(s) 151, 452, 1254
BseDI CCNNGG 3 cut(s) 256, 451, 1252
BseGI GGATG 1 cut(s) 483
BseJI GATNNNNATC 1 cut(s) 1460
BseLI CCNNNNNNNGG 2 cut(s) 324, 1299
BseMI GCAATG 1 cut(s) 678
BseMII CTCAG 5 cut(s) 420, 507, 725, 1233, 1325
BseNI ACTGG 5 cut(s) 124, 379, 1213, 1304, 1483
BseXI GCAGC 5 cut(s) 655, 749, 778, 1170, 1311
BseYI CCCAGC 3 cut(s) 664, 1057, 1108
BsgI GTGCAG 1 cut(s) 1433
BshNI GGYRCC 2 cut(s) 314, 363
BsiHKAI GWGCWC 1 cut(s) 177
BsiHKCI CYCGRG 1 cut(s) 215
BsiSI CCGG 1 cut(s) 611
BsiWI CGTACG 1 cut(s) 780
BslFI GGGAC 2 cut(s) 136, 647
BslI CCNNNNNNNGG 2 cut(s) 324, 1299
BsmAI GTCTC 3 cut(s) 333, 1118, 1424
BsmFI GGGAC 2 cut(s) 136, 647
BsmI GAATGC 2 cut(s) 1185, 1344
Bso31I GGTCTC 2 cut(s) 333, 1118
BsoBI CYCGRG 1 cut(s) 215
Bsp1286I GDGCHC 1 cut(s) 177
Bsp143I GATC 3 cut(s) 158, 893, 1025
BspACI CCGC 4 cut(s) 138, 312, 1091, 1214
BspCNI CTCAG 5 cut(s) 421, 508, 724, 1234, 1326
BspLI GGNNCC 4 cut(s) 316, 365, 1156, 1218
BspMAI CTGCAG 1 cut(s) 106
BspMI ACCTGC 2 cut(s) 311, 535
BspPI GGATC 2 cut(s) 901, 1033
BspT107I GGYRCC 2 cut(s) 314, 363
BspTNI GGTCTC 2 cut(s) 333, 1118
BsrBI CCGCTC 1 cut(s) 1214
BsrDI GCAATG 1 cut(s) 678
BsrI ACTGG 5 cut(s) 124, 379, 1213, 1304, 1483
BssECI CCNNGG 3 cut(s) 256, 451, 1252
BssMI GATC 3 cut(s) 158, 893, 1025
BssNI GRCGYC 3 cut(s) 315, 364, 831
BssT1I CCWWGG 1 cut(s) 256
Bst2UI CCWGG 3 cut(s) 151, 452, 1254
Bst4CI ACNGT 4 cut(s) 661, 918, 958, 1033
Bst6I CTCTTC 1 cut(s) 1480
BstACI GRCGYC 3 cut(s) 315, 364, 831
BstAPI GCANNNNNTGC 1 cut(s) 677
BstBAI YACGTR 1 cut(s) 172
BstC8I GCNNGC 3 cut(s) 446, 678, 1093
BstDEI CTNAG 8 cut(s) 307, 429, 516, 586, 711, 1021, 1242, 1334
BstF5I GGATG 1 cut(s) 483
BstH2I RGCGCY 3 cut(s) 318, 367, 390
BstHHI GCGC 4 cut(s) 317, 366, 389, 639
BstKTI GATC 3 cut(s) 161, 896, 1028
BstMAI GTCTC 3 cut(s) 333, 1118, 1424
BstMBI GATC 3 cut(s) 158, 893, 1025
BstNI CCWGG 3 cut(s) 151, 452, 1254
BstNSI RCATGY 2 cut(s) 448, 576
BstSCI CCNGG 4 cut(s) 149, 450, 609, 1252
BstSFI CTRYAG 1 cut(s) 102
BstV1I GCAGC 5 cut(s) 655, 749, 778, 1170, 1311
BstV2I GAAGAC 4 cut(s) 104, 676, 952, 1223
BstX2I RGATCY 1 cut(s) 893
BstYI RGATCY 1 cut(s) 893
BtsCI GGATG 1 cut(s) 483
BtsIMutI CAGTG 4 cut(s) 343, 513, 719, 1297
BveI ACCTGC 2 cut(s) 311, 535
Cac8I GCNNGC 3 cut(s) 446, 678, 1093
CaiI CAGNNNCTG 1 cut(s) 989
CfoI GCGC 4 cut(s) 317, 366, 389, 639
Cfr13I GGNCC 2 cut(s) 488, 1217
CseI GACGC 3 cut(s) 24, 839, 876
Csp6I GTAC 4 cut(s) 107, 543, 781, 977
CviAII CATG 4 cut(s) 445, 573, 688, 1096
CviQI GTAC 4 cut(s) 107, 543, 781, 977
DdeI CTNAG 8 cut(s) 307, 429, 516, 586, 711, 1021, 1242, 1334
DinI GGCGCC 2 cut(s) 316, 365
DpnI GATC 3 cut(s) 160, 895, 1027
DpnII GATC 3 cut(s) 158, 893, 1025
DraIII CACNNNGTG 1 cut(s) 1485
Eam1104I CTCTTC 1 cut(s) 1480
EarI CTCTTC 1 cut(s) 1480
Eco130I CCWWGG 1 cut(s) 256
Eco31I GGTCTC 2 cut(s) 333, 1118
Eco32I GATATC 1 cut(s) 654
Eco47I GGWCC 2 cut(s) 488, 1217
Eco47III AGCGCT 1 cut(s) 388
Eco57I CTGAAG 4 cut(s) 303, 762, 768, 966
Eco72I CACGTG 1 cut(s) 172
Eco88I CYCGRG 1 cut(s) 215
EcoO109I RGGNCCY 2 cut(s) 488, 1217
EcoRII CCWGG 3 cut(s) 149, 450, 1252
EcoRV GATATC 1 cut(s) 654
EcoT14I CCWWGG 1 cut(s) 256
EgeI GGCGCC 2 cut(s) 316, 365
EheI GGCGCC 2 cut(s) 316, 365
ErhI CCWWGG 1 cut(s) 256
FaeI CATG 4 cut(s) 448, 576, 691, 1099
FalI AAGNNNNNCTT 2 cut(s) 1059, 1091
FaqI GGGAC 2 cut(s) 136, 647
FatI CATG 4 cut(s) 444, 572, 687, 1095
FauI CCCGC 3 cut(s) 131, 1084, 1207
FauNDI CATATG 3 cut(s) 547, 641, 998
FblI GTMKAC 1 cut(s) 1258
Fnu4HI GCNGC 6 cut(s) 313, 669, 738, 792, 1184, 1325
FokI GGATG 1 cut(s) 490
Fsp4HI GCNGC 6 cut(s) 313, 669, 738, 792, 1184, 1325
FspBI CTAG 1 cut(s) 1352
GlaI GCGC 4 cut(s) 316, 365, 388, 638
GluI GCNGC 6 cut(s) 313, 669, 738, 792, 1184, 1325
GsaI CCCAGC 3 cut(s) 668, 1061, 1112
GsuI CTGGAG 2 cut(s) 1230, 1364
HaeII RGCGCY 3 cut(s) 318, 367, 390
HapII CCGG 1 cut(s) 611
HgaI GACGC 3 cut(s) 24, 839, 876
HhaI GCGC 4 cut(s) 317, 366, 389, 639
Hin1I GRCGYC 3 cut(s) 315, 364, 831
Hin1II CATG 4 cut(s) 448, 576, 691, 1099
Hin6I GCGC 4 cut(s) 315, 364, 387, 637
HinP1I GCGC 4 cut(s) 315, 364, 387, 637
HincII GTYRAC 1 cut(s) 1259
HindII GTYRAC 1 cut(s) 1259
HinfI GANTC 6 cut(s) 5, 142, 433, 582, 606, 836
HpaII CCGG 1 cut(s) 611
HphI GGTGA 1 cut(s) 516
Hpy166II GTNNAC 3 cut(s) 977, 1259, 1297
Hpy188I TCNGA 6 cut(s) 189, 470, 817, 853, 1243, 1335
Hpy188III TCNNGA 2 cut(s) 236, 964
Hpy8I GTNNAC 3 cut(s) 977, 1259, 1297
Hpy99I CGWCG 1 cut(s) 18
HpyAV CCTTC 8 cut(s) 72, 156, 278, 450, 501, 726, 990, 1152
HpyCH4III ACNGT 4 cut(s) 661, 918, 958, 1033
HpyCH4IV ACGT 4 cut(s) 109, 171, 783, 1422
HpyCH4V TGCA 8 cut(s) 104, 422, 671, 992, 1014, 1205, 1373, 1414
HpyF3I CTNAG 8 cut(s) 307, 429, 516, 586, 711, 1021, 1242, 1334
HpySE526I ACGT 4 cut(s) 109, 171, 783, 1422
Hsp92I GRCGYC 3 cut(s) 315, 364, 831
Hsp92II CATG 4 cut(s) 448, 576, 691, 1099
HspAI GCGC 4 cut(s) 315, 364, 387, 637
KasI GGCGCC 2 cut(s) 314, 363
Kzo9I GATC 3 cut(s) 158, 893, 1025
LmnI GCTCC 4 cut(s) 407, 453, 1211, 1345
Lsp1109I GCAGC 5 cut(s) 655, 749, 778, 1170, 1311
LweI GCATC 1 cut(s) 431
MaeI CTAG 1 cut(s) 1352
MaeII ACGT 4 cut(s) 109, 171, 783, 1422
MaeIII GTNAC 4 cut(s) 41, 496, 511, 522
MalI GATC 3 cut(s) 160, 895, 1027
MbiI CCGCTC 1 cut(s) 1214
MboI GATC 3 cut(s) 158, 893, 1025
MboII GAAGA 7 cut(s) 104, 676, 952, 1223, 1378, 1429, 1467
MfeI CAATTG 1 cut(s) 249
MflI RGATCY 1 cut(s) 893
MhlI GDGCHC 1 cut(s) 177
MluCI AATT 3 cut(s) 249, 471, 845
Mly113I GGCGCC 2 cut(s) 315, 364
MlyI GAGTC 2 cut(s) 442, 576
MmeI TCCRAC 5 cut(s) 385, 448, 795, 831, 1153
MseI TTAA 2 cut(s) 225, 723
MslI CAYNNNNRTG 3 cut(s) 29, 518, 1409
MspA1I CMGCKG 2 cut(s) 668, 740
MspI CCGG 1 cut(s) 611
MspR9I CCNGG 4 cut(s) 151, 452, 611, 1254
MunI CAATTG 1 cut(s) 249
Mva1269I GAATGC 2 cut(s) 1185, 1344
MvaI CCWGG 3 cut(s) 151, 452, 1254
NarI GGCGCC 2 cut(s) 315, 364
NciI CCSGG 1 cut(s) 611
NdeI CATATG 3 cut(s) 547, 641, 998
NdeII GATC 3 cut(s) 158, 893, 1025
NlaIII CATG 4 cut(s) 448, 576, 691, 1099
NlaIV GGNNCC 4 cut(s) 316, 365, 1156, 1218
NmuCI GTSAC 3 cut(s) 41, 511, 522
NspI RCATGY 2 cut(s) 448, 576
OliI CACNNNNGTG 1 cut(s) 518
PaeI GCATGC 1 cut(s) 448
PaqCI CACCTGC 2 cut(s) 311, 535
PciI ACATGT 1 cut(s) 572
PctI GAATGC 2 cut(s) 1185, 1344
PfeI GAWTC 4 cut(s) 5, 142, 606, 836
Pfl23II CGTACG 1 cut(s) 780
PfoI TCCNGGA 1 cut(s) 149
PkrI GCNGC 6 cut(s) 314, 670, 739, 793, 1185, 1326
PleI GAGTC 2 cut(s) 441, 576
PluTI GGCGCC 2 cut(s) 318, 367
PmaCI CACGTG 1 cut(s) 172
PmlI CACGTG 1 cut(s) 172
PpsI GAGTC 2 cut(s) 441, 576
Ppu21I YACGTR 1 cut(s) 172
PpuMI RGGWCCY 2 cut(s) 488, 1217
PscI ACATGT 1 cut(s) 572
PsiI TTATAA 1 cut(s) 1307
Psp5II RGGWCCY 2 cut(s) 488, 1217
Psp6I CCWGG 3 cut(s) 149, 450, 1252
PspCI CACGTG 1 cut(s) 172
PspFI CCCAGC 3 cut(s) 664, 1057, 1108
PspGI CCWGG 3 cut(s) 149, 450, 1252
PspLI CGTACG 1 cut(s) 780
PspN4I GGNNCC 4 cut(s) 316, 365, 1156, 1218
PspPI GGNCC 2 cut(s) 488, 1217
PspPPI RGGWCCY 2 cut(s) 488, 1217
PstI CTGCAG 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 989
PsuI RGATCY 1 cut(s) 893
PvuII CAGCTG 2 cut(s) 668, 740
RsaI GTAC 4 cut(s) 108, 544, 782, 978
RsaNI GTAC 4 cut(s) 107, 543, 781, 977
RseI CAYNNNNRTG 3 cut(s) 29, 518, 1409
SalI GTCGAC 1 cut(s) 1257
SaqAI TTAA 2 cut(s) 225, 723
SatI GCNGC 6 cut(s) 313, 669, 738, 792, 1184, 1325
Sau3AI GATC 3 cut(s) 158, 893, 1025
Sau96I GGNCC 2 cut(s) 488, 1217
SchI GAGTC 2 cut(s) 442, 576
ScrFI CCNGG 4 cut(s) 151, 452, 611, 1254
SduI GDGCHC 1 cut(s) 177
SfaNI GCATC 1 cut(s) 431
SfcI CTRYAG 1 cut(s) 102
SfoI GGCGCC 2 cut(s) 316, 365
SinI GGWCC 2 cut(s) 488, 1217
SmiMI CAYNNNNRTG 3 cut(s) 29, 518, 1409
SphI GCATGC 1 cut(s) 448
Sse9I AATT 3 cut(s) 249, 471, 845
SsiI CCGC 4 cut(s) 138, 312, 1091, 1214
SspDI GGCGCC 2 cut(s) 314, 363
SspI AATATT 1 cut(s) 1377
SspMI CTAG 1 cut(s) 1352
StyD4I CCNGG 4 cut(s) 149, 450, 609, 1252
StyI CCWWGG 1 cut(s) 256
TaaI ACNGT 4 cut(s) 661, 918, 958, 1033
TaiI ACGT 4 cut(s) 112, 174, 786, 1425
TaqI TCGA 4 cut(s) 13, 237, 1258, 1264
TasI AATT 3 cut(s) 249, 471, 845
TauI GCSGC 1 cut(s) 315
TfiI GAWTC 4 cut(s) 5, 142, 606, 836
Tru1I TTAA 2 cut(s) 225, 723
Tru9I TTAA 2 cut(s) 225, 723
TscAI CASTG 4 cut(s) 343, 520, 719, 1304
TseFI GTSAC 3 cut(s) 41, 511, 522
TseI GCWGC 5 cut(s) 668, 737, 791, 1183, 1324
Tsp45I GTSAC 3 cut(s) 41, 511, 522
TspDTI ATGAA 3 cut(s) 243, 676, 877
TspRI CASTG 4 cut(s) 343, 520, 719, 1304
VpaK11BI GGWCC 2 cut(s) 488, 1217
XceI RCATGY 2 cut(s) 448, 576
XmiI GTMKAC 1 cut(s) 1258
XspI CTAG 1 cut(s) 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.