MD17G1190600.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
22711959 .. 22719513
7555 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1190600.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGCGGGGTCGTCATCTTGATGCCTACTCGGCATACAAGCGTGTGGCGTCCAAGGACCCTATCAATGCTTATGATAGAGAAGAAAGTGCAGTAGGTTTAGTGAATGGAAAGGGTATTGGAAACCCTTCATGGAAGCGCTCCTTGCCGCATATGCTTGTTGCAGCTCTTTCTTCGTTCCTATATGGCTACCATCTTGGGGTGGTTAACGAGACACTAGATAGCATTTCTTTGGACCTTGGCTTCAGTGGGAATCCTTTGGCGAAGGGTCTAGTAGTGAGTACCTGTTTAGGTGGTGCTTTTGTTGGATCTATATTTAGTGGTTGGATTCTAGATGGAGTTGGGCATCGAAGAGCATTCCAGATGTGTGCATTGCCGATGATAATCGGTGCATCAATGAGTGCAACAACCAAAAGTCTATGGGGCATGCTTCTAGGGAGGATATTTGTTGGTACTGGGATGGGAATTGGCCCACCTGTTGCTGCTATCTATGTGTCAGAGATTTCACCAGCTTTTGTACGGGGTACTTTTGGGAGCTTCACACAAATTTCTACATGTCTTGGACTTATGGGGTCTCTCTTTATTGGACTCCCGGCCAAGGATGTAGTGGGTTGGTGGCGGGTTTGTTTTTGGGTATCTACTGTTCCTGCTGCAGTGTTAGCTGTTTGCATGGAGTTCTGTGCAGAGAGTCCTCAGTGGCTTTTCAAGAGAGGACGAGGTACTGAAGCTGAAGTTGAATTTGAGAAACTTTTAGGAGCAGCACATGTTAAATTTGCAATGGCAGAATTGTCAAAGTCTGACAGAGGGGATGAACTAGAGACAGTAAAGTTCTCTGAGCTACTGTATGGCCGACATTTCAAAATGGTTTTCATTGGGTCTACCATTTTTGCTTTACAACAGCTGACAGGCATAAATGCTGTGTTCTATTTCTCTTCAACTGTTTTTAAAAGCTTTGGGGTGCCTTCAGCTCTGGCTAACGTATGTGTTGGAATCGCAAATCTATCGGGGTCAATTCTTGCAATGATATTGATGGATAAGCTTGGAAGAAAGGTGCTTCTTCTTGGAAGTTTTTCTGGCATGGCAGTGGCAATGGGTCTTCAAGTAACTGGAGCAAGTTCTTATACATCAGGGTCTGGAGCATTGAGTCTATCTGTTGGCGGCATGCTGCTGTTTGTGTTCATGTTTGCTACTGGTGCTGGTCCAGTGCCTGGTCTCCTCCTATCAGAAATTCTTCCTGGCCGTATTAGGGCAAAAGCAATGGCAGTTTGCATGGCCGTGCATTGGGTGATAAATTTCTTTGTTGGCCTGTTGTTTTTACCGTTGCTGGAGCAAATCGGGCCACAAATTCTGTATACAATCTTTGCTACATTTTGTCTACTGGCCGTTCTTTTTGTGAAGAGAAACGTAATAGAAACAAAAGGAAAGTCCCTCCAAGAAATTGAAATTGCACTTGGAGATAGTGAACAATAA

Protein Analysis

489

Amino Acids

52.14

Weight (kDa)

8.88

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 51 - 481 1.9e-89 Sugar (and other) transporter
MFS_1 PF07690 55 - 396 1.4e-19 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 955
AccB7I CCANNNNNTGG 1 cut(s) 1205
AccI GTMKAC 3 cut(s) 875, 1349, 1372
AciI CCGC 4 cut(s) 4, 146, 616, 1155
AclWI GGATC 1 cut(s) 313
AcoI YGGCCR 5 cut(s) 591, 844, 1234, 1269, 1377
AcsI RAATTY 6 cut(s) 543, 734, 767, 1224, 1288, 1341
AcuI CTGAAG 4 cut(s) 226, 741, 747, 945
AcyI GRCGYC 1 cut(s) 47
AfaI GTAC 5 cut(s) 280, 451, 516, 523, 718
AfeI AGCGCT 1 cut(s) 137
AfiI CCNNNNNNNGG 5 cut(s) 196, 595, 1205, 1243, 1278
AflIII ACRYGT 2 cut(s) 551, 760
AgsI TTSAA 6 cut(s) 703, 734, 856, 933, 1097, 1439
AjnI CCWGG 2 cut(s) 1204, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 1431, 1463
Alw26I GTCTC 4 cut(s) 203, 576, 809, 1214
AlwI GGATC 1 cut(s) 313
AlwNI CAGNNNCTG 2 cut(s) 1130, 1205
Aor51HI AGCGCT 1 cut(s) 137
AoxI GGCC 8 cut(s) 466, 591, 844, 1234, 1269, 1300, 1334, 1377
ApeKI GCWGC 5 cut(s) 161, 479, 647, 755, 1162
ApoI RAATTY 6 cut(s) 543, 734, 767, 1224, 1288, 1341
ArsI GACNNNNNNTTYG 2 cut(s) 1406, 1438
Asp700I GAANNNNTTC 3 cut(s) 124, 1066, 1227
AspLEI GCGC 1 cut(s) 138
AspS9I GGNCC 5 cut(s) 55, 232, 467, 1196, 1334
AsuC2I CCSGG 1 cut(s) 590
AsuHPI GGTGA 2 cut(s) 495, 1294
AvaII GGWCC 3 cut(s) 55, 232, 1196
BanI GGYRCC 1 cut(s) 955
BbsI GAAGAC 1 cut(s) 1085
BbvI GCAGC 5 cut(s) 173, 466, 634, 767, 1149
BccI CCATC 4 cut(s) 198, 326, 451, 1021
BceAI ACGGC 3 cut(s) 1221, 1256, 1364
BcgI CGANNNNNNTGC 2 cut(s) 981, 1015
BciT130I CCWGG 2 cut(s) 1206, 1233
BcnI CCSGG 1 cut(s) 590
BcoDI GTCTC 4 cut(s) 203, 576, 809, 1214
BfaI CTAG 5 cut(s) 215, 269, 329, 431, 812
BfmI CTRYAG 1 cut(s) 648
BfoI RGCGCY 1 cut(s) 139
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 7 cut(s) 146, 162, 480, 648, 756, 1156, 1163
BlsI GCNGC 7 cut(s) 147, 163, 481, 649, 757, 1157, 1164
Bme1390I CCNGG 3 cut(s) 590, 1206, 1233
Bme18I GGWCC 3 cut(s) 55, 232, 1196
BmgT120I GGNCC 5 cut(s) 55, 232, 467, 1196, 1334
BmiI GGNNCC 2 cut(s) 57, 957
BmrFI CCNGG 3 cut(s) 590, 1206, 1233
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 3 cut(s) 10, 352, 398
BmuI ACTGGG 1 cut(s) 462
BpiI GAAGAC 1 cut(s) 1085
BpmI CTGGAG 3 cut(s) 1125, 1152, 1343
BpuMI CCSGG 1 cut(s) 590
BsaBI GATNNNNATC 1 cut(s) 380
BsaHI GRCGYC 1 cut(s) 47
BsaI GGTCTC 2 cut(s) 576, 1214
BsaJI CCNNGG 3 cut(s) 51, 235, 594
Bsc4I CCNNNNNNNGG 5 cut(s) 196, 595, 1205, 1243, 1278
Bse1I ACTGG 5 cut(s) 457, 1108, 1192, 1199, 1380
Bse3DI GCAATG 5 cut(s) 368, 780, 1023, 1092, 1260
Bse8I GATNNNNATC 1 cut(s) 380
BseBI CCWGG 2 cut(s) 1206, 1233
BseDI CCNNGG 3 cut(s) 51, 235, 594
BseGI GGATG 3 cut(s) 462, 604, 811
BseJI GATNNNNATC 1 cut(s) 380
BseLI CCNNNNNNNGG 5 cut(s) 196, 595, 1205, 1243, 1278
BseMI GCAATG 5 cut(s) 368, 780, 1023, 1092, 1260
BseMII CTCAG 2 cut(s) 704, 822
BseNI ACTGG 5 cut(s) 457, 1108, 1192, 1199, 1380
BseRI GAGGAG 1 cut(s) 1202
BseXI GCAGC 5 cut(s) 173, 466, 634, 767, 1149
BsgI GTGCAG 2 cut(s) 108, 699
BshFI GGCC 8 cut(s) 468, 593, 846, 1236, 1271, 1302, 1336, 1379
BshNI GGYRCC 1 cut(s) 955
BsiSI CCGG 1 cut(s) 590
BslFI GGGAC 1 cut(s) 1408
BslI CCNNNNNNNGG 5 cut(s) 196, 595, 1205, 1243, 1278
BsmAI GTCTC 4 cut(s) 203, 576, 809, 1214
BsmFI GGGAC 1 cut(s) 1408
BsmI GAATGC 1 cut(s) 353
BsnI GGCC 8 cut(s) 468, 593, 846, 1236, 1271, 1302, 1336, 1379
Bso31I GGTCTC 2 cut(s) 576, 1214
Bsp143I GATC 1 cut(s) 305
BspACI CCGC 4 cut(s) 4, 146, 616, 1155
BspANI GGCC 8 cut(s) 468, 593, 846, 1236, 1271, 1302, 1336, 1379
BspCNI CTCAG 2 cut(s) 703, 823
BspLI GGNNCC 2 cut(s) 57, 957
BspMAI CTGCAG 1 cut(s) 652
BspPI GGATC 1 cut(s) 313
BspQI GCTCTTC 1 cut(s) 343
BspT107I GGYRCC 1 cut(s) 955
BspTNI GGTCTC 2 cut(s) 576, 1214
BsrDI GCAATG 5 cut(s) 368, 780, 1023, 1092, 1260
BsrI ACTGG 5 cut(s) 457, 1108, 1192, 1199, 1380
BssECI CCNNGG 3 cut(s) 51, 235, 594
BssMI GATC 1 cut(s) 305
BssNAI GTATAC 1 cut(s) 1350
BssNI GRCGYC 1 cut(s) 47
BssT1I CCWWGG 3 cut(s) 51, 235, 594
Bst1107I GTATAC 1 cut(s) 1350
Bst2UI CCWGG 2 cut(s) 1206, 1233
Bst4CI ACNGT 5 cut(s) 640, 820, 840, 937, 1317
Bst6I CTCTTC 3 cut(s) 343, 934, 1388
BstACI GRCGYC 1 cut(s) 47
BstC8I GCNNGC 2 cut(s) 425, 1160
BstDEI CTNAG 2 cut(s) 690, 831
BstF5I GGATG 3 cut(s) 462, 604, 811
BstH2I RGCGCY 1 cut(s) 139
BstHHI GCGC 1 cut(s) 138
BstKTI GATC 1 cut(s) 308
BstMAI GTCTC 4 cut(s) 203, 576, 809, 1214
BstMBI GATC 1 cut(s) 305
BstMWI GCNNNNNNNGC 6 cut(s) 29, 142, 151, 656, 1190, 1333
BstNI CCWGG 2 cut(s) 1206, 1233
BstNSI RCATGY 4 cut(s) 427, 555, 764, 1162
BstSCI CCNGG 3 cut(s) 588, 1204, 1231
BstSFI CTRYAG 1 cut(s) 648
BstV1I GCAGC 5 cut(s) 173, 466, 634, 767, 1149
BstV2I GAAGAC 1 cut(s) 1085
BstX2I RGATCY 1 cut(s) 305
BstYI RGATCY 1 cut(s) 305
BstZ17I GTATAC 1 cut(s) 1350
BsuRI GGCC 8 cut(s) 468, 593, 846, 1236, 1271, 1302, 1336, 1379
BtsCI GGATG 3 cut(s) 462, 604, 811
BtsI GCAGTG 2 cut(s) 657, 1086
BtsIMutI CAGTG 5 cut(s) 250, 657, 698, 1086, 1206
Cac8I GCNNGC 2 cut(s) 425, 1160
CaiI CAGNNNCTG 2 cut(s) 1130, 1205
CfoI GCGC 1 cut(s) 138
Cfr13I GGNCC 5 cut(s) 55, 232, 467, 1196, 1334
CseI GACGC 1 cut(s) 36
Csp6I GTAC 5 cut(s) 279, 450, 515, 522, 717
CviAII CATG 9 cut(s) 129, 424, 552, 667, 761, 1075, 1159, 1177, 1267
CviQI GTAC 5 cut(s) 279, 450, 515, 522, 717
DdeI CTNAG 2 cut(s) 690, 831
DpnI GATC 1 cut(s) 307
DpnII GATC 1 cut(s) 305
DraI TTTAAA 1 cut(s) 943
EaeI YGGCCR 5 cut(s) 591, 844, 1234, 1269, 1377
Eam1104I CTCTTC 3 cut(s) 343, 934, 1388
EarI CTCTTC 3 cut(s) 343, 934, 1388
Eco130I CCWWGG 3 cut(s) 51, 235, 594
Eco31I GGTCTC 2 cut(s) 576, 1214
Eco47I GGWCC 3 cut(s) 55, 232, 1196
Eco47III AGCGCT 1 cut(s) 137
Eco57I CTGAAG 4 cut(s) 226, 741, 747, 945
EcoO109I RGGNCCY 1 cut(s) 55
EcoRII CCWGG 2 cut(s) 1204, 1231
EcoT14I CCWWGG 3 cut(s) 51, 235, 594
ErhI CCWWGG 3 cut(s) 51, 235, 594
FaeI CATG 9 cut(s) 132, 427, 555, 670, 764, 1078, 1162, 1180, 1270
FalI AAGNNNNNCTT 2 cut(s) 125, 157
FaqI GGGAC 1 cut(s) 1408
FatI CATG 9 cut(s) 128, 423, 551, 666, 760, 1074, 1158, 1176, 1266
FauI CCCGC 1 cut(s) 609
FauNDI CATATG 1 cut(s) 150
FblI GTMKAC 3 cut(s) 875, 1349, 1372
Fnu4HI GCNGC 7 cut(s) 146, 162, 480, 648, 756, 1156, 1163
FokI GGATG 3 cut(s) 469, 611, 818
Fsp4HI GCNGC 7 cut(s) 146, 162, 480, 648, 756, 1156, 1163
FspBI CTAG 5 cut(s) 215, 269, 329, 431, 812
GlaI GCGC 1 cut(s) 137
GluI GCNGC 7 cut(s) 146, 162, 480, 648, 756, 1156, 1163
GsuI CTGGAG 3 cut(s) 1125, 1152, 1343
HaeII RGCGCY 1 cut(s) 139
HaeIII GGCC 8 cut(s) 468, 593, 846, 1236, 1271, 1302, 1336, 1379
HapII CCGG 1 cut(s) 590
HgaI GACGC 1 cut(s) 36
HhaI GCGC 1 cut(s) 138
Hin1I GRCGYC 1 cut(s) 47
Hin1II CATG 9 cut(s) 132, 427, 555, 670, 764, 1078, 1162, 1180, 1270
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HindIII AAGCTT 2 cut(s) 946, 1034
HinfI GANTC 6 cut(s) 250, 325, 585, 685, 987, 1141
HpaI GTTAAC 1 cut(s) 205
HpaII CCGG 1 cut(s) 590
HphI GGTGA 2 cut(s) 495, 1294
Hpy166II GTNNAC 5 cut(s) 205, 876, 1350, 1373, 1460
Hpy188I TCNGA 4 cut(s) 496, 796, 832, 1222
Hpy188III TCNNGA 5 cut(s) 17, 329, 358, 703, 1131
Hpy8I GTNNAC 5 cut(s) 205, 876, 1350, 1373, 1460
HpyAV CCTTC 3 cut(s) 135, 256, 969
HpyCH4III ACNGT 5 cut(s) 640, 820, 840, 937, 1317
HpyCH4IV ACGT 2 cut(s) 975, 1401
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 142, 151, 656, 1190, 1333
HpyF3I CTNAG 2 cut(s) 690, 831
HpySE526I ACGT 2 cut(s) 975, 1401
Hsp92I GRCGYC 1 cut(s) 47
Hsp92II CATG 9 cut(s) 132, 427, 555, 670, 764, 1078, 1162, 1180, 1270
HspAI GCGC 1 cut(s) 136
KspAI GTTAAC 1 cut(s) 205
Kzo9I GATC 1 cut(s) 305
LguI GCTCTTC 1 cut(s) 343
LmnI GCTCC 6 cut(s) 143, 531, 752, 1106, 1133, 1324
Lsp1109I GCAGC 5 cut(s) 173, 466, 634, 767, 1149
LweI GCATC 3 cut(s) 10, 352, 398
MaeI CTAG 5 cut(s) 215, 269, 329, 431, 812
MaeII ACGT 2 cut(s) 975, 1401
MaeIII GTNAC 1 cut(s) 1099
MalI GATC 1 cut(s) 307
MboI GATC 1 cut(s) 305
MboII GAAGA 9 cut(s) 92, 162, 360, 921, 1046, 1053, 1085, 1220, 1405
MflI RGATCY 1 cut(s) 305
MlyI GAGTC 3 cut(s) 579, 694, 1150
MmeI TCCRAC 3 cut(s) 283, 302, 964
MnlI CCTC 7 cut(s) 429, 699, 701, 707, 794, 1223, 1436
MroXI GAANNNNTTC 3 cut(s) 124, 1066, 1227
MseI TTAA 3 cut(s) 204, 765, 942
MslI CAYNNNNRTG 3 cut(s) 18, 1079, 1271
MspA1I CMGCKG 1 cut(s) 898
MspI CCGG 1 cut(s) 590
MspR9I CCNGG 3 cut(s) 590, 1206, 1233
Mva1269I GAATGC 1 cut(s) 353
MvaI CCWGG 2 cut(s) 1206, 1233
MwoI GCNNNNNNNGC 6 cut(s) 29, 142, 151, 656, 1190, 1333
NciI CCSGG 1 cut(s) 590
NdeI CATATG 1 cut(s) 150
NdeII GATC 1 cut(s) 305
NlaIII CATG 9 cut(s) 132, 427, 555, 670, 764, 1078, 1162, 1180, 1270
NlaIV GGNNCC 2 cut(s) 57, 957
NmeAIII GCCGAG 1 cut(s) 8
NspI RCATGY 4 cut(s) 427, 555, 764, 1162
PaeI GCATGC 2 cut(s) 427, 1162
PciI ACATGT 2 cut(s) 551, 760
PciSI GCTCTTC 1 cut(s) 343
PctI GAATGC 1 cut(s) 353
PdmI GAANNNNTTC 3 cut(s) 124, 1066, 1227
PfeI GAWTC 3 cut(s) 250, 325, 987
PflMI CCANNNNNTGG 1 cut(s) 1205
PkrI GCNGC 7 cut(s) 147, 163, 481, 649, 757, 1157, 1164
PleI GAGTC 3 cut(s) 579, 693, 1149
PpsI GAGTC 3 cut(s) 579, 693, 1149
PpuMI RGGWCCY 1 cut(s) 55
PscI ACATGT 2 cut(s) 551, 760
Psp5II RGGWCCY 1 cut(s) 55
Psp6I CCWGG 2 cut(s) 1204, 1231
PspGI CCWGG 2 cut(s) 1204, 1231
PspN4I GGNNCC 2 cut(s) 57, 957
PspPI GGNCC 5 cut(s) 55, 232, 467, 1196, 1334
PspPPI RGGWCCY 1 cut(s) 55
PsrI GAACNNNNNNTAC 2 cut(s) 624, 656
PstI CTGCAG 1 cut(s) 652
PstNI CAGNNNCTG 2 cut(s) 1130, 1205
PsuI RGATCY 1 cut(s) 305
PvuII CAGCTG 1 cut(s) 898
RsaI GTAC 5 cut(s) 280, 451, 516, 523, 718
RsaNI GTAC 5 cut(s) 279, 450, 515, 522, 717
RseI CAYNNNNRTG 3 cut(s) 18, 1079, 1271
SapI GCTCTTC 1 cut(s) 343
SaqAI TTAA 3 cut(s) 204, 765, 942
SatI GCNGC 7 cut(s) 146, 162, 480, 648, 756, 1156, 1163
Sau3AI GATC 1 cut(s) 305
Sau96I GGNCC 5 cut(s) 55, 232, 467, 1196, 1334
SchI GAGTC 3 cut(s) 579, 694, 1150
ScrFI CCNGG 3 cut(s) 590, 1206, 1233
SfaNI GCATC 3 cut(s) 10, 352, 398
SfcI CTRYAG 1 cut(s) 648
SinI GGWCC 3 cut(s) 55, 232, 1196
SmiMI CAYNNNNRTG 3 cut(s) 18, 1079, 1271
SphI GCATGC 2 cut(s) 427, 1162
SsiI CCGC 4 cut(s) 4, 146, 616, 1155
SspMI CTAG 5 cut(s) 215, 269, 329, 431, 812
StyD4I CCNGG 3 cut(s) 588, 1204, 1231
StyI CCWWGG 3 cut(s) 51, 235, 594
TaaI ACNGT 5 cut(s) 640, 820, 840, 937, 1317
TaiI ACGT 2 cut(s) 978, 1404
TaqI TCGA 1 cut(s) 346
TauI GCSGC 2 cut(s) 148, 1158
TfiI GAWTC 3 cut(s) 250, 325, 987
Tru1I TTAA 3 cut(s) 204, 765, 942
Tru9I TTAA 3 cut(s) 204, 765, 942
TscAI CASTG 5 cut(s) 250, 657, 698, 1086, 1206
TseI GCWGC 5 cut(s) 161, 479, 647, 755, 1162
TspDTI ATGAA 4 cut(s) 117, 822, 856, 1165
TspRI CASTG 5 cut(s) 250, 657, 698, 1086, 1206
Van91I CCANNNNNTGG 1 cut(s) 1205
VpaK11BI GGWCC 3 cut(s) 55, 232, 1196
XapI RAATTY 6 cut(s) 543, 734, 767, 1224, 1288, 1341
XbaI TCTAGA 1 cut(s) 328
XceI RCATGY 4 cut(s) 427, 555, 764, 1162
XcmI CCANNNNNNNNNTGG 1 cut(s) 601
XmiI GTMKAC 3 cut(s) 875, 1349, 1372
XmnI GAANNNNTTC 3 cut(s) 124, 1066, 1227
XspI CTAG 5 cut(s) 215, 269, 329, 431, 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.