AT1G79915

Lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011335
Physical Location & Seq
Forward (+)
30057206 .. 30058657
1452 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G79915.2

Sequence Viewer

Length: 939 bp
ATGGAGGAGGATTCAGAGATTGAGGTGATGAGCGAGATTCACCTTGGTTGCCCTCCCGCCGCCACTGACGATCCCTTTCTTTCCCGTTTCACCTTCTCTTTTCCCTCCAATACTGTTAGTGTAGATAAAGATGGCGATCTTCTTCTTCCTAGACGCAATTACCCTACAGGCCCATCGTTTACTGTCACTATTCAGCATTCTATCACATCAAATCTCCGTCATGTTGGTCTGCAGGTGTGGAAAGCTCAACTGGTCTTATCAGAATTTGTGCTGCATAAGATTTGCACCTCATCTGATTTCCATGGCATTGTGTGTCTGGAACTCGGTGCTGGAACAGGGCTACTCGGTATTTTGCTTGCACGGGTCGCCAAGGCTATTTTCCTTACTGATCATGGAGACGAGATCCTTGGCAACTGTGGTAAGAACCTGGAATTGAATTCATCCTTGTTTCACCCCCACACTGTGGTAAATGTTCGTGAGCTCAACTGGATGAGCGATTGGCCTATTCAAGACACCCATGCTCTGTCTCCTTTGTTTATGTCAAGCTACTGTTGGAACAAGCAGGACTTTGAACTAGTCAAATGTTCAAGCTTCATTTTCGCGGCAGATGTGATCTACAGCGATGATCTAACAATTGCGTTATTTAGCATGCTAAGGAGAGTAATGTCATTCGGTTGTGACAAGGTGCTATATTTGGGATTGGAGAAACGATACAACTTCAGCCTTGATGATCTCAACGTTGTTGCCAATGGCTACACCTGCTTTAGAAGCTACGTCAAAGAAGATGGAATAGGTAAGCAAGAGAAGAGGAGTTTTGTGGGGAAGCGCATCGACGTCACACAAATCCCCCACTACTTGAAGGATTACGACAGAGGAGAAGATGTTGAGCTATGGGAGATCAAATATGTACTTCGATTAAAATCCCAATGTCTGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

312

Amino Acids

35.38

Weight (kDa)

5.46

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 72 - 238 1.2e-16 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011335)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79915 AT1G79915
fragaria_vesca FvH4_6g31280 FvH4_6g31280 FvH4_6g31280
malus_domestica MD17G1194300.v1.1
prunus_persica Prupe.3G070300_v2.0.a1
pyrus_communis pycom17g20010
rosa_chinensis RchiOBHm_Chr2g0138011
rosa_laevigata RLG00000019712
rosa_roxburghii Rroxscaffold_2G00106580
rosa_rugosa Rorug02G0348800 Rorug02G0348900 Rorug02G0349000 Rorug02G0349100
rosa_samantha Rh2AG395700 Rh2BG411000 Rh2CG382200 Rh2DG417500
rosa_wichuraiana Rw2G032310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 223, 767
AatII GACGTC 1 cut(s) 837
Acc36I ACCTGC 2 cut(s) 223, 767
AccB7I CCANNNNNTGG 1 cut(s) 463
AccII CGCG 1 cut(s) 602
AciI CCGC 3 cut(s) 57, 60, 602
AclI AACGTT 1 cut(s) 738
AclWI GGATC 2 cut(s) 65, 397
AcsI RAATTY 2 cut(s) 263, 436
AcuI CTGAAG 1 cut(s) 703
AcyI GRCGYC 1 cut(s) 834
AdeI CACNNNGTG 1 cut(s) 463
AfaI GTAC 1 cut(s) 909
AfiI CCNNNNNNNGG 1 cut(s) 463
AgsI TTSAA 5 cut(s) 436, 509, 572, 588, 859
AhlI ACTAGT 1 cut(s) 574
AjnI CCWGG 1 cut(s) 426
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AluBI AGCT 6 cut(s) 245, 481, 546, 591, 771, 889
AluI AGCT 6 cut(s) 245, 481, 546, 591, 771, 889
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 2 cut(s) 390, 531
AlwI GGATC 2 cut(s) 65, 397
AoxI GGCC 2 cut(s) 169, 500
ApeKI GCWGC 1 cut(s) 271
ApoI RAATTY 2 cut(s) 263, 436
AspLEI GCGC 1 cut(s) 828
AspS9I GGNCC 1 cut(s) 170
AsuHPI GGTGA 4 cut(s) 32, 37, 82, 443
BanII GRGCYC 1 cut(s) 483
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 1 cut(s) 258
BccI CCATC 3 cut(s) 125, 181, 779
BciT130I CCWGG 1 cut(s) 428
BclI TGATCA 1 cut(s) 388
BcoDI GTCTC 2 cut(s) 390, 531
BcuI ACTAGT 1 cut(s) 574
BfaI CTAG 2 cut(s) 150, 575
BfmI CTRYAG 3 cut(s) 165, 230, 616
BfuAI ACCTGC 2 cut(s) 223, 767
BisI GCNGC 3 cut(s) 60, 272, 603
BlsI GCNGC 3 cut(s) 61, 273, 604
Bme1390I CCNGG 1 cut(s) 428
BmgT120I GGNCC 1 cut(s) 170
BmrFI CCNGG 1 cut(s) 428
BmsI GCATC 1 cut(s) 837
Bpu10I CCTNAGC 1 cut(s) 653
BsaBI GATNNNNATC 2 cut(s) 135, 919
BsaHI GRCGYC 1 cut(s) 834
BsaJI CCNNGG 4 cut(s) 43, 301, 369, 406
BsaXI ACNNNNNCTCC 2 cut(s) 867, 897
Bsc4I CCNNNNNNNGG 1 cut(s) 463
Bse1I ACTGG 2 cut(s) 255, 491
Bse8I GATNNNNATC 2 cut(s) 135, 919
BseBI CCWGG 1 cut(s) 428
BseDI CCNNGG 4 cut(s) 43, 301, 369, 406
BseGI GGATG 2 cut(s) 440, 495
BseJI GATNNNNATC 2 cut(s) 135, 919
BseLI CCNNNNNNNGG 1 cut(s) 463
BseNI ACTGG 2 cut(s) 255, 491
BseRI GAGGAG 3 cut(s) 20, 823, 888
BseXI GCAGC 1 cut(s) 258
Bsh1236I CGCG 1 cut(s) 602
BshFI GGCC 2 cut(s) 171, 502
BsiHKAI GWGCWC 1 cut(s) 483
BslI CCNNNNNNNGG 1 cut(s) 463
BsmAI GTCTC 2 cut(s) 390, 531
BsmBI CGTCTC 1 cut(s) 390
BsmI GAATGC 1 cut(s) 196
BsnI GGCC 2 cut(s) 171, 502
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 3 cut(s) 57, 60, 602
BspANI GGCC 2 cut(s) 171, 502
BspFNI CGCG 1 cut(s) 602
BspMAI CTGCAG 1 cut(s) 234
BspMI ACCTGC 2 cut(s) 223, 767
BspPI GGATC 2 cut(s) 65, 397
BsrI ACTGG 2 cut(s) 255, 491
BssECI CCNNGG 4 cut(s) 43, 301, 369, 406
BssMI GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
BssNI GRCGYC 1 cut(s) 834
BssT1I CCWWGG 4 cut(s) 43, 301, 369, 406
Bst2UI CCWGG 1 cut(s) 428
Bst4CI ACNGT 5 cut(s) 115, 184, 416, 463, 551
Bst6I CTCTTC 1 cut(s) 800
BstACI GRCGYC 1 cut(s) 834
BstC8I GCNNGC 2 cut(s) 357, 650
BstDEI CTNAG 1 cut(s) 653
BstDSI CCRYGG 1 cut(s) 301
BstF5I GGATG 2 cut(s) 440, 495
BstFNI CGCG 1 cut(s) 602
BstHHI GCGC 1 cut(s) 828
BstKTI GATC 8 cut(s) 73, 139, 391, 405, 615, 628, 733, 900
BstMAI GTCTC 2 cut(s) 390, 531
BstMBI GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
BstMWI GCNNNNNNNGC 3 cut(s) 365, 759, 768
BstNI CCWGG 1 cut(s) 428
BstNSI RCATGY 1 cut(s) 652
BstSCI CCNGG 1 cut(s) 426
BstSFI CTRYAG 3 cut(s) 165, 230, 616
BstUI CGCG 1 cut(s) 602
BstV1I GCAGC 1 cut(s) 258
BstX2I RGATCY 1 cut(s) 402
BstYI RGATCY 1 cut(s) 402
BsuRI GGCC 2 cut(s) 171, 502
BtgI CCRYGG 1 cut(s) 301
BtgZI GCGATG 1 cut(s) 636
BtsCI GGATG 2 cut(s) 440, 495
BtsIMutI CAGTG 2 cut(s) 63, 459
BveI ACCTGC 2 cut(s) 223, 767
Cac8I GCNNGC 2 cut(s) 357, 650
CfoI GCGC 1 cut(s) 828
Cfr13I GGNCC 1 cut(s) 170
CseI GACGC 1 cut(s) 162
Csp6I GTAC 1 cut(s) 908
CviAII CATG 5 cut(s) 221, 302, 392, 518, 649
CviQI GTAC 1 cut(s) 908
DdeI CTNAG 1 cut(s) 653
DpnI GATC 8 cut(s) 72, 138, 390, 404, 614, 627, 732, 899
DpnII GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
DraIII CACNNNGTG 1 cut(s) 463
Eam1104I CTCTTC 1 cut(s) 800
EarI CTCTTC 1 cut(s) 800
Ecl136II GAGCTC 1 cut(s) 481
Eco130I CCWWGG 4 cut(s) 43, 301, 369, 406
Eco24I GRGCYC 1 cut(s) 483
Eco53kI GAGCTC 1 cut(s) 481
Eco57I CTGAAG 1 cut(s) 703
EcoICRI GAGCTC 1 cut(s) 481
EcoRI GAATTC 1 cut(s) 436
EcoRII CCWGG 1 cut(s) 426
EcoT14I CCWWGG 4 cut(s) 43, 301, 369, 406
EcoT38I GRGCYC 1 cut(s) 483
ErhI CCWWGG 4 cut(s) 43, 301, 369, 406
Esp3I CGTCTC 1 cut(s) 390
FaeI CATG 5 cut(s) 224, 305, 395, 521, 652
FalI AAGNNNNNCTT 2 cut(s) 551, 583
FatI CATG 5 cut(s) 220, 301, 391, 517, 648
FauI CCCGC 1 cut(s) 64
FbaI TGATCA 1 cut(s) 388
Fnu4HI GCNGC 3 cut(s) 60, 272, 603
FokI GGATG 2 cut(s) 427, 502
FriOI GRGCYC 1 cut(s) 483
Fsp4HI GCNGC 3 cut(s) 60, 272, 603
FspBI CTAG 2 cut(s) 150, 575
GlaI GCGC 1 cut(s) 827
GluI GCNGC 3 cut(s) 60, 272, 603
HaeIII GGCC 2 cut(s) 171, 502
HgaI GACGC 1 cut(s) 162
HhaI GCGC 1 cut(s) 828
Hin1I GRCGYC 1 cut(s) 834
Hin1II CATG 5 cut(s) 224, 305, 395, 521, 652
Hin6I GCGC 1 cut(s) 826
HinP1I GCGC 1 cut(s) 826
HindIII AAGCTT 1 cut(s) 589
HinfI GANTC 2 cut(s) 11, 37
HphI GGTGA 4 cut(s) 32, 37, 82, 443
Hpy166II GTNNAC 1 cut(s) 180
Hpy188I TCNGA 4 cut(s) 16, 262, 295, 933
Hpy188III TCNNGA 3 cut(s) 317, 476, 509
Hpy8I GTNNAC 1 cut(s) 180
Hpy99I CGWCG 1 cut(s) 836
HpyAV CCTTC 2 cut(s) 103, 853
HpyCH4III ACNGT 5 cut(s) 115, 184, 416, 463, 551
HpyCH4IV ACGT 3 cut(s) 738, 774, 834
HpyCH4V TGCA 4 cut(s) 232, 274, 285, 359
HpyF10VI GCNNNNNNNGC 3 cut(s) 365, 759, 768
HpyF3I CTNAG 1 cut(s) 653
HpySE526I ACGT 3 cut(s) 738, 774, 834
Hsp92I GRCGYC 1 cut(s) 834
Hsp92II CATG 5 cut(s) 224, 305, 395, 521, 652
HspAI GCGC 1 cut(s) 826
Ksp22I TGATCA 1 cut(s) 388
Kzo9I GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
Lsp1109I GCAGC 1 cut(s) 258
LweI GCATC 1 cut(s) 837
MaeI CTAG 2 cut(s) 150, 575
MaeII ACGT 3 cut(s) 738, 774, 834
MaeIII GTNAC 3 cut(s) 184, 677, 835
MalI GATC 8 cut(s) 72, 138, 390, 404, 614, 627, 732, 899
MboI GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
MboII GAAGA 6 cut(s) 131, 134, 137, 794, 817, 890
MfeI CAATTG 1 cut(s) 633
MflI RGATCY 1 cut(s) 402
MhlI GDGCHC 1 cut(s) 483
MluCI AATT 5 cut(s) 157, 263, 431, 436, 633
MmeI TCCRAC 1 cut(s) 533
MnlI CCTC 6 cut(s) 16, 63, 115, 298, 801, 866
MseI TTAA 1 cut(s) 917
MspR9I CCNGG 1 cut(s) 428
MunI CAATTG 1 cut(s) 633
Mva1269I GAATGC 1 cut(s) 196
MvaI CCWGG 1 cut(s) 428
MvnI CGCG 1 cut(s) 602
MwoI GCNNNNNNNGC 3 cut(s) 365, 759, 768
NcoI CCATGG 1 cut(s) 301
NdeII GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
NlaIII CATG 5 cut(s) 224, 305, 395, 521, 652
NmuCI GTSAC 3 cut(s) 184, 677, 835
NspI RCATGY 1 cut(s) 652
PaeI GCATGC 1 cut(s) 652
PaqCI CACCTGC 2 cut(s) 223, 767
PctI GAATGC 1 cut(s) 196
PfeI GAWTC 2 cut(s) 11, 37
PflMI CCANNNNNTGG 1 cut(s) 463
PkrI GCNGC 3 cut(s) 61, 273, 604
Psp124BI GAGCTC 1 cut(s) 483
Psp1406I AACGTT 1 cut(s) 738
Psp6I CCWGG 1 cut(s) 426
PspGI CCWGG 1 cut(s) 426
PspPI GGNCC 1 cut(s) 170
PstI CTGCAG 1 cut(s) 234
PsuI RGATCY 1 cut(s) 402
RsaI GTAC 1 cut(s) 909
RsaNI GTAC 1 cut(s) 908
SacI GAGCTC 1 cut(s) 483
SaqAI TTAA 1 cut(s) 917
SatI GCNGC 3 cut(s) 60, 272, 603
Sau3AI GATC 8 cut(s) 70, 136, 388, 402, 612, 625, 730, 897
Sau96I GGNCC 1 cut(s) 170
ScrFI CCNGG 1 cut(s) 428
SduI GDGCHC 1 cut(s) 483
SfaNI GCATC 1 cut(s) 837
SfcI CTRYAG 3 cut(s) 165, 230, 616
SpeI ACTAGT 1 cut(s) 574
SphI GCATGC 1 cut(s) 652
Sse9I AATT 5 cut(s) 157, 263, 431, 436, 633
SsiI CCGC 3 cut(s) 57, 60, 602
SspMI CTAG 2 cut(s) 150, 575
SstI GAGCTC 1 cut(s) 483
StyD4I CCNGG 1 cut(s) 426
StyI CCWWGG 4 cut(s) 43, 301, 369, 406
TaaI ACNGT 5 cut(s) 115, 184, 416, 463, 551
TaiI ACGT 3 cut(s) 741, 777, 837
TaqI TCGA 2 cut(s) 831, 913
TasI AATT 5 cut(s) 157, 263, 431, 436, 633
TatI WGTACW 1 cut(s) 907
TauI GCSGC 2 cut(s) 62, 605
TfiI GAWTC 2 cut(s) 11, 37
Tru1I TTAA 1 cut(s) 917
Tru9I TTAA 1 cut(s) 917
TscAI CASTG 2 cut(s) 70, 466
TseFI GTSAC 3 cut(s) 184, 677, 835
TseI GCWGC 1 cut(s) 271
Tsp45I GTSAC 3 cut(s) 184, 677, 835
TspDTI ATGAA 2 cut(s) 429, 583
TspGWI ACGGA 1 cut(s) 206
TspRI CASTG 2 cut(s) 70, 466
Van91I CCANNNNNTGG 1 cut(s) 463
XapI RAATTY 2 cut(s) 263, 436
XceI RCATGY 1 cut(s) 652
XspI CTAG 2 cut(s) 150, 575
ZraI GACGTC 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.