Rh2CG378200

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0005735
Physical Location & Seq
Reverse (-)
51626784 .. 51632258
5475 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG378200.1

Sequence Viewer

Length: 2073 bp
ATGGCTACGGTGGGGGAGGAAGATGTGGAGTACGACAGTGATCCAGAGGAGGTTAAACGATCGCTGGCGATGAGGAGGCGGGCGGCGGCGAGCGACGATGAGGAAGGTGAAGGAGAGGGGAGGGAGAAATCGAGGCCGGATCGGAGGGTTCCCATTCACTCTGATGATGAATCGGACGATCAGGGTGGGGCAGCGGAGTATGATGACGACGAAGAATTGGTAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAGATTGATGAGGAAGAAGAAGAGCCGTTTCAGGAGGCCGCCTATGTGGAGAGAGGGCGTGAAGGTGAGACTAGGACTGAGGTTTTGGCGGTGAAGGAATCGGATGGCGGTGACGGGACGAGGTCTGTGGATGGAACGGTGGATGAGCATGGAGAGAATCAGGCCGGAGAAGGTGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGAATGAACCCTTTGCAGTGCCCACAGCTGGGGCGTTCTATATGCATGATGACCGATTCAGGGACAATGCCGGTGGTCGGAACAGGCGAACACATGGTGGAAGGAAGCTATGGGAGTCTAAAGATGACAGGAAGTGGGGGCATGACAAGTTTGAGGAGATAACTTTGCACGAAAGGCACCACGAAGAGGGCAGGAGACCTTCTAGGGGAAATTTTCGGGGTAGAGGAAGAAACCGAGGTATTGATCGTGGGTACGCTACAGGAAACAGGTCTAAAGAGTATGAGAATAATAATCAGAGACCGGTACCCAAGGGTGTGAGAGGGAGAGGGCCCAGAAGATATGAACCTGCTTTTAGGAATAACAGACAGACGCCTTCCACACAAAATAGACAGTCTGGAAAGCCTGTTGACAAAACTTCACAAACTAATTCAGAGAGGACTTTTGCTCCCCCATCGAATGCAGAATCTGACTCAGTTCCTGCTAGGAAAAATGTCTTTGCATCAAGCCTGAATTCAGCTTCTCCTCCTTTTTATCCATCAGGATCCTCCAATAAGGAGATCAATCTTAATCAAAAAAGGGATGCACATGCTGGGAGTGCTAAGAGGAATGCTCGTCCATCTGTATCAGTGGAGAATTTTTCTGGGCGACAAACCAATGCATATCTGCGAGGGAAGAATGTAGCTGAATCTGTTGGCGTTGGAATGGAAAAGCTTTATGTTGATGATTCGAAGAATCCAGGAGCTGGGAAGACATTGACCACTGTACAAATGCCATCATCTGGGTCTTCAATTGTCAACGCTACTCAACCTTCTCAGTCTAGGGTTCAGGGAAGGGGTGCTGTCACAGGACAGATGAGTTATCGACCTGTTGTTTCTCAGAACCAGATGCCAAGAGCTCCATCACAACAGTTCCATGCTGTTCAGCGTAATCCTGTCCAAAATCGGTCCCAACTAGCTCTTCAAGCTCCTCCCCAGCAGGTGGGACAACGCCCTGGAAGTGGATCTCAAGCCTCCTCTCCACCTAAAACACCTGGAGAAGTTGAACCTGCAGATTCAAGTAAATCTAAAGGTGCACTAGTTGCAAAGGGAAAAGGCAGTGCTCTAGGTAATGGAAGGGGAGCACTTACTTACAATGGGGCTCAGGTTATTGGGGCTTCTGGAGGCATGGGTGTCAATCATGGAGATCAGAACTTTCCTGGGACACCTGCCTTTTTGCCTGTTATGCAATTTGGTGGCCAGCACCCTGGGGGTATGGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCACAACTTGGTGGTGGTATGGGAAATTCTGAAATGACCTGGTTGCCTGTATTAGCGGGTGCTGCAGGAGCTTTAGGGGCTGCCTATTGTCCGCCCTATATTACTGTTGATGGTTCTTATCATGCTCGCCCGTCAGGACAGACATCTGTGGGTTCCTTGAGCAAAGAAAATAATGCAAACAAAACCAATAATGAATGGAAGCCTTCACAAAAGCCTGAAATAGTGGGCGATGATTATGGGCAGCGACAAAACAAGCCTCGTAGATATTCACAGATGAATGTCGCCAGTGAAGTTCTTCAAAATAATACGGAGCTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Btz

Protein Analysis

690

Amino Acids

74.94

Weight (kDa)

5.39

Isoelectric Point (pI)

58.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Btz PF09405 118 - 228 4.1e-20 CASC3/Barentsz eIF4AIII binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1420, 1666
Acc36I ACCTGC 4 cut(s) 808, 1420, 1507, 1666
Acc65I GGTACC 1 cut(s) 757
AccB1I GGYRCC 2 cut(s) 630, 757
AccB7I CCANNNNNTGG 4 cut(s) 1196, 1232, 1432, 1760
AciI CCGC 9 cut(s) 79, 83, 86, 194, 291, 341, 360, 1808, 1844
AclWI GGATC 5 cut(s) 35, 147, 990, 1003, 1462
AcoI YGGCCR 1 cut(s) 1687
AcsI RAATTY 4 cut(s) 664, 964, 1087, 1777
AcyI GRCGYC 1 cut(s) 824
AdeI CACNNNGTG 1 cut(s) 551
AfaI GTAC 4 cut(s) 32, 707, 759, 1218
AgeI ACCGGT 1 cut(s) 754
AgsI TTSAA 5 cut(s) 1242, 1415, 1496, 1509, 2051
AhlI ACTAGT 1 cut(s) 1528
AjnI CCWGG 7 cut(s) 1189, 1444, 1483, 1648, 1696, 1735, 1790
AjuI GAANNNNNNNTTGG 2 cut(s) 1395, 1427
Alw21I GWGCWC 4 cut(s) 1351, 1528, 1555, 1576
Alw26I GTCTC 3 cut(s) 314, 643, 745
Alw44I GTGCAC 1 cut(s) 1524
AlwI GGATC 5 cut(s) 35, 147, 990, 1003, 1462
AlwNI CAGNNNCTG 3 cut(s) 920, 932, 1196
AoxI GGCC 5 cut(s) 134, 288, 414, 782, 1687
ApaI GGGCCC 1 cut(s) 786
ApaLI GTGCAC 1 cut(s) 1524
ApeKI GCWGC 4 cut(s) 191, 1814, 1832, 1993
ApoI RAATTY 4 cut(s) 664, 964, 1087, 1777
ArsI GACNNNNNNTTYG 2 cut(s) 319, 351
AsiGI ACCGGT 1 cut(s) 754
Asp700I GAANNNNTTC 1 cut(s) 2046
Asp718I GGTACC 1 cut(s) 757
AspS9I GGNCC 3 cut(s) 782, 783, 1398
AsuHPI GGTGA 5 cut(s) 119, 329, 355, 374, 437
AsuII TTCGAA 1 cut(s) 1181
AvaII GGWCC 1 cut(s) 1398
BaeGI GKGCMC 3 cut(s) 477, 786, 1528
BalI TGGCCA 1 cut(s) 1689
BamHI GGATCC 1 cut(s) 995
BanI GGYRCC 2 cut(s) 630, 757
BanII GRGCYC 3 cut(s) 786, 1351, 1594
BbsI GAAGAC 3 cut(s) 231, 1208, 1230
Bbv12I GWGCWC 4 cut(s) 1351, 1528, 1555, 1576
BbvI GCAGC 4 cut(s) 203, 1801, 1819, 2005
BccI CCATC 8 cut(s) 350, 377, 913, 997, 1078, 1234, 1360, 1856
BceAI ACGGC 1 cut(s) 262
BciT130I CCWGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
BcoDI GTCTC 3 cut(s) 314, 643, 745
BcuI ACTAGT 1 cut(s) 1528
BfaI CTAG 7 cut(s) 324, 657, 936, 1272, 1406, 1529, 1556
BfmI CTRYAG 3 cut(s) 711, 1500, 1815
BfuAI ACCTGC 4 cut(s) 808, 1420, 1507, 1666
BisI GCNGC 7 cut(s) 84, 87, 192, 291, 1815, 1833, 1994
BlpI GCTNAGC 1 cut(s) 1749
BlsI GCNGC 7 cut(s) 85, 88, 193, 292, 1816, 1834, 1995
Bme1390I CCNGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
Bme18I GGWCC 1 cut(s) 1398
BmgT120I GGNCC 3 cut(s) 782, 783, 1398
BmiI GGNNCC 7 cut(s) 150, 632, 759, 784, 997, 1400, 1906
BmrFI CCNGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
BmsI GCATC 3 cut(s) 962, 1024, 1329
BpiI GAAGAC 3 cut(s) 231, 1208, 1230
BplI GAGNNNNNCTC 2 cut(s) 1048, 1080
BpmI CTGGAG 2 cut(s) 1506, 1632
Bpu10I CCTNAGC 1 cut(s) 1593
Bpu1102I GCTNAGC 1 cut(s) 1749
Bpu14I TTCGAA 1 cut(s) 1181
BpuEI CTTGAG 2 cut(s) 1443, 1930
BsaHI GRCGYC 1 cut(s) 824
BsaI GGTCTC 2 cut(s) 643, 745
BsaJI CCNNGG 7 cut(s) 688, 762, 1444, 1649, 1696, 1697, 1735
BsaWI WCCGGW 1 cut(s) 754
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bse118I RCCGGY 2 cut(s) 524, 754
Bse1I ACTGG 1 cut(s) 2037
BseBI CCWGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
BseDI CCNNGG 7 cut(s) 688, 762, 1444, 1649, 1696, 1697, 1735
BseGI GGATG 4 cut(s) 361, 388, 400, 1039
BseMII CTCAG 6 cut(s) 321, 939, 1280, 1343, 1607, 1763
BseNI ACTGG 1 cut(s) 2037
BseSI GKGCMC 3 cut(s) 477, 786, 1528
BseXI GCAGC 4 cut(s) 203, 1801, 1819, 2005
BseYI CCCAGC 4 cut(s) 482, 1043, 1196, 1425
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 5 cut(s) 136, 290, 416, 784, 1689
BshNI GGYRCC 2 cut(s) 630, 757
BshTI ACCGGT 1 cut(s) 754
BsiEI CGRYCG 1 cut(s) 62
BsiHKAI GWGCWC 4 cut(s) 1351, 1528, 1555, 1576
BsiSI CCGG 4 cut(s) 137, 417, 525, 755
BslFI GGGAC 5 cut(s) 382, 530, 1384, 1449, 1666
BsmAI GTCTC 3 cut(s) 314, 643, 745
BsmFI GGGAC 5 cut(s) 382, 530, 1384, 1449, 1666
BsmI GAATGC 3 cut(s) 916, 1066, 1730
BsnI GGCC 5 cut(s) 136, 290, 416, 784, 1689
Bso31I GGTCTC 2 cut(s) 643, 745
Bsp119I TTCGAA 1 cut(s) 1181
Bsp120I GGGCCC 1 cut(s) 782
Bsp1286I GDGCHC 7 cut(s) 477, 786, 1351, 1528, 1555, 1576, 1594
Bsp1407I TGTACA 1 cut(s) 1216
Bsp143I GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
Bsp1720I GCTNAGC 1 cut(s) 1749
BspACI CCGC 9 cut(s) 79, 83, 86, 194, 291, 341, 360, 1808, 1844
BspANI GGCC 5 cut(s) 136, 290, 416, 784, 1689
BspCNI CTCAG 6 cut(s) 322, 938, 1279, 1342, 1606, 1762
BspLI GGNNCC 7 cut(s) 150, 632, 759, 784, 997, 1400, 1906
BspMAI CTGCAG 2 cut(s) 1504, 1819
BspMI ACCTGC 4 cut(s) 808, 1420, 1507, 1666
BspPI GGATC 5 cut(s) 35, 147, 990, 1003, 1462
BspQI GCTCTTC 2 cut(s) 267, 1416
BspT104I TTCGAA 1 cut(s) 1181
BspT107I GGYRCC 2 cut(s) 630, 757
BspTNI GGTCTC 2 cut(s) 643, 745
BsrFI RCCGGY 2 cut(s) 524, 754
BsrGI TGTACA 1 cut(s) 1216
BsrI ACTGG 1 cut(s) 2037
BssAI RCCGGY 2 cut(s) 524, 754
BssECI CCNNGG 7 cut(s) 688, 762, 1444, 1649, 1696, 1697, 1735
BssMI GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
BssNI GRCGYC 1 cut(s) 824
BssT1I CCWWGG 1 cut(s) 762
Bst2UI CCWGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
Bst4CI ACNGT 7 cut(s) 10, 38, 391, 846, 1216, 1362, 1858
Bst6I CTCTTC 4 cut(s) 246, 267, 633, 1416
BstACI GRCGYC 1 cut(s) 824
BstAPI GCANNNNNTGC 1 cut(s) 1532
BstAUI TGTACA 1 cut(s) 1216
BstBI TTCGAA 1 cut(s) 1181
BstC8I GCNNGC 5 cut(s) 66, 81, 91, 1691, 1879
BstDEI CTNAG 7 cut(s) 330, 925, 1053, 1266, 1329, 1593, 1749
BstF5I GGATG 4 cut(s) 361, 388, 400, 1039
BstKTI GATC 9 cut(s) 43, 62, 142, 181, 700, 998, 1014, 1457, 1639
BstMAI GTCTC 3 cut(s) 314, 643, 745
BstMBI GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
BstMCI CGRYCG 1 cut(s) 62
BstMWI GCNNNNNNNGC 8 cut(s) 628, 1049, 1415, 1532, 1675, 1814, 1820, 1829
BstNI CCWGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
BstNSI RCATGY 1 cut(s) 1043
BstSCI CCNGG 7 cut(s) 1189, 1444, 1483, 1648, 1696, 1735, 1790
BstSFI CTRYAG 3 cut(s) 711, 1500, 1815
BstSLI GKGCMC 3 cut(s) 477, 786, 1528
BstV1I GCAGC 4 cut(s) 203, 1801, 1819, 2005
BstV2I GAAGAC 3 cut(s) 231, 1208, 1230
BstX2I RGATCY 2 cut(s) 995, 1454
BstXI CCANNNNNNTGG 1 cut(s) 1697
BstYI RGATCY 2 cut(s) 995, 1454
BsuRI GGCC 5 cut(s) 136, 290, 416, 784, 1689
BtgZI GCGATG 2 cut(s) 83, 1995
BtsCI GGATG 4 cut(s) 361, 388, 400, 1039
BtsI GCAGTG 2 cut(s) 477, 1555
BtsIMutI CAGTG 6 cut(s) 43, 477, 1086, 1212, 1555, 2044
BveI ACCTGC 4 cut(s) 808, 1420, 1507, 1666
Cac8I GCNNGC 5 cut(s) 66, 81, 91, 1691, 1879
CaiI CAGNNNCTG 3 cut(s) 920, 932, 1196
Cfr10I RCCGGY 2 cut(s) 524, 754
Cfr13I GGNCC 3 cut(s) 782, 783, 1398
CseI GACGC 1 cut(s) 832
CsiI ACCWGGT 1 cut(s) 1790
Csp6I GTAC 4 cut(s) 31, 706, 758, 1217
CspAI ACCGGT 1 cut(s) 754
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviQI GTAC 4 cut(s) 31, 706, 758, 1217
DdeI CTNAG 7 cut(s) 330, 925, 1053, 1266, 1329, 1593, 1749
DpnI GATC 9 cut(s) 42, 61, 141, 180, 699, 997, 1013, 1456, 1638
DpnII GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
DraIII CACNNNGTG 1 cut(s) 551
EaeI YGGCCR 1 cut(s) 1687
Eam1104I CTCTTC 4 cut(s) 246, 267, 633, 1416
EarI CTCTTC 4 cut(s) 246, 267, 633, 1416
EciI GGCGGA 1 cut(s) 1833
Ecl136II GAGCTC 1 cut(s) 1349
Eco130I CCWWGG 1 cut(s) 762
Eco24I GRGCYC 3 cut(s) 786, 1351, 1594
Eco31I GGTCTC 2 cut(s) 643, 745
Eco47I GGWCC 1 cut(s) 1398
Eco53kI GAGCTC 1 cut(s) 1349
EcoICRI GAGCTC 1 cut(s) 1349
EcoO109I RGGNCCY 1 cut(s) 782
EcoRI GAATTC 1 cut(s) 964
EcoRII CCWGG 7 cut(s) 1189, 1444, 1483, 1648, 1696, 1735, 1790
EcoT14I CCWWGG 1 cut(s) 762
EcoT22I ATGCAT 2 cut(s) 501, 1114
EcoT38I GRGCYC 3 cut(s) 786, 1351, 1594
ErhI CCWWGG 1 cut(s) 762
FaqI GGGAC 5 cut(s) 382, 530, 1384, 1449, 1666
FauI CCCGC 2 cut(s) 72, 1801
Fnu4HI GCNGC 7 cut(s) 84, 87, 192, 291, 1815, 1833, 1994
FokI GGATG 4 cut(s) 368, 395, 407, 1046
FriOI GRGCYC 3 cut(s) 786, 1351, 1594
Fsp4HI GCNGC 7 cut(s) 84, 87, 192, 291, 1815, 1833, 1994
FspBI CTAG 7 cut(s) 324, 657, 936, 1272, 1406, 1529, 1556
GluI GCNGC 7 cut(s) 84, 87, 192, 291, 1815, 1833, 1994
GsaI CCCAGC 4 cut(s) 486, 1047, 1200, 1429
GsuI CTGGAG 2 cut(s) 1506, 1632
HaeIII GGCC 5 cut(s) 136, 290, 416, 784, 1689
HapII CCGG 4 cut(s) 137, 417, 525, 755
HgaI GACGC 1 cut(s) 832
Hin1I GRCGYC 1 cut(s) 824
HincII GTYRAC 2 cut(s) 862, 1249
HindII GTYRAC 2 cut(s) 862, 1249
HindIII AAGCTT 1 cut(s) 1163
HpaII CCGG 4 cut(s) 137, 417, 525, 755
HphI GGTGA 5 cut(s) 119, 329, 355, 374, 437
Hpy166II GTNNAC 3 cut(s) 862, 1249, 1526
Hpy188III TCNNGA 6 cut(s) 44, 284, 849, 993, 1611, 1887
Hpy8I GTNNAC 3 cut(s) 862, 1249, 1526
Hpy99I CGWCG 2 cut(s) 98, 212
HpyCH4III ACNGT 7 cut(s) 10, 38, 391, 846, 1216, 1362, 1858
HpyF10VI GCNNNNNNNGC 8 cut(s) 628, 1049, 1415, 1532, 1675, 1814, 1820, 1829
HpyF3I CTNAG 7 cut(s) 330, 925, 1053, 1266, 1329, 1593, 1749
Hsp92I GRCGYC 1 cut(s) 824
KpnI GGTACC 1 cut(s) 761
Kzo9I GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
LguI GCTCTTC 2 cut(s) 267, 1416
LmnI GCTCC 7 cut(s) 904, 1193, 1354, 1423, 1571, 1820, 2062
Lsp1109I GCAGC 4 cut(s) 203, 1801, 1819, 2005
LweI GCATC 3 cut(s) 962, 1024, 1329
MabI ACCWGGT 1 cut(s) 1790
MaeI CTAG 7 cut(s) 324, 657, 936, 1272, 1406, 1529, 1556
MaeIII GTNAC 2 cut(s) 362, 1294
MalI GATC 9 cut(s) 42, 61, 141, 180, 699, 997, 1013, 1456, 1638
MboI GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
MfeI CAATTG 1 cut(s) 1242
MflI RGATCY 2 cut(s) 995, 1454
MhlI GDGCHC 7 cut(s) 477, 786, 1351, 1528, 1555, 1576, 1594
MlsI TGGCCA 1 cut(s) 1689
MluCI AATT 8 cut(s) 215, 664, 880, 964, 1087, 1242, 1679, 1777
MluNI TGGCCA 1 cut(s) 1689
MlyI GAGTC 2 cut(s) 578, 917
MmeI TCCRAC 2 cut(s) 512, 1132
Mox20I TGGCCA 1 cut(s) 1689
Mph1103I ATGCAT 2 cut(s) 501, 1114
MroXI GAANNNNTTC 1 cut(s) 2046
MscI TGGCCA 1 cut(s) 1689
MseI TTAA 2 cut(s) 54, 1020
MslI CAYNNNNRTG 1 cut(s) 162
Msp20I TGGCCA 1 cut(s) 1689
MspA1I CMGCKG 2 cut(s) 194, 482
MspI CCGG 4 cut(s) 137, 417, 525, 755
MspR9I CCNGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
MunI CAATTG 1 cut(s) 1242
Mva1269I GAATGC 3 cut(s) 916, 1066, 1730
MvaI CCWGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
MwoI GCNNNNNNNGC 8 cut(s) 628, 1049, 1415, 1532, 1675, 1814, 1820, 1829
NdeII GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
NlaIV GGNNCC 7 cut(s) 150, 632, 759, 784, 997, 1400, 1906
NmuCI GTSAC 2 cut(s) 362, 1294
NsiI ATGCAT 2 cut(s) 501, 1114
NspI RCATGY 1 cut(s) 1043
NspV TTCGAA 1 cut(s) 1181
PaqCI CACCTGC 2 cut(s) 1420, 1666
PasI CCCWGGG 1 cut(s) 1697
PciSI GCTCTTC 2 cut(s) 267, 1416
PcsI WCGNNNNNNNCGW 1 cut(s) 538
PctI GAATGC 3 cut(s) 916, 1066, 1730
PdmI GAANNNNTTC 1 cut(s) 2046
PfeI GAWTC 9 cut(s) 170, 350, 409, 510, 917, 1139, 1178, 1186, 1505
PflFI GACNNNGTC 1 cut(s) 373
PflMI CCANNNNNTGG 4 cut(s) 1196, 1232, 1432, 1760
PfoI TCCNGGA 1 cut(s) 1189
PinAI ACCGGT 1 cut(s) 754
PkrI GCNGC 7 cut(s) 85, 88, 193, 292, 1816, 1834, 1995
Ple19I CGATCG 1 cut(s) 62
PleI GAGTC 2 cut(s) 577, 917
PpsI GAGTC 2 cut(s) 577, 917
Psp124BI GAGCTC 1 cut(s) 1351
Psp6I CCWGG 7 cut(s) 1189, 1444, 1483, 1648, 1696, 1735, 1790
PspFI CCCAGC 4 cut(s) 482, 1043, 1196, 1425
PspGI CCWGG 7 cut(s) 1189, 1444, 1483, 1648, 1696, 1735, 1790
PspN4I GGNNCC 7 cut(s) 150, 632, 759, 784, 997, 1400, 1906
PspOMI GGGCCC 1 cut(s) 782
PspPI GGNCC 3 cut(s) 782, 783, 1398
PstI CTGCAG 2 cut(s) 1504, 1819
PstNI CAGNNNCTG 3 cut(s) 920, 932, 1196
PsuI RGATCY 2 cut(s) 995, 1454
PsyI GACNNNGTC 1 cut(s) 373
PvuI CGATCG 1 cut(s) 62
PvuII CAGCTG 1 cut(s) 482
RsaI GTAC 4 cut(s) 32, 707, 759, 1218
RsaNI GTAC 4 cut(s) 31, 706, 758, 1217
RseI CAYNNNNRTG 1 cut(s) 162
SacI GAGCTC 1 cut(s) 1351
SapI GCTCTTC 2 cut(s) 267, 1416
SaqAI TTAA 2 cut(s) 54, 1020
SatI GCNGC 7 cut(s) 84, 87, 192, 291, 1815, 1833, 1994
Sau3AI GATC 9 cut(s) 40, 59, 139, 178, 697, 995, 1011, 1454, 1636
Sau96I GGNCC 3 cut(s) 782, 783, 1398
SchI GAGTC 2 cut(s) 578, 917
ScrFI CCNGG 7 cut(s) 1191, 1446, 1485, 1650, 1698, 1737, 1792
SduI GDGCHC 7 cut(s) 477, 786, 1351, 1528, 1555, 1576, 1594
SexAI ACCWGGT 1 cut(s) 1790
SfaNI GCATC 3 cut(s) 962, 1024, 1329
SfcI CTRYAG 3 cut(s) 711, 1500, 1815
SfuI TTCGAA 1 cut(s) 1181
SinI GGWCC 1 cut(s) 1398
SmiMI CAYNNNNRTG 1 cut(s) 162
SmlI CTYRAG 2 cut(s) 1458, 1909
SmoI CTYRAG 2 cut(s) 1458, 1909
SpeI ACTAGT 1 cut(s) 1528
Sse9I AATT 8 cut(s) 215, 664, 880, 964, 1087, 1242, 1679, 1777
SsiI CCGC 9 cut(s) 79, 83, 86, 194, 291, 341, 360, 1808, 1844
SspMI CTAG 7 cut(s) 324, 657, 936, 1272, 1406, 1529, 1556
SstI GAGCTC 1 cut(s) 1351
StyD4I CCNGG 7 cut(s) 1189, 1444, 1483, 1648, 1696, 1735, 1790
StyI CCWWGG 1 cut(s) 762
TaaI ACNGT 7 cut(s) 10, 38, 391, 846, 1216, 1362, 1858
TaqI TCGA 4 cut(s) 131, 908, 1181, 1315
TaqII GACCGA 2 cut(s) 522, 1386
TasI AATT 8 cut(s) 215, 664, 880, 964, 1087, 1242, 1679, 1777
TatI WGTACW 1 cut(s) 1216
TauI GCSGC 3 cut(s) 86, 89, 293
TfiI GAWTC 9 cut(s) 170, 350, 409, 510, 917, 1139, 1178, 1186, 1505
Tru1I TTAA 2 cut(s) 54, 1020
Tru9I TTAA 2 cut(s) 54, 1020
TscAI CASTG 6 cut(s) 43, 477, 1086, 1219, 1555, 2044
TseFI GTSAC 2 cut(s) 362, 1294
TseI GCWGC 4 cut(s) 191, 1814, 1832, 1993
Tsp45I GTSAC 2 cut(s) 362, 1294
TspDTI ATGAA 5 cut(s) 183, 474, 810, 1959, 2042
TspRI CASTG 6 cut(s) 43, 477, 1086, 1219, 1555, 2044
Tth111I GACNNNGTC 1 cut(s) 373
Van91I CCANNNNNTGG 4 cut(s) 1196, 1232, 1432, 1760
VneI GTGCAC 1 cut(s) 1524
VpaK11BI GGWCC 1 cut(s) 1398
XapI RAATTY 4 cut(s) 664, 964, 1087, 1777
XceI RCATGY 1 cut(s) 1043
XmnI GAANNNNTTC 1 cut(s) 2046
XspI CTAG 7 cut(s) 324, 657, 936, 1272, 1406, 1529, 1556
Zsp2I ATGCAT 2 cut(s) 501, 1114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.