Rh2DG413800

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0005735
Physical Location & Seq
Reverse (-)
60128248 .. 60132319
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG413800.1

Sequence Viewer

Length: 2058 bp
ATGGCTACGGTGGGGGAGGAAGATGTGGAGTACGACAGTGATCCAGAGGAGGTTAAACGATCGCTGGCGATGAGGAGGCGGGCGGCGGCGAGCGACGATGAGGAAGGTGAAGGAGAGGGGAGGGAGAAATCGAGGCCGGATCGGAGGGCTCCCATTCACTCTGATGATGAATCGGATGATCAGGGTGGGGCAGCGGAGTATGATGACGACGAAGAATTGGTAGAAGACGAAGAAGAAGAAGAGATTGATGAGGAAGAAGAAGAGCCGTTTCAGGAGGCCGCCTATGTGGAGAGAGGGCGTGAAGGTGAGACTAGGACTGAGGTTTTGGCGGTGAAGGAATCGGATGGCGGTGACGGGACGAGGTCTGTGGATGGAACGGTGGATGAGCATGGAGAGAATCAGGCCGGAGAAGGTGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGAATGAACCCTTTGCAGTGCCCACAGCTGGGGCGTTCTATATGCATGATGACCGATTCAGGGACAATGCCGGTGGTCGGAACAGGCGAACACATGGTGGAAGGAAGCTATGGGAGTCTAAAGATGACAGGAAGTGGGGGCATGACAAGTTTGAGGAGATAACTTTGCACGAAAGGCACCACGAAGAGGGCAGGAGACCTTCTAGGGGAAATTTTCGGGGTAGAGGAAGAAACCGAGGTATTGATCGTGGGTTCGCTACAGGAAACAGGTCTAAAGAGTATGAGAATAATAATCAGAGACCGGTACCCAAGGGTGTGAGAGGGAGAGGGCCCAGAAGATATGAACCTGCTTTTAGGAATAACAGACAGACACCTTCCACACAAAATAGACAGTCTGGAAAGCCTGTTGACAAAACTTCACAAACTAATTCAGAGAGGACTTTTGCTCCCCCATCGAATGCAGAATCTGACTCAGTTCCTGCTAGGAAAAATGTCTTTGCATCAAGCCTGAATTCAGCTTCTCCTCCTTTTTATCCATCAGGATCCTCCAATAAGGAGATCAGTCTTAATCAAAAAAGGGATGCACATGCTGGGAGTGCTAAGAGGAATGCTCGTCCATCTGTATCAGAGAATTTTTCTGGGCGACAAACCAATGCATATCTGCGAGGGAAGAATGTAGCTGAATCTGTTGGCGTTGGAATGGAAAAGCTTTATATTGATGATTCGAAGAATCCAGGAGCTGGGAAGACATTGACCACTGTACAAATGCCATCATCTGGGTCTTCAATTGTCAACGCTACTCAACCTTCTCAGTCTAGGGTTCAGGGAAGGGGTGGTGTCACAGGACAGATGAGTTATCGACCTGTCGTTTCTCAGAACCAGATGCCAAGAGCTCCATCACAACAGTTCCATGCTGTTCAGCGTAATCCCGTCCAAAATCGGTCCCAACTAGCTCTTCAAGCTCCTCCCCAGCAGGTGGGACAACGCCCTGGAAGTGGATCTCAAGCCTCCTCTCCACCTAAAACACCTGGAGAAGTTGAACCTGCAGATTCAAGTAAATTTAAAGGTGCACTAGTTGCAAAGGGAAAAGGCAGTGCTCTAGGTAATGGAAGGGGAGCACTTACTTACAATGGGGCTCAGGTTATTGGGGCTTCTGGAGGCATGGGTGTCAATCATGGAGATCAGAACTTTCCTGGGACACCTGCCTTTTTGCCTGTTATGCAATTTGGTGGCCAGCACCCTGGGGGTATGGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCACAACTTGGTGGTGGTATGGGAAATTCTGAAATGACCTGGTTGCCTGTATTAGCGGGTGCTGCAGGAGCTTTAGGGGCTGCCTATTGTCCGCCCTATATTACTGTTGATGGTTCTTATCATGCTCGCCCGTCAGGACAGACATCTGTGGGTTCCTTGAGCAAAGAAAATAATGCAAACAAAACCAATAATGAATGGAAGCCTTCACAAAAGCCTGAAATACTGGGCGATGATTATGGGCAGCGACAAAACAAGCCTCGTAGATATTCACAGATGAATGTCGCCAGTGAAGTTCTTCAAAATAATACGGAGCTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Btz

Protein Analysis

685

Amino Acids

74.32

Weight (kDa)

5.57

Isoelectric Point (pI)

57.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Btz PF09405 114 - 224 4.1e-20 CASC3/Barentsz eIF4AIII binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1405, 1651
Acc36I ACCTGC 4 cut(s) 796, 1405, 1492, 1651
Acc65I GGTACC 1 cut(s) 745
AccB1I GGYRCC 2 cut(s) 618, 745
AccB7I CCANNNNNTGG 4 cut(s) 1181, 1217, 1417, 1745
AciI CCGC 9 cut(s) 79, 83, 86, 194, 279, 329, 348, 1793, 1829
AclWI GGATC 5 cut(s) 35, 147, 978, 991, 1447
AcoI YGGCCR 1 cut(s) 1672
AcsI RAATTY 5 cut(s) 652, 952, 1072, 1499, 1762
AdeI CACNNNGTG 1 cut(s) 539
AfaI GTAC 3 cut(s) 32, 747, 1203
AgeI ACCGGT 1 cut(s) 742
AgsI TTSAA 5 cut(s) 1227, 1400, 1481, 1494, 2036
AhlI ACTAGT 1 cut(s) 1513
AjnI CCWGG 7 cut(s) 1174, 1429, 1468, 1633, 1681, 1720, 1775
AjuI GAANNNNNNNTTGG 2 cut(s) 1380, 1412
Alw21I GWGCWC 4 cut(s) 1336, 1513, 1540, 1561
Alw26I GTCTC 3 cut(s) 302, 631, 733
Alw44I GTGCAC 1 cut(s) 1509
AlwI GGATC 5 cut(s) 35, 147, 978, 991, 1447
AlwNI CAGNNNCTG 3 cut(s) 908, 920, 1181
AoxI GGCC 5 cut(s) 134, 276, 402, 770, 1672
ApaI GGGCCC 1 cut(s) 774
ApaLI GTGCAC 1 cut(s) 1509
ApeKI GCWGC 4 cut(s) 191, 1799, 1817, 1978
ApoI RAATTY 5 cut(s) 652, 952, 1072, 1499, 1762
ArsI GACNNNNNNTTYG 2 cut(s) 307, 339
AsiGI ACCGGT 1 cut(s) 742
Asp700I GAANNNNTTC 1 cut(s) 2031
Asp718I GGTACC 1 cut(s) 745
AspS9I GGNCC 3 cut(s) 770, 771, 1383
AsuHPI GGTGA 5 cut(s) 119, 317, 343, 362, 425
AsuII TTCGAA 1 cut(s) 1166
AvaII GGWCC 1 cut(s) 1383
BaeGI GKGCMC 3 cut(s) 465, 774, 1513
BalI TGGCCA 1 cut(s) 1674
BamHI GGATCC 1 cut(s) 983
BanI GGYRCC 2 cut(s) 618, 745
BanII GRGCYC 4 cut(s) 151, 774, 1336, 1579
BbsI GAAGAC 3 cut(s) 231, 1193, 1215
Bbv12I GWGCWC 4 cut(s) 1336, 1513, 1540, 1561
BbvI GCAGC 4 cut(s) 203, 1786, 1804, 1990
BccI CCATC 8 cut(s) 338, 365, 901, 985, 1066, 1219, 1345, 1841
BceAI ACGGC 1 cut(s) 250
BciT130I CCWGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
BclI TGATCA 1 cut(s) 178
BcoDI GTCTC 3 cut(s) 302, 631, 733
BcuI ACTAGT 1 cut(s) 1513
BfaI CTAG 7 cut(s) 312, 645, 924, 1257, 1391, 1514, 1541
BfmI CTRYAG 3 cut(s) 699, 1485, 1800
BfuAI ACCTGC 4 cut(s) 796, 1405, 1492, 1651
BisI GCNGC 7 cut(s) 84, 87, 192, 279, 1800, 1818, 1979
BlpI GCTNAGC 1 cut(s) 1734
BlsI GCNGC 7 cut(s) 85, 88, 193, 280, 1801, 1819, 1980
Bme1390I CCNGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
Bme18I GGWCC 1 cut(s) 1383
BmgT120I GGNCC 3 cut(s) 770, 771, 1383
BmiI GGNNCC 7 cut(s) 150, 620, 747, 772, 985, 1385, 1891
BmrFI CCNGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
BmrI ACTGGG 1 cut(s) 1970
BmsI GCATC 3 cut(s) 950, 1012, 1314
BmuI ACTGGG 1 cut(s) 1970
BpiI GAAGAC 3 cut(s) 231, 1193, 1215
BplI GAGNNNNNCTC 2 cut(s) 1036, 1068
BpmI CTGGAG 2 cut(s) 1491, 1617
Bpu10I CCTNAGC 1 cut(s) 1578
Bpu1102I GCTNAGC 1 cut(s) 1734
Bpu14I TTCGAA 1 cut(s) 1166
BpuEI CTTGAG 2 cut(s) 1428, 1915
BsaI GGTCTC 2 cut(s) 631, 733
BsaJI CCNNGG 7 cut(s) 676, 750, 1429, 1634, 1681, 1682, 1720
BsaWI WCCGGW 1 cut(s) 742
BsaXI ACNNNNNCTCC 2 cut(s) 871, 901
Bse118I RCCGGY 2 cut(s) 512, 742
Bse1I ACTGG 2 cut(s) 1965, 2022
BseBI CCWGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
BseDI CCNNGG 7 cut(s) 676, 750, 1429, 1634, 1681, 1682, 1720
BseGI GGATG 5 cut(s) 181, 349, 376, 388, 1027
BseMII CTCAG 6 cut(s) 309, 927, 1265, 1328, 1592, 1748
BseNI ACTGG 2 cut(s) 1965, 2022
BseSI GKGCMC 3 cut(s) 465, 774, 1513
BseXI GCAGC 4 cut(s) 203, 1786, 1804, 1990
BseYI CCCAGC 4 cut(s) 470, 1031, 1181, 1410
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 5 cut(s) 136, 278, 404, 772, 1674
BshNI GGYRCC 2 cut(s) 618, 745
BshTI ACCGGT 1 cut(s) 742
BsiEI CGRYCG 1 cut(s) 62
BsiHKAI GWGCWC 4 cut(s) 1336, 1513, 1540, 1561
BsiSI CCGG 4 cut(s) 137, 405, 513, 743
BslFI GGGAC 5 cut(s) 370, 518, 1369, 1434, 1651
BsmAI GTCTC 3 cut(s) 302, 631, 733
BsmFI GGGAC 5 cut(s) 370, 518, 1369, 1434, 1651
BsmI GAATGC 3 cut(s) 904, 1054, 1715
BsnI GGCC 5 cut(s) 136, 278, 404, 772, 1674
Bso31I GGTCTC 2 cut(s) 631, 733
Bsp119I TTCGAA 1 cut(s) 1166
Bsp120I GGGCCC 1 cut(s) 770
Bsp1286I GDGCHC 8 cut(s) 151, 465, 774, 1336, 1513, 1540, 1561, 1579
Bsp1407I TGTACA 1 cut(s) 1201
Bsp143I GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
Bsp1720I GCTNAGC 1 cut(s) 1734
BspACI CCGC 9 cut(s) 79, 83, 86, 194, 279, 329, 348, 1793, 1829
BspANI GGCC 5 cut(s) 136, 278, 404, 772, 1674
BspCNI CTCAG 6 cut(s) 310, 926, 1264, 1327, 1591, 1747
BspLI GGNNCC 7 cut(s) 150, 620, 747, 772, 985, 1385, 1891
BspMAI CTGCAG 2 cut(s) 1489, 1804
BspMI ACCTGC 4 cut(s) 796, 1405, 1492, 1651
BspPI GGATC 5 cut(s) 35, 147, 978, 991, 1447
BspQI GCTCTTC 2 cut(s) 255, 1401
BspT104I TTCGAA 1 cut(s) 1166
BspT107I GGYRCC 2 cut(s) 618, 745
BspTNI GGTCTC 2 cut(s) 631, 733
BsrFI RCCGGY 2 cut(s) 512, 742
BsrGI TGTACA 1 cut(s) 1201
BsrI ACTGG 2 cut(s) 1965, 2022
BssAI RCCGGY 2 cut(s) 512, 742
BssECI CCNNGG 7 cut(s) 676, 750, 1429, 1634, 1681, 1682, 1720
BssMI GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
BssT1I CCWWGG 1 cut(s) 750
Bst2UI CCWGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
Bst4CI ACNGT 7 cut(s) 10, 38, 379, 834, 1201, 1347, 1843
Bst6I CTCTTC 4 cut(s) 234, 255, 621, 1401
BstAPI GCANNNNNTGC 1 cut(s) 1517
BstAUI TGTACA 1 cut(s) 1201
BstBI TTCGAA 1 cut(s) 1166
BstC8I GCNNGC 5 cut(s) 66, 81, 91, 1676, 1864
BstDEI CTNAG 7 cut(s) 318, 913, 1041, 1251, 1314, 1578, 1734
BstF5I GGATG 5 cut(s) 181, 349, 376, 388, 1027
BstKTI GATC 9 cut(s) 43, 62, 142, 181, 688, 986, 1002, 1442, 1624
BstMAI GTCTC 3 cut(s) 302, 631, 733
BstMBI GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
BstMCI CGRYCG 1 cut(s) 62
BstMWI GCNNNNNNNGC 8 cut(s) 616, 1037, 1400, 1517, 1660, 1799, 1805, 1814
BstNI CCWGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
BstNSI RCATGY 1 cut(s) 1031
BstSCI CCNGG 7 cut(s) 1174, 1429, 1468, 1633, 1681, 1720, 1775
BstSFI CTRYAG 3 cut(s) 699, 1485, 1800
BstSLI GKGCMC 3 cut(s) 465, 774, 1513
BstV1I GCAGC 4 cut(s) 203, 1786, 1804, 1990
BstV2I GAAGAC 3 cut(s) 231, 1193, 1215
BstX2I RGATCY 2 cut(s) 983, 1439
BstXI CCANNNNNNTGG 1 cut(s) 1682
BstYI RGATCY 2 cut(s) 983, 1439
BsuRI GGCC 5 cut(s) 136, 278, 404, 772, 1674
BtgZI GCGATG 2 cut(s) 83, 1980
BtsCI GGATG 5 cut(s) 181, 349, 376, 388, 1027
BtsI GCAGTG 2 cut(s) 465, 1540
BtsIMutI CAGTG 5 cut(s) 43, 465, 1197, 1540, 2029
BveI ACCTGC 4 cut(s) 796, 1405, 1492, 1651
Cac8I GCNNGC 5 cut(s) 66, 81, 91, 1676, 1864
CaiI CAGNNNCTG 3 cut(s) 908, 920, 1181
Cfr10I RCCGGY 2 cut(s) 512, 742
Cfr13I GGNCC 3 cut(s) 770, 771, 1383
CsiI ACCWGGT 1 cut(s) 1775
Csp6I GTAC 3 cut(s) 31, 746, 1202
CspAI ACCGGT 1 cut(s) 742
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviQI GTAC 3 cut(s) 31, 746, 1202
DdeI CTNAG 7 cut(s) 318, 913, 1041, 1251, 1314, 1578, 1734
DpnI GATC 9 cut(s) 42, 61, 141, 180, 687, 985, 1001, 1441, 1623
DpnII GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
DraI TTTAAA 1 cut(s) 1504
DraIII CACNNNGTG 1 cut(s) 539
EaeI YGGCCR 1 cut(s) 1672
Eam1104I CTCTTC 4 cut(s) 234, 255, 621, 1401
EarI CTCTTC 4 cut(s) 234, 255, 621, 1401
EciI GGCGGA 1 cut(s) 1818
Ecl136II GAGCTC 1 cut(s) 1334
Eco130I CCWWGG 1 cut(s) 750
Eco24I GRGCYC 4 cut(s) 151, 774, 1336, 1579
Eco31I GGTCTC 2 cut(s) 631, 733
Eco47I GGWCC 1 cut(s) 1383
Eco53kI GAGCTC 1 cut(s) 1334
EcoICRI GAGCTC 1 cut(s) 1334
EcoO109I RGGNCCY 1 cut(s) 770
EcoRI GAATTC 1 cut(s) 952
EcoRII CCWGG 7 cut(s) 1174, 1429, 1468, 1633, 1681, 1720, 1775
EcoT14I CCWWGG 1 cut(s) 750
EcoT22I ATGCAT 2 cut(s) 489, 1099
EcoT38I GRGCYC 4 cut(s) 151, 774, 1336, 1579
ErhI CCWWGG 1 cut(s) 750
FaqI GGGAC 5 cut(s) 370, 518, 1369, 1434, 1651
FauI CCCGC 2 cut(s) 72, 1786
FbaI TGATCA 1 cut(s) 178
Fnu4HI GCNGC 7 cut(s) 84, 87, 192, 279, 1800, 1818, 1979
FokI GGATG 5 cut(s) 188, 356, 383, 395, 1034
FriOI GRGCYC 4 cut(s) 151, 774, 1336, 1579
Fsp4HI GCNGC 7 cut(s) 84, 87, 192, 279, 1800, 1818, 1979
FspBI CTAG 7 cut(s) 312, 645, 924, 1257, 1391, 1514, 1541
GluI GCNGC 7 cut(s) 84, 87, 192, 279, 1800, 1818, 1979
GsaI CCCAGC 4 cut(s) 474, 1035, 1185, 1414
GsuI CTGGAG 2 cut(s) 1491, 1617
HaeIII GGCC 5 cut(s) 136, 278, 404, 772, 1674
HapII CCGG 4 cut(s) 137, 405, 513, 743
HincII GTYRAC 2 cut(s) 850, 1234
HindII GTYRAC 2 cut(s) 850, 1234
HindIII AAGCTT 1 cut(s) 1148
HpaII CCGG 4 cut(s) 137, 405, 513, 743
HphI GGTGA 5 cut(s) 119, 317, 343, 362, 425
Hpy166II GTNNAC 3 cut(s) 850, 1234, 1511
Hpy188III TCNNGA 6 cut(s) 44, 272, 837, 981, 1596, 1872
Hpy8I GTNNAC 3 cut(s) 850, 1234, 1511
Hpy99I CGWCG 2 cut(s) 98, 212
HpyCH4III ACNGT 7 cut(s) 10, 38, 379, 834, 1201, 1347, 1843
HpyF10VI GCNNNNNNNGC 8 cut(s) 616, 1037, 1400, 1517, 1660, 1799, 1805, 1814
HpyF3I CTNAG 7 cut(s) 318, 913, 1041, 1251, 1314, 1578, 1734
KpnI GGTACC 1 cut(s) 749
Ksp22I TGATCA 1 cut(s) 178
Kzo9I GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
LguI GCTCTTC 2 cut(s) 255, 1401
LmnI GCTCC 8 cut(s) 154, 892, 1178, 1339, 1408, 1556, 1805, 2047
Lsp1109I GCAGC 4 cut(s) 203, 1786, 1804, 1990
LweI GCATC 3 cut(s) 950, 1012, 1314
MabI ACCWGGT 1 cut(s) 1775
MaeI CTAG 7 cut(s) 312, 645, 924, 1257, 1391, 1514, 1541
MaeIII GTNAC 2 cut(s) 350, 1279
MalI GATC 9 cut(s) 42, 61, 141, 180, 687, 985, 1001, 1441, 1623
MboI GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
MfeI CAATTG 1 cut(s) 1227
MflI RGATCY 2 cut(s) 983, 1439
MhlI GDGCHC 8 cut(s) 151, 465, 774, 1336, 1513, 1540, 1561, 1579
MlsI TGGCCA 1 cut(s) 1674
MluCI AATT 9 cut(s) 215, 652, 868, 952, 1072, 1227, 1499, 1664, 1762
MluNI TGGCCA 1 cut(s) 1674
MlyI GAGTC 2 cut(s) 566, 905
MmeI TCCRAC 2 cut(s) 500, 1117
Mox20I TGGCCA 1 cut(s) 1674
Mph1103I ATGCAT 2 cut(s) 489, 1099
MroXI GAANNNNTTC 1 cut(s) 2031
MscI TGGCCA 1 cut(s) 1674
MseI TTAA 3 cut(s) 54, 1008, 1503
MslI CAYNNNNRTG 1 cut(s) 162
Msp20I TGGCCA 1 cut(s) 1674
MspA1I CMGCKG 2 cut(s) 194, 470
MspI CCGG 4 cut(s) 137, 405, 513, 743
MspR9I CCNGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
MunI CAATTG 1 cut(s) 1227
Mva1269I GAATGC 3 cut(s) 904, 1054, 1715
MvaI CCWGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
MwoI GCNNNNNNNGC 8 cut(s) 616, 1037, 1400, 1517, 1660, 1799, 1805, 1814
NdeII GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
NlaIV GGNNCC 7 cut(s) 150, 620, 747, 772, 985, 1385, 1891
NmuCI GTSAC 2 cut(s) 350, 1279
NsiI ATGCAT 2 cut(s) 489, 1099
NspI RCATGY 1 cut(s) 1031
NspV TTCGAA 1 cut(s) 1166
PaqCI CACCTGC 2 cut(s) 1405, 1651
PasI CCCWGGG 1 cut(s) 1682
PciSI GCTCTTC 2 cut(s) 255, 1401
PcsI WCGNNNNNNNCGW 1 cut(s) 526
PctI GAATGC 3 cut(s) 904, 1054, 1715
PdmI GAANNNNTTC 1 cut(s) 2031
PfeI GAWTC 9 cut(s) 170, 338, 397, 498, 905, 1124, 1163, 1171, 1490
PflFI GACNNNGTC 1 cut(s) 361
PflMI CCANNNNNTGG 4 cut(s) 1181, 1217, 1417, 1745
PfoI TCCNGGA 1 cut(s) 1174
PinAI ACCGGT 1 cut(s) 742
PkrI GCNGC 7 cut(s) 85, 88, 193, 280, 1801, 1819, 1980
Ple19I CGATCG 1 cut(s) 62
PleI GAGTC 2 cut(s) 565, 905
PpsI GAGTC 2 cut(s) 565, 905
Psp124BI GAGCTC 1 cut(s) 1336
Psp6I CCWGG 7 cut(s) 1174, 1429, 1468, 1633, 1681, 1720, 1775
PspFI CCCAGC 4 cut(s) 470, 1031, 1181, 1410
PspGI CCWGG 7 cut(s) 1174, 1429, 1468, 1633, 1681, 1720, 1775
PspN4I GGNNCC 7 cut(s) 150, 620, 747, 772, 985, 1385, 1891
PspOMI GGGCCC 1 cut(s) 770
PspPI GGNCC 3 cut(s) 770, 771, 1383
PstI CTGCAG 2 cut(s) 1489, 1804
PstNI CAGNNNCTG 3 cut(s) 908, 920, 1181
PsuI RGATCY 2 cut(s) 983, 1439
PsyI GACNNNGTC 1 cut(s) 361
PvuI CGATCG 1 cut(s) 62
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 3 cut(s) 32, 747, 1203
RsaNI GTAC 3 cut(s) 31, 746, 1202
RseI CAYNNNNRTG 1 cut(s) 162
SacI GAGCTC 1 cut(s) 1336
SapI GCTCTTC 2 cut(s) 255, 1401
SaqAI TTAA 3 cut(s) 54, 1008, 1503
SatI GCNGC 7 cut(s) 84, 87, 192, 279, 1800, 1818, 1979
Sau3AI GATC 9 cut(s) 40, 59, 139, 178, 685, 983, 999, 1439, 1621
Sau96I GGNCC 3 cut(s) 770, 771, 1383
SchI GAGTC 2 cut(s) 566, 905
ScrFI CCNGG 7 cut(s) 1176, 1431, 1470, 1635, 1683, 1722, 1777
SduI GDGCHC 8 cut(s) 151, 465, 774, 1336, 1513, 1540, 1561, 1579
SexAI ACCWGGT 1 cut(s) 1775
SfaNI GCATC 3 cut(s) 950, 1012, 1314
SfcI CTRYAG 3 cut(s) 699, 1485, 1800
SfuI TTCGAA 1 cut(s) 1166
SinI GGWCC 1 cut(s) 1383
SmiMI CAYNNNNRTG 1 cut(s) 162
SmlI CTYRAG 2 cut(s) 1443, 1894
SmoI CTYRAG 2 cut(s) 1443, 1894
SpeI ACTAGT 1 cut(s) 1513
Sse9I AATT 9 cut(s) 215, 652, 868, 952, 1072, 1227, 1499, 1664, 1762
SsiI CCGC 9 cut(s) 79, 83, 86, 194, 279, 329, 348, 1793, 1829
SspMI CTAG 7 cut(s) 312, 645, 924, 1257, 1391, 1514, 1541
SstI GAGCTC 1 cut(s) 1336
StyD4I CCNGG 7 cut(s) 1174, 1429, 1468, 1633, 1681, 1720, 1775
StyI CCWWGG 1 cut(s) 750
TaaI ACNGT 7 cut(s) 10, 38, 379, 834, 1201, 1347, 1843
TaqI TCGA 4 cut(s) 131, 896, 1166, 1300
TaqII GACCGA 2 cut(s) 510, 1371
TasI AATT 9 cut(s) 215, 652, 868, 952, 1072, 1227, 1499, 1664, 1762
TatI WGTACW 1 cut(s) 1201
TauI GCSGC 3 cut(s) 86, 89, 281
TfiI GAWTC 9 cut(s) 170, 338, 397, 498, 905, 1124, 1163, 1171, 1490
Tru1I TTAA 3 cut(s) 54, 1008, 1503
Tru9I TTAA 3 cut(s) 54, 1008, 1503
TscAI CASTG 5 cut(s) 43, 465, 1204, 1540, 2029
TseFI GTSAC 2 cut(s) 350, 1279
TseI GCWGC 4 cut(s) 191, 1799, 1817, 1978
Tsp45I GTSAC 2 cut(s) 350, 1279
TspDTI ATGAA 5 cut(s) 183, 462, 798, 1944, 2027
TspRI CASTG 5 cut(s) 43, 465, 1204, 1540, 2029
Tth111I GACNNNGTC 1 cut(s) 361
Van91I CCANNNNNTGG 4 cut(s) 1181, 1217, 1417, 1745
VneI GTGCAC 1 cut(s) 1509
VpaK11BI GGWCC 1 cut(s) 1383
XapI RAATTY 5 cut(s) 652, 952, 1072, 1499, 1762
XceI RCATGY 1 cut(s) 1031
XmnI GAANNNNTTC 1 cut(s) 2031
XspI CTAG 7 cut(s) 312, 645, 924, 1257, 1391, 1514, 1541
Zsp2I ATGCAT 2 cut(s) 489, 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.