AT1G80000

CASC3/Barentsz eIF4AIII binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005735
Physical Location & Seq
Forward (+)
30092807 .. 30097323
4517 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G80000.1

Sequence Viewer

Length: 1818 bp
ATGGCCCCTGATGGCGTTGAAGACTCCGACTATGAGAGTGATCCCGACGAGTTGAACCGCTCCTTGGCTACACGGAGGAGAGAAGCCAGCGATGATGATGAGGATGATGAAGAAGCGGACGACCATGATAAGCTGCGAGCAGCAATCCAGATTCATTCCGATGAACACAGTGGTGTTGTTGTTGTCGACTCTGATGATAATGAAGGATTGCACATAGAAGATAGTTATGGTGATGATGACGACGAAGAGGAAGATGGTGATTATGGACAAGTTGATGACCATGTCGAATACATTGCGGATAATAATGACAAGACAATTGTCGCCGGCAATGGGACCGATGACTCTGCCGCCACTGATCTTGTGGATGGAGAGGAACAAAAGAAGAAGGAACCTTTTGCAGTGCCTACTGCTGGAGCTTTCTATATGCATGATGACAGATTTCAGGAATTGGATGCCGCCTCTAATAGGCGAATGCGTGGTGGTAGGAGGCTCTGGCAATCCAGAGATGAAAGAAAGTGGGGACATGACAAATTCGAGGAAATGAATACACAGAAACAGCAATATGATAGGAGGACTTCGAGAGGCCGAGGCAGAGGTCGTGGTCAGGGTAGGGGTCAGGACCGTGGACAGTCTCGGGGGAACAATTCTAAAGAATTTACTGGCAATGGACACCAAAATCAGTTTCCGAAGGCTGTCACGAGAGGGAGGGGGGCCAGAAGATATGAGGTTGCATTGAGAAATGGGAATCAAGCACCTTCTGTGCAAACCAAACAGTCCCAAAATTCGTCTGTGGAAGTGTCACACGTTGATTTAGGGCGTCCACCAACAGAAACAGCTACCTTAGAGACTGAAGCCATCCAAGCCAAAAAGAATGTATTTGCTTCAAGTTTAAATTCAGCTTCTCCTCCATTTTATCCTTCAAGATCCAACAATAACTTGGCACAAAAGGATGTACAAGCTGGCATGGGTAGGCTGCACATTAATGAAAACCCTAATCCGACTGGAAAGAAGTTTGGGAATACAAAATCCAGCTCCTTGTGGGGACGCACTGCTCAGACTACAAGTCATGGTAGAGGTGTACCTCCTCATGGGCAAGTGCTTTACCAGCAATCTCCTAATCAAGGTGACAAAGTTTCTTCGCCGATGCAAATCCGTGGAATGCCTAAAGGCACTGACCAGAGCTGTACTCAACTTCCTGGTCAGGTTTTTAATCAACATTCGGCTGTTATCAGTTTGCTGCCTTCTTCTCCTCCAAAAACCGGATCATCAGAAAATCCGTATCTTTCTGGTGAAATAGAGTCAGCCGTAGAAACAGGTGCTTTGGTTGCCAAGGGAAAAGGGTCTCTCCAACCTAGTGGAAGGGGATCTTTTATGTATGGAGGGACACAGTTTATGGGCCCTGCCGGGATGGCAGCTGGTCACGGCAATCCAAATTTCCCTGCTTTTCTACCTGTTATGCAATTCGGTGGTCAGCATGGTGGGGTTCCAACTTTTGGAATGGCTCTTCCAGGTTATTTCCAACCAGAACATGGTACCGGAAATCCTGAGATGACATGGCTGCCAATTTTGGCTGGCCCTGGAGCATTAGGGGGTTCATATTGTCCACCTTATACTGTCCTTGATGGTTCTTACCAAGCAGACAAACCAGGGTTACCTTCCTCTGCCGGATCGTCCAGCCAAGAGAACAGTTCCAATAATCCTAATGATGAAGAGCCCATGGAGAGACCTGAGGTTACGAACAATGGGAATTCTCAACGGTCAAATAGCAACCCAAACAAGCAGCCTCGTAGATACTCGGAGATGAGCTTTAGCAAGTGA

Protein Analysis

605

Amino Acids

65.69

Weight (kDa)

5.19

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Btz PF09405 110 - 202 3.8e-25 CASC3/Barentsz eIF4AIII binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1532
AccB1I GGYRCC 1 cut(s) 1532
AccB7I CCANNNNNTGG 2 cut(s) 1493, 1529
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 1 cut(s) 186
AciI CCGC 5 cut(s) 58, 116, 296, 348, 456
AclWI GGATC 5 cut(s) 35, 918, 1270, 1372, 1675
AcsI RAATTY 6 cut(s) 530, 653, 781, 892, 1432, 1747
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 1 cut(s) 817
AfaI GTAC 4 cut(s) 954, 1080, 1186, 1534
AfiI CCNNNNNNNGG 9 cut(s) 64, 330, 410, 465, 1088, 1121, 1259, 1493, 1529
AflIII ACRYGT 1 cut(s) 802
AgsI TTSAA 4 cut(s) 20, 55, 885, 921
AhdI GACNNNNNGTC 1 cut(s) 1062
AjnI CCWGG 4 cut(s) 1195, 1507, 1576, 1645
AjuI GAANNNNNNNTTGG 4 cut(s) 47, 79, 666, 698
AleI CACNNNNGTG 1 cut(s) 171
AluBI AGCT 9 cut(s) 133, 416, 836, 899, 959, 1032, 1182, 1415, 1806
AluI AGCT 9 cut(s) 133, 416, 836, 899, 959, 1032, 1182, 1415, 1806
Alw26I GTCTC 4 cut(s) 636, 839, 1347, 1717
AlwI GGATC 5 cut(s) 35, 918, 1270, 1372, 1675
Ama87I CYCGRG 1 cut(s) 633
AoxI GGCC 5 cut(s) 3, 583, 711, 1396, 1573
ApaI GGGCCC 1 cut(s) 1400
ApeKI GCWGC 7 cut(s) 133, 140, 973, 1237, 1412, 1558, 1780
ApoI RAATTY 6 cut(s) 530, 653, 781, 892, 1432, 1747
AseI ATTAAT 1 cut(s) 981
Asp718I GGTACC 1 cut(s) 1532
AspS9I GGNCC 7 cut(s) 4, 333, 619, 711, 1396, 1397, 1574
AsuC2I CCSGG 1 cut(s) 1405
AsuHPI GGTGA 4 cut(s) 242, 269, 1136, 1301
AvaI CYCGRG 1 cut(s) 633
AvaII GGWCC 2 cut(s) 333, 619
AxyI CCTNAGG 1 cut(s) 1728
BaeGI GKGCMC 1 cut(s) 1400
BanI GGYRCC 1 cut(s) 1532
BanII GRGCYC 2 cut(s) 1400, 1716
BauI CACGAG 1 cut(s) 697
BbsI GAAGAC 1 cut(s) 27
BbvI GCAGC 7 cut(s) 120, 152, 960, 1224, 1424, 1545, 1792
BccI CCATC 6 cut(s) 5, 248, 359, 863, 1402, 1616
BceAI ACGGC 2 cut(s) 1289, 1438
BcgI CGANNNNNNTGC 4 cut(s) 275, 309, 326, 360
BciT130I CCWGG 4 cut(s) 1197, 1509, 1578, 1647
BcnI CCSGG 1 cut(s) 1405
BcoDI GTCTC 4 cut(s) 636, 839, 1347, 1717
BfaI CTAG 1 cut(s) 1353
BglI GCCNNNNNGGC 1 cut(s) 1409
BisI GCNGC 9 cut(s) 134, 141, 348, 456, 974, 1238, 1413, 1559, 1781
BlsI GCNGC 9 cut(s) 135, 142, 349, 457, 975, 1239, 1414, 1560, 1782
Bme1390I CCNGG 5 cut(s) 1197, 1405, 1509, 1578, 1647
Bme18I GGWCC 2 cut(s) 333, 619
BmeRI GACNNNNNGTC 1 cut(s) 1062
BmeT110I CYCGRG 1 cut(s) 633
BmgT120I GGNCC 7 cut(s) 4, 333, 619, 711, 1396, 1397, 1574
BmiI GGNNCC 7 cut(s) 6, 334, 390, 712, 1398, 1485, 1534
BmrFI CCNGG 5 cut(s) 1197, 1405, 1509, 1578, 1647
BmsI GCATC 2 cut(s) 442, 1134
BoxI GACNNNNGTC 1 cut(s) 317
BpiI GAAGAC 1 cut(s) 27
BplI GAGNNNNNCTC 2 cut(s) 1171, 1203
BpmI CTGGAG 2 cut(s) 432, 1599
BpuMI CCSGG 1 cut(s) 1405
BsaBI GATNNNNATC 1 cut(s) 1148
BsaHI GRCGYC 1 cut(s) 817
BsaI GGTCTC 2 cut(s) 1347, 1717
BsaJI CCNNGG 8 cut(s) 63, 586, 622, 1153, 1329, 1576, 1646, 1716
BsaWI WCCGGW 2 cut(s) 1259, 1535
Bsc4I CCNNNNNNNGG 9 cut(s) 64, 330, 410, 465, 1088, 1121, 1259, 1493, 1529
Bse118I RCCGGY 1 cut(s) 323
Bse1I ACTGG 2 cut(s) 664, 1006
Bse21I CCTNAGG 1 cut(s) 1728
Bse3DI GCAATG 3 cut(s) 291, 334, 670
Bse8I GATNNNNATC 1 cut(s) 1148
BseBI CCWGG 4 cut(s) 1197, 1509, 1578, 1647
BseDI CCNNGG 8 cut(s) 63, 586, 622, 1153, 1329, 1576, 1646, 1716
BseGI GGATG 6 cut(s) 109, 370, 457, 855, 955, 1413
BseJI GATNNNNATC 1 cut(s) 1148
BseLI CCNNNNNNNGG 9 cut(s) 64, 330, 410, 465, 1088, 1121, 1259, 1493, 1529
BseMI GCAATG 3 cut(s) 291, 334, 670
BseMII CTCAG 3 cut(s) 1067, 1536, 1719
BseNI ACTGG 2 cut(s) 664, 1006
BseRI GAGGAG 4 cut(s) 91, 894, 1074, 1239
BseSI GKGCMC 1 cut(s) 1400
BseXI GCAGC 7 cut(s) 120, 152, 960, 1224, 1424, 1545, 1792
BsgI GTGCAG 1 cut(s) 959
BshFI GGCC 5 cut(s) 5, 585, 713, 1398, 1575
BshNI GGYRCC 1 cut(s) 1532
BsiHKCI CYCGRG 1 cut(s) 633
BsiSI CCGG 5 cut(s) 324, 1260, 1404, 1536, 1665
BslFI GGGAC 5 cut(s) 346, 534, 760, 1056, 1396
BslI CCNNNNNNNGG 9 cut(s) 64, 330, 410, 465, 1088, 1121, 1259, 1493, 1529
BsmAI GTCTC 4 cut(s) 636, 839, 1347, 1717
BsmFI GGGAC 5 cut(s) 346, 534, 760, 1056, 1396
BsmI GAATGC 2 cut(s) 477, 1164
BsnI GGCC 5 cut(s) 5, 585, 713, 1398, 1575
Bso31I GGTCTC 2 cut(s) 1347, 1717
BsoBI CYCGRG 1 cut(s) 633
Bsp120I GGGCCC 1 cut(s) 1396
Bsp1286I GDGCHC 2 cut(s) 1400, 1716
Bsp1407I TGTACA 1 cut(s) 952
Bsp143I GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
Bsp19I CCATGG 1 cut(s) 1716
BspACI CCGC 5 cut(s) 58, 116, 296, 348, 456
BspANI GGCC 5 cut(s) 5, 585, 713, 1398, 1575
BspCNI CTCAG 3 cut(s) 1066, 1537, 1720
BspLI GGNNCC 7 cut(s) 6, 334, 390, 712, 1398, 1485, 1534
BspPI GGATC 5 cut(s) 35, 918, 1270, 1372, 1675
BspQI GCTCTTC 2 cut(s) 1509, 1704
BspT107I GGYRCC 1 cut(s) 1532
BspTNI GGTCTC 2 cut(s) 1347, 1717
BsrBI CCGCTC 1 cut(s) 60
BsrDI GCAATG 3 cut(s) 291, 334, 670
BsrFI RCCGGY 1 cut(s) 323
BsrGI TGTACA 1 cut(s) 952
BsrI ACTGG 2 cut(s) 664, 1006
BssAI RCCGGY 1 cut(s) 323
BssECI CCNNGG 8 cut(s) 63, 586, 622, 1153, 1329, 1576, 1646, 1716
BssMI GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
BssNI GRCGYC 1 cut(s) 817
BssSI CACGAG 1 cut(s) 697
BssT1I CCWWGG 3 cut(s) 63, 1329, 1716
Bst2BI CACGAG 1 cut(s) 697
Bst2UI CCWGG 4 cut(s) 1197, 1509, 1578, 1647
Bst4CI ACNGT 8 cut(s) 170, 623, 630, 774, 1389, 1615, 1688, 1758
Bst6I CTCTTC 3 cut(s) 240, 1509, 1704
BstACI GRCGYC 1 cut(s) 817
BstAUI TGTACA 1 cut(s) 952
BstC8I GCNNGC 5 cut(s) 88, 138, 325, 961, 1573
BstDEI CTNAG 4 cut(s) 841, 1053, 1545, 1728
BstDSI CCRYGG 3 cut(s) 622, 1153, 1716
BstEII GGTNACC 1 cut(s) 1650
BstENI CCTNNNNNAGG 2 cut(s) 463, 1119
BstF5I GGATG 6 cut(s) 109, 370, 457, 855, 955, 1413
BstKTI GATC 6 cut(s) 43, 358, 926, 1265, 1367, 1670
BstMAI GTCTC 4 cut(s) 636, 839, 1347, 1717
BstMBI GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
BstMWI GCNNNNNNNGC 4 cut(s) 860, 1105, 1325, 1409
BstNI CCWGG 4 cut(s) 1197, 1509, 1578, 1647
BstPAI GACNNNNGTC 1 cut(s) 317
BstPI GGTNACC 1 cut(s) 1650
BstSCI CCNGG 5 cut(s) 1195, 1403, 1507, 1576, 1645
BstSLI GKGCMC 1 cut(s) 1400
BstV1I GCAGC 7 cut(s) 120, 152, 960, 1224, 1424, 1545, 1792
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 2 cut(s) 923, 1364
BstXI CCANNNNNNTGG 1 cut(s) 1355
BstYI RGATCY 2 cut(s) 923, 1364
Bsu36I CCTNAGG 1 cut(s) 1728
BsuRI GGCC 5 cut(s) 5, 585, 713, 1398, 1575
BtgI CCRYGG 3 cut(s) 622, 1153, 1716
BtgZI GCGATG 1 cut(s) 105
BtsCI GGATG 6 cut(s) 109, 370, 457, 855, 955, 1413
BtsI GCAGTG 2 cut(s) 405, 1047
BtsIMutI CAGTG 5 cut(s) 175, 351, 405, 1047, 1170
Cac8I GCNNGC 5 cut(s) 88, 138, 325, 961, 1573
Cfr10I RCCGGY 1 cut(s) 323
Cfr13I GGNCC 7 cut(s) 4, 333, 619, 711, 1396, 1397, 1574
CseI GACGC 2 cut(s) 806, 1053
Csp6I GTAC 4 cut(s) 953, 1079, 1185, 1533
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviQI GTAC 4 cut(s) 953, 1079, 1185, 1533
DdeI CTNAG 4 cut(s) 841, 1053, 1545, 1728
DpnI GATC 6 cut(s) 42, 357, 925, 1264, 1366, 1669
DpnII GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
DraI TTTAAA 1 cut(s) 891
DriI GACNNNNNGTC 1 cut(s) 1062
Eam1104I CTCTTC 3 cut(s) 240, 1509, 1704
Eam1105I GACNNNNNGTC 1 cut(s) 1062
EarI CTCTTC 3 cut(s) 240, 1509, 1704
Eco130I CCWWGG 3 cut(s) 63, 1329, 1716
Eco24I GRGCYC 2 cut(s) 1400, 1716
Eco31I GGTCTC 2 cut(s) 1347, 1717
Eco47I GGWCC 2 cut(s) 333, 619
Eco57I CTGAAG 1 cut(s) 870
Eco81I CCTNAGG 1 cut(s) 1728
Eco88I CYCGRG 1 cut(s) 633
Eco91I GGTNACC 1 cut(s) 1650
EcoNI CCTNNNNNAGG 2 cut(s) 463, 1119
EcoO109I RGGNCCY 1 cut(s) 1397
EcoO65I GGTNACC 1 cut(s) 1650
EcoRI GAATTC 1 cut(s) 1747
EcoRII CCWGG 4 cut(s) 1195, 1507, 1576, 1645
EcoT14I CCWWGG 3 cut(s) 63, 1329, 1716
EcoT22I ATGCAT 1 cut(s) 429
EcoT38I GRGCYC 2 cut(s) 1400, 1716
ErhI CCWWGG 3 cut(s) 63, 1329, 1716
FalI AAGNNNNNCTT 2 cut(s) 1351, 1383
FaqI GGGAC 5 cut(s) 346, 534, 760, 1056, 1396
FblI GTMKAC 1 cut(s) 186
Fnu4HI GCNGC 9 cut(s) 134, 141, 348, 456, 974, 1238, 1413, 1559, 1781
FokI GGATG 6 cut(s) 116, 377, 464, 842, 962, 1420
FriOI GRGCYC 2 cut(s) 1400, 1716
Fsp4HI GCNGC 9 cut(s) 134, 141, 348, 456, 974, 1238, 1413, 1559, 1781
FspBI CTAG 1 cut(s) 1353
GluI GCNGC 9 cut(s) 134, 141, 348, 456, 974, 1238, 1413, 1559, 1781
GsuI CTGGAG 2 cut(s) 432, 1599
HaeIII GGCC 5 cut(s) 5, 585, 713, 1398, 1575
HapII CCGG 5 cut(s) 324, 1260, 1404, 1536, 1665
HgaI GACGC 2 cut(s) 806, 1053
Hin1I GRCGYC 1 cut(s) 817
HincII GTYRAC 1 cut(s) 187
HindII GTYRAC 1 cut(s) 187
HinfI GANTC 6 cut(s) 23, 151, 188, 341, 745, 1298
HpaII CCGG 5 cut(s) 324, 1260, 1404, 1536, 1665
HphI GGTGA 4 cut(s) 242, 269, 1136, 1301
Hpy166II GTNNAC 5 cut(s) 187, 626, 821, 1079, 1604
Hpy188I TCNGA 8 cut(s) 28, 160, 193, 687, 999, 1056, 1270, 1798
Hpy188III TCNNGA 9 cut(s) 44, 148, 443, 501, 579, 617, 697, 921, 1544
Hpy8I GTNNAC 5 cut(s) 187, 626, 821, 1079, 1604
Hpy99I CGWCG 2 cut(s) 50, 245
HpyAV CCTTC 8 cut(s) 197, 379, 682, 765, 927, 1251, 1353, 1665
HpyCH4III ACNGT 8 cut(s) 170, 623, 630, 774, 1389, 1615, 1688, 1758
HpyCH4IV ACGT 1 cut(s) 804
HpyCH4V TGCA 8 cut(s) 211, 398, 427, 731, 763, 976, 1147, 1459
HpyF10VI GCNNNNNNNGC 4 cut(s) 860, 1105, 1325, 1409
HpyF3I CTNAG 4 cut(s) 841, 1053, 1545, 1728
HpySE526I ACGT 1 cut(s) 804
Hsp92I GRCGYC 1 cut(s) 817
KpnI GGTACC 1 cut(s) 1536
KroI GCCGGC 1 cut(s) 323
KroNI GCCGGC 1 cut(s) 325
Kzo9I GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
LguI GCTCTTC 2 cut(s) 1509, 1704
LmnI GCTCC 4 cut(s) 65, 413, 1037, 1580
Lsp1109I GCAGC 7 cut(s) 120, 152, 960, 1224, 1424, 1545, 1792
LweI GCATC 2 cut(s) 442, 1134
MaeI CTAG 1 cut(s) 1353
MaeII ACGT 1 cut(s) 804
MaeIII GTNAC 6 cut(s) 694, 798, 1124, 1418, 1650, 1732
MalI GATC 6 cut(s) 42, 357, 925, 1264, 1366, 1669
MbiI CCGCTC 1 cut(s) 60
MboI GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
MfeI CAATTG 1 cut(s) 315
MflI RGATCY 2 cut(s) 923, 1364
MhlI GDGCHC 2 cut(s) 1400, 1716
MlyI GAGTC 4 cut(s) 17, 182, 335, 1307
MmeI TCCRAC 6 cut(s) 51, 951, 1022, 1372, 1511, 1543
Mph1103I ATGCAT 1 cut(s) 429
MroNI GCCGGC 1 cut(s) 323
MseI TTAA 3 cut(s) 890, 981, 1209
MslI CAYNNNNRTG 3 cut(s) 159, 171, 981
MspA1I CMGCKG 1 cut(s) 1415
MspI CCGG 5 cut(s) 324, 1260, 1404, 1536, 1665
MspR9I CCNGG 5 cut(s) 1197, 1405, 1509, 1578, 1647
MunI CAATTG 1 cut(s) 315
Mva1269I GAATGC 2 cut(s) 477, 1164
MvaI CCWGG 4 cut(s) 1197, 1509, 1578, 1647
MwoI GCNNNNNNNGC 4 cut(s) 860, 1105, 1325, 1409
NaeI GCCGGC 1 cut(s) 325
NciI CCSGG 1 cut(s) 1405
NcoI CCATGG 1 cut(s) 1716
NdeII GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
NgoMIV GCCGGC 1 cut(s) 323
NlaIV GGNNCC 7 cut(s) 6, 334, 390, 712, 1398, 1485, 1534
NmeAIII GCCGAG 1 cut(s) 611
NmuCI GTSAC 4 cut(s) 694, 798, 1124, 1418
NsiI ATGCAT 1 cut(s) 429
OliI CACNNNNGTG 1 cut(s) 171
PciSI GCTCTTC 2 cut(s) 1509, 1704
PctI GAATGC 2 cut(s) 477, 1164
PdiI GCCGGC 1 cut(s) 325
PfeI GAWTC 2 cut(s) 151, 745
PflFI GACNNNGTC 1 cut(s) 281
PflMI CCANNNNNTGG 2 cut(s) 1493, 1529
PkrI GCNGC 9 cut(s) 135, 142, 349, 457, 975, 1239, 1414, 1560, 1782
PleI GAGTC 4 cut(s) 17, 182, 335, 1306
PpsI GAGTC 4 cut(s) 17, 182, 335, 1306
PshAI GACNNNNGTC 1 cut(s) 317
PshBI ATTAAT 1 cut(s) 981
Psp6I CCWGG 4 cut(s) 1195, 1507, 1576, 1645
PspEI GGTNACC 1 cut(s) 1650
PspGI CCWGG 4 cut(s) 1195, 1507, 1576, 1645
PspN4I GGNNCC 7 cut(s) 6, 334, 390, 712, 1398, 1485, 1534
PspOMI GGGCCC 1 cut(s) 1396
PspPI GGNCC 7 cut(s) 4, 333, 619, 711, 1396, 1397, 1574
PsuI RGATCY 2 cut(s) 923, 1364
PsyI GACNNNGTC 1 cut(s) 281
PvuII CAGCTG 1 cut(s) 1415
RsaI GTAC 4 cut(s) 954, 1080, 1186, 1534
RsaNI GTAC 4 cut(s) 953, 1079, 1185, 1533
RseI CAYNNNNRTG 3 cut(s) 159, 171, 981
SalI GTCGAC 1 cut(s) 185
SapI GCTCTTC 2 cut(s) 1509, 1704
SaqAI TTAA 3 cut(s) 890, 981, 1209
SatI GCNGC 9 cut(s) 134, 141, 348, 456, 974, 1238, 1413, 1559, 1781
Sau3AI GATC 6 cut(s) 40, 355, 923, 1262, 1364, 1667
Sau96I GGNCC 7 cut(s) 4, 333, 619, 711, 1396, 1397, 1574
SchI GAGTC 4 cut(s) 17, 182, 335, 1307
ScrFI CCNGG 5 cut(s) 1197, 1405, 1509, 1578, 1647
SduI GDGCHC 2 cut(s) 1400, 1716
SfaNI GCATC 2 cut(s) 442, 1134
SinI GGWCC 2 cut(s) 333, 619
SmiMI CAYNNNNRTG 3 cut(s) 159, 171, 981
SsiI CCGC 5 cut(s) 58, 116, 296, 348, 456
SspMI CTAG 1 cut(s) 1353
StyD4I CCNGG 5 cut(s) 1195, 1403, 1507, 1576, 1645
StyI CCWWGG 3 cut(s) 63, 1329, 1716
TaaI ACNGT 8 cut(s) 170, 623, 630, 774, 1389, 1615, 1688, 1758
TaiI ACGT 1 cut(s) 807
TaqI TCGA 4 cut(s) 186, 285, 534, 578
TaqII GACCGA 1 cut(s) 350
TatI WGTACW 2 cut(s) 952, 1184
TauI GCSGC 2 cut(s) 350, 458
TfiI GAWTC 2 cut(s) 151, 745
Tru1I TTAA 3 cut(s) 890, 981, 1209
Tru9I TTAA 3 cut(s) 890, 981, 1209
TscAI CASTG 5 cut(s) 175, 358, 405, 1054, 1177
TseFI GTSAC 4 cut(s) 694, 798, 1124, 1418
TseI GCWGC 7 cut(s) 133, 140, 973, 1237, 1412, 1558, 1780
Tsp45I GTSAC 4 cut(s) 694, 798, 1124, 1418
TspDTI ATGAA 9 cut(s) 123, 143, 177, 216, 522, 557, 999, 1584, 1722
TspGWI ACGGA 3 cut(s) 88, 1142, 1266
TspRI CASTG 5 cut(s) 175, 358, 405, 1054, 1177
Tth111I GACNNNGTC 1 cut(s) 281
Van91I CCANNNNNTGG 2 cut(s) 1493, 1529
VpaK11BI GGWCC 2 cut(s) 333, 619
VspI ATTAAT 1 cut(s) 981
XagI CCTNNNNNAGG 2 cut(s) 463, 1119
XapI RAATTY 6 cut(s) 530, 653, 781, 892, 1432, 1747
XcmI CCANNNNNNNNNTGG 3 cut(s) 358, 934, 1526
XmiI GTMKAC 1 cut(s) 186
XspI CTAG 1 cut(s) 1353
Zsp2I ATGCAT 1 cut(s) 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.