isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15280 AT1G15280 AT1G80000 AT1G80000 AT1G80000 AT1G80000 |
| fragaria_vesca | FvH4_6g30960 FvH4_6g30960 FvH4_6g30960 |
| malus_domestica | MD00G1201000.v1.1 MD09G1214900.v1.1 MD17G1197300.v1.1 MD17G1197400.v1.1 |
| prunus_persica | Prupe.3G073300_v2.0.a1 Prupe.3G073300_v2.0.a1 |
| pyrus_communis | pycom09g13170 pycom17g20230 |
| rosa_chinensis | RchiOBHm_Chr2g0137581 |
| rosa_laevigata | RLG00000019663 |
| rosa_multiflora | Rmu_co8200514.1_g000001 Rmu_sc0000765.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00107000 |
| rosa_rugosa | Rorug02G0343500 |
| rosa_samantha | Rh2AG391200 Rh2BG398700 Rh2CG378200 Rh2DG413800 |
| rosa_wichuraiana | Rw2G032040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 458 |
| Acc36I | ACCTGC | 1 cut(s) | 458 |
| AccB1I | GGYRCC | 1 cut(s) | 1531 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1178, 1772 |
| AccII | CGCG | 1 cut(s) | 663 |
| AccIII | TCCGGA | 1 cut(s) | 43 |
| AclWI | GGATC | 4 cut(s) | 35, 134, 147, 1443 |
| AcoI | YGGCCR | 2 cut(s) | 1699, 2064 |
| AcsI | RAATTY | 4 cut(s) | 946, 1476, 1786, 1939 |
| AcuI | CTGAAG | 1 cut(s) | 1493 |
| AdeI | CACNNNGTG | 1 cut(s) | 536 |
| AfaI | GTAC | 5 cut(s) | 197, 694, 1026, 1662, 2076 |
| AjnI | CCWGG | 7 cut(s) | 767, 1276, 1425, 1535, 1656, 1677, 1747 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1239, 1271 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 865, 897, 1589, 1621 |
| Alw21I | GWGCWC | 1 cut(s) | 1602 |
| Alw26I | GTCTC | 2 cut(s) | 311, 1308 |
| AlwI | GGATC | 4 cut(s) | 35, 134, 147, 1443 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1178 |
| Aor13HI | TCCGGA | 1 cut(s) | 43 |
| AoxI | GGCC | 5 cut(s) | 147, 764, 836, 1699, 2064 |
| ApaI | GGGCCC | 1 cut(s) | 768 |
| ApeKI | GCWGC | 5 cut(s) | 83, 303, 1175, 1826, 2023 |
| ApoI | RAATTY | 4 cut(s) | 946, 1476, 1786, 1939 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 896, 928 |
| AseI | ATTAAT | 1 cut(s) | 1155 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2076 |
| AspLEI | GCGC | 1 cut(s) | 1359 |
| AspS9I | GGNCC | 6 cut(s) | 147, 387, 647, 764, 765, 1612 |
| AsuHPI | GGTGA | 6 cut(s) | 26, 119, 130, 374, 1200, 1496 |
| AvaII | GGWCC | 3 cut(s) | 387, 647, 1612 |
| BaeGI | GKGCMC | 4 cut(s) | 582, 768, 1089, 1536 |
| BalI | TGGCCA | 2 cut(s) | 1701, 2066 |
| BamHI | GGATCC | 1 cut(s) | 139 |
| BanI | GGYRCC | 1 cut(s) | 1531 |
| BanII | GRGCYC | 2 cut(s) | 768, 1602 |
| BbsI | GAAGAC | 2 cut(s) | 1050, 1190 |
| Bbv12I | GWGCWC | 1 cut(s) | 1602 |
| BbvI | GCAGC | 5 cut(s) | 95, 315, 1162, 1813, 2035 |
| BccI | CCATC | 7 cut(s) | 359, 389, 979, 1339, 1407, 1868, 1903 |
| BceAI | ACGGC | 2 cut(s) | 134, 291 |
| BciT130I | CCWGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| BciVI | GTATCC | 1 cut(s) | 751 |
| BclI | TGATCA | 1 cut(s) | 175 |
| BcoDI | GTCTC | 2 cut(s) | 311, 1308 |
| BfaI | CTAG | 2 cut(s) | 215, 1251 |
| BfmI | CTRYAG | 2 cut(s) | 734, 1827 |
| BfuAI | ACCTGC | 1 cut(s) | 458 |
| BfuI | GTATCC | 1 cut(s) | 751 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 312 |
| BisI | GCNGC | 7 cut(s) | 84, 87, 189, 304, 1176, 1827, 2024 |
| BlpI | GCTNAGC | 2 cut(s) | 1406, 1761 |
| BlsI | GCNGC | 7 cut(s) | 85, 88, 190, 305, 1177, 1828, 2025 |
| BmcAI | AGTACT | 1 cut(s) | 2076 |
| Bme1390I | CCNGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| Bme18I | GGWCC | 3 cut(s) | 387, 647, 1612 |
| BmgT120I | GGNCC | 6 cut(s) | 147, 387, 647, 764, 765, 1612 |
| BmiI | GGNNCC | 8 cut(s) | 141, 388, 648, 766, 1533, 1613, 1614, 1921 |
| BmrFI | CCNGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| BmrI | ACTGGG | 2 cut(s) | 1628, 1719 |
| BmsI | GCATC | 2 cut(s) | 13, 60 |
| BmuI | ACTGGG | 2 cut(s) | 1628, 1719 |
| BpiI | GAAGAC | 2 cut(s) | 1050, 1190 |
| BpmI | CTGGAG | 1 cut(s) | 1649 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1406, 1761 |
| BpuEI | CTTGAG | 5 cut(s) | 922, 1221, 1424, 1511, 1945 |
| Bsa29I | ATCGAT | 2 cut(s) | 1375, 1379 |
| BsaAI | YACGTR | 1 cut(s) | 1589 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1634 |
| BsaWI | WCCGGW | 2 cut(s) | 43, 1602 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 865, 895, 1225, 1255, 1589, 1619 |
| Bse1I | ACTGG | 6 cut(s) | 984, 1298, 1391, 1623, 1714, 2067 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1634 |
| BseAI | TCCGGA | 1 cut(s) | 43 |
| BseBI | CCWGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| BseCI | ATCGAT | 2 cut(s) | 1375, 1379 |
| BseGI | GGATG | 6 cut(s) | 28, 178, 226, 400, 1027, 1635 |
| BseJI | GATNNNNATC | 1 cut(s) | 1634 |
| BseMII | CTCAG | 4 cut(s) | 183, 1319, 1420, 1775 |
| BseNI | ACTGG | 6 cut(s) | 984, 1298, 1391, 1623, 1714, 2067 |
| BseRI | GAGGAG | 6 cut(s) | 32, 91, 128, 272, 443, 948 |
| BseSI | GKGCMC | 4 cut(s) | 582, 768, 1089, 1536 |
| BseXI | GCAGC | 5 cut(s) | 95, 315, 1162, 1813, 2035 |
| BseYI | CCCAGC | 2 cut(s) | 917, 1178 |
| Bsh1236I | CGCG | 1 cut(s) | 663 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1379 |
| BshFI | GGCC | 5 cut(s) | 149, 766, 838, 1701, 2066 |
| BshNI | GGYRCC | 1 cut(s) | 1531 |
| BshVI | ATCGAT | 2 cut(s) | 1375, 1379 |
| BsiEI | CGRYCG | 1 cut(s) | 1379 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1602 |
| BsiSI | CCGG | 2 cut(s) | 44, 1603 |
| BslFI | GGGAC | 3 cut(s) | 515, 1430, 1625 |
| BsmAI | GTCTC | 2 cut(s) | 311, 1308 |
| BsmFI | GGGAC | 3 cut(s) | 515, 1430, 1625 |
| BsmI | GAATGC | 1 cut(s) | 1742 |
| BsnI | GGCC | 5 cut(s) | 149, 766, 838, 1701, 2066 |
| Bsp120I | GGGCCC | 1 cut(s) | 764 |
| Bsp1286I | GDGCHC | 5 cut(s) | 582, 768, 1089, 1536, 1602 |
| Bsp13I | TCCGGA | 1 cut(s) | 43 |
| Bsp1407I | TGTACA | 1 cut(s) | 1024 |
| Bsp143I | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1406, 1761 |
| BspANI | GGCC | 5 cut(s) | 149, 766, 838, 1701, 2066 |
| BspCNI | CTCAG | 4 cut(s) | 184, 1318, 1419, 1774 |
| BspDI | ATCGAT | 2 cut(s) | 1375, 1379 |
| BspEI | TCCGGA | 1 cut(s) | 43 |
| BspFNI | CGCG | 1 cut(s) | 663 |
| BspLI | GGNNCC | 8 cut(s) | 141, 388, 648, 766, 1533, 1613, 1614, 1921 |
| BspMAI | CTGCAG | 1 cut(s) | 1831 |
| BspMI | ACCTGC | 1 cut(s) | 458 |
| BspPI | GGATC | 4 cut(s) | 35, 134, 147, 1443 |
| BspT107I | GGYRCC | 1 cut(s) | 1531 |
| BsrGI | TGTACA | 1 cut(s) | 1024 |
| BsrI | ACTGG | 6 cut(s) | 984, 1298, 1391, 1623, 1714, 2067 |
| BssMI | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| BssT1I | CCWWGG | 3 cut(s) | 131, 143, 744 |
| Bst2UI | CCWGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| Bst4CI | ACNGT | 5 cut(s) | 38, 494, 783, 1029, 1870 |
| Bst6I | CTCTTC | 8 cut(s) | 105, 225, 243, 270, 588, 618, 1109, 1569 |
| BstAUI | TGTACA | 1 cut(s) | 1024 |
| BstBAI | YACGTR | 1 cut(s) | 1589 |
| BstC8I | GCNNGC | 5 cut(s) | 91, 840, 1397, 1703, 1891 |
| BstDEI | CTNAG | 4 cut(s) | 192, 1305, 1406, 1761 |
| BstDSI | CCRYGG | 2 cut(s) | 150, 390 |
| BstEII | GGTNACC | 1 cut(s) | 1806 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 654 |
| BstF5I | GGATG | 6 cut(s) | 28, 178, 226, 400, 1027, 1635 |
| BstFNI | CGCG | 1 cut(s) | 663 |
| BstHHI | GCGC | 1 cut(s) | 1359 |
| BstKTI | GATC | 8 cut(s) | 43, 62, 142, 178, 685, 1379, 1383, 1438 |
| BstMAI | GTCTC | 2 cut(s) | 311, 1308 |
| BstMBI | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| BstMCI | CGRYCG | 1 cut(s) | 1379 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 312, 613, 1396, 1540, 1826, 1832, 1841 |
| BstNI | CCWGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| BstPI | GGTNACC | 1 cut(s) | 1806 |
| BstSCI | CCNGG | 7 cut(s) | 767, 1276, 1425, 1535, 1656, 1677, 1747 |
| BstSFI | CTRYAG | 2 cut(s) | 734, 1827 |
| BstSLI | GKGCMC | 4 cut(s) | 582, 768, 1089, 1536 |
| BstSNI | TACGTA | 1 cut(s) | 1589 |
| BstUI | CGCG | 1 cut(s) | 663 |
| BstV1I | GCAGC | 5 cut(s) | 95, 315, 1162, 1813, 2035 |
| BstV2I | GAAGAC | 2 cut(s) | 1050, 1190 |
| BstX2I | RGATCY | 2 cut(s) | 139, 1435 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1102, 1709 |
| BstYI | RGATCY | 2 cut(s) | 139, 1435 |
| Bsu15I | ATCGAT | 2 cut(s) | 1375, 1379 |
| BsuI | GTATCC | 1 cut(s) | 751 |
| BsuRI | GGCC | 5 cut(s) | 149, 766, 838, 1701, 2066 |
| BsuTUI | ATCGAT | 2 cut(s) | 1375, 1379 |
| BtgI | CCRYGG | 2 cut(s) | 150, 390 |
| BtgZI | GCGATG | 2 cut(s) | 83, 108 |
| BtsCI | GGATG | 6 cut(s) | 28, 178, 226, 400, 1027, 1635 |
| BtsI | GCAGTG | 2 cut(s) | 462, 1563 |
| BtsIMutI | CAGTG | 6 cut(s) | 43, 462, 1305, 1563, 1616, 2074 |
| BveI | ACCTGC | 1 cut(s) | 458 |
| Cac8I | GCNNGC | 5 cut(s) | 91, 840, 1397, 1703, 1891 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1178 |
| CfoI | GCGC | 1 cut(s) | 1359 |
| Cfr13I | GGNCC | 6 cut(s) | 147, 387, 647, 764, 765, 1612 |
| ClaI | ATCGAT | 2 cut(s) | 1375, 1379 |
| Csp6I | GTAC | 5 cut(s) | 196, 693, 1025, 1661, 2075 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 132, 167, 493, 528 |
| CviQI | GTAC | 5 cut(s) | 196, 693, 1025, 1661, 2075 |
| DdeI | CTNAG | 4 cut(s) | 192, 1305, 1406, 1761 |
| DpnI | GATC | 8 cut(s) | 42, 61, 141, 177, 684, 1378, 1382, 1437 |
| DpnII | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| DraIII | CACNNNGTG | 1 cut(s) | 536 |
| EaeI | YGGCCR | 2 cut(s) | 1699, 2064 |
| Eam1104I | CTCTTC | 8 cut(s) | 105, 225, 243, 270, 588, 618, 1109, 1569 |
| EarI | CTCTTC | 8 cut(s) | 105, 225, 243, 270, 588, 618, 1109, 1569 |
| EciI | GGCGGA | 3 cut(s) | 385, 1442, 1610 |
| Ecl136II | GAGCTC | 1 cut(s) | 1600 |
| Eco105I | TACGTA | 1 cut(s) | 1589 |
| Eco130I | CCWWGG | 3 cut(s) | 131, 143, 744 |
| Eco147I | AGGCCT | 1 cut(s) | 838 |
| Eco24I | GRGCYC | 2 cut(s) | 768, 1602 |
| Eco32I | GATATC | 1 cut(s) | 293 |
| Eco47I | GGWCC | 3 cut(s) | 387, 647, 1612 |
| Eco53kI | GAGCTC | 1 cut(s) | 1600 |
| Eco57I | CTGAAG | 1 cut(s) | 1493 |
| Eco91I | GGTNACC | 1 cut(s) | 1806 |
| EcoICRI | GAGCTC | 1 cut(s) | 1600 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 654 |
| EcoO109I | RGGNCCY | 3 cut(s) | 647, 764, 1612 |
| EcoO65I | GGTNACC | 1 cut(s) | 1806 |
| EcoRI | GAATTC | 1 cut(s) | 946 |
| EcoRII | CCWGG | 7 cut(s) | 767, 1276, 1425, 1535, 1656, 1677, 1747 |
| EcoRV | GATATC | 1 cut(s) | 293 |
| EcoT14I | CCWWGG | 3 cut(s) | 131, 143, 744 |
| EcoT22I | ATGCAT | 2 cut(s) | 486, 1102 |
| EcoT38I | GRGCYC | 2 cut(s) | 768, 1602 |
| ErhI | CCWWGG | 3 cut(s) | 131, 143, 744 |
| FaqI | GGGAC | 3 cut(s) | 515, 1430, 1625 |
| FauI | CCCGC | 4 cut(s) | 1011, 1062, 1813, 1999 |
| FbaI | TGATCA | 1 cut(s) | 175 |
| Fnu4HI | GCNGC | 7 cut(s) | 84, 87, 189, 304, 1176, 1827, 2024 |
| FokI | GGATG | 6 cut(s) | 35, 185, 233, 407, 1034, 1642 |
| FriOI | GRGCYC | 2 cut(s) | 768, 1602 |
| Fsp4HI | GCNGC | 7 cut(s) | 84, 87, 189, 304, 1176, 1827, 2024 |
| FspBI | CTAG | 2 cut(s) | 215, 1251 |
| GlaI | GCGC | 1 cut(s) | 1358 |
| GluI | GCNGC | 7 cut(s) | 84, 87, 189, 304, 1176, 1827, 2024 |
| GsaI | CCCAGC | 2 cut(s) | 921, 1182 |
| GsuI | CTGGAG | 1 cut(s) | 1649 |
| HaeIII | GGCC | 5 cut(s) | 149, 766, 838, 1701, 2066 |
| HapII | CCGG | 2 cut(s) | 44, 1603 |
| HhaI | GCGC | 1 cut(s) | 1359 |
| Hin6I | GCGC | 1 cut(s) | 1357 |
| HinP1I | GCGC | 1 cut(s) | 1357 |
| HindIII | AAGCTT | 3 cut(s) | 940, 1145, 1442 |
| HinfI | GANTC | 6 cut(s) | 167, 554, 1127, 1160, 1501, 1513 |
| HpaII | CCGG | 2 cut(s) | 44, 1603 |
| HphI | GGTGA | 6 cut(s) | 26, 119, 130, 374, 1200, 1496 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 7 cut(s) | 163, 172, 868, 904, 1308, 1491, 1512 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 296, 1899 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| HpyCH4III | ACNGT | 5 cut(s) | 38, 494, 783, 1029, 1870 |
| HpyCH4IV | ACGT | 1 cut(s) | 1588 |
| HpyCH4V | TGCA | 9 cut(s) | 455, 473, 484, 607, 896, 1100, 1395, 1690, 1829 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 312, 613, 1396, 1540, 1826, 1832, 1841 |
| HpyF3I | CTNAG | 4 cut(s) | 192, 1305, 1406, 1761 |
| HpySE526I | ACGT | 1 cut(s) | 1588 |
| HspAI | GCGC | 1 cut(s) | 1357 |
| KflI | GGGWCCC | 1 cut(s) | 1612 |
| Kpn2I | TCCGGA | 1 cut(s) | 43 |
| Ksp22I | TGATCA | 1 cut(s) | 175 |
| Kzo9I | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| LmnI | GCTCC | 5 cut(s) | 1246, 1404, 1597, 1605, 1832 |
| Lsp1109I | GCAGC | 5 cut(s) | 95, 315, 1162, 1813, 2035 |
| LweI | GCATC | 2 cut(s) | 13, 60 |
| MaeI | CTAG | 2 cut(s) | 215, 1251 |
| MaeII | ACGT | 1 cut(s) | 1588 |
| MaeIII | GTNAC | 2 cut(s) | 1206, 1806 |
| MalI | GATC | 8 cut(s) | 42, 61, 141, 177, 684, 1378, 1382, 1437 |
| MboI | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| MflI | RGATCY | 2 cut(s) | 139, 1435 |
| MhlI | GDGCHC | 5 cut(s) | 582, 768, 1089, 1536, 1602 |
| MlsI | TGGCCA | 2 cut(s) | 1701, 2066 |
| MluCI | AATT | 7 cut(s) | 505, 862, 946, 1476, 1691, 1786, 1939 |
| MluNI | TGGCCA | 2 cut(s) | 1701, 2066 |
| MlyI | GAGTC | 2 cut(s) | 563, 1154 |
| Mox20I | TGGCCA | 2 cut(s) | 1701, 2066 |
| Mph1103I | ATGCAT | 2 cut(s) | 486, 1102 |
| MroI | TCCGGA | 1 cut(s) | 43 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2076 |
| MscI | TGGCCA | 2 cut(s) | 1701, 2066 |
| MseI | TTAA | 4 cut(s) | 348, 1155, 1634, 1649 |
| MslI | CAYNNNNRTG | 3 cut(s) | 162, 1202, 1344 |
| Msp20I | TGGCCA | 2 cut(s) | 1701, 2066 |
| MspA1I | CMGCKG | 2 cut(s) | 86, 1175 |
| MspI | CCGG | 2 cut(s) | 44, 1603 |
| MspR9I | CCNGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| Mva1269I | GAATGC | 1 cut(s) | 1742 |
| MvaI | CCWGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| MvnI | CGCG | 1 cut(s) | 663 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 312, 613, 1396, 1540, 1826, 1832, 1841 |
| NdeII | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| NlaIV | GGNNCC | 8 cut(s) | 141, 388, 648, 766, 1533, 1613, 1614, 1921 |
| NmeAIII | GCCGAG | 1 cut(s) | 868 |
| NmuCI | GTSAC | 1 cut(s) | 1206 |
| NsiI | ATGCAT | 2 cut(s) | 486, 1102 |
| PaqCI | CACCTGC | 1 cut(s) | 458 |
| PceI | AGGCCT | 1 cut(s) | 838 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 204, 523 |
| PctI | GAATGC | 1 cut(s) | 1742 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2076 |
| PfeI | GAWTC | 4 cut(s) | 167, 1127, 1501, 1513 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1178, 1772 |
| PkrI | GCNGC | 7 cut(s) | 85, 88, 190, 305, 1177, 1828, 2025 |
| Ple19I | CGATCG | 1 cut(s) | 1379 |
| PleI | GAGTC | 2 cut(s) | 562, 1154 |
| PpsI | GAGTC | 2 cut(s) | 562, 1154 |
| Ppu21I | YACGTR | 1 cut(s) | 1589 |
| PpuMI | RGGWCCY | 2 cut(s) | 647, 1612 |
| PshBI | ATTAAT | 1 cut(s) | 1155 |
| Psp124BI | GAGCTC | 1 cut(s) | 1602 |
| Psp5II | RGGWCCY | 2 cut(s) | 647, 1612 |
| Psp6I | CCWGG | 7 cut(s) | 767, 1276, 1425, 1535, 1656, 1677, 1747 |
| PspEI | GGTNACC | 1 cut(s) | 1806 |
| PspFI | CCCAGC | 2 cut(s) | 917, 1178 |
| PspGI | CCWGG | 7 cut(s) | 767, 1276, 1425, 1535, 1656, 1677, 1747 |
| PspN4I | GGNNCC | 8 cut(s) | 141, 388, 648, 766, 1533, 1613, 1614, 1921 |
| PspOMI | GGGCCC | 1 cut(s) | 764 |
| PspPI | GGNCC | 6 cut(s) | 147, 387, 647, 764, 765, 1612 |
| PspPPI | RGGWCCY | 2 cut(s) | 647, 1612 |
| PstI | CTGCAG | 1 cut(s) | 1831 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1178 |
| PsuI | RGATCY | 2 cut(s) | 139, 1435 |
| PvuI | CGATCG | 1 cut(s) | 1379 |
| PvuII | CAGCTG | 1 cut(s) | 1175 |
| RsaI | GTAC | 5 cut(s) | 197, 694, 1026, 1662, 2076 |
| RsaNI | GTAC | 5 cut(s) | 196, 693, 1025, 1661, 2075 |
| RseI | CAYNNNNRTG | 3 cut(s) | 162, 1202, 1344 |
| SacI | GAGCTC | 1 cut(s) | 1602 |
| SaqAI | TTAA | 4 cut(s) | 348, 1155, 1634, 1649 |
| SatI | GCNGC | 7 cut(s) | 84, 87, 189, 304, 1176, 1827, 2024 |
| Sau3AI | GATC | 8 cut(s) | 40, 59, 139, 175, 682, 1376, 1380, 1435 |
| Sau96I | GGNCC | 6 cut(s) | 147, 387, 647, 764, 765, 1612 |
| ScaI | AGTACT | 1 cut(s) | 2076 |
| SchI | GAGTC | 2 cut(s) | 563, 1154 |
| ScrFI | CCNGG | 7 cut(s) | 769, 1278, 1427, 1537, 1658, 1679, 1749 |
| SduI | GDGCHC | 5 cut(s) | 582, 768, 1089, 1536, 1602 |
| SfaNI | GCATC | 2 cut(s) | 13, 60 |
| SfcI | CTRYAG | 2 cut(s) | 734, 1827 |
| SinI | GGWCC | 3 cut(s) | 387, 647, 1612 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 162, 1202, 1344 |
| SmlI | CTYRAG | 5 cut(s) | 937, 1236, 1439, 1526, 1924 |
| SmoI | CTYRAG | 5 cut(s) | 937, 1236, 1439, 1526, 1924 |
| SnaBI | TACGTA | 1 cut(s) | 1589 |
| Sse9I | AATT | 7 cut(s) | 505, 862, 946, 1476, 1691, 1786, 1939 |
| SseBI | AGGCCT | 1 cut(s) | 838 |
| SspMI | CTAG | 2 cut(s) | 215, 1251 |
| SstI | GAGCTC | 1 cut(s) | 1602 |
| StuI | AGGCCT | 1 cut(s) | 838 |
| StyD4I | CCNGG | 7 cut(s) | 767, 1276, 1425, 1535, 1656, 1677, 1747 |
| StyI | CCWWGG | 3 cut(s) | 131, 143, 744 |
| TaaI | ACNGT | 5 cut(s) | 38, 494, 783, 1029, 1870 |
| TaiI | ACGT | 1 cut(s) | 1591 |
| TaqI | TCGA | 3 cut(s) | 417, 1375, 1379 |
| TaqII | GACCGA | 1 cut(s) | 1044 |
| TasI | AATT | 7 cut(s) | 505, 862, 946, 1476, 1691, 1786, 1939 |
| TatI | WGTACW | 2 cut(s) | 1024, 2074 |
| TauI | GCSGC | 2 cut(s) | 89, 191 |
| TfiI | GAWTC | 4 cut(s) | 167, 1127, 1501, 1513 |
| Tru1I | TTAA | 4 cut(s) | 348, 1155, 1634, 1649 |
| Tru9I | TTAA | 4 cut(s) | 348, 1155, 1634, 1649 |
| TscAI | CASTG | 6 cut(s) | 43, 462, 1305, 1563, 1623, 2074 |
| TseFI | GTSAC | 1 cut(s) | 1206 |
| TseI | GCWGC | 5 cut(s) | 83, 303, 1175, 1826, 2023 |
| Tsp45I | GTSAC | 1 cut(s) | 1206 |
| TspDTI | ATGAA | 7 cut(s) | 180, 237, 255, 579, 792, 2028, 2072 |
| TspGWI | ACGGA | 1 cut(s) | 379 |
| TspRI | CASTG | 6 cut(s) | 43, 462, 1305, 1563, 1623, 2074 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1178, 1772 |
| VpaK11BI | GGWCC | 3 cut(s) | 387, 647, 1612 |
| VspI | ATTAAT | 1 cut(s) | 1155 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 654 |
| XapI | RAATTY | 4 cut(s) | 946, 1476, 1786, 1939 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 914, 1623 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2076 |
| XspI | CTAG | 2 cut(s) | 215, 1251 |
| ZrmI | AGTACT | 1 cut(s) | 2076 |
| Zsp2I | ATGCAT | 2 cut(s) | 486, 1102 |