Rroxscaffold_2G00107000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0005735
Physical Location & Seq
Forward (+)
30696834 .. 30702247
5414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00107000.1

Sequence Viewer

Length: 2067 bp
ATGGCTACGGTGGGGGAGGAAGATGTGGAGTACGAGAGTGATCCAGAGGAGGTTAAACGATCGCTGGCGATGAGGAGGCGGGCGGCGGCGAGCGACGATGAGGAAGGTGAAGGAGAGGGGAGGGAGAAATCGAGGCCGGATCGGAGGGCTCCCATTCACTCTGATGATGAATCGGACGATCAGGGTGGAGCAGCGGAGTATGACGACGACGAAGAATTGGTAGAAGACGAAGAGGAAGAAGAGATTGATGAGGAAGAAGAGGAGGAAGAAGAAGAGCCGTTTCATGAGGCCGCCTATGTGGAGAGAGGACGTGAAGGTGAGACTAAGACTGAGGTTTTGGCGGTGAAGGAATCGGAGGGCGGTGATGGGACGAGGTCTGTGGATGGAGCGGTGGATGAGCATGGAGAGAATCAGGCCGGAGAAGGTGAGGAGGAGGAGGAGAAGAAGGAGAATGAACCCTTTGCAGTGCCCACAGCTGGGGCGTTCTATATGCATGATGACCGATTCAGGGACAATGCCGGTGGTCGGAACAGGCGAACACATGGTGGAAGGAAGCTATGGGAGTCTAAAGATGACAGGAAGTGGGGGCATGACAAGTTTGAGGAGATAACTTTGCACGAAAGGCACCACGAAGAGGGCAGGAGACCTTCTAGGGGAAATTTTCGGGGTAGAGGAAGAAACCGAGGTATTGATCGTGGGTACGCTACGGGAAACAGGTCTAAAGAGTACGAGAATAATAATCAGAGACCGGTACCCAAGGGTGTGAGAGGGAGAGGGCCCAGAAGATATGAACCTGCTTTTAGGAATAACAGACAGACGCCTTCCACACAAAATAGACAGTCTGGAAAGCCTGTTGTCAAAACTTCACAAACTAATTCAGAGAGGACTTTTGCTCCCCCATCGAATGCAGAATCTGACTCAGTTCCTGCTAGGAAAAATGTCTTTGCATCAAGCCTGAATTCAGCTTCTCCTCCTTTTTATCCATCAGGATCCTCCAATAAGGAGATCAATCTAAATCAAAAAAGGGATGCACATGCTGGGAGTGCTAAGAGGAATGCTCGTCCATCTGTATCAGAGGAGAATTTTTCTGGGCGACATACCAATGCATATTTGCGAGGGAAGAATGTAGCTGAATCTGTTGGCGTTGGAATGGAAAAGCTTTATATTGATGATTTGAAGAATCCAGGAGCTGGGAAGACATTGACCACTGCACAAATGCCATCATCTGGGTCTTCAATTGTCAACGCTACTCAACCTTCTCAGTCTAGGGTTCAGGGAAGGGGTGCTGTCACAGGACAGATGAGTTATCGACCTGTCGTTTCTCAGAACCAGATGCCAAGAGCTCCATCACAACAGTTCCATGCTGTTCAGCGTAATCCCGTCCAAAATCGGTCCCAACTAGCTCTTCAAGCTCCTCCCCAGCAGGTGGGACAACGCCCTGGAAGTGGATCTCAAGCCTCCTCTCCACCTAAAACACCTGGAGAAGTTGACCCTGCAGATTCAAGTAAATCTAAAGGTGCACTAGTTGCAAAGGGAAAAGGCAGTGCTCAAGGTAATGGGAGGGGAGCACTTACTTACAATGGGGCTCAGGTTATTGGGGCCTCTGGAGGCATGGGTGTCAATCATGGAGATCAGAACTTTCCTGGGACTCCTGCCTTTTTGCCTGTTATGCAATTTGGTGGCCAGCACCCTGGGGGTATGGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCACAACTTGGTGGTGGTATGGGAAATTCTGAAATGACCTGGTTGCCTGTATTAGCGGGTGCTGCAGGAGCTTTAGGGGCTGCCTATTGTCCGCCCTATATTACTGTTGATGGTTCTTATCATGCTCGCCCGTCAGGACAGACATCTGTGGGTTCCTTGAGCAAAGAAAATAATGCAAACAAAACCAATAATGAATGGAAGCCTTCACAAAAGCCTGAAATAGTGGGCGATGATTACGGGCAGCGACAAAACAAGCCTCGTAGATATTCACAGATGAATGTCGCCAGTGAAGTTCTTCAAAATAATACAGAGCTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Btz

Protein Analysis

688

Amino Acids

74.67

Weight (kDa)

5.56

Isoelectric Point (pI)

57.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Btz PF09405 129 - 226 1.1e-19 CASC3/Barentsz eIF4AIII binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1414
Acc36I ACCTGC 2 cut(s) 802, 1414
Acc65I GGTACC 1 cut(s) 751
AccB1I GGYRCC 2 cut(s) 624, 751
AccB7I CCANNNNNTGG 4 cut(s) 1190, 1226, 1426, 1754
AccBSI CCGCTC 1 cut(s) 389
AclWI GGATC 5 cut(s) 35, 147, 984, 997, 1456
AcoI YGGCCR 1 cut(s) 1681
AcsI RAATTY 4 cut(s) 658, 958, 1081, 1771
AcyI GRCGYC 1 cut(s) 818
AdeI CACNNNGTG 1 cut(s) 545
AfaI GTAC 4 cut(s) 32, 701, 728, 753
AgeI ACCGGT 1 cut(s) 748
AgsI TTSAA 5 cut(s) 1177, 1236, 1409, 1503, 2045
AhlI ACTAGT 1 cut(s) 1522
AjiI CACGTC 1 cut(s) 311
AjnI CCWGG 7 cut(s) 1183, 1438, 1477, 1642, 1690, 1729, 1784
AjuI GAANNNNNNNTTGG 2 cut(s) 1389, 1421
Alw21I GWGCWC 4 cut(s) 1345, 1522, 1549, 1570
Alw26I GTCTC 3 cut(s) 314, 637, 739
Alw44I GTGCAC 1 cut(s) 1518
AlwI GGATC 5 cut(s) 35, 147, 984, 997, 1456
AlwNI CAGNNNCTG 3 cut(s) 914, 926, 1190
AoxI GGCC 6 cut(s) 134, 288, 414, 776, 1599, 1681
ApaI GGGCCC 1 cut(s) 780
ApaLI GTGCAC 1 cut(s) 1518
ApeKI GCWGC 4 cut(s) 191, 1808, 1826, 1987
ApoI RAATTY 4 cut(s) 658, 958, 1081, 1771
ArsI GACNNNNNNTTYG 2 cut(s) 319, 351
AsiGI ACCGGT 1 cut(s) 748
Asp700I GAANNNNTTC 1 cut(s) 2040
Asp718I GGTACC 1 cut(s) 751
AspS9I GGNCC 4 cut(s) 776, 777, 1392, 1599
AsuHPI GGTGA 5 cut(s) 119, 329, 355, 374, 437
AvaII GGWCC 1 cut(s) 1392
BaeGI GKGCMC 3 cut(s) 471, 780, 1522
BalI TGGCCA 1 cut(s) 1683
BamHI GGATCC 1 cut(s) 989
BanI GGYRCC 2 cut(s) 624, 751
BanII GRGCYC 4 cut(s) 151, 780, 1345, 1588
BbsI GAAGAC 3 cut(s) 231, 1202, 1224
Bbv12I GWGCWC 4 cut(s) 1345, 1522, 1549, 1570
BbvI GCAGC 4 cut(s) 203, 1795, 1813, 1999
BccI CCATC 8 cut(s) 359, 377, 907, 991, 1072, 1228, 1354, 1850
BceAI ACGGC 1 cut(s) 262
BciT130I CCWGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
BcoDI GTCTC 3 cut(s) 314, 637, 739
BcuI ACTAGT 1 cut(s) 1522
BfaI CTAG 5 cut(s) 651, 930, 1266, 1400, 1523
BfmI CTRYAG 2 cut(s) 1494, 1809
BfuAI ACCTGC 2 cut(s) 802, 1414
BisI GCNGC 7 cut(s) 84, 87, 192, 291, 1809, 1827, 1988
BlpI GCTNAGC 1 cut(s) 1743
BlsI GCNGC 7 cut(s) 85, 88, 193, 292, 1810, 1828, 1989
Bme1390I CCNGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
Bme18I GGWCC 1 cut(s) 1392
BmgBI CACGTC 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 776, 777, 1392, 1599
BmiI GGNNCC 8 cut(s) 150, 626, 753, 778, 991, 1394, 1600, 1900
BmrFI CCNGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
BmsI GCATC 3 cut(s) 956, 1018, 1323
BpiI GAAGAC 3 cut(s) 231, 1202, 1224
BplI GAGNNNNNCTC 2 cut(s) 1042, 1074
BpmI CTGGAG 2 cut(s) 1500, 1626
Bpu10I CCTNAGC 1 cut(s) 1587
Bpu1102I GCTNAGC 1 cut(s) 1743
BpuEI CTTGAG 3 cut(s) 1437, 1533, 1924
BsaHI GRCGYC 1 cut(s) 818
BsaI GGTCTC 2 cut(s) 637, 739
BsaJI CCNNGG 7 cut(s) 682, 756, 1438, 1643, 1690, 1691, 1729
BsaWI WCCGGW 1 cut(s) 748
BsaXI ACNNNNNCTCC 2 cut(s) 877, 907
Bse118I RCCGGY 2 cut(s) 518, 748
Bse1I ACTGG 1 cut(s) 2031
BseBI CCWGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
BseDI CCNNGG 7 cut(s) 682, 756, 1438, 1643, 1690, 1691, 1729
BseGI GGATG 3 cut(s) 388, 400, 1033
BseMII CTCAG 6 cut(s) 321, 933, 1274, 1337, 1601, 1757
BseNI ACTGG 1 cut(s) 2031
BseSI GKGCMC 3 cut(s) 471, 780, 1522
BseXI GCAGC 4 cut(s) 203, 1795, 1813, 1999
BseYI CCCAGC 4 cut(s) 476, 1037, 1190, 1419
BsgI GTGCAG 1 cut(s) 1194
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 6 cut(s) 136, 290, 416, 778, 1601, 1683
BshNI GGYRCC 2 cut(s) 624, 751
BshTI ACCGGT 1 cut(s) 748
BsiEI CGRYCG 1 cut(s) 62
BsiHKAI GWGCWC 4 cut(s) 1345, 1522, 1549, 1570
BsiSI CCGG 4 cut(s) 137, 417, 519, 749
BslFI GGGAC 5 cut(s) 382, 524, 1378, 1443, 1660
BsmAI GTCTC 3 cut(s) 314, 637, 739
BsmFI GGGAC 5 cut(s) 382, 524, 1378, 1443, 1660
BsmI GAATGC 3 cut(s) 910, 1060, 1724
BsnI GGCC 6 cut(s) 136, 290, 416, 778, 1601, 1683
Bso31I GGTCTC 2 cut(s) 637, 739
Bsp120I GGGCCC 1 cut(s) 776
Bsp1286I GDGCHC 8 cut(s) 151, 471, 780, 1345, 1522, 1549, 1570, 1588
Bsp143I GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
Bsp1720I GCTNAGC 1 cut(s) 1743
BspANI GGCC 6 cut(s) 136, 290, 416, 778, 1601, 1683
BspCNI CTCAG 6 cut(s) 322, 932, 1273, 1336, 1600, 1756
BspHI TCATGA 1 cut(s) 283
BspLI GGNNCC 8 cut(s) 150, 626, 753, 778, 991, 1394, 1600, 1900
BspMAI CTGCAG 2 cut(s) 1498, 1813
BspMI ACCTGC 2 cut(s) 802, 1414
BspPI GGATC 5 cut(s) 35, 147, 984, 997, 1456
BspQI GCTCTTC 2 cut(s) 267, 1410
BspT107I GGYRCC 2 cut(s) 624, 751
BspTNI GGTCTC 2 cut(s) 637, 739
BsrBI CCGCTC 1 cut(s) 389
BsrFI RCCGGY 2 cut(s) 518, 748
BsrI ACTGG 1 cut(s) 2031
BssAI RCCGGY 2 cut(s) 518, 748
BssECI CCNNGG 7 cut(s) 682, 756, 1438, 1643, 1690, 1691, 1729
BssMI GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
BssNI GRCGYC 1 cut(s) 818
BssT1I CCWWGG 1 cut(s) 756
Bst2UI CCWGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
Bst4CI ACNGT 4 cut(s) 10, 840, 1356, 1852
Bst6I CTCTTC 6 cut(s) 225, 234, 252, 267, 627, 1410
BstACI GRCGYC 1 cut(s) 818
BstAPI GCANNNNNTGC 1 cut(s) 1526
BstC8I GCNNGC 5 cut(s) 66, 81, 91, 1685, 1873
BstDEI CTNAG 8 cut(s) 324, 330, 919, 1047, 1260, 1323, 1587, 1743
BstF5I GGATG 3 cut(s) 388, 400, 1033
BstKTI GATC 9 cut(s) 43, 62, 142, 181, 694, 992, 1008, 1451, 1633
BstMAI GTCTC 3 cut(s) 314, 637, 739
BstMBI GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
BstMCI CGRYCG 1 cut(s) 62
BstMWI GCNNNNNNNGC 8 cut(s) 622, 1043, 1409, 1526, 1669, 1808, 1814, 1823
BstNI CCWGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
BstNSI RCATGY 1 cut(s) 1037
BstSCI CCNGG 7 cut(s) 1183, 1438, 1477, 1642, 1690, 1729, 1784
BstSFI CTRYAG 2 cut(s) 1494, 1809
BstSLI GKGCMC 3 cut(s) 471, 780, 1522
BstV1I GCAGC 4 cut(s) 203, 1795, 1813, 1999
BstV2I GAAGAC 3 cut(s) 231, 1202, 1224
BstX2I RGATCY 2 cut(s) 989, 1448
BstXI CCANNNNNNTGG 1 cut(s) 1691
BstYI RGATCY 2 cut(s) 989, 1448
BsuRI GGCC 6 cut(s) 136, 290, 416, 778, 1601, 1683
BtgZI GCGATG 2 cut(s) 83, 1989
BtrI CACGTC 1 cut(s) 311
BtsCI GGATG 3 cut(s) 388, 400, 1033
BtsI GCAGTG 3 cut(s) 471, 1206, 1549
BtsIMutI CAGTG 4 cut(s) 471, 1206, 1549, 2038
BveI ACCTGC 2 cut(s) 802, 1414
Cac8I GCNNGC 5 cut(s) 66, 81, 91, 1685, 1873
CaiI CAGNNNCTG 3 cut(s) 914, 926, 1190
CciI TCATGA 1 cut(s) 283
Cfr10I RCCGGY 2 cut(s) 518, 748
Cfr13I GGNCC 4 cut(s) 776, 777, 1392, 1599
CseI GACGC 1 cut(s) 826
CsiI ACCWGGT 1 cut(s) 1784
Csp6I GTAC 4 cut(s) 31, 700, 727, 752
CspAI ACCGGT 1 cut(s) 748
CspCI CAANNNNNGTGG 2 cut(s) 502, 537
CviQI GTAC 4 cut(s) 31, 700, 727, 752
DdeI CTNAG 8 cut(s) 324, 330, 919, 1047, 1260, 1323, 1587, 1743
DpnI GATC 9 cut(s) 42, 61, 141, 180, 693, 991, 1007, 1450, 1632
DpnII GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
DraIII CACNNNGTG 1 cut(s) 545
EaeI YGGCCR 1 cut(s) 1681
Eam1104I CTCTTC 6 cut(s) 225, 234, 252, 267, 627, 1410
EarI CTCTTC 6 cut(s) 225, 234, 252, 267, 627, 1410
EciI GGCGGA 1 cut(s) 1827
Ecl136II GAGCTC 1 cut(s) 1343
Eco130I CCWWGG 1 cut(s) 756
Eco24I GRGCYC 4 cut(s) 151, 780, 1345, 1588
Eco31I GGTCTC 2 cut(s) 637, 739
Eco47I GGWCC 1 cut(s) 1392
Eco53kI GAGCTC 1 cut(s) 1343
EcoICRI GAGCTC 1 cut(s) 1343
EcoO109I RGGNCCY 2 cut(s) 776, 1599
EcoRI GAATTC 1 cut(s) 958
EcoRII CCWGG 7 cut(s) 1183, 1438, 1477, 1642, 1690, 1729, 1784
EcoT14I CCWWGG 1 cut(s) 756
EcoT22I ATGCAT 2 cut(s) 495, 1108
EcoT38I GRGCYC 4 cut(s) 151, 780, 1345, 1588
ErhI CCWWGG 1 cut(s) 756
FaqI GGGAC 5 cut(s) 382, 524, 1378, 1443, 1660
FauI CCCGC 2 cut(s) 72, 1795
Fnu4HI GCNGC 7 cut(s) 84, 87, 192, 291, 1809, 1827, 1988
FokI GGATG 3 cut(s) 395, 407, 1040
FriOI GRGCYC 4 cut(s) 151, 780, 1345, 1588
Fsp4HI GCNGC 7 cut(s) 84, 87, 192, 291, 1809, 1827, 1988
FspBI CTAG 5 cut(s) 651, 930, 1266, 1400, 1523
GluI GCNGC 7 cut(s) 84, 87, 192, 291, 1809, 1827, 1988
GsaI CCCAGC 4 cut(s) 480, 1041, 1194, 1423
GsuI CTGGAG 2 cut(s) 1500, 1626
HaeIII GGCC 6 cut(s) 136, 290, 416, 778, 1601, 1683
HapII CCGG 4 cut(s) 137, 417, 519, 749
HgaI GACGC 1 cut(s) 826
Hin1I GRCGYC 1 cut(s) 818
HincII GTYRAC 2 cut(s) 1243, 1489
HindII GTYRAC 2 cut(s) 1243, 1489
HindIII AAGCTT 1 cut(s) 1157
HpaII CCGG 4 cut(s) 137, 417, 519, 749
HphI GGTGA 5 cut(s) 119, 329, 355, 374, 437
Hpy166II GTNNAC 3 cut(s) 1243, 1489, 1520
Hpy188III TCNNGA 6 cut(s) 44, 284, 843, 987, 1605, 1881
Hpy8I GTNNAC 3 cut(s) 1243, 1489, 1520
Hpy99I CGWCG 3 cut(s) 98, 209, 212
HpyCH4III ACNGT 4 cut(s) 10, 840, 1356, 1852
HpyCH4IV ACGT 1 cut(s) 310
HpyF10VI GCNNNNNNNGC 8 cut(s) 622, 1043, 1409, 1526, 1669, 1808, 1814, 1823
HpyF3I CTNAG 8 cut(s) 324, 330, 919, 1047, 1260, 1323, 1587, 1743
HpySE526I ACGT 1 cut(s) 310
Hsp92I GRCGYC 1 cut(s) 818
KpnI GGTACC 1 cut(s) 755
Kzo9I GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
LguI GCTCTTC 2 cut(s) 267, 1410
LmnI GCTCC 9 cut(s) 154, 188, 386, 898, 1187, 1348, 1417, 1565, 1814
Lsp1109I GCAGC 4 cut(s) 203, 1795, 1813, 1999
LweI GCATC 3 cut(s) 956, 1018, 1323
MabI ACCWGGT 1 cut(s) 1784
MaeI CTAG 5 cut(s) 651, 930, 1266, 1400, 1523
MaeII ACGT 1 cut(s) 310
MaeIII GTNAC 1 cut(s) 1288
MalI GATC 9 cut(s) 42, 61, 141, 180, 693, 991, 1007, 1450, 1632
MbiI CCGCTC 1 cut(s) 389
MboI GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
MfeI CAATTG 1 cut(s) 1236
MflI RGATCY 2 cut(s) 989, 1448
MhlI GDGCHC 8 cut(s) 151, 471, 780, 1345, 1522, 1549, 1570, 1588
MlsI TGGCCA 1 cut(s) 1683
MluCI AATT 8 cut(s) 215, 658, 874, 958, 1081, 1236, 1673, 1771
MluNI TGGCCA 1 cut(s) 1683
MlyI GAGTC 3 cut(s) 572, 911, 1642
MmeI TCCRAC 2 cut(s) 506, 1126
Mox20I TGGCCA 1 cut(s) 1683
Mph1103I ATGCAT 2 cut(s) 495, 1108
MroXI GAANNNNTTC 1 cut(s) 2040
MscI TGGCCA 1 cut(s) 1683
MseI TTAA 1 cut(s) 54
MslI CAYNNNNRTG 2 cut(s) 162, 1101
Msp20I TGGCCA 1 cut(s) 1683
MspA1I CMGCKG 2 cut(s) 194, 476
MspI CCGG 4 cut(s) 137, 417, 519, 749
MspR9I CCNGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
MunI CAATTG 1 cut(s) 1236
Mva1269I GAATGC 3 cut(s) 910, 1060, 1724
MvaI CCWGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
MwoI GCNNNNNNNGC 8 cut(s) 622, 1043, 1409, 1526, 1669, 1808, 1814, 1823
NdeII GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
NlaIV GGNNCC 8 cut(s) 150, 626, 753, 778, 991, 1394, 1600, 1900
NmuCI GTSAC 1 cut(s) 1288
NsiI ATGCAT 2 cut(s) 495, 1108
NspI RCATGY 1 cut(s) 1037
PagI TCATGA 1 cut(s) 283
PaqCI CACCTGC 1 cut(s) 1414
PasI CCCWGGG 1 cut(s) 1691
PciSI GCTCTTC 2 cut(s) 267, 1410
PcsI WCGNNNNNNNCGW 1 cut(s) 532
PctI GAATGC 3 cut(s) 910, 1060, 1724
PdmI GAANNNNTTC 1 cut(s) 2040
PfeI GAWTC 8 cut(s) 170, 350, 409, 504, 911, 1133, 1180, 1499
PflFI GACNNNGTC 1 cut(s) 373
PflMI CCANNNNNTGG 4 cut(s) 1190, 1226, 1426, 1754
PfoI TCCNGGA 1 cut(s) 1183
PinAI ACCGGT 1 cut(s) 748
PkrI GCNGC 7 cut(s) 85, 88, 193, 292, 1810, 1828, 1989
Ple19I CGATCG 1 cut(s) 62
PleI GAGTC 3 cut(s) 571, 911, 1642
PpsI GAGTC 3 cut(s) 571, 911, 1642
Psp124BI GAGCTC 1 cut(s) 1345
Psp6I CCWGG 7 cut(s) 1183, 1438, 1477, 1642, 1690, 1729, 1784
PspFI CCCAGC 4 cut(s) 476, 1037, 1190, 1419
PspGI CCWGG 7 cut(s) 1183, 1438, 1477, 1642, 1690, 1729, 1784
PspN4I GGNNCC 8 cut(s) 150, 626, 753, 778, 991, 1394, 1600, 1900
PspOMI GGGCCC 1 cut(s) 776
PspPI GGNCC 4 cut(s) 776, 777, 1392, 1599
PstI CTGCAG 2 cut(s) 1498, 1813
PstNI CAGNNNCTG 3 cut(s) 914, 926, 1190
PsuI RGATCY 2 cut(s) 989, 1448
PsyI GACNNNGTC 1 cut(s) 373
PvuI CGATCG 1 cut(s) 62
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 4 cut(s) 32, 701, 728, 753
RsaNI GTAC 4 cut(s) 31, 700, 727, 752
RseI CAYNNNNRTG 2 cut(s) 162, 1101
SacI GAGCTC 1 cut(s) 1345
SapI GCTCTTC 2 cut(s) 267, 1410
SaqAI TTAA 1 cut(s) 54
SatI GCNGC 7 cut(s) 84, 87, 192, 291, 1809, 1827, 1988
Sau3AI GATC 9 cut(s) 40, 59, 139, 178, 691, 989, 1005, 1448, 1630
Sau96I GGNCC 4 cut(s) 776, 777, 1392, 1599
SchI GAGTC 3 cut(s) 572, 911, 1642
ScrFI CCNGG 7 cut(s) 1185, 1440, 1479, 1644, 1692, 1731, 1786
SduI GDGCHC 8 cut(s) 151, 471, 780, 1345, 1522, 1549, 1570, 1588
SexAI ACCWGGT 1 cut(s) 1784
SfaNI GCATC 3 cut(s) 956, 1018, 1323
SfcI CTRYAG 2 cut(s) 1494, 1809
SinI GGWCC 1 cut(s) 1392
SmiMI CAYNNNNRTG 2 cut(s) 162, 1101
SmlI CTYRAG 3 cut(s) 1452, 1548, 1903
SmoI CTYRAG 3 cut(s) 1452, 1548, 1903
SpeI ACTAGT 1 cut(s) 1522
Sse9I AATT 8 cut(s) 215, 658, 874, 958, 1081, 1236, 1673, 1771
SspMI CTAG 5 cut(s) 651, 930, 1266, 1400, 1523
SstI GAGCTC 1 cut(s) 1345
StyD4I CCNGG 7 cut(s) 1183, 1438, 1477, 1642, 1690, 1729, 1784
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 4 cut(s) 10, 840, 1356, 1852
TaiI ACGT 1 cut(s) 313
TaqI TCGA 3 cut(s) 131, 902, 1309
TaqII GACCGA 2 cut(s) 516, 1380
TasI AATT 8 cut(s) 215, 658, 874, 958, 1081, 1236, 1673, 1771
TauI GCSGC 3 cut(s) 86, 89, 293
TfiI GAWTC 8 cut(s) 170, 350, 409, 504, 911, 1133, 1180, 1499
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TscAI CASTG 4 cut(s) 471, 1213, 1549, 2038
TseFI GTSAC 1 cut(s) 1288
TseI GCWGC 4 cut(s) 191, 1808, 1826, 1987
Tsp45I GTSAC 1 cut(s) 1288
TspDTI ATGAA 6 cut(s) 183, 272, 468, 804, 1953, 2036
TspRI CASTG 4 cut(s) 471, 1213, 1549, 2038
Tth111I GACNNNGTC 1 cut(s) 373
Van91I CCANNNNNTGG 4 cut(s) 1190, 1226, 1426, 1754
VneI GTGCAC 1 cut(s) 1518
VpaK11BI GGWCC 1 cut(s) 1392
XapI RAATTY 4 cut(s) 658, 958, 1081, 1771
XceI RCATGY 1 cut(s) 1037
XmnI GAANNNNTTC 1 cut(s) 2040
XspI CTAG 5 cut(s) 651, 930, 1266, 1400, 1523
Zsp2I ATGCAT 2 cut(s) 495, 1108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.